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The current mutation

ID: V1377
DNA: 5776G>T
Protein: D1926Y
Position: 6041








COV2Var annotation categories







Summary information of mutation (5776G>T)

Basic Information about Mutation.

  Gene Information   Gene ID   GU280_gp01_pp1a
  Gene Name   ORF1ab_pp1a
  Gene Type   protein_coding
  Genome position   6041
  Reference genome   GenBank ID: NC_045512.2
  Mutation type   missense_variant
  DNA Level   DNA Mutation: 5776G>T
  Ref Seq: G
  Mut Seq: T
  Protein Level   Protein 1-letter Mutation: D1926Y
  Protein 3-letter Mutation: Asp1926Tyr

Overview of the genomic positions of Mutation.
Note: The annotated 12 genes were retrieved from GeneBank (Accession: NC_045512.2). "MP" represents genomic position of mutation.





Analyzing the distribution of mutation (5776G>T) across geographic regions, temporal trends, and lineages

The count of genome sequences harboring this mutation and its distribution across global regions offer insights into regional variations.
Note: The distribution of mutation across 218 geographical regions. Color representation of genome sequence counts. The data is obtained from GISAID's metadata, specifically capturing the regional distribution of genomic sequences.



The dynamic count of genome sequences containing this mutation over time.
Note: Clicking the "Count" or "Cumulative Count" button toggles the view. Count represents the number of genome sequences per month. Cumulative count represents the accumulated total count up to the respective month. The data is obtained from GISAID's metadata, specifically capturing the collection date of genomic sequences.



For every time point represented in the graph above, identifying the top 3 lineages with the highest count of genome sequences carrying this mutation aids in pinpointing noteworthy lineages for further analysis.
Note: Users can filter the lineages by entering a "Year-Month" term in the search box. For example, entering 2020-01 will display lineages that appeared in January 2020. The data is obtained from GISAID's metadata, specifically capturing the collection date of genomic sequences.

Collection date Lineage Total lineage monthly counts Lineage-specific monthly counts Lineage-specific monthly frequency
2020-12 B.1.258 2 1 5.00e-1
2020-12 B.1.36 2 1 5.00e-1
2020-03 B.1.1 1 1 1.00e+0
2020-04 B.1 1 1 1.00e+0
2020-07 B.1.1.306 3 1 3.33e-1
2020-07 B.1.326 3 1 3.33e-1
2020-07 B.1.36.16 3 1 3.33e-1
2020-09 B.1.36.16 1 1 1.00e+0
2021-01 A.27 4 1 2.50e-1
2021-01 B.1.1.222 4 1 2.50e-1
2021-01 B.1.177.65 4 1 2.50e-1
2021-10 AY.125 8 3 3.75e-1
2021-10 AY.34 8 2 2.50e-1
2021-10 AY.127 8 1 1.25e-1
2021-11 B.1.617.2 6 2 3.33e-1
2021-11 AY.125 6 1 1.67e-1
2021-11 AY.127 6 1 1.67e-1
2021-12 B.1.617.2 32 7 2.19e-1
2021-12 AY.125 32 4 1.25e-1
2021-12 AY.112 32 3 9.38e-2
2021-02 B.1.427 9 6 6.67e-1
2021-02 B.1.1.7 9 2 2.22e-1
2021-02 B.1.575 9 1 1.11e-1
2021-03 B.1.1.7 9 8 8.89e-1
2021-03 B.1.427 9 1 1.11e-1
2021-04 B.1.1.7 4 3 7.50e-1
2021-04 B.1.637 4 1 2.50e-1
2021-05 AY.9.2 13 7 5.38e-1
2021-05 AY.127 13 2 1.54e-1
2021-05 AY.120.2 13 1 7.69e-2
2021-06 B.1.1.7 3 3 1.00e+0
2021-07 B.1.617.2 13 10 7.69e-1
2021-07 AY.100 13 1 7.69e-2
2021-07 AY.125 13 1 7.69e-2
2021-08 AY.103 13 4 3.08e-1
2021-08 AY.125 13 3 2.31e-1
2021-08 AY.29 13 2 1.54e-1
2021-09 AY.125 7 5 7.14e-1
2021-09 AY.103 7 1 1.43e-1
2021-09 AY.106 7 1 1.43e-1
2022-01 BA.2.10.2 377 210 5.57e-1
2022-01 BA.1.1 377 46 1.22e-1
2022-01 BA.2.78 377 35 9.28e-2
2022-12 BQ.1.23 1 1 1.00e+0
2022-02 BA.2.10.2 41 20 4.88e-1
2022-02 BA.2.78 41 9 2.20e-1
2022-02 BA.2 41 6 1.46e-1
2022-03 BA.1.1 3 2 6.67e-1
2022-03 BA.2.78 3 1 3.33e-1
2022-05 BA.2 2 2 1.00e+0
2022-06 BA.2 1 1 1.00e+0
2022-07 BA.5 4 3 7.50e-1
2022-07 BA.2.12.2 4 1 2.50e-1
2022-08 BA.5 2 1 5.00e-1
2022-08 BA.5.2.9 2 1 5.00e-1
2022-09 BA.5 2 2 1.00e+0
2023-01 BQ.1.23 1 1 1.00e+0

The count of genome sequences and the frequency of this mutation in each lineage.
Note: Displaying mutation frequencies (>0.01) among 2,735 lineages. Mutation Count represents the count of sequences carrying this mutation. Users can filter the lineages by entering a search term in the search box. For example, entering "A.1" will display A.1 lineages. The data is obtained from GISAID's metadata, specifically capturing the lineage of genomic sequences. Mutation count: Count of sequences carrying this mutation.

Mutation ID Lineage Mutation frequency Mutation count Earliest lineage emergence Latest lineage emergence
V1377 BA.2.10.2 1.07e-1 232 2021-12-30 2022-8-19
V1377 BA.2.10.3 4.40e-2 11 2021-12-26 2022-7-21
V1377 BA.2.78 1.24e-1 46 2021-10-20 2022-8-17






Examining mutation (5776G>T) found in abundant sequences of non-human animal hosts

Exploring mutation presence across 35 non-human animal hosts for cross-species transmission.
Note: We retained the mutation that appear in at least three non-human animal hosts' sequences. The data is obtained from GISAID's metadata, specifically capturing the host of genomic sequences.

Animal host Lineage Source region Collection date Accession ID




Association between mutation (5776G>T) and patients of different ages, genders, and statuses

Note: The logistic regression model was employed to examine changes in patient data before and after the mutation. The logistic regression model was conducted using the glm function in R. The data is obtained from GISAID's metadata, specifically capturing the patient status, gender, and age of genomic sequences.

Analyzing the association between mutation and patient status.
Note: we categorized the data into different patient statuses (ambulatory, deceased, homebound, hospitalized, mild, and recovered) based on GISAID classifications. In the analysis exploring the association between mutation and patient status, the model included mutation, patient status, patient age, gender, sequence region of origin, and sequence collection time point. In the 'increase' direction of the mutation, it means that when this mutation occurs, it increases the corresponding effect proportion. In the 'decrease' direction of the mutation, it means that when this mutation occurs, it decreases the corresponding effect proportion. A p-value lower than 0.001 signifies a notable differentiation between the population with and without the mutation.

Attribute Effect Estimate SE Z-value P-value Direction
Patient status Ambulatory -3.13e-14 3.43e+5 -9.11e-20 1.00e+0 Decrease
Deceased 2.97e-14 3.43e+5 8.64e-20 1.00e+0 Increase
Homebound 2.97e-14 3.43e+5 8.64e-20 1.00e+0 Increase
Hospitalized 2.97e-14 3.43e+5 8.64e-20 1.00e+0 Increase
Mild -5.11e+1 3.43e+5 -1.49e-4 1.00e+0 Decrease
Recovered 5.11e+1 3.43e+5 1.49e-4 1.00e+0 Increase

Analyzing the association between mutation and patient status.
Note: we categorized the data into different patient age (0-17, 18-39, 40-64, 65-84, and 85+). In the analysis exploring the association between mutation and patient age, the model included mutation, patient age, gender, sequence region of origin, and sequence collection time point. In the 'increase' direction of the mutation, it means that when this mutation occurs, it increases the corresponding effect proportion. In the 'decrease' direction of the mutation, it means that when this mutation occurs, it decreases the corresponding effect proportion. A p-value lower than 0.001 signifies a notable differentiation between the population with and without the mutation.

Attribute Effect Estimate SE Z-value P-value Direction
Patient age, years 0-17 -1.70e+1 6.31e+2 -2.70e-2 9.78e-1 Decrease
18-39 8.23e-1 2.30e-1 3.58e+0 3.38e-4 Increase
40-64 -2.18e-1 2.40e-1 -9.08e-1 3.64e-1 Decrease
65-84 -2.04e+0 6.56e-1 -3.11e+0 1.87e-3 Decrease
>=85 -1.66e+1 1.03e+3 -1.60e-2 9.87e-1 Decrease

Analyzing the association between mutation and patient status.
Note: we categorized the data into different patient gender (male and female). In the analysis exploring the association between mutation and patient gender, the model included mutation, patient gender, patient age, sequence region of origin, and sequence collection time point. In the 'increase' direction of the mutation, it means that when this mutation occurs, it increases the corresponding effect proportion. In the 'decrease' direction of the mutation, it means that when this mutation occurs, it decreases the corresponding effect proportion. A p-value lower than 0.001 signifies a notable differentiation between the population with and without the mutation.

Attribute Effect Estimate SE Z-value P-value Direction
Patient gender Male -8.16e-2 2.21e-1 -3.69e-1 7.12e-1 Decrease





Investigating natural selection at mutation (5776G>T) site for genetic adaptation and diversity

Note: Investigating the occurrence of positive selection or negative selection at this mutation site reveals implications for genetic adaptation and diversity.

The MEME method within the HyPhy software was employed to analyze positive selection. MEME: episodic selection.
Note: List of sites found to be under episodic selection by MEME (p < 0.05). "Protein Start" corresponds to the protein's starting genomic position. "Protein End" corresponds to the protein's ending genomic position. The term 'site' represents a selection site within the protein.

Protein name Protein start Protein end Protein length Site P-value Lineage Method
nsp3 2720 8554 1945 1108 0.00e+0 AY.122 MEME

The FEL method within the HyPhy software was employed to analyze both positive and negative selection. FEL: pervasive selection on samll datasets.
Note: List of sites found to be under pervasive selection by FEL (p < 0.05). A beta value greater than alpha signifies positive selection, while a beta value smaller than alpha signifies negative selection. "Protein Start" corresponds to the protein's starting genomic position. "Protein End" corresponds to the protein's ending genomic position. The term 'site' represents a selection site within the protein.

Protein name Protein start Protein end Protein length Site Alpha Beta P-value Lineage Method
nsp3 2720 8554 1945 1108 33.61 0.00 3.00e-2 BA.5.2.26 FEL
nsp3 2720 8554 1945 1108 23.44 0.00 3.00e-2 A FEL
nsp3 2720 8554 1945 1108 383.32 0.00 0.00e+0 AY.58 FEL

The FUBAR method within the HyPhy software was employed to analyze both positive and negative selection. FUBAR: pervasive selection on large datasets.
Note: List of sites found to be under pervasive selection by FUBAR (prob > 0.95). A prob[alpha < beta] value exceeding 0.95 indicates positive selection, while a prob[alpha > beta] value exceeding 0.95 indicates negative selection. "Protein Start" corresponds to the protein's starting genomic position. "Protein End" corresponds to the protein's ending genomic position. The term 'site' represents a selection site within the protein.

Protein name Protein start Protein end Protein length Site Prob[alpha>beta] Prob[alpha<beta] Lineage Method
nsp3 2720 8554 1945 1108 9.80e-1 1.00e-2 BA.5.2.26 FUBAR
nsp3 2720 8554 1945 1108 9.90e-1 1.00e-2 A FUBAR
nsp3 2720 8554 1945 1108 9.80e-1 0.00e+0 AY.58 FUBAR




Alterations in protein physicochemical properties induced by mutation (5776G>T)

Understanding the alterations in protein physicochemical properties can reveal the evolutionary processes and adaptive changes of viruses
Note: ProtParam software was used for the analysis of physicochemical properties. Significant change threshold: A change exceeding 10% compared to the reference is considered a significant change. "GRAVY" is an abbreviation for "grand average of hydropathicity".

Group Protein name Molecular weight Theoretical PI Extinction coefficients Aliphatic index GRAVY
Mutation ORF1ab_pp1a 490037 6.05 545040 88.99 -0.023
Reference ORF1ab_pp1a 489988.91 6.04 543550 88.99 -0.023




Alterations in protein stability induced by mutation (5776G>T)

The impact of mutations on protein stability directly or indirectly affects the biological characteristics, adaptability, and transmission capacity of the virus
Note: iMutant 2.0 was utilized to analyze the effects of mutations on protein stability. pH 7 and a temperature of 25°C are employed to replicate the in vitro environment. pH 7.4 and a temperature of 37°C are utilized to simulate the in vivo environment.

Mutation Protein name Mutation type Position ΔDDG Stability pH Temperature Condition
D1926Y ORF1ab_pp1a Point 1926 0.13 Increase 7 25 Environment
D1926Y ORF1ab_pp1a Point 1926 0.25 Increase 7.4 37 Internal




Impact on protein function induced by mutation (5776G>T)

The impact of mutations on protein function
Note: The MutPred2 software was used to predict the pathogenicity of a mutation and gives the molecular mechanism of pathogenicity. A score above 0.5 indicates an increased likelihood of pathogenicity. "Pr" is the abbreviation for "proportion. P" is the abbreviation for "p-value.

