Browsing Mutation Sites on Lineage V.1


Overview of the global distribution of genome sequences on lineage V.1.
Note: Color representation of genome sequence counts.



The temporal dynamics of genome sequence count within lineage V.1.
Note: Clicking the "Count" or "Cumulative Count" button toggles the view. Count represents the number of genome sequences per month. Cumulative count represents the accumulated total count up to that month.




Mutation table of lineage V.1.
Note: Click on the mutation ID in the table to retrieve the complete annotation information for that mutation.

Mutation ID Lineage name Mutation frequency Gene ID Gene name Genome position DNA mutation Mutation type Protein mutation-1 letter Protein mutation-3 letter
V2595 V.1 1.00e+0 GU280_gp01_pp1ab ORF1ab_pp1ab 14408 14144C>T missense_variant P4715L Pro4715Leu
V45 V.1 1.11e-1 GU280_gp01_pp1a ORF1ab_pp1a 173 -93C>T upstream_gene_variant None None
V69 V.1 8.89e-1 GU280_gp01_pp1a ORF1ab_pp1a 204 -62G>T upstream_gene_variant None None
V3748 V.1 9.33e-1 GU280_gp02 S 22227 665C>T missense_variant A222V Ala222Val
V3969 V.1 1.00e+0 GU280_gp02 S 23403 1841A>G missense_variant D614G Asp614Gly
V97 V.1 8.89e-1 GU280_gp01_pp1a ORF1ab_pp1a 241 -25C>T upstream_gene_variant None None
V2207 V.1 1.33e-1 GU280_gp01_pp1a ORF1ab_pp1a 11514 11249C>T missense_variant T3750I Thr3750Ile
V4529 V.1 9.78e-1 GU280_gp03 ORF3a 25879 487G>A missense_variant V163I Val163Ile
V5014 V.1 2.00e-1 GU280_gp08 ORF7b 27769 14C>T missense_variant S5L Ser5Leu
V5337 V.1 6.67e-2 GU280_gp10 N 28436 163G>T missense_variant A55S Ala55Ser
V5505 V.1 1.00e+0 GU280_gp10 N 28932 659C>T missense_variant A220V Ala220Val
V2339 V.1 4.44e-2 GU280_gp01_pp1a ORF1ab_pp1a 12525 12260C>T missense_variant T4087I Thr4087Ile
V5713 V.1 9.78e-1 GU280_gp11 ORF10 29645 88G>T missense_variant V30L Val30Leu
V929 V.1 2.22e-1 GU280_gp01_pp1a ORF1ab_pp1a 3411 3146C>T missense_variant A1049V Ala1049Val
V979 V.1 8.89e-2 GU280_gp01_pp1a ORF1ab_pp1a 3587 3322C>T missense_variant H1108Y His1108Tyr
V1260 V.1 4.44e-2 GU280_gp01_pp1a ORF1ab_pp1a 5178 4913C>T missense_variant T1638I Thr1638Ile
V1278 V.1 2.00e-1 GU280_gp01_pp1a ORF1ab_pp1a 5310 5045C>T missense_variant T1682I Thr1682Ile
V5866 V.1 1.00e+0 GU280_gp01_pp1a ORF1ab_pp1a 445 180T>C synonymous_variant V60V Val60Val
V6260 V.1 1.33e-1 GU280_gp01_pp1a ORF1ab_pp1a 2992 2727T>C synonymous_variant D909D Asp909Asp
V6265 V.1 1.00e+0 GU280_gp01_pp1a ORF1ab_pp1a 3037 2772C>T synonymous_variant F924F Phe924Phe
V6687 V.1 1.11e-1 GU280_gp01_pp1a ORF1ab_pp1a 6274 6009T>C synonymous_variant Y2003Y Tyr2003Tyr
V6689 V.1 1.00e+0 GU280_gp01_pp1a ORF1ab_pp1a 6286 6021C>T synonymous_variant T2007T Thr2007Thr
V7119 V.1 1.00e+0 GU280_gp01_pp1a ORF1ab_pp1a 9745 9480C>T synonymous_variant Y3160Y Tyr3160Tyr
V8265 V.1 3.56e-1 GU280_gp01_pp1ab ORF1ab_pp1ab 18555 18291C>T synonymous_variant D6097D Asp6097Asp
V8591 V.1 9.33e-1 GU280_gp01_pp1ab ORF1ab_pp1ab 21255 20991G>C synonymous_variant A6997A Ala6997Ala
V8799 V.1 9.11e-1 GU280_gp02 S 22858 1296C>T synonymous_variant C432C Cys432Cys
V8906 V.1 1.00e+0 GU280_gp02 S 23644 2082C>T synonymous_variant A694A Ala694Ala
V9138 V.1 1.11e-1 GU280_gp03 ORF3a 25413 21C>T synonymous_variant I7I Ile7Ile
V9211 V.1 9.78e-1 GU280_gp03 ORF3a 25878 486T>C synonymous_variant S162S Ser162Ser
V9212 V.1 9.78e-1 GU280_gp03 ORF3a 25881 489A>T synonymous_variant V163V Val163Val
V9322 V.1 1.00e+0 GU280_gp05 M 26801 279C>G synonymous_variant L93L Leu93Leu
V9511 V.1 1.00e+0 GU280_gp09 ORF8 27944 51C>T synonymous_variant H17H His17His
V7155 V.1 1.11e-1 GU280_gp01_pp1a ORF1ab_pp1a 9967 9702C>T synonymous_variant L3234L Leu3234Leu
V9647 V.1 1.33e-1 GU280_gp10 N 28717 444C>T synonymous_variant T148T Thr148Thr
V5941 V.1 4.44e-2 GU280_gp01_pp1a ORF1ab_pp1a 835 570C>T synonymous_variant F190F Phe190Phe
V7419 V.1 4.44e-2 GU280_gp01_pp1a ORF1ab_pp1a 12068 11803C>T synonymous_variant L3935L Leu3935Leu
V8518 V.1 4.44e-2 GU280_gp01_pp1ab ORF1ab_pp1ab 20670 20406G>A synonymous_variant A6802A Ala6802Ala
V9748 V.1 4.44e-2 GU280_gp10 N 29200 927C>T synonymous_variant P309P Pro309Pro
V7676 V.1 4.44e-2 GU280_gp01_pp1ab ORF1ab_pp1ab 14118 13854G>A synonymous_variant T4618T Thr4618Thr
V7062 V.1 4.44e-2 GU280_gp01_pp1a ORF1ab_pp1a 9223 8958C>T synonymous_variant H2986H His2986His