Browsing Mutation Sites on Lineage B.1.541


Overview of the global distribution of genome sequences on lineage B.1.541.
Note: Color representation of genome sequence counts.



The temporal dynamics of genome sequence count within lineage B.1.541.
Note: Clicking the "Count" or "Cumulative Count" button toggles the view. Count represents the number of genome sequences per month. Cumulative count represents the accumulated total count up to that month.




Mutation table of lineage B.1.541.
Note: Click on the mutation ID in the table to retrieve the complete annotation information for that mutation.

Mutation ID Lineage name Mutation frequency Gene ID Gene name Genome position DNA mutation Mutation type Protein mutation-1 letter Protein mutation-3 letter
V342 B.1.541 9.78e-1 GU280_gp01_pp1a ORF1ab_pp1a 1059 794C>T missense_variant T265I Thr265Ile
V2595 B.1.541 9.91e-1 GU280_gp01_pp1ab ORF1ab_pp1ab 14408 14144C>T missense_variant P4715L Pro4715Leu
V25 B.1.541 1.33e-2 GU280_gp01_pp1a ORF1ab_pp1a 106 -160C>T upstream_gene_variant None None
V2781 B.1.541 8.44e-2 GU280_gp01_pp1ab ORF1ab_pp1ab 16391 16127C>T missense_variant A5376V Ala5376Val
V2925 B.1.541 4.00e-2 GU280_gp01_pp1ab ORF1ab_pp1ab 17491 17227C>T missense_variant P5743S Pro5743Ser
V2983 B.1.541 9.82e-1 GU280_gp01_pp1ab ORF1ab_pp1ab 17964 17700G>T missense_variant M5900I Met5900Ile
V3100 B.1.541 4.80e-1 GU280_gp01_pp1ab ORF1ab_pp1ab 18651 18387G>T missense_variant E6129D Glu6129Asp
V582 B.1.541 1.33e-2 GU280_gp01_pp1a ORF1ab_pp1a 1962 1697C>T missense_variant A566V Ala566Val
V2116 B.1.541 1.33e-2 GU280_gp01_pp1a ORF1ab_pp1a 11083 10818G>T missense_variant L3606F Leu3606Phe
V3308 B.1.541 2.22e-2 GU280_gp01_pp1ab ORF1ab_pp1ab 20132 19868C>T missense_variant A6623V Ala6623Val
V3484 B.1.541 1.33e-2 GU280_gp01_pp1ab ORF1ab_pp1ab 21304 21040C>A missense_variant R7014S Arg7014Ser
V3486 B.1.541 1.33e-2 GU280_gp01_pp1ab ORF1ab_pp1ab 21305 21041G>A missense_variant R7014H Arg7014His
V3520 B.1.541 1.33e-2 GU280_gp02 S 21575 13C>T missense_variant L5F Leu5Phe
V3576 B.1.541 5.51e-1 GU280_gp02 S 21761 199G>T missense_variant A67S Ala67Ser
V3969 B.1.541 1.00e+0 GU280_gp02 S 23403 1841A>G missense_variant D614G Asp614Gly
V2188 B.1.541 3.73e-1 GU280_gp01_pp1a ORF1ab_pp1a 11417 11152G>T missense_variant V3718F Val3718Phe
V97 B.1.541 9.56e-1 GU280_gp01_pp1a ORF1ab_pp1a 241 -25C>T upstream_gene_variant None None
V4344 B.1.541 1.33e-2 GU280_gp03 ORF3a 25481 89G>A missense_variant R30H Arg30His
V4345 B.1.541 1.78e-2 GU280_gp03 ORF3a 25481 89G>T missense_variant R30L Arg30Leu
V4406 B.1.541 9.96e-1 GU280_gp03 ORF3a 25563 171G>T missense_variant Q57H Gln57His
V2234 B.1.541 1.78e-2 GU280_gp01_pp1a ORF1ab_pp1a 11634 11369G>T missense_variant C3790F Cys3790Phe
V4448 B.1.541 4.00e-2 GU280_gp03 ORF3a 25658 266C>T missense_variant T89I Thr89Ile
V4875 B.1.541 1.33e-2 GU280_gp07 ORF7a 27463 70G>T missense_variant V24F Val24Phe
V5114 B.1.541 1.33e-2 GU280_gp09 ORF8 28005 112C>T missense_variant P38S Pro38Ser
V5134 B.1.541 3.56e-2 GU280_gp09 ORF8 28054 161C>T missense_variant S54L Ser54Leu
V5176 B.1.541 1.69e-1 GU280_gp09 ORF8 28122 229G>T missense_variant G77C Gly77Cys
V5200 B.1.541 4.44e-2 GU280_gp09 ORF8 28209 316G>T stop_gained E106* Glu106*
V5230 B.1.541 1.78e-2 GU280_gp09 ORF8 28254 361A>C missense_variant I121L Ile121Leu
V5432 B.1.541 9.73e-1 GU280_gp10 N 28833 560C>T missense_variant S187L Ser187Leu
V5713 B.1.541 1.78e-2 GU280_gp11 ORF10 29645 88G>T missense_variant V30L Val30Leu