Mutation Protein name Mutation type Score Molecular mechanisms
D1926Y ORF1ab_pp1a Point 0.52 Altered PPI_hotspot (Pr = 0.31 | P = 2.2e-03)
Gain of Strand (Pr = 0.28 | P = 0.01)
Altered MoRF (Pr = 0.28 | P = 0.04)
Altered Cytoplasmic_loop (Pr = 0.26 | P = 7.4e-04)
Loss of Acetylation at K1929 (Pr = 0.15 | P = 0.08)
Loss of Proteolytic_cleavage at D1926 (Pr = 0.10 | P = 0.06)
Loss of N-linked_glycosylation at N1922 (Pr = 0.09 | P = 0.01)
Altered Stability (Pr = 0.07 | P = 0.07)
Gain of Sulfation at D1926 (Pr = 0.01 | P = 0.06)




Exploring mutation (5776G>T) distribution within intrinsically disordered protein regions

Intrinsically Disordered Proteins (IDPs) which refers to protein regions that have no unique 3D structure. In viral proteins, mutations in the disordered regions s are critical for immune evasion and antibody escape, suggesting potential additional implications for vaccines and monoclonal therapeutic strategies.
Note: The iupred3 software was utilized for analyzing IDPs. A score greater than 0.5 is considered indicative of an IDP. In the plot, "POS" represents the position of the mutation.





Alterations in enzyme cleavage sites induced by mutation (5776G>T)

Exploring the impact of mutations on the cleavage sites of 28 enzymes.
Note: The PeptideCutter software was used for detecting enzymes cleavage sites. The increased enzymes cleavage sites refer to the cleavage sites in the mutated protein that are added compared to the reference protein. Conversely, the decreased enzymes cleavage sites indicate the cleavage sites in the mutated protein that are reduced compared to the reference protein.

Mutation Protein name Genome position Enzyme name Increased cleavage sites Decreased cleavage sites
D1926Y ORF1ab_pp1a 6041 Chymotrypsin-high specificity ASFYNFKFVC (pos: 1926)
 NA
D1926Y ORF1ab_pp1a 6041 Proteinase K ASFYNFKFVC (pos: 1926)
 NA
D1926Y ORF1ab_pp1a 6041 Asp-N endopeptidase NA
 NASFDNFKFV (pos: 1925)
D1926Y ORF1ab_pp1a 6041 Chymotrypsin-low specificity ASFYNFKFVC (pos: 1926)
 NA
D1926Y ORF1ab_pp1a 6041 Formic acid NA
 ASFDNFKFVC (pos: 1926)
D1926Y ORF1ab_pp1a 6041 Pepsin (pH>2) ASFYNFKFVC (pos: 1926)
 NA
D1926Y ORF1ab_pp1a 6041 Asp-N endopeptidase + N-terminal Glu NA
 NASFDNFKFV (pos: 1925)




Impact of spike protein mutation (5776G>T) on antigenicity and immunogenicity

Investigating the impact of mutations on antigenicity and immunogenicity carries important implications for vaccine design and our understanding of immune responses.
Note: An absolute change greater than 0.0102 (three times the median across sites) in antigenicity score is considered significant. An absolute changegreater than 0.2754 (three times the median across sites) in immunogenicity score is considered significant. The VaxiJen tool was utilized for antigenicity analysis. The IEDB tool was used for immunogenicity analysis. Antigens with a prediction score of more than 0.4 for this tool are considered candidate antigens. MHC I immunogenicity score >0, indicating a higher probability to stimulate an immune response.

Group Protein name Protein region Antigenicity score Immunogenicity score




Impact of mutation (5776G>T) on viral transmissibility by the affinity between RBD and ACE2 receptor

Unraveling the impact of mutations on the interaction between the receptor binding domain (RBD) and ACE2 receptor using deep mutational scanning (DMS) experimental data to gain insights into their effects on viral transmissibility.
Note: The ΔBinding affinity represents the disparity between the binding affinity of a mutation and the reference binding affinity. A positive Δbinding affinity value (Δlog10(KD,app) > 0) signifies an increased affinity between RBD and ACE2 receptor due to the mutation. Conversely, a negative value (Δlog10(KD,app) < 0) indicates a reduced affinity between RBD and ACE2 receptor caused by the mutation. A p-value smaller than 0.05 indicates significance. "Ave mut bind" represents the average binding affinity of this mutation. "Ave ref bind" refers to the average binding affinity at a site without any mutation (reference binding affinity).

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Mutation Protein name Protein region Mutation Position Ave mut bind Ave ref bind ΔBinding affinity P-value Image


The interface between the receptor binding domain (RBD) and ACE2 receptor is depicted in the crystal structure 6JM0.
Note: The structure 6M0J encompasses the RBD range of 333 to 526. The binding sites (403-406, 408, 417, 439, 445-447, 449, 453, 455-456, 473-478, 484-498, and 500-506) on the RBD that interface with ACE2 are indicated in magenta. The binding sites on the RBD that have been identified through the interface footprints experiment. The ACE2 binding sites within the interface are shown in cyan, representing residues within 5Å proximity to the RBD binding sites. The mutation within the RBD range of 333 to 526 is depicted in red.

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        Show interface residues:





Impact of mutation (5776G>T) on immune escape by the affinity between RBD and antibody/serum

By utilizing experimental data from deep mutational scanning (DMS), we can uncover how mutations affect the interaction between the receptor binding domain (RBD) and antibodies/serum. This approach provides valuable insights into strategies for evading the host immune response.
Note: We considered a mutation to mediate strong escape if the escape score exceeded 0.1 (10% of the maximum score of 1). A total of 1,504 antibodies/serum data were collected for this analysis. "Condition name" refers to the name of the antibodies/serum. "Mut escape score" represents the escape score of the mutation in that specific condition. "Avg mut escape score" indicates the average escape score of the mutation site in that condition, considering the occurrence of this mutation and other mutations. Class 1 antibodies bind to an epitope only in the RBD “up” conformation, and are the most abundant. Class 2 antibodies bind to the RBD both in “up” and “down” conformations. Class 3 and class 4 antibodies both bind outside the ACE2 binding site. Class 3 antibodies bind the RBD in both the open and closed conformation, while class 4 antibodies bind only in the open conformation.

Mutation Condition name Condition type Condition subtype Condition year Mut escape score Avg mut escape score




Investigating the co-mutation patterns of mutation (5776G>T) across 2,735 viral lineages

Investigating the co-mutation patterns of SARS-CoV-2 across 2,735 viral lineages to unravel the cooperative effects of different mutations. In biological research, correlation analysis of mutation sites helps us understand whether there is a close relationship or interaction between certain mutations.
Note: The Spearman correlation coefficient is used to calculate the correlation between two mutations within each Pango lineage. Holm–Bonferroni method was used for multiple test adjustment. We retained mutation pairs with correlation values greater than 0.6 or less than -0.6 and Holm–Bonferroni corrected p-values less than 0.05.

Associated mutation ID DNA mutation Mutation type Protein name Protein mutation correlation coefficient Lineage
V1002 3424G>T stop_gained ORF1ab_pp1a E1142* 9.29e-1 BA.1.1
V1026 3509G>T missense_variant ORF1ab_pp1a R1170L 9.02e-1 BA.1.1
V103 -20G>T upstream_gene_variant ORF1ab_pp1a None 7.66e-1 BA.1.1
V1047 3610G>T missense_variant ORF1ab_pp1a A1204S 8.62e-1 BA.1.1
V11 -194G>T upstream_gene_variant ORF1ab_pp1a None 7.75e-1 BA.1.1
V111 -10G>T upstream_gene_variant ORF1ab_pp1a None 7.46e-1 BA.1.1
V1133 4127G>T missense_variant ORF1ab_pp1a R1376L 9.49e-1 BA.1.1
V1139 4157G>T missense_variant ORF1ab_pp1a R1386L 9.59e-1 BA.1.1
V1146 4211G>T missense_variant ORF1ab_pp1a R1404L 9.59e-1 BA.1.1
V1159 4318G>T missense_variant ORF1ab_pp1a D1440Y 9.02e-1 BA.1.1
V1164 4391G>T missense_variant ORF1ab_pp1a R1464L 8.50e-1 BA.1.1
V118 28G>T stop_gained ORF1ab_pp1a E10* 9.59e-1 BA.1.1
V120 40G>T missense_variant ORF1ab_pp1a V14F 9.20e-1 BA.1.1
V124 71G>T missense_variant ORF1ab_pp1a R24L 9.11e-1 BA.1.1
V125 73G>T missense_variant ORF1ab_pp1a D25Y 9.39e-1 BA.1.1
V1252 4883G>T missense_variant ORF1ab_pp1a R1628L 8.26e-1 BA.1.1
V126 76G>T missense_variant ORF1ab_pp1a V26L 9.02e-1 BA.1.1
V1298 5248G>T missense_variant ORF1ab_pp1a V1750L 9.11e-1 BA.1.1
V130 82G>T missense_variant ORF1ab_pp1a V28L 8.69e-1 BA.1.1
V132 86G>T missense_variant ORF1ab_pp1a R29L 9.39e-1 BA.1.1
V1345 5548G>T missense_variant ORF1ab_pp1a G1850C 9.20e-1 BA.1.1
V1374 5767G>T missense_variant ORF1ab_pp1a A1923S 9.20e-1 BA.1.1
V139 103G>T missense_variant ORF1ab_pp1a V35L 7.67e-1 BA.1.1
V1409 6032G>T missense_variant ORF1ab_pp1a R2011L 9.59e-1 BA.1.1
V1432 6097G>T missense_variant ORF1ab_pp1a A2033S 9.02e-1 BA.1.1
V1439 6124G>T stop_gained ORF1ab_pp1a E2042* 9.59e-1 BA.1.1
V146 128G>T missense_variant ORF1ab_pp1a R43L 9.11e-1 BA.1.1
V1464 6208G>T stop_gained ORF1ab_pp1a E2070* 9.59e-1 BA.1.1
V1544 6476G>T missense_variant ORF1ab_pp1a R2159L 9.11e-1 BA.1.1
V1546 6488G>T missense_variant ORF1ab_pp1a R2163L 9.39e-1 BA.1.1
V1565 6619G>T missense_variant ORF1ab_pp1a G2207C 7.95e-1 BA.1.1
V1578 6742G>T missense_variant ORF1ab_pp1a A2248S 9.20e-1 BA.1.1
V162 178G>T missense_variant ORF1ab_pp1a V60F 7.61e-1 BA.1.1
V1644 7207G>T missense_variant ORF1ab_pp1a G2403C 9.59e-1 BA.1.1
V1649 7244G>T missense_variant ORF1ab_pp1a R2415L 9.59e-1 BA.1.1
V1651 7264G>T stop_gained ORF1ab_pp1a E2422* 9.59e-1 BA.1.1
V1662 7471G>T missense_variant ORF1ab_pp1a V2491F 9.39e-1 BA.1.1
V168 218G>T missense_variant ORF1ab_pp1a R73L 9.38e-1 BA.1.1
V1712 7783G>T missense_variant ORF1ab_pp1a V2595F 9.59e-1 BA.1.1
V1716 7810G>T missense_variant ORF1ab_pp1a V2604L 9.20e-1 BA.1.1
V1743 7913G>T missense_variant ORF1ab_pp1a R2638L 9.49e-1 BA.1.1
V175 230G>T missense_variant ORF1ab_pp1a R77L 7.83e-1 BA.1.1
V1753 8002G>T missense_variant ORF1ab_pp1a D2668Y 9.59e-1 BA.1.1
V1760 8057G>T missense_variant ORF1ab_pp1a R2686L 9.49e-1 BA.1.1
V1766 8090G>T missense_variant ORF1ab_pp1a R2697L 9.49e-1 BA.1.1
V1774 8143G>T missense_variant ORF1ab_pp1a V2715F 9.49e-1 BA.1.1
V1777 8177G>T missense_variant ORF1ab_pp1a R2726L 9.59e-1 BA.1.1
V1778 8189G>T missense_variant ORF1ab_pp1a R2730L 9.02e-1 BA.1.1
V1819 8453G>T missense_variant ORF1ab_pp1a R2818L 8.85e-1 BA.1.1
V1829 8522G>T missense_variant ORF1ab_pp1a R2841L 9.49e-1 BA.1.1
V1846 8596G>T missense_variant ORF1ab_pp1a V2866L 9.11e-1 BA.1.1
V1857 8624G>T missense_variant ORF1ab_pp1a R2875L 9.49e-1 BA.1.1
V1883 8846G>T missense_variant ORF1ab_pp1a R2949L 9.49e-1 BA.1.1
V1886 8858G>T missense_variant ORF1ab_pp1a R2953L 9.59e-1 BA.1.1
V1900 8959G>T missense_variant ORF1ab_pp1a G2987C 9.49e-1 BA.1.1
V1961 9491G>T missense_variant ORF1ab_pp1a R3164L 8.85e-1 BA.1.1
V1964 9581G>T missense_variant ORF1ab_pp1a R3194L 9.49e-1 BA.1.1
V1979 9703G>T missense_variant ORF1ab_pp1a A3235S 8.07e-1 BA.1.1
V1993 9874G>T missense_variant ORF1ab_pp1a G3292C 9.59e-1 BA.1.1
V1997 9892G>T missense_variant ORF1ab_pp1a V3298L 6.97e-1 BA.1.1
V2005 9968G>T missense_variant ORF1ab_pp1a R3323L 8.62e-1 BA.1.1
V2030 10103G>T missense_variant ORF1ab_pp1a R3368L 9.49e-1 BA.1.1
V2055 10417G>T missense_variant ORF1ab_pp1a A3473S 9.38e-1 BA.1.1
V2060 10454G>T missense_variant ORF1ab_pp1a R3485L 9.49e-1 BA.1.1
V207 277G>T stop_gained ORF1ab_pp1a E93* 9.59e-1 BA.1.1
V2079 10570G>T missense_variant ORF1ab_pp1a V3524F 9.20e-1 BA.1.1
V2087 10625G>T missense_variant ORF1ab_pp1a R3542L 9.59e-1 BA.1.1
V21 -165G>T upstream_gene_variant ORF1ab_pp1a None 7.65e-1 BA.1.1
V212 292G>T missense_variant ORF1ab_pp1a G98C 8.62e-1 BA.1.1
V215 296G>T missense_variant ORF1ab_pp1a R99L 8.77e-1 BA.1.1
V2151 10985G>T missense_variant ORF1ab_pp1a R3662L 7.49e-1 BA.1.1
V2238 11405G>T missense_variant ORF1ab_pp1a R3802L 9.02e-1 BA.1.1
V228 337G>T stop_gained ORF1ab_pp1a E113* 9.59e-1 BA.1.1
V2310 11978G>T missense_variant ORF1ab_pp1a R3993L 9.39e-1 BA.1.1
V2313 11996G>T missense_variant ORF1ab_pp1a R3999L 8.94e-1 BA.1.1
V2358 12449G>T missense_variant ORF1ab_pp1a R4150L 9.59e-1 BA.1.1
V2362 12469G>T missense_variant ORF1ab_pp1a G4157C 9.59e-1 BA.1.1
V2386 12559G>T missense_variant ORF1ab_pp1a D4187Y 9.59e-1 BA.1.1
V239 356G>T missense_variant ORF1ab_pp1a R119L 9.39e-1 BA.1.1
V2406 12752G>T missense_variant ORF1ab_pp1a R4251L 9.59e-1 BA.1.1
V2424 12992G>T missense_variant ORF1ab_pp1a R4331L 9.49e-1 BA.1.1
V243 371G>T missense_variant ORF1ab_pp1a R124L 8.62e-1 BA.1.1
V2438 13114G>T missense_variant ORF1ab_pp1a V4372F 9.49e-1 BA.1.1
V2439 13120G>T missense_variant ORF1ab_pp1a G4374C 7.46e-1 BA.1.1
V2445 13160G>T missense_variant ORF1ab_pp1a R4387L 9.59e-1 BA.1.1
V2446 13162G>T stop_gained ORF1ab_pp1a E4388* 9.59e-1 BA.1.1
V245 379G>T missense_variant ORF1ab_pp1a G127C 8.94e-1 BA.1.1
V2452 13204G>T missense_variant ORF1ab_pp1a G4402W 9.59e-1 BA.1.1
V2453 13213G>T missense_variant ORF1ab_pp1ab G4405C 9.59e-1 BA.1.1
V2456 13229G>T missense_variant ORF1ab_pp1ab R4410L 9.49e-1 BA.1.1
V2459 13243G>T missense_variant ORF1ab_pp1ab G4415C 9.59e-1 BA.1.1
V2463 13267G>T missense_variant ORF1ab_pp1ab V4423L 9.39e-1 BA.1.1
V2470 13340G>T missense_variant ORF1ab_pp1ab R4447L 9.59e-1 BA.1.1
V2474 13357G>T stop_gained ORF1ab_pp1ab E4453* 9.59e-1 BA.1.1
V2496 13498G>T missense_variant ORF1ab_pp1ab G4500C 8.85e-1 BA.1.1
V2500 13523G>T missense_variant ORF1ab_pp1ab R4508L 9.59e-1 BA.1.1
V2503 13529G>T missense_variant ORF1ab_pp1ab R4510L 9.39e-1 BA.1.1
V2507 13558G>T missense_variant ORF1ab_pp1ab V4520F 9.49e-1 BA.1.1
V251 409G>T missense_variant ORF1ab_pp1a G137C 9.02e-1 BA.1.1
V2528 13694G>T missense_variant ORF1ab_pp1ab R4565L 9.29e-1 BA.1.1
V2529 13696G>T missense_variant ORF1ab_pp1ab V4566L 9.20e-1 BA.1.1
V2532 13702G>T missense_variant ORF1ab_pp1ab A4568S 9.59e-1 BA.1.1
V2534 13718G>T missense_variant ORF1ab_pp1ab R4573L 8.77e-1 BA.1.1
V2535 13724G>T missense_variant ORF1ab_pp1ab R4575L 9.59e-1 BA.1.1
V2540 13766G>T missense_variant ORF1ab_pp1ab R4589L 8.40e-1 BA.1.1
V2543 13834G>T missense_variant ORF1ab_pp1ab G4612C 9.59e-1 BA.1.1
V255 412G>T missense_variant ORF1ab_pp1a A138S 9.11e-1 BA.1.1
V257 415G>T missense_variant ORF1ab_pp1a D139Y 8.77e-1 BA.1.1
V2584 14030G>T missense_variant ORF1ab_pp1ab R4677L 8.40e-1 BA.1.1
V2612 14320G>T missense_variant ORF1ab_pp1ab A4774S 9.59e-1 BA.1.1
V2615 14351G>T missense_variant ORF1ab_pp1ab R4784L 9.59e-1 BA.1.1
V2620 14413G>T missense_variant ORF1ab_pp1ab G4805C 9.59e-1 BA.1.1
V2631 14530G>T missense_variant ORF1ab_pp1ab D4844Y 9.59e-1 BA.1.1
V2632 14546G>T missense_variant ORF1ab_pp1ab R4849L 9.49e-1 BA.1.1
V2641 14659G>T missense_variant ORF1ab_pp1ab V4887F 9.59e-1 BA.1.1
V2652 14761G>T missense_variant ORF1ab_pp1ab A4921S 8.07e-1 BA.1.1
V2654 14774G>T missense_variant ORF1ab_pp1ab R4925L 9.49e-1 BA.1.1
V2656 14840G>T missense_variant ORF1ab_pp1ab R4947L 9.49e-1 BA.1.1
V2657 14845G>T missense_variant ORF1ab_pp1ab V4949L 9.29e-1 BA.1.1
V2660 14917G>T missense_variant ORF1ab_pp1ab A4973S 6.54e-1 BA.1.1
V2680 15095G>T missense_variant ORF1ab_pp1ab R5032L 9.59e-1 BA.1.1
V2687 15128G>T missense_variant ORF1ab_pp1ab R5043L 9.29e-1 BA.1.1
V269 439G>T missense_variant ORF1ab_pp1a D147Y 8.69e-1 BA.1.1
V2695 15187G>T missense_variant ORF1ab_pp1ab G5063C 6.12e-1 BA.1.1
V270 442G>T stop_gained ORF1ab_pp1a E148* 9.59e-1 BA.1.1
V2702 15325G>T missense_variant ORF1ab_pp1ab D5109Y 9.02e-1 BA.1.1
V2706 15338G>T missense_variant ORF1ab_pp1ab R5113L 9.49e-1 BA.1.1
V2715 15415G>T missense_variant ORF1ab_pp1ab A5139S 9.39e-1 BA.1.1
V2716 15425G>T missense_variant ORF1ab_pp1ab R5142L 8.62e-1 BA.1.1
V2719 15457G>T missense_variant ORF1ab_pp1ab D5153Y 9.59e-1 BA.1.1
V2743 15697G>T missense_variant ORF1ab_pp1ab G5233C 9.59e-1 BA.1.1
V2745 15718G>T missense_variant ORF1ab_pp1ab V5240L 6.93e-1 BA.1.1
V2746 15749G>T missense_variant ORF1ab_pp1ab R5250L 9.59e-1 BA.1.1
V2747 15754G>T missense_variant ORF1ab_pp1ab V5252L 9.59e-1 BA.1.1
V2772 16034G>T missense_variant ORF1ab_pp1ab R5345L 9.49e-1 BA.1.1
V2796 16273G>T missense_variant ORF1ab_pp1ab D5425Y 8.32e-1 BA.1.1
V2812 16436G>T missense_variant ORF1ab_pp1ab R5479L 9.29e-1 BA.1.1
V2822 16505G>T missense_variant ORF1ab_pp1ab R5502L 9.59e-1 BA.1.1
V2823 16529G>T missense_variant ORF1ab_pp1ab R5510L 9.39e-1 BA.1.1
V2834 16607G>T missense_variant ORF1ab_pp1ab R5536L 9.29e-1 BA.1.1
V285 512G>T missense_variant ORF1ab_pp1a R171L 9.11e-1 BA.1.1
V287 524G>T missense_variant ORF1ab_pp1a R175L 9.29e-1 BA.1.1
V2880 16880G>T missense_variant ORF1ab_pp1ab R5627L 8.77e-1 BA.1.1
V2884 16909G>T missense_variant ORF1ab_pp1ab A5637S 9.59e-1 BA.1.1
V289 535G>T stop_gained ORF1ab_pp1a G179* 9.49e-1 BA.1.1
V2894 16982G>T missense_variant ORF1ab_pp1ab R5661L 9.59e-1 BA.1.1
V2896 16988G>T missense_variant ORF1ab_pp1ab R5663L 9.49e-1 BA.1.1
V29 -142G>T upstream_gene_variant ORF1ab_pp1a None 9.06e-1 BA.1.1
V2919 17173G>T missense_variant ORF1ab_pp1ab D5725Y 9.59e-1 BA.1.1
V2923 17198G>T missense_variant ORF1ab_pp1ab R5733L 9.59e-1 BA.1.1
V2933 17287G>T stop_gained ORF1ab_pp1ab G5763* 9.59e-1 BA.1.1
V2935 17297G>T missense_variant ORF1ab_pp1ab R5766L 8.94e-1 BA.1.1
V2936 17300G>T missense_variant ORF1ab_pp1ab R5767L 9.59e-1 BA.1.1
V2956 17455G>T missense_variant ORF1ab_pp1ab V5819L 9.49e-1 BA.1.1
V296 551G>T missense_variant ORF1ab_pp1a R184L 9.29e-1 BA.1.1
V2960 17477G>T missense_variant ORF1ab_pp1ab R5826L 9.49e-1 BA.1.1
V297 559G>T missense_variant ORF1ab_pp1a D187Y 9.59e-1 BA.1.1
V2992 17753G>T missense_variant ORF1ab_pp1ab R5918L 9.59e-1 BA.1.1
V3039 18002G>T missense_variant ORF1ab_pp1ab R6001L 7.37e-1 BA.1.1
V3040 18004G>T stop_gained ORF1ab_pp1ab E6002* 9.59e-1 BA.1.1
V3045 18026G>T missense_variant ORF1ab_pp1ab R6009L 9.49e-1 BA.1.1
V3048 18043G>T missense_variant ORF1ab_pp1ab D6015Y 9.59e-1 BA.1.1
V3049 18049G>T stop_gained ORF1ab_pp1ab E6017* 9.59e-1 BA.1.1
V3085 18263G>T missense_variant ORF1ab_pp1ab R6088L 9.20e-1 BA.1.1
V3092 18319G>T missense_variant ORF1ab_pp1ab V6107L 6.15e-1 BA.1.1
V3102 18389G>T missense_variant ORF1ab_pp1ab R6130L 9.59e-1 BA.1.1
V3105 18413G>T missense_variant ORF1ab_pp1ab R6138L 8.62e-1 BA.1.1
V311 620G>T missense_variant ORF1ab_pp1a R207L 7.27e-1 BA.1.1
V3115 18481G>T missense_variant ORF1ab_pp1ab V6161F 7.46e-1 BA.1.1
V3130 18625G>T stop_gained ORF1ab_pp1ab E6209* 9.59e-1 BA.1.1
V3135 18641G>T missense_variant ORF1ab_pp1ab R6214L 8.85e-1 BA.1.1
V3187 18943G>T missense_variant ORF1ab_pp1ab D6315Y 7.66e-1 BA.1.1
V321 649G>T stop_gained ORF1ab_pp1a E217* 9.59e-1 BA.1.1
V3216 19202G>T missense_variant ORF1ab_pp1ab R6401L 9.38e-1 BA.1.1
V3220 19261G>T missense_variant ORF1ab_pp1ab D6421Y 6.33e-1 BA.1.1
V3254 19538G>T missense_variant ORF1ab_pp1ab R6513L 9.59e-1 BA.1.1
V3293 19769G>T missense_variant ORF1ab_pp1ab R6590L 9.49e-1 BA.1.1
V332 695G>T missense_variant ORF1ab_pp1a R232L 8.85e-1 BA.1.1
V3331 20027G>T missense_variant ORF1ab_pp1ab R6676L 9.39e-1 BA.1.1
V3334 20053G>T stop_gained ORF1ab_pp1ab E6685* 9.49e-1 BA.1.1
V3338 20062G>T missense_variant ORF1ab_pp1ab V6688F 9.02e-1 BA.1.1
V3345 20126G>T missense_variant ORF1ab_pp1ab R6709L 9.59e-1 BA.1.1
V336 731G>T missense_variant ORF1ab_pp1a R244L 9.59e-1 BA.1.1
V3415 20527G>T missense_variant ORF1ab_pp1ab A6843S 9.59e-1 BA.1.1
V3428 20683G>T missense_variant ORF1ab_pp1ab D6895Y 9.59e-1 BA.1.1
V3444 20791G>T missense_variant ORF1ab_pp1ab D6931Y 9.59e-1 BA.1.1
V3462 20893G>T missense_variant ORF1ab_pp1ab V6965L 9.11e-1 BA.1.1
V3475 20956G>T missense_variant ORF1ab_pp1ab A6986S 6.02e-1 BA.1.1
V3487 21041G>T missense_variant ORF1ab_pp1ab R7014L 9.17e-1 BA.1.1
V3488 21043G>T stop_gained ORF1ab_pp1ab E7015* 9.27e-1 BA.1.1
V3517 -5G>T upstream_gene_variant S None 9.59e-1 BA.1.1
V3562 101G>T missense_variant S R34L 9.08e-1 BA.1.1
V3621 367G>T missense_variant S A123S 9.39e-1 BA.1.1
V370 902G>T missense_variant ORF1ab_pp1a R301L 9.39e-1 BA.1.1
V3737 641G>T missense_variant S R214L 6.49e-1 BA.1.1
V38 -114G>T upstream_gene_variant ORF1ab_pp1a None 8.80e-1 BA.1.1
V3822 1030G>T missense_variant S A344S 8.43e-1 BA.1.1
V3857 1231G>T missense_variant S A411S 7.37e-1 BA.1.1
V3923 1478A>T missense_variant S Q493L 7.38e-1 BA.1.1
V3959 1730G>T missense_variant S R577L 9.39e-1 BA.1.1
V396 1003G>T missense_variant ORF1ab_pp1a D335Y 8.07e-1 BA.1.1
V3985 1901G>T missense_variant S R634L 9.29e-1 BA.1.1
V3991 1937G>T missense_variant S R646L 9.39e-1 BA.1.1
V4005 2014G>T missense_variant S A672S 9.49e-1 BA.1.1
V401 1024G>T stop_gained ORF1ab_pp1a E342* 9.59e-1 BA.1.1
V4025 2045G>T missense_variant S R682L 9.19e-1 BA.1.1
V4026 2048G>T missense_variant S R683L 7.21e-1 BA.1.1
V4029 2054G>T missense_variant S R685L 9.38e-1 BA.1.1
V41 -101G>T upstream_gene_variant ORF1ab_pp1a None 9.09e-1 BA.1.1
V4150 2948G>T missense_variant S R983L 9.49e-1 BA.1.1
V4185 3272G>T missense_variant S R1091L 7.83e-1 BA.1.1
V4235 3554G>T missense_variant S R1185L 9.02e-1 BA.1.1
V4244 3595G>T missense_variant S D1199Y 8.54e-1 BA.1.1
V4302 -6G>T upstream_gene_variant ORF3a None 9.59e-1 BA.1.1
V4345 89G>T missense_variant ORF3a R30L 7.78e-1 BA.1.1
V437 1156G>T stop_gained ORF1ab_pp1a E386* 9.59e-1 BA.1.1
V4379 130G>T stop_gained ORF3a G44* 9.39e-1 BA.1.1
V4391 148G>T missense_variant ORF3a V50F 6.90e-1 BA.1.1
V4410 175G>T missense_variant ORF3a A59S 6.90e-1 BA.1.1
V4459 289G>T missense_variant ORF3a V97F 7.56e-1 BA.1.1
V446 1193G>T missense_variant ORF1ab_pp1a R398L 8.85e-1 BA.1.1
V453 1205G>T missense_variant ORF1ab_pp1a R402L 9.49e-1 BA.1.1
V4614 751G>T missense_variant ORF3a G251C 8.54e-1 BA.1.1
V4620 760G>T stop_gained ORF3a G254* 6.23e-1 BA.1.1
V464 1277G>T missense_variant ORF1ab_pp1a R426L 6.26e-1 BA.1.1
V4672 70G>T missense_variant E V24L 8.28e-1 BA.1.1
V4678 145G>T missense_variant E V49L 6.21e-1 BA.1.1
V469 1285G>T missense_variant ORF1ab_pp1a A429S 9.02e-1 BA.1.1
V4722 16G>T missense_variant M G6C 8.40e-1 BA.1.1
V4757 232G>T missense_variant M G78C 6.53e-1 BA.1.1
V4763 247G>T missense_variant M A83S 7.95e-1 BA.1.1
V4772 320G>T missense_variant M R107L 8.63e-1 BA.1.1
V4784 521G>T missense_variant M R174L 6.53e-1 BA.1.1
V4788 593G>T missense_variant M R198L 7.21e-1 BA.1.1
V4812 59G>T missense_variant ORF6 R20M 7.14e-1 BA.1.1
V484 1330G>T stop_gained ORF1ab_pp1a E444* 9.49e-1 BA.1.1
V4864 37G>T missense_variant ORF7a A13S 8.33e-1 BA.1.1
V4895 121G>T stop_gained ORF7a E41* 7.27e-1 BA.1.1
V4930 208G>T missense_variant ORF7a G70C 7.67e-1 BA.1.1
V4932 211G>T missense_variant ORF7a V71L 6.60e-1 BA.1.1
V4937 220G>T missense_variant ORF7a V74F 7.78e-1 BA.1.1
V4943 233G>T missense_variant ORF7a R78L 8.33e-1 BA.1.1
V5056 127G>T missense_variant ORF7b A43S 6.74e-1 BA.1.1
V5061 -4G>T upstream_gene_variant ORF8 None 6.74e-1 BA.1.1
V511 1420G>T missense_variant ORF1ab_pp1a A474S 8.40e-1 BA.1.1
V5173 223G>T missense_variant ORF8 D75Y 7.55e-1 BA.1.1
V5176 229G>T missense_variant ORF8 G77C 6.90e-1 BA.1.1
V5196 302G>T missense_variant ORF8 R101L 8.62e-1 BA.1.1
V5209 340G>T missense_variant ORF8 V114F 8.77e-1 BA.1.1
V5212 344G>T missense_variant ORF8 R115L 7.78e-1 BA.1.1
V5234 -12G>T upstream_gene_variant N None 9.59e-1 BA.1.1
V5266 29G>T missense_variant N R10L 8.94e-1 BA.1.1
V5277 41G>T missense_variant N R14L 8.77e-1 BA.1.1
V5324 107G>T missense_variant N R36L 7.41e-1 BA.1.1
V5331 119G>T missense_variant N R40L 7.06e-1 BA.1.1
V5337 163G>T missense_variant N A55S 6.07e-1 BA.1.1
V5345 203G>T missense_variant N R68L 7.06e-1 BA.1.1
V5349 214G>T missense_variant N V72F 9.59e-1 BA.1.1
V5355 263G>T missense_variant N R88L 9.29e-1 BA.1.1
V5359 278G>T missense_variant N R93L 8.94e-1 BA.1.1
V5361 284G>T missense_variant N R95L 8.33e-1 BA.1.1
V5364 295G>T missense_variant N G99C 9.02e-1 BA.1.1
V5379 385G>T missense_variant N G129C 9.29e-1 BA.1.1
V5395 446G>T missense_variant N R149L 9.59e-1 BA.1.1
V5404 472G>T missense_variant N V158L 8.62e-1 BA.1.1
V5414 517G>T missense_variant N A173S 8.40e-1 BA.1.1
V5419 535G>T missense_variant N G179C 7.78e-1 BA.1.1
V5429 554G>T missense_variant N R185L 9.11e-1 BA.1.1
V5434 566G>T missense_variant N R189L 7.83e-1 BA.1.1
V5536 776G>T missense_variant N R259L 9.29e-1 BA.1.1
V5537 785G>T missense_variant N R262L 9.49e-1 BA.1.1
V554 1625G>T missense_variant ORF1ab_pp1a R542L 8.01e-1 BA.1.1
V5546 823G>T missense_variant N G275C 9.11e-1 BA.1.1
V5547 830G>T missense_variant N R277L 9.59e-1 BA.1.1
V556 1634G>T missense_variant ORF1ab_pp1a R545L 9.20e-1 BA.1.1
V5565 931G>T missense_variant N A311S 8.85e-1 BA.1.1
V5566 946G>T stop_gained N G316* 9.59e-1 BA.1.1
V5570 956G>T missense_variant N R319L 9.29e-1 BA.1.1
V563 1649G>T missense_variant ORF1ab_pp1a R550L 9.59e-1 BA.1.1
V5688 16G>T missense_variant ORF10 V6F 6.38e-1 BA.1.1
V5690 22G>T missense_variant ORF10 A8S 7.01e-1 BA.1.1
V574 1679G>T missense_variant ORF1ab_pp1a R560L 8.40e-1 BA.1.1
V581 1696G>T missense_variant ORF1ab_pp1a A566S 7.14e-1 BA.1.1
V5875 222G>T synonymous_variant ORF1ab_pp1a S74S 6.97e-1 BA.1.1
V5970 726G>T synonymous_variant ORF1ab_pp1a T242T 7.23e-1 BA.1.1
V5998 921G>T synonymous_variant ORF1ab_pp1a A307A 8.54e-1 BA.1.1
V6010 999G>T synonymous_variant ORF1ab_pp1a T333T 6.64e-1 BA.1.1
V61 -68G>T upstream_gene_variant ORF1ab_pp1a None 8.77e-1 BA.1.1
V6121 1830G>T synonymous_variant ORF1ab_pp1a S610S 8.26e-1 BA.1.1
V6165 2133G>T synonymous_variant ORF1ab_pp1a T711T 8.47e-1 BA.1.1
V643 1933G>T missense_variant ORF1ab_pp1a G645C 8.62e-1 BA.1.1
V6481 4455G>T synonymous_variant ORF1ab_pp1a A1485A 6.01e-1 BA.1.1
V657 1981G>T missense_variant ORF1ab_pp1a G661C 7.83e-1 BA.1.1
V6610 5364G>T synonymous_variant ORF1ab_pp1a T1788T 6.67e-1 BA.1.1
V6634 5592G>T synonymous_variant ORF1ab_pp1a T1864T 7.95e-1 BA.1.1
V6686 6006G>T synonymous_variant ORF1ab_pp1a T2002T 8.69e-1 BA.1.1
V6704 6099G>T synonymous_variant ORF1ab_pp1a A2033A 8.77e-1 BA.1.1
V6765 6585G>T synonymous_variant ORF1ab_pp1a P2195P 7.56e-1 BA.1.1
V6908 7791G>T synonymous_variant ORF1ab_pp1a T2597T 8.85e-1 BA.1.1
V6950 8088G>T synonymous_variant ORF1ab_pp1a A2696A 7.32e-1 BA.1.1
V6952 8103G>T synonymous_variant ORF1ab_pp1a A2701A 8.69e-1 BA.1.1
V7125 9537G>T synonymous_variant ORF1ab_pp1a A3179A 6.32e-1 BA.1.1
V7140 9606G>T synonymous_variant ORF1ab_pp1a T3202T 8.62e-1 BA.1.1
V72 -58G>T upstream_gene_variant ORF1ab_pp1a None 7.23e-1 BA.1.1
V747 2359G>T missense_variant ORF1ab_pp1a G787W 9.59e-1 BA.1.1
V752 2374G>T stop_gained ORF1ab_pp1a E792* 9.59e-1 BA.1.1
V7559 12936G>T synonymous_variant ORF1ab_pp1a P4312P 6.09e-1 BA.1.1
V7567 12975G>T synonymous_variant ORF1ab_pp1a S4325S 7.10e-1 BA.1.1
V7604 13239G>T synonymous_variant ORF1ab_pp1ab P4413P 7.27e-1 BA.1.1
V762 2452G>T missense_variant ORF1ab_pp1a G818C 9.59e-1 BA.1.1
V7677 13854G>T synonymous_variant ORF1ab_pp1ab T4618T 6.60e-1 BA.1.1
V7699 14004G>T synonymous_variant ORF1ab_pp1ab T4668T 7.23e-1 BA.1.1
V7751 14358G>T synonymous_variant ORF1ab_pp1ab T4786T 8.54e-1 BA.1.1
V782 2593G>T missense_variant ORF1ab_pp1a G865C 6.75e-1 BA.1.1
V787 2614G>T missense_variant ORF1ab_pp1a A872S 8.69e-1 BA.1.1
V7951 15957G>T synonymous_variant ORF1ab_pp1ab P5319P 8.01e-1 BA.1.1
V8101 17070G>T synonymous_variant ORF1ab_pp1ab T5690T 6.57e-1 BA.1.1
V8328 18696G>T synonymous_variant ORF1ab_pp1ab A6232A 7.27e-1 BA.1.1
V8388 19191G>T synonymous_variant ORF1ab_pp1ab T6397T 7.89e-1 BA.1.1
V8502 20205G>T synonymous_variant ORF1ab_pp1ab A6735A 8.62e-1 BA.1.1
V8519 20406G>T synonymous_variant ORF1ab_pp1ab A6802A 8.40e-1 BA.1.1
V8549 20673G>T synonymous_variant ORF1ab_pp1ab T6891T 7.61e-1 BA.1.1
V8678 336G>T synonymous_variant S S112S 7.27e-1 BA.1.1
V8711 624G>T synonymous_variant S T208T 6.01e-1 BA.1.1
V882 2977G>T missense_variant ORF1ab_pp1a G993C 7.37e-1 BA.1.1
V9003 2883G>T synonymous_variant S T961T 8.54e-1 BA.1.1
V9253 801G>T synonymous_variant ORF3a P267P 8.85e-1 BA.1.1
V9254 804G>T synonymous_variant ORF3a T268T 8.69e-1 BA.1.1
V9262 18G>T synonymous_variant E S6S 7.11e-1 BA.1.1
V9274 108G>T synonymous_variant E A36A 8.73e-1 BA.1.1
V9332 318G>T synonymous_variant M T106T 6.96e-1 BA.1.1
V9480 315G>T synonymous_variant ORF7a A105A 6.82e-1 BA.1.1
V9550 309G>T synonymous_variant ORF8 S103S 6.82e-1 BA.1.1
V9568 48G>T synonymous_variant N T16T 6.23e-1 BA.1.1
V9753 939G>T synonymous_variant N A313A 6.90e-1 BA.1.1
V978 3319G>T stop_gained ORF1ab_pp1a G1107* 9.59e-1 BA.1.1
V9824 30G>T synonymous_variant ORF10 P10P 6.12e-1 BA.1.1
V9825 36G>T synonymous_variant ORF10 T12T 6.67e-1 BA.1.1
V1002 3424G>T stop_gained ORF1ab_pp1a E1142* 9.09e-1 BA.1
V103 -20G>T upstream_gene_variant ORF1ab_pp1a None 7.83e-1 BA.1
V1047 3610G>T missense_variant ORF1ab_pp1a A1204S 6.15e-1 BA.1
V11 -194G>T upstream_gene_variant ORF1ab_pp1a None 6.74e-1 BA.1
V111 -10G>T upstream_gene_variant ORF1ab_pp1a None 7.01e-1 BA.1
V1133 4127G>T missense_variant ORF1ab_pp1a R1376L 7.54e-1 BA.1
V1139 4157G>T missense_variant ORF1ab_pp1a R1386L 9.09e-1 BA.1
V1146 4211G>T missense_variant ORF1ab_pp1a R1404L 9.09e-1 BA.1
V1159 4318G>T missense_variant ORF1ab_pp1a D1440Y 9.53e-1 BA.1
V1164 4391G>T missense_variant ORF1ab_pp1a R1464L 9.53e-1 BA.1
V118 28G>T stop_gained ORF1ab_pp1a E10* 9.09e-1 BA.1
V120 40G>T missense_variant ORF1ab_pp1a V14F 9.09e-1 BA.1
V124 71G>T missense_variant ORF1ab_pp1a R24L 8.70e-1 BA.1
V125 73G>T missense_variant ORF1ab_pp1a D25Y 8.70e-1 BA.1
V126 76G>T missense_variant ORF1ab_pp1a V26L 9.09e-1 BA.1
V1298 5248G>T missense_variant ORF1ab_pp1a V1750L 7.31e-1 BA.1
V130 82G>T missense_variant ORF1ab_pp1a V28L 6.92e-1 BA.1
V132 86G>T missense_variant ORF1ab_pp1a R29L 8.36e-1 BA.1
V1345 5548G>T missense_variant ORF1ab_pp1a G1850C 8.36e-1 BA.1
V1374 5767G>T missense_variant ORF1ab_pp1a A1923S 9.53e-1 BA.1
V139 103G>T missense_variant ORF1ab_pp1a V35L 6.74e-1 BA.1
V1409 6032G>T missense_variant ORF1ab_pp1a R2011L 9.09e-1 BA.1
V1432 6097G>T missense_variant ORF1ab_pp1a A2033S 7.54e-1 BA.1
V1439 6124G>T stop_gained ORF1ab_pp1a E2042* 9.09e-1 BA.1
V146 128G>T missense_variant ORF1ab_pp1a R43L 9.09e-1 BA.1
V1464 6208G>T stop_gained ORF1ab_pp1a E2070* 9.53e-1 BA.1
V1544 6476G>T missense_variant ORF1ab_pp1a R2159L 9.53e-1 BA.1
V1546 6488G>T missense_variant ORF1ab_pp1a R2163L 6.58e-1 BA.1
V1565 6619G>T missense_variant ORF1ab_pp1a G2207C 6.29e-1 BA.1
V1578 6742G>T missense_variant ORF1ab_pp1a A2248S 9.53e-1 BA.1
V162 178G>T missense_variant ORF1ab_pp1a V60F 7.11e-1 BA.1
V1644 7207G>T missense_variant ORF1ab_pp1a G2403C 9.53e-1 BA.1
V1649 7244G>T missense_variant ORF1ab_pp1a R2415L 9.53e-1 BA.1
V1651 7264G>T stop_gained ORF1ab_pp1a E2422* 9.53e-1 BA.1
V1662 7471G>T missense_variant ORF1ab_pp1a V2491F 9.53e-1 BA.1
V168 218G>T missense_variant ORF1ab_pp1a R73L 8.70e-1 BA.1
V1712 7783G>T missense_variant ORF1ab_pp1a V2595F 9.53e-1 BA.1
V1716 7810G>T missense_variant ORF1ab_pp1a V2604L 8.70e-1 BA.1
V1743 7913G>T missense_variant ORF1ab_pp1a R2638L 9.53e-1 BA.1
V175 230G>T missense_variant ORF1ab_pp1a R77L 6.15e-1 BA.1
V1753 8002G>T missense_variant ORF1ab_pp1a D2668Y 9.53e-1 BA.1
V1760 8057G>T missense_variant ORF1ab_pp1a R2686L 9.53e-1 BA.1
V1766 8090G>T missense_variant ORF1ab_pp1a R2697L 9.53e-1 BA.1
V1774 8143G>T missense_variant ORF1ab_pp1a V2715F 9.05e-1 BA.1
V1777 8177G>T missense_variant ORF1ab_pp1a R2726L 9.53e-1 BA.1
V1778 8189G>T missense_variant ORF1ab_pp1a R2730L 9.09e-1 BA.1
V1819 8453G>T missense_variant ORF1ab_pp1a R2818L 9.53e-1 BA.1
V1829 8522G>T missense_variant ORF1ab_pp1a R2841L 9.53e-1 BA.1
V1846 8596G>T missense_variant ORF1ab_pp1a V2866L 9.09e-1 BA.1
V1857 8624G>T missense_variant ORF1ab_pp1a R2875L 9.53e-1 BA.1
V1883 8846G>T missense_variant ORF1ab_pp1a R2949L 9.53e-1 BA.1
V1886 8858G>T missense_variant ORF1ab_pp1a R2953L 9.09e-1 BA.1
V1900 8959G>T missense_variant ORF1ab_pp1a G2987C 8.70e-1 BA.1
V1964 9581G>T missense_variant ORF1ab_pp1a R3194L 9.53e-1 BA.1
V1979 9703G>T missense_variant ORF1ab_pp1a A3235S 6.03e-1 BA.1
V1993 9874G>T missense_variant ORF1ab_pp1a G3292C 9.53e-1 BA.1
V1997 9892G>T missense_variant ORF1ab_pp1a V3298L 8.06e-1 BA.1
V2005 9968G>T missense_variant ORF1ab_pp1a R3323L 8.36e-1 BA.1
V2030 10103G>T missense_variant ORF1ab_pp1a R3368L 9.53e-1 BA.1
V2055 10417G>T missense_variant ORF1ab_pp1a A3473S 9.53e-1 BA.1
V2060 10454G>T missense_variant ORF1ab_pp1a R3485L 9.53e-1 BA.1
V207 277G>T stop_gained ORF1ab_pp1a E93* 9.53e-1 BA.1
V2079 10570G>T missense_variant ORF1ab_pp1a V3524F 8.70e-1 BA.1
V2087 10625G>T missense_variant ORF1ab_pp1a R3542L 8.70e-1 BA.1
V21 -165G>T upstream_gene_variant ORF1ab_pp1a None 7.04e-1 BA.1
V212 292G>T missense_variant ORF1ab_pp1a G98C 7.11e-1 BA.1
V215 296G>T missense_variant ORF1ab_pp1a R99L 8.36e-1 BA.1
V2151 10985G>T missense_variant ORF1ab_pp1a R3662L 8.58e-1 BA.1
V2238 11405G>T missense_variant ORF1ab_pp1a R3802L 9.09e-1 BA.1
V228 337G>T stop_gained ORF1ab_pp1a E113* 9.53e-1 BA.1
V2310 11978G>T missense_variant ORF1ab_pp1a R3993L 7.54e-1 BA.1
V2313 11996G>T missense_variant ORF1ab_pp1a R3999L 8.70e-1 BA.1
V2358 12449G>T missense_variant ORF1ab_pp1a R4150L 9.53e-1 BA.1
V2362 12469G>T missense_variant ORF1ab_pp1a G4157C 9.53e-1 BA.1
V2386 12559G>T missense_variant ORF1ab_pp1a D4187Y 9.53e-1 BA.1
V239 356G>T missense_variant ORF1ab_pp1a R119L 9.09e-1 BA.1
V2406 12752G>T missense_variant ORF1ab_pp1a R4251L 9.09e-1 BA.1
V2424 12992G>T missense_variant ORF1ab_pp1a R4331L 8.70e-1 BA.1
V243 371G>T missense_variant ORF1ab_pp1a R124L 8.06e-1 BA.1
V2438 13114G>T missense_variant ORF1ab_pp1a V4372F 9.53e-1 BA.1
V2439 13120G>T missense_variant ORF1ab_pp1a G4374C 8.36e-1 BA.1
V2445 13160G>T missense_variant ORF1ab_pp1a R4387L 9.09e-1 BA.1
V2446 13162G>T stop_gained ORF1ab_pp1a E4388* 9.53e-1 BA.1
V245 379G>T missense_variant ORF1ab_pp1a G127C 8.70e-1 BA.1
V2452 13204G>T missense_variant ORF1ab_pp1a G4402W 9.53e-1 BA.1
V2453 13213G>T missense_variant ORF1ab_pp1ab G4405C 9.53e-1 BA.1
V2456 13229G>T missense_variant ORF1ab_pp1ab R4410L 9.53e-1 BA.1
V2459 13243G>T missense_variant ORF1ab_pp1ab G4415C 9.53e-1 BA.1
V2463 13267G>T missense_variant ORF1ab_pp1ab V4423L 9.53e-1 BA.1
V2470 13340G>T missense_variant ORF1ab_pp1ab R4447L 9.53e-1 BA.1
V2474 13357G>T stop_gained ORF1ab_pp1ab E4453* 9.53e-1 BA.1
V2496 13498G>T missense_variant ORF1ab_pp1ab G4500C 9.09e-1 BA.1
V2500 13523G>T missense_variant ORF1ab_pp1ab R4508L 9.53e-1 BA.1
V2503 13529G>T missense_variant ORF1ab_pp1ab R4510L 9.53e-1 BA.1
V2507 13558G>T missense_variant ORF1ab_pp1ab V4520F 9.53e-1 BA.1
V251 409G>T missense_variant ORF1ab_pp1a G137C 8.36e-1 BA.1
V2528 13694G>T missense_variant ORF1ab_pp1ab R4565L 8.36e-1 BA.1
V2529 13696G>T missense_variant ORF1ab_pp1ab V4566L 9.53e-1 BA.1
V2532 13702G>T missense_variant ORF1ab_pp1ab A4568S 8.70e-1 BA.1
V2534 13718G>T missense_variant ORF1ab_pp1ab R4573L 8.70e-1 BA.1
V2535 13724G>T missense_variant ORF1ab_pp1ab R4575L 9.53e-1 BA.1
V2540 13766G>T missense_variant ORF1ab_pp1ab R4589L 9.09e-1 BA.1
V2543 13834G>T missense_variant ORF1ab_pp1ab G4612C 9.09e-1 BA.1
V255 412G>T missense_variant ORF1ab_pp1a A138S 9.09e-1 BA.1
V257 415G>T missense_variant ORF1ab_pp1a D139Y 6.92e-1 BA.1
V2584 14030G>T missense_variant ORF1ab_pp1ab R4677L 9.09e-1 BA.1
V2612 14320G>T missense_variant ORF1ab_pp1ab A4774S 9.53e-1 BA.1
V2615 14351G>T missense_variant ORF1ab_pp1ab R4784L 9.53e-1 BA.1
V2620 14413G>T missense_variant ORF1ab_pp1ab G4805C 9.53e-1 BA.1
V2631 14530G>T missense_variant ORF1ab_pp1ab D4844Y 9.53e-1 BA.1
V2632 14546G>T missense_variant ORF1ab_pp1ab R4849L 9.53e-1 BA.1
V2641 14659G>T missense_variant ORF1ab_pp1ab V4887F 9.53e-1 BA.1
V2652 14761G>T missense_variant ORF1ab_pp1ab A4921S 8.70e-1 BA.1
V2654 14774G>T missense_variant ORF1ab_pp1ab R4925L 9.09e-1 BA.1
V2656 14840G>T missense_variant ORF1ab_pp1ab R4947L 9.53e-1 BA.1
V2657 14845G>T missense_variant ORF1ab_pp1ab V4949L 9.53e-1 BA.1
V2660 14917G>T missense_variant ORF1ab_pp1ab A4973S 8.06e-1 BA.1
V2680 15095G>T missense_variant ORF1ab_pp1ab R5032L 9.53e-1 BA.1
V2687 15128G>T missense_variant ORF1ab_pp1ab R5043L 8.70e-1 BA.1
V269 439G>T missense_variant ORF1ab_pp1a D147Y 9.09e-1 BA.1
V2695 15187G>T missense_variant ORF1ab_pp1ab G5063C 6.43e-1 BA.1