V5807 B.1.541 3.11e-2 GU280_gp02 S 29769 *4385C>T downstream_gene_variant None None
V123 B.1.541 1.78e-2 GU280_gp01_pp1a ORF1ab_pp1a 335 70C>T missense_variant R24C Arg24Cys
V1449 B.1.541 1.33e-2 GU280_gp01_pp1a ORF1ab_pp1a 6416 6151G>A missense_variant V2051I Val2051Ile
V1454 B.1.541 2.22e-2 GU280_gp01_pp1a ORF1ab_pp1a 6441 6176A>G missense_variant K2059R Lys2059Arg
V411 B.1.541 4.98e-1 GU280_gp01_pp1a ORF1ab_pp1a 1326 1061C>T missense_variant A354V Ala354Val
V1529 B.1.541 1.33e-2 GU280_gp01_pp1a ORF1ab_pp1a 6695 6430C>T missense_variant P2144S Pro2144Ser
V1568 B.1.541 2.22e-2 GU280_gp01_pp1a ORF1ab_pp1a 6926 6661C>T missense_variant P2221S Pro2221Ser
V1752 B.1.541 1.33e-2 GU280_gp01_pp1a ORF1ab_pp1a 8264 7999G>T missense_variant G2667C Gly2667Cys
V2450 B.1.541 1.33e-2 GU280_gp01_pp1a ORF1ab_pp1a 13452 13187C>T missense_variant A4396V Ala4396Val
V6265 B.1.541 9.96e-1 GU280_gp01_pp1a ORF1ab_pp1a 3037 2772C>T synonymous_variant F924F Phe924Phe
V7184 B.1.541 9.73e-1 GU280_gp01_pp1a ORF1ab_pp1a 10153 9888T>C synonymous_variant D3296D Asp3296Asp
V8047 B.1.541 1.69e-1 GU280_gp01_pp1ab ORF1ab_pp1ab 16954 16690C>T synonymous_variant L5564L Leu5564Leu
V9188 B.1.541 9.87e-1 GU280_gp03 ORF3a 25680 288C>T synonymous_variant L96L Leu96Leu
V9203 B.1.541 9.82e-1 GU280_gp03 ORF3a 25797 405C>T synonymous_variant S135S Ser135Ser
V8591 B.1.541 5.51e-1 GU280_gp01_pp1ab ORF1ab_pp1ab 21255 20991G>C synonymous_variant A6997A Ala6997Ala
V8812 B.1.541 5.24e-1 GU280_gp02 S 22993 1431C>T synonymous_variant S477S Ser477Ser
V6676 B.1.541 1.73e-1 GU280_gp01_pp1a ORF1ab_pp1a 6196 5931C>T synonymous_variant P1977P Pro1977Pro
V9557 B.1.541 1.69e-1 GU280_gp09 ORF8 28253 360C>T synonymous_variant F120F Phe120Phe
V8882 B.1.541 1.78e-2 GU280_gp02 S 23536 1974C>T synonymous_variant N658N Asn658Asn
V8212 B.1.541 4.44e-2 GU280_gp01_pp1ab ORF1ab_pp1ab 18171 17907C>T synonymous_variant G5969G Gly5969Gly
V5940 B.1.541 4.00e-2 GU280_gp01_pp1a ORF1ab_pp1a 832 567C>T synonymous_variant N189N Asn189Asn
V9463 B.1.541 4.44e-2 GU280_gp07 ORF7a 27630 237C>T synonymous_variant A79A Ala79Ala
V6461 B.1.541 4.00e-2 GU280_gp01_pp1a ORF1ab_pp1a 4582 4317C>T synonymous_variant N1439N Asn1439Asn
V7099 B.1.541 2.22e-2 GU280_gp01_pp1a ORF1ab_pp1a 9532 9267C>T synonymous_variant F3089F Phe3089Phe
V9159 B.1.541 2.22e-2 GU280_gp03 ORF3a 25521 129C>T synonymous_variant F43F Phe43Phe
V8902 B.1.541 1.33e-2 GU280_gp02 S 23635 2073C>T synonymous_variant S691S Ser691Ser
V5977 B.1.541 1.33e-2 GU280_gp01_pp1a ORF1ab_pp1a 1060 795C>T synonymous_variant T265T Thr265Thr
V7848 B.1.541 1.33e-2 GU280_gp01_pp1ab ORF1ab_pp1ab 15396 15132C>T synonymous_variant F5044F Phe5044Phe
V7950 B.1.541 1.78e-2 GU280_gp01_pp1ab ORF1ab_pp1ab 16221 15957G>A synonymous_variant P5319P Pro5319Pro
V6026 B.1.541 2.22e-2 GU280_gp01_pp1a ORF1ab_pp1a 1420 1155C>T synonymous_variant A385A Ala385Ala
V8497 B.1.541 1.33e-2 GU280_gp01_pp1ab ORF1ab_pp1ab 20451 20187C>T synonymous_variant N6729N Asn6729Asn
V7830 B.1.541 1.33e-2 GU280_gp01_pp1ab ORF1ab_pp1ab 15240 14976C>T synonymous_variant N4992N Asn4992Asn
V6689 B.1.541 1.33e-2 GU280_gp01_pp1a ORF1ab_pp1a 6286 6021C>T synonymous_variant T2007T Thr2007Thr
V6934 B.1.541 3.11e-2 GU280_gp01_pp1a ORF1ab_pp1a 8251 7986C>T synonymous_variant D2662D Asp2662Asp
V8896 B.1.541 1.78e-2 GU280_gp02 S 23602 2040T>C synonymous_variant S680S Ser680Ser
V7446 B.1.541 2.22e-2 GU280_gp01_pp1a ORF1ab_pp1a 12250 11985A>T synonymous_variant A3995A Ala3995Ala