V270 442G>T stop_gained ORF1ab_pp1a E148* 9.53e-1 BA.1
V2702 15325G>T missense_variant ORF1ab_pp1ab D5109Y 9.53e-1 BA.1
V2706 15338G>T missense_variant ORF1ab_pp1ab R5113L 6.74e-1 BA.1
V2715 15415G>T missense_variant ORF1ab_pp1ab A5139S 9.53e-1 BA.1
V2716 15425G>T missense_variant ORF1ab_pp1ab R5142L 8.70e-1 BA.1
V2719 15457G>T missense_variant ORF1ab_pp1ab D5153Y 9.53e-1 BA.1
V2743 15697G>T missense_variant ORF1ab_pp1ab G5233C 9.53e-1 BA.1
V2746 15749G>T missense_variant ORF1ab_pp1ab R5250L 9.53e-1 BA.1
V2747 15754G>T missense_variant ORF1ab_pp1ab V5252L 9.53e-1 BA.1
V2772 16034G>T missense_variant ORF1ab_pp1ab R5345L 9.09e-1 BA.1
V2796 16273G>T missense_variant ORF1ab_pp1ab D5425Y 9.53e-1 BA.1
V2812 16436G>T missense_variant ORF1ab_pp1ab R5479L 8.36e-1 BA.1
V2822 16505G>T missense_variant ORF1ab_pp1ab R5502L 9.53e-1 BA.1
V2823 16529G>T missense_variant ORF1ab_pp1ab R5510L 8.06e-1 BA.1
V2834 16607G>T missense_variant ORF1ab_pp1ab R5536L 9.05e-1 BA.1
V285 512G>T missense_variant ORF1ab_pp1a R171L 8.70e-1 BA.1
V287 524G>T missense_variant ORF1ab_pp1a R175L 8.70e-1 BA.1
V2880 16880G>T missense_variant ORF1ab_pp1ab R5627L 8.36e-1 BA.1
V2884 16909G>T missense_variant ORF1ab_pp1ab A5637S 9.05e-1 BA.1
V289 535G>T stop_gained ORF1ab_pp1a G179* 9.53e-1 BA.1
V2894 16982G>T missense_variant ORF1ab_pp1ab R5661L 8.36e-1 BA.1
V2896 16988G>T missense_variant ORF1ab_pp1ab R5663L 9.09e-1 BA.1
V29 -142G>T upstream_gene_variant ORF1ab_pp1a None 7.46e-1 BA.1
V2919 17173G>T missense_variant ORF1ab_pp1ab D5725Y 9.53e-1 BA.1
V2923 17198G>T missense_variant ORF1ab_pp1ab R5733L 9.53e-1 BA.1
V2933 17287G>T stop_gained ORF1ab_pp1ab G5763* 9.53e-1 BA.1
V2935 17297G>T missense_variant ORF1ab_pp1ab R5766L 9.09e-1 BA.1
V2936 17300G>T missense_variant ORF1ab_pp1ab R5767L 9.53e-1 BA.1
V2956 17455G>T missense_variant ORF1ab_pp1ab V5819L 9.53e-1 BA.1
V296 551G>T missense_variant ORF1ab_pp1a R184L 7.11e-1 BA.1
V2960 17477G>T missense_variant ORF1ab_pp1ab R5826L 9.09e-1 BA.1
V297 559G>T missense_variant ORF1ab_pp1a D187Y 9.53e-1 BA.1
V2992 17753G>T missense_variant ORF1ab_pp1ab R5918L 9.09e-1 BA.1
V3039 18002G>T missense_variant ORF1ab_pp1ab R6001L 7.01e-1 BA.1
V3040 18004G>T stop_gained ORF1ab_pp1ab E6002* 9.05e-1 BA.1
V3045 18026G>T missense_variant ORF1ab_pp1ab R6009L 9.05e-1 BA.1
V3048 18043G>T missense_variant ORF1ab_pp1ab D6015Y 9.05e-1 BA.1
V3049 18049G>T stop_gained ORF1ab_pp1ab E6017* 9.05e-1 BA.1
V3085 18263G>T missense_variant ORF1ab_pp1ab R6088L 9.53e-1 BA.1
V3092 18319G>T missense_variant ORF1ab_pp1ab V6107L 6.43e-1 BA.1
V3102 18389G>T missense_variant ORF1ab_pp1ab R6130L 9.53e-1 BA.1
V3105 18413G>T missense_variant ORF1ab_pp1ab R6138L 9.09e-1 BA.1
V311 620G>T missense_variant ORF1ab_pp1a R207L 8.70e-1 BA.1
V3115 18481G>T missense_variant ORF1ab_pp1ab V6161F 7.31e-1 BA.1
V3130 18625G>T stop_gained ORF1ab_pp1ab E6209* 9.53e-1 BA.1
V3135 18641G>T missense_variant ORF1ab_pp1ab R6214L 9.09e-1 BA.1
V3187 18943G>T missense_variant ORF1ab_pp1ab D6315Y 9.53e-1 BA.1
V321 649G>T stop_gained ORF1ab_pp1a E217* 9.53e-1 BA.1
V3216 19202G>T missense_variant ORF1ab_pp1ab R6401L 9.53e-1 BA.1
V3220 19261G>T missense_variant ORF1ab_pp1ab D6421Y 6.58e-1 BA.1
V3254 19538G>T missense_variant ORF1ab_pp1ab R6513L 9.53e-1 BA.1
V3293 19769G>T missense_variant ORF1ab_pp1ab R6590L 9.09e-1 BA.1
V332 695G>T missense_variant ORF1ab_pp1a R232L 8.06e-1 BA.1
V3331 20027G>T missense_variant ORF1ab_pp1ab R6676L 9.53e-1 BA.1
V3334 20053G>T stop_gained ORF1ab_pp1ab E6685* 9.09e-1 BA.1
V3338 20062G>T missense_variant ORF1ab_pp1ab V6688F 9.09e-1 BA.1
V3345 20126G>T missense_variant ORF1ab_pp1ab R6709L 9.09e-1 BA.1
V336 731G>T missense_variant ORF1ab_pp1a R244L 8.70e-1 BA.1
V3415 20527G>T missense_variant ORF1ab_pp1ab A6843S 8.36e-1 BA.1
V3428 20683G>T missense_variant ORF1ab_pp1ab D6895Y 9.53e-1 BA.1
V3444 20791G>T missense_variant ORF1ab_pp1ab D6931Y 9.53e-1 BA.1
V3462 20893G>T missense_variant ORF1ab_pp1ab V6965L 9.53e-1 BA.1
V3487 21041G>T missense_variant ORF1ab_pp1ab R7014L 9.53e-1 BA.1
V3488 21043G>T stop_gained ORF1ab_pp1ab E7015* 9.53e-1 BA.1
V3517 -5G>T upstream_gene_variant S None 9.53e-1 BA.1
V3562 101G>T missense_variant S R34L 7.78e-1 BA.1
V3621 367G>T missense_variant S A123S 9.09e-1 BA.1
V370 902G>T missense_variant ORF1ab_pp1a R301L 9.09e-1 BA.1
V3737 641G>T missense_variant S R214L 7.78e-1 BA.1
V38 -114G>T upstream_gene_variant ORF1ab_pp1a None 7.63e-1 BA.1
V3822 1030G>T missense_variant S A344S 7.63e-1 BA.1
V3923 1478A>T missense_variant S Q493L 6.03e-1 BA.1
V3959 1730G>T missense_variant S R577L 8.53e-1 BA.1
V396 1003G>T missense_variant ORF1ab_pp1a D335Y 8.70e-1 BA.1
V3985 1901G>T missense_variant S R634L 9.53e-1 BA.1
V3991 1937G>T missense_variant S R646L 9.09e-1 BA.1
V4005 2014G>T missense_variant S A672S 9.53e-1 BA.1
V401 1024G>T stop_gained ORF1ab_pp1a E342* 9.53e-1 BA.1
V4025 2045G>T missense_variant S R682L 8.70e-1 BA.1
V4026 2048G>T missense_variant S R683L 6.29e-1 BA.1
V4029 2054G>T missense_variant S R685L 9.53e-1 BA.1
V41 -101G>T upstream_gene_variant ORF1ab_pp1a None 8.04e-1 BA.1
V4150 2948G>T missense_variant S R983L 9.05e-1 BA.1
V4185 3272G>T missense_variant S R1091L 7.31e-1 BA.1
V4235 3554G>T missense_variant S R1185L 8.58e-1 BA.1
V4244 3595G>T missense_variant S D1199Y 8.70e-1 BA.1
V4302 -6G>T upstream_gene_variant ORF3a None 8.70e-1 BA.1
V4345 89G>T missense_variant ORF3a R30L 6.43e-1 BA.1
V437 1156G>T stop_gained ORF1ab_pp1a E386* 9.53e-1 BA.1
V4379 130G>T stop_gained ORF3a G44* 9.09e-1 BA.1
V4391 148G>T missense_variant ORF3a V50F 6.43e-1 BA.1
V4410 175G>T missense_variant ORF3a A59S 6.74e-1 BA.1
V446 1193G>T missense_variant ORF1ab_pp1a R398L 9.53e-1 BA.1
V453 1205G>T missense_variant ORF1ab_pp1a R402L 9.53e-1 BA.1
V4614 751G>T missense_variant ORF3a G251C 7.54e-1 BA.1
V4672 70G>T missense_variant E V24L 8.06e-1 BA.1
V469 1285G>T missense_variant ORF1ab_pp1a A429S 9.53e-1 BA.1
V4722 16G>T missense_variant M G6C 6.96e-1 BA.1
V4763 247G>T missense_variant M A83S 6.78e-1 BA.1
V4772 320G>T missense_variant M R107L 7.53e-1 BA.1
V4784 521G>T missense_variant M R174L 6.15e-1 BA.1
V4788 593G>T missense_variant M R198L 6.74e-1 BA.1
V4812 59G>T missense_variant ORF6 R20M 6.78e-1 BA.1
V484 1330G>T stop_gained ORF1ab_pp1a E444* 9.53e-1 BA.1
V4864 37G>T missense_variant ORF7a A13S 9.53e-1 BA.1
V4895 121G>T stop_gained ORF7a E41* 7.31e-1 BA.1
V4930 208G>T missense_variant ORF7a G70C 7.11e-1 BA.1
V4932 211G>T missense_variant ORF7a V71L 6.15e-1 BA.1
V4943 233G>T missense_variant ORF7a R78L 8.06e-1 BA.1
V5056 127G>T missense_variant ORF7b A43S 6.67e-1 BA.1
V5061 -4G>T upstream_gene_variant ORF8 None 6.67e-1 BA.1
V511 1420G>T missense_variant ORF1ab_pp1a A474S 9.09e-1 BA.1
V5173 223G>T missense_variant ORF8 D75Y 9.09e-1 BA.1
V5176 229G>T missense_variant ORF8 G77C 8.70e-1 BA.1
V5196 302G>T missense_variant ORF8 R101L 8.70e-1 BA.1
V5209 340G>T missense_variant ORF8 V114F 8.70e-1 BA.1
V5212 344G>T missense_variant ORF8 R115L 6.29e-1 BA.1
V5234 -12G>T upstream_gene_variant N None 9.53e-1 BA.1
V5266 29G>T missense_variant N R10L 9.53e-1 BA.1
V5277 41G>T missense_variant N R14L 8.06e-1 BA.1
V5324 107G>T missense_variant N R36L 7.54e-1 BA.1
V5333 122G>T missense_variant N R41L 6.03e-1 BA.1
V5345 203G>T missense_variant N R68L 7.54e-1 BA.1
V5349 214G>T missense_variant N V72F 9.09e-1 BA.1
V5355 263G>T missense_variant N R88L 9.53e-1 BA.1
V5359 278G>T missense_variant N R93L 7.54e-1 BA.1
V5361 284G>T missense_variant N R95L 7.78e-1 BA.1
V5364 295G>T missense_variant N G99C 9.09e-1 BA.1
V5379 385G>T missense_variant N G129C 9.09e-1 BA.1
V5395 446G>T missense_variant N R149L 9.53e-1 BA.1
V5404 472G>T missense_variant N V158L 7.78e-1 BA.1
V5414 517G>T missense_variant N A173S 8.70e-1 BA.1
V5419 535G>T missense_variant N G179C 6.92e-1 BA.1
V5429 554G>T missense_variant N R185L 9.09e-1 BA.1
V5434 566G>T missense_variant N R189L 8.06e-1 BA.1
V5437 572G>T missense_variant N R191L 7.54e-1 BA.1
V5536 776G>T missense_variant N R259L 9.09e-1 BA.1
V5537 785G>T missense_variant N R262L 9.09e-1 BA.1
V554 1625G>T missense_variant ORF1ab_pp1a R542L 7.54e-1 BA.1
V5546 823G>T missense_variant N G275C 9.09e-1 BA.1
V5547 830G>T missense_variant N R277L 9.53e-1 BA.1
V556 1634G>T missense_variant ORF1ab_pp1a R545L 8.70e-1 BA.1
V5565 931G>T missense_variant N A311S 8.36e-1 BA.1
V5566 946G>T stop_gained N G316* 9.53e-1 BA.1
V5570 956G>T missense_variant N R319L 9.53e-1 BA.1
V563 1649G>T missense_variant ORF1ab_pp1a R550L 9.53e-1 BA.1
V5708 71G>T missense_variant ORF10 R24L 6.58e-1 BA.1
V574 1679G>T missense_variant ORF1ab_pp1a R560L 9.09e-1 BA.1
V581 1696G>T missense_variant ORF1ab_pp1a A566S 8.70e-1 BA.1
V5970 726G>T synonymous_variant ORF1ab_pp1a T242T 7.78e-1 BA.1
V6010 999G>T synonymous_variant ORF1ab_pp1a T333T 6.58e-1 BA.1
V61 -68G>T upstream_gene_variant ORF1ab_pp1a None 6.23e-1 BA.1
V6121 1830G>T synonymous_variant ORF1ab_pp1a S610S 9.53e-1 BA.1
V6165 2133G>T synonymous_variant ORF1ab_pp1a T711T 7.78e-1 BA.1
V643 1933G>T missense_variant ORF1ab_pp1a G645C 8.06e-1 BA.1
V657 1981G>T missense_variant ORF1ab_pp1a G661C 6.03e-1 BA.1
V6610 5364G>T synonymous_variant ORF1ab_pp1a T1788T 6.43e-1 BA.1
V6634 5592G>T synonymous_variant ORF1ab_pp1a T1864T 8.36e-1 BA.1
V6686 6006G>T synonymous_variant ORF1ab_pp1a T2002T 8.36e-1 BA.1
V6704 6099G>T synonymous_variant ORF1ab_pp1a A2033A 8.36e-1 BA.1
V6765 6585G>T synonymous_variant ORF1ab_pp1a P2195P 6.29e-1 BA.1
V6908 7791G>T synonymous_variant ORF1ab_pp1a T2597T 7.54e-1 BA.1
V6950 8088G>T synonymous_variant ORF1ab_pp1a A2696A 8.06e-1 BA.1
V6952 8103G>T synonymous_variant ORF1ab_pp1a A2701A 7.83e-1 BA.1
V7125 9537G>T synonymous_variant ORF1ab_pp1a A3179A 6.74e-1 BA.1
V7140 9606G>T synonymous_variant ORF1ab_pp1a T3202T 9.53e-1 BA.1
V72 -58G>T upstream_gene_variant ORF1ab_pp1a None 7.01e-1 BA.1
V747 2359G>T missense_variant ORF1ab_pp1a G787W 9.53e-1 BA.1
V752 2374G>T stop_gained ORF1ab_pp1a E792* 9.53e-1 BA.1
V7567 12975G>T synonymous_variant ORF1ab_pp1a S4325S 7.11e-1 BA.1
V7604 13239G>T synonymous_variant ORF1ab_pp1ab P4413P 6.74e-1 BA.1
V762 2452G>T missense_variant ORF1ab_pp1a G818C 9.53e-1 BA.1
V7677 13854G>T synonymous_variant ORF1ab_pp1ab T4618T 7.31e-1 BA.1
V7699 14004G>T synonymous_variant ORF1ab_pp1ab T4668T 7.78e-1 BA.1
V782 2593G>T missense_variant ORF1ab_pp1a G865C 6.58e-1 BA.1
V7951 15957G>T synonymous_variant ORF1ab_pp1ab P5319P 8.06e-1 BA.1
V8252 18198G>T synonymous_variant ORF1ab_pp1ab P6066P 7.11e-1 BA.1
V8328 18696G>T synonymous_variant ORF1ab_pp1ab A6232A 6.29e-1 BA.1
V8388 19191G>T synonymous_variant ORF1ab_pp1ab T6397T 7.78e-1 BA.1
V8502 20205G>T synonymous_variant ORF1ab_pp1ab A6735A 9.53e-1 BA.1
V8519 20406G>T synonymous_variant ORF1ab_pp1ab A6802A 9.09e-1 BA.1
V8678 336G>T synonymous_variant S S112S 6.74e-1 BA.1
V8698 489G>T synonymous_variant S A163A 6.03e-1 BA.1
V882 2977G>T missense_variant ORF1ab_pp1a G993C 7.54e-1 BA.1
V8973 2637G>T synonymous_variant S A879A 6.58e-1 BA.1
V9003 2883G>T synonymous_variant S T961T 8.36e-1 BA.1
V9253 801G>T synonymous_variant ORF3a P267P 9.53e-1 BA.1
V9254 804G>T synonymous_variant ORF3a T268T 8.70e-1 BA.1
V9262 18G>T synonymous_variant E S6S 7.31e-1 BA.1
V9274 108G>T synonymous_variant E A36A 7.27e-1 BA.1
V9480 315G>T synonymous_variant ORF7a A105A 6.92e-1 BA.1
V9550 309G>T synonymous_variant ORF8 S103S 6.92e-1 BA.1
V9568 48G>T synonymous_variant N T16T 6.15e-1 BA.1
V9753 939G>T synonymous_variant N A313A 6.15e-1 BA.1
V978 3319G>T stop_gained ORF1ab_pp1a G1107* 9.53e-1 BA.1
V988 3355G>T missense_variant ORF1ab_pp1a G1119C 6.15e-1 BA.1
V1002 3424G>T stop_gained ORF1ab_pp1a E1142* 9.49e-1 BA.2
V1026 3509G>T missense_variant ORF1ab_pp1a R1170L 6.85e-1 BA.2
V103 -20G>T upstream_gene_variant ORF1ab_pp1a None 8.05e-1 BA.2
V1047 3610G>T missense_variant ORF1ab_pp1a A1204S 8.19e-1 BA.2
V11 -194G>T upstream_gene_variant ORF1ab_pp1a None 8.22e-1 BA.2
V111 -10G>T upstream_gene_variant ORF1ab_pp1a None 6.90e-1 BA.2
V1133 4127G>T missense_variant ORF1ab_pp1a R1376L 9.25e-1 BA.2
V1139 4157G>T missense_variant ORF1ab_pp1a R1386L 9.49e-1 BA.2
V1146 4211G>T missense_variant ORF1ab_pp1a R1404L 9.23e-1 BA.2
V1164 4391G>T missense_variant ORF1ab_pp1a R1464L 9.03e-1 BA.2
V118 28G>T stop_gained ORF1ab_pp1a E10* 9.49e-1 BA.2
V120 40G>T missense_variant ORF1ab_pp1a V14F 9.11e-1 BA.2
V124 71G>T missense_variant ORF1ab_pp1a R24L 8.78e-1 BA.2
V125 73G>T missense_variant ORF1ab_pp1a D25Y 9.23e-1 BA.2
V126 76G>T missense_variant ORF1ab_pp1a V26L 8.58e-1 BA.2
V1298 5248G>T missense_variant ORF1ab_pp1a V1750L 6.35e-1 BA.2
V130 82G>T missense_variant ORF1ab_pp1a V28L 8.13e-1 BA.2
V132 86G>T missense_variant ORF1ab_pp1a R29L 9.49e-1 BA.2
V1345 5548G>T missense_variant ORF1ab_pp1a G1850C 8.72e-1 BA.2
V1374 5767G>T missense_variant ORF1ab_pp1a A1923S 8.44e-1 BA.2
V139 103G>T missense_variant ORF1ab_pp1a V35L 7.97e-1 BA.2
V1409 6032G>T missense_variant ORF1ab_pp1a R2011L 9.62e-1 BA.2
V1432 6097G>T missense_variant ORF1ab_pp1a A2033S 6.67e-1 BA.2
V1439 6124G>T stop_gained ORF1ab_pp1a E2042* 9.62e-1 BA.2
V146 128G>T missense_variant ORF1ab_pp1a R43L 8.22e-1 BA.2
V1464 6208G>T stop_gained ORF1ab_pp1a E2070* 9.62e-1 BA.2
V1544 6476G>T missense_variant ORF1ab_pp1a R2159L 9.62e-1 BA.2
V1546 6488G>T missense_variant ORF1ab_pp1a R2163L 9.62e-1 BA.2
V1565 6619G>T missense_variant ORF1ab_pp1a G2207C 7.68e-1 BA.2
V1578 6742G>T missense_variant ORF1ab_pp1a A2248S 6.20e-1 BA.2
V162 178G>T missense_variant ORF1ab_pp1a V60F 6.71e-1 BA.2
V1644 7207G>T missense_variant ORF1ab_pp1a G2403C 9.62e-1 BA.2
V1649 7244G>T missense_variant ORF1ab_pp1a R2415L 9.62e-1 BA.2
V1651 7264G>T stop_gained ORF1ab_pp1a E2422* 9.37e-1 BA.2
V1662 7471G>T missense_variant ORF1ab_pp1a V2491F 9.49e-1 BA.2
V168 218G>T missense_variant ORF1ab_pp1a R73L 9.36e-1 BA.2
V1712 7783G>T missense_variant ORF1ab_pp1a V2595F 8.04e-1 BA.2
V1716 7810G>T missense_variant ORF1ab_pp1a V2604L 8.92e-1 BA.2
V1743 7913G>T missense_variant ORF1ab_pp1a R2638L 9.62e-1 BA.2
V175 230G>T missense_variant ORF1ab_pp1a R77L 9.36e-1 BA.2
V1753 8002G>T missense_variant ORF1ab_pp1a D2668Y 9.62e-1 BA.2
V1760 8057G>T missense_variant ORF1ab_pp1a R2686L 9.49e-1 BA.2
V1766 8090G>T missense_variant ORF1ab_pp1a R2697L 9.62e-1 BA.2
V1774 8143G>T missense_variant ORF1ab_pp1a V2715F 7.68e-1 BA.2
V1777 8177G>T missense_variant ORF1ab_pp1a R2726L 9.62e-1 BA.2
V1778 8189G>T missense_variant ORF1ab_pp1a R2730L 9.62e-1 BA.2
V1819 8453G>T missense_variant ORF1ab_pp1a R2818L 9.14e-1 BA.2
V1829 8522G>T missense_variant ORF1ab_pp1a R2841L 9.62e-1 BA.2
V1846 8596G>T missense_variant ORF1ab_pp1a V2866L 9.49e-1 BA.2
V1857 8624G>T missense_variant ORF1ab_pp1a R2875L 9.37e-1 BA.2
V1883 8846G>T missense_variant ORF1ab_pp1a R2949L 9.49e-1 BA.2
V1886 8858G>T missense_variant ORF1ab_pp1a R2953L 9.14e-1 BA.2
V1900 8959G>T missense_variant ORF1ab_pp1a G2987C 9.62e-1 BA.2
V1961 9491G>T missense_variant ORF1ab_pp1a R3164L 9.37e-1 BA.2
V1964 9581G>T missense_variant ORF1ab_pp1a R3194L 9.62e-1 BA.2
V1979 9703G>T missense_variant ORF1ab_pp1a A3235S 6.29e-1 BA.2
V1993 9874G>T missense_variant ORF1ab_pp1a G3292C 9.08e-1 BA.2
V1997 9892G>T missense_variant ORF1ab_pp1a V3298L 7.24e-1 BA.2
V2005 9968G>T missense_variant ORF1ab_pp1a R3323L 8.46e-1 BA.2
V2030 10103G>T missense_variant ORF1ab_pp1a R3368L 8.55e-1 BA.2
V2055 10417G>T missense_variant ORF1ab_pp1a A3473S 9.62e-1 BA.2
V2060 10454G>T missense_variant ORF1ab_pp1a R3485L 9.37e-1 BA.2
V207 277G>T stop_gained ORF1ab_pp1a E93* 9.49e-1 BA.2
V2079 10570G>T missense_variant ORF1ab_pp1a V3524F 9.49e-1 BA.2
V2087 10625G>T missense_variant ORF1ab_pp1a R3542L 9.37e-1 BA.2
V21 -165G>T upstream_gene_variant ORF1ab_pp1a None 6.18e-1 BA.2
V215 296G>T missense_variant ORF1ab_pp1a R99L 6.25e-1 BA.2
V2151 10985G>T missense_variant ORF1ab_pp1a R3662L 7.49e-1 BA.2
V2238 11405G>T missense_variant ORF1ab_pp1a R3802L 9.49e-1 BA.2
V228 337G>T stop_gained ORF1ab_pp1a E113* 9.62e-1 BA.2
V2310 11978G>T missense_variant ORF1ab_pp1a R3993L 9.62e-1 BA.2
V2313 11996G>T missense_variant ORF1ab_pp1a R3999L 9.49e-1 BA.2
V2358 12449G>T missense_variant ORF1ab_pp1a R4150L 9.62e-1 BA.2
V2362 12469G>T missense_variant ORF1ab_pp1a G4157C 9.62e-1 BA.2
V2386 12559G>T missense_variant ORF1ab_pp1a D4187Y 9.62e-1 BA.2
V239 356G>T missense_variant ORF1ab_pp1a R119L 8.92e-1 BA.2
V2406 12752G>T missense_variant ORF1ab_pp1a R4251L 9.62e-1 BA.2
V2424 12992G>T missense_variant ORF1ab_pp1a R4331L 9.11e-1 BA.2
V243 371G>T missense_variant ORF1ab_pp1a R124L 6.67e-1 BA.2
V2438 13114G>T missense_variant ORF1ab_pp1a V4372F 8.34e-1 BA.2
V2439 13120G>T missense_variant ORF1ab_pp1a G4374C 9.35e-1 BA.2
V2445 13160G>T missense_variant ORF1ab_pp1a R4387L 8.98e-1 BA.2
V2446 13162G>T stop_gained ORF1ab_pp1a E4388* 9.35e-1 BA.2
V245 379G>T missense_variant ORF1ab_pp1a G127C 7.68e-1 BA.2
V2452 13204G>T missense_variant ORF1ab_pp1a G4402W 9.62e-1 BA.2
V2453 13213G>T missense_variant ORF1ab_pp1ab G4405C 9.62e-1 BA.2
V2456 13229G>T missense_variant ORF1ab_pp1ab R4410L 9.62e-1 BA.2
V2459 13243G>T missense_variant ORF1ab_pp1ab G4415C 9.62e-1 BA.2
V2463 13267G>T missense_variant ORF1ab_pp1ab V4423L 9.49e-1 BA.2
V2470 13340G>T missense_variant ORF1ab_pp1ab R4447L 9.62e-1 BA.2
V2474 13357G>T stop_gained ORF1ab_pp1ab E4453* 9.62e-1 BA.2
V2496 13498G>T missense_variant ORF1ab_pp1ab G4500C 8.19e-1 BA.2
V2500 13523G>T missense_variant ORF1ab_pp1ab R4508L 9.62e-1 BA.2
V2503 13529G>T missense_variant ORF1ab_pp1ab R4510L 7.26e-1 BA.2
V2507 13558G>T missense_variant ORF1ab_pp1ab V4520F 9.62e-1 BA.2
V251 409G>T missense_variant ORF1ab_pp1a G137C 7.49e-1 BA.2
V2528 13694G>T missense_variant ORF1ab_pp1ab R4565L 9.14e-1 BA.2
V2529 13696G>T missense_variant ORF1ab_pp1ab V4566L 9.14e-1 BA.2
V2532 13702G>T missense_variant ORF1ab_pp1ab A4568S 8.92e-1 BA.2
V2535 13724G>T missense_variant ORF1ab_pp1ab R4575L 9.62e-1 BA.2
V2540 13766G>T missense_variant ORF1ab_pp1ab R4589L 8.44e-1 BA.2
V2543 13834G>T missense_variant ORF1ab_pp1ab G4612C 9.62e-1 BA.2
V255 412G>T missense_variant ORF1ab_pp1a A138S 8.82e-1 BA.2
V257 415G>T missense_variant ORF1ab_pp1a D139Y 8.63e-1 BA.2
V2584 14030G>T missense_variant ORF1ab_pp1ab R4677L 8.72e-1 BA.2
V2612 14320G>T missense_variant ORF1ab_pp1ab A4774S 8.92e-1 BA.2
V2615 14351G>T missense_variant ORF1ab_pp1ab R4784L 9.62e-1 BA.2
V2620 14413G>T missense_variant ORF1ab_pp1ab G4805C 9.37e-1 BA.2
V2631 14530G>T missense_variant ORF1ab_pp1ab D4844Y 9.62e-1 BA.2
V2632 14546G>T missense_variant ORF1ab_pp1ab R4849L 9.62e-1 BA.2
V2641 14659G>T missense_variant ORF1ab_pp1ab V4887F 9.49e-1 BA.2
V2652 14761G>T missense_variant ORF1ab_pp1ab A4921S 8.27e-1 BA.2
V2654 14774G>T missense_variant ORF1ab_pp1ab R4925L 9.62e-1 BA.2
V2656 14840G>T missense_variant ORF1ab_pp1ab R4947L 9.62e-1 BA.2
V2657 14845G>T missense_variant ORF1ab_pp1ab V4949L 9.62e-1 BA.2
V2660 14917G>T missense_variant ORF1ab_pp1ab A4973S 8.27e-1 BA.2
V2680 15095G>T missense_variant ORF1ab_pp1ab R5032L 9.62e-1 BA.2
V2687 15128G>T missense_variant ORF1ab_pp1ab R5043L 9.49e-1 BA.2
V269 439G>T missense_variant ORF1ab_pp1a D147Y 8.92e-1 BA.2
V2695 15187G>T missense_variant ORF1ab_pp1ab G5063C 7.31e-1 BA.2
V270 442G>T stop_gained ORF1ab_pp1a E148* 9.62e-1 BA.2
V2702 15325G>T missense_variant ORF1ab_pp1ab D5109Y 9.62e-1 BA.2
V2706 15338G>T missense_variant ORF1ab_pp1ab R5113L 9.62e-1 BA.2
V2715 15415G>T missense_variant ORF1ab_pp1ab A5139S 8.11e-1 BA.2
V2716 15425G>T missense_variant ORF1ab_pp1ab R5142L 8.72e-1 BA.2
V2719 15457G>T missense_variant ORF1ab_pp1ab D5153Y 9.49e-1 BA.2
V2743 15697G>T missense_variant ORF1ab_pp1ab G5233C 9.62e-1 BA.2
V2745 15718G>T missense_variant ORF1ab_pp1ab V5240L 6.07e-1 BA.2
V2746 15749G>T missense_variant ORF1ab_pp1ab R5250L 9.49e-1 BA.2
V2747 15754G>T missense_variant ORF1ab_pp1ab V5252L 9.62e-1 BA.2
V2772 16034G>T missense_variant ORF1ab_pp1ab R5345L 8.89e-1 BA.2
V2796 16273G>T missense_variant ORF1ab_pp1ab D5425Y 9.11e-1 BA.2
V2812 16436G>T missense_variant ORF1ab_pp1ab R5479L 8.30e-1 BA.2
V2822 16505G>T missense_variant ORF1ab_pp1ab R5502L 9.49e-1 BA.2
V2823 16529G>T missense_variant ORF1ab_pp1ab R5510L 9.23e-1 BA.2
V2834 16607G>T missense_variant ORF1ab_pp1ab R5536L 9.35e-1 BA.2
V287 524G>T missense_variant ORF1ab_pp1a R175L 8.27e-1 BA.2
V2880 16880G>T missense_variant ORF1ab_pp1ab R5627L 8.68e-1 BA.2
V2884 16909G>T missense_variant ORF1ab_pp1ab A5637S 9.49e-1 BA.2
V289 535G>T stop_gained ORF1ab_pp1a G179* 9.62e-1 BA.2
V2894 16982G>T missense_variant ORF1ab_pp1ab R5661L 9.49e-1 BA.2
V2896 16988G>T missense_variant ORF1ab_pp1ab R5663L 8.22e-1 BA.2
V29 -142G>T upstream_gene_variant ORF1ab_pp1a None 7.90e-1 BA.2
V2919 17173G>T missense_variant ORF1ab_pp1ab D5725Y 9.49e-1 BA.2
V2923 17198G>T missense_variant ORF1ab_pp1ab R5733L 9.36e-1 BA.2
V2933 17287G>T stop_gained ORF1ab_pp1ab G5763* 9.62e-1 BA.2
V2935 17297G>T missense_variant ORF1ab_pp1ab R5766L 9.14e-1 BA.2
V2936 17300G>T missense_variant ORF1ab_pp1ab R5767L 9.62e-1 BA.2
V2956 17455G>T missense_variant ORF1ab_pp1ab V5819L 8.44e-1 BA.2
V296 551G>T missense_variant ORF1ab_pp1a R184L 8.92e-1 BA.2
V2960 17477G>T missense_variant ORF1ab_pp1ab R5826L 9.49e-1 BA.2
V297 559G>T missense_variant ORF1ab_pp1a D187Y 9.62e-1 BA.2
V2992 17753G>T missense_variant ORF1ab_pp1ab R5918L 9.22e-1 BA.2
V3039 18002G>T missense_variant ORF1ab_pp1ab R6001L 7.97e-1 BA.2
V3040 18004G>T stop_gained ORF1ab_pp1ab E6002* 9.49e-1 BA.2
V3045 18026G>T missense_variant ORF1ab_pp1ab R6009L 9.49e-1 BA.2
V3048 18043G>T missense_variant ORF1ab_pp1ab D6015Y 9.36e-1 BA.2
V3049 18049G>T stop_gained ORF1ab_pp1ab E6017* 9.49e-1 BA.2
V3085 18263G>T missense_variant ORF1ab_pp1ab R6088L 9.62e-1 BA.2
V3092 18319G>T missense_variant ORF1ab_pp1ab V6107L 6.17e-1 BA.2
V3102 18389G>T missense_variant ORF1ab_pp1ab R6130L 9.62e-1 BA.2
V3105 18413G>T missense_variant ORF1ab_pp1ab R6138L 8.72e-1 BA.2
V311 620G>T missense_variant ORF1ab_pp1a R207L 7.89e-1 BA.2
V3115 18481G>T missense_variant ORF1ab_pp1ab V6161F 6.50e-1 BA.2
V3130 18625G>T stop_gained ORF1ab_pp1ab E6209* 9.62e-1 BA.2
V3135 18641G>T missense_variant ORF1ab_pp1ab R6214L 8.92e-1 BA.2
V3187 18943G>T missense_variant ORF1ab_pp1ab D6315Y 9.36e-1 BA.2
V321 649G>T stop_gained ORF1ab_pp1a E217* 9.62e-1 BA.2
V3216 19202G>T missense_variant ORF1ab_pp1ab R6401L 9.36e-1 BA.2
V3254 19538G>T missense_variant ORF1ab_pp1ab R6513L 9.25e-1 BA.2
V3293 19769G>T missense_variant ORF1ab_pp1ab R6590L 9.62e-1 BA.2
V332 695G>T missense_variant ORF1ab_pp1a R232L 7.55e-1 BA.2
V3331 20027G>T missense_variant ORF1ab_pp1ab R6676L 9.62e-1 BA.2
V3334 20053G>T stop_gained ORF1ab_pp1ab E6685* 9.62e-1 BA.2
V3338 20062G>T missense_variant ORF1ab_pp1ab V6688F 8.92e-1 BA.2
V3345 20126G>T missense_variant ORF1ab_pp1ab R6709L 9.49e-1 BA.2
V336 731G>T missense_variant ORF1ab_pp1a R244L 9.62e-1 BA.2
V3415 20527G>T missense_variant ORF1ab_pp1ab A6843S 8.72e-1 BA.2
V3428 20683G>T missense_variant ORF1ab_pp1ab D6895Y 9.49e-1 BA.2
V3444 20791G>T missense_variant ORF1ab_pp1ab D6931Y 9.62e-1 BA.2
V3462 20893G>T missense_variant ORF1ab_pp1ab V6965L 8.86e-1 BA.2
V3475 20956G>T missense_variant ORF1ab_pp1ab A6986S 6.07e-1 BA.2
V3487 21041G>T missense_variant ORF1ab_pp1ab R7014L 9.09e-1 BA.2
V3488 21043G>T stop_gained ORF1ab_pp1ab E7015* 9.22e-1 BA.2
V3517 -5G>T upstream_gene_variant S None 9.62e-1 BA.2
V3562 101G>T missense_variant S R34L 9.22e-1 BA.2
V3621 367G>T missense_variant S A123S 7.49e-1 BA.2
V370 902G>T missense_variant ORF1ab_pp1a R301L 8.11e-1 BA.2
V38 -114G>T upstream_gene_variant ORF1ab_pp1a None 8.75e-1 BA.2
V3822 1030G>T missense_variant S A344S 8.25e-1 BA.2
V3857 1231G>T missense_variant S A411S 8.68e-1 BA.2
V3923 1478A>T missense_variant S Q493L 6.33e-1 BA.2
V3959 1730G>T missense_variant S R577L 9.03e-1 BA.2
V396 1003G>T missense_variant ORF1ab_pp1a D335Y 8.44e-1 BA.2
V3985 1901G>T missense_variant S R634L 9.49e-1 BA.2
V3991 1937G>T missense_variant S R646L 9.25e-1 BA.2
V4005 2014G>T missense_variant S A672S 9.49e-1 BA.2
V401 1024G>T stop_gained ORF1ab_pp1a E342* 9.49e-1 BA.2
V4025 2045G>T missense_variant S R682L 8.72e-1 BA.2
V4029 2054G>T missense_variant S R685L 9.62e-1 BA.2
V4109 2569G>T missense_variant S G857C 9.49e-1 BA.2
V4150 2948G>T missense_variant S R983L 8.34e-1 BA.2
V4185 3272G>T missense_variant S R1091L 7.09e-1 BA.2
V4235 3554G>T missense_variant S R1185L 8.98e-1 BA.2
V4244 3595G>T missense_variant S D1199Y 6.71e-1 BA.2
V4302 -6G>T upstream_gene_variant ORF3a None 9.62e-1 BA.2
V4347 91G>T missense_variant ORF3a A31S 6.27e-1 BA.2
V437 1156G>T stop_gained ORF1ab_pp1a E386* 9.62e-1 BA.2
V4379 130G>T stop_gained ORF3a G44* 9.03e-1 BA.2
V4391 148G>T missense_variant ORF3a V50F 6.89e-1 BA.2
V4410 175G>T missense_variant ORF3a A59S 6.54e-1 BA.2
V446 1193G>T missense_variant ORF1ab_pp1a R398L 9.25e-1 BA.2
V453 1205G>T missense_variant ORF1ab_pp1a R402L 9.62e-1 BA.2
V4614 751G>T missense_variant ORF3a G251C 6.39e-1 BA.2
V464 1277G>T missense_variant ORF1ab_pp1a R426L 6.13e-1 BA.2
V4672 70G>T missense_variant E V24L 7.99e-1 BA.2
V4678 145G>T missense_variant E V49L 7.68e-1 BA.2
V469 1285G>T missense_variant ORF1ab_pp1a A429S 8.92e-1 BA.2
V4722 16G>T missense_variant M G6C 8.15e-1 BA.2
V4763 247G>T missense_variant M A83S 6.62e-1 BA.2
V4772 320G>T missense_variant M R107L 8.20e-1 BA.2
V4782 473G>T missense_variant M R158L 7.08e-1 BA.2
V4784 521G>T missense_variant M R174L 7.54e-1 BA.2
V4788 593G>T missense_variant M R198L 8.66e-1 BA.2
V4812 59G>T missense_variant ORF6 R20M 6.36e-1 BA.2
V484 1330G>T stop_gained ORF1ab_pp1a E444* 9.49e-1 BA.2
V4864 37G>T missense_variant ORF7a A13S 7.96e-1 BA.2
V4895 121G>T stop_gained ORF7a E41* 7.09e-1 BA.2
V4930 208G>T missense_variant ORF7a G70C 6.35e-1 BA.2
V4943 233G>T missense_variant ORF7a R78L 6.53e-1 BA.2
V5056 127G>T missense_variant ORF7b A43S 6.27e-1 BA.2
V511 1420G>T missense_variant ORF1ab_pp1a A474S 9.25e-1 BA.2
V5173 223G>T missense_variant ORF8 D75Y 8.68e-1 BA.2
V5176 229G>T missense_variant ORF8 G77C 7.82e-1 BA.2
V5196 302G>T missense_variant ORF8 R101L 8.22e-1 BA.2
V5209 340G>T missense_variant ORF8 V114F 8.53e-1 BA.2
V5212 344G>T missense_variant ORF8 R115L 6.46e-1 BA.2
V5234 -12G>T upstream_gene_variant N None 9.25e-1 BA.2
V5266 29G>T missense_variant N R10L 8.72e-1 BA.2
V5277 41G>T missense_variant N R14L 8.92e-1 BA.2
V5324 107G>T missense_variant N R36L 7.37e-1 BA.2
V5333 122G>T missense_variant N R41L 6.62e-1 BA.2
V5345 203G>T missense_variant N R68L 7.37e-1 BA.2
V5349 214G>T missense_variant N V72F 9.49e-1 BA.2
V5355 263G>T missense_variant N R88L 9.37e-1 BA.2
V5359 278G>T missense_variant N R93L 8.63e-1 BA.2
V5361 284G>T missense_variant N R95L 8.04e-1 BA.2
V5364 295G>T missense_variant N G99C 8.63e-1 BA.2
V5379 385G>T missense_variant N G129C 8.63e-1 BA.2
V5395 446G>T missense_variant N R149L 9.62e-1 BA.2
V5404 472G>T missense_variant N V158L 8.19e-1 BA.2
V5414 517G>T missense_variant N A173S 8.63e-1 BA.2
V5429 554G>T missense_variant N R185L 8.44e-1 BA.2
V5437 572G>T missense_variant N R191L 6.62e-1 BA.2
V5536 776G>T missense_variant N R259L 9.37e-1 BA.2
V5537 785G>T missense_variant N R262L 9.49e-1 BA.2
V554 1625G>T missense_variant ORF1ab_pp1a R542L 7.37e-1 BA.2
V5546 823G>T missense_variant N G275C 9.49e-1 BA.2
V5547 830G>T missense_variant N R277L 9.62e-1 BA.2
V556 1634G>T missense_variant ORF1ab_pp1a R545L 8.82e-1 BA.2
V5566 946G>T stop_gained N G316* 9.62e-1 BA.2
V5570 956G>T missense_variant N R319L 9.49e-1 BA.2
V563 1649G>T missense_variant ORF1ab_pp1a R550L 9.37e-1 BA.2
V574 1679G>T missense_variant ORF1ab_pp1a R560L 8.53e-1 BA.2
V581 1696G>T missense_variant ORF1ab_pp1a A566S 8.44e-1 BA.2
V5970 726G>T synonymous_variant ORF1ab_pp1a T242T 6.58e-1 BA.2
V6010 999G>T synonymous_variant ORF1ab_pp1a T333T 6.17e-1 BA.2
V61 -68G>T upstream_gene_variant ORF1ab_pp1a None 7.46e-1 BA.2
V6121 1830G>T synonymous_variant ORF1ab_pp1a S610S 6.89e-1 BA.2
V6165 2133G>T synonymous_variant ORF1ab_pp1a T711T 7.31e-1 BA.2
V643 1933G>T missense_variant ORF1ab_pp1a G645C 8.58e-1 BA.2
V657 1981G>T missense_variant ORF1ab_pp1a G661C 7.96e-1 BA.2
V6634 5592G>T synonymous_variant ORF1ab_pp1a T1864T 7.96e-1 BA.2
V6686 6006G>T synonymous_variant ORF1ab_pp1a T2002T 7.96e-1 BA.2
V6704 6099G>T synonymous_variant ORF1ab_pp1a A2033A 8.44e-1 BA.2
V6765 6585G>T synonymous_variant ORF1ab_pp1a P2195P 7.61e-1 BA.2
V6908 7791G>T synonymous_variant ORF1ab_pp1a T2597T 8.44e-1 BA.2
V6950 8088G>T synonymous_variant ORF1ab_pp1a A2696A 7.62e-1 BA.2
V6952 8103G>T synonymous_variant ORF1ab_pp1a A2701A 7.43e-1 BA.2
V7140 9606G>T synonymous_variant ORF1ab_pp1a T3202T 8.36e-1 BA.2
V72 -58G>T upstream_gene_variant ORF1ab_pp1a None 8.16e-1 BA.2
V747 2359G>T missense_variant ORF1ab_pp1a G787W 9.37e-1 BA.2
V752 2374G>T stop_gained ORF1ab_pp1a E792* 9.62e-1 BA.2
V7559 12936G>T synonymous_variant ORF1ab_pp1a P4312P 6.31e-1 BA.2
V7567 12975G>T synonymous_variant ORF1ab_pp1a S4325S 6.49e-1 BA.2
V7602 13194G>T synonymous_variant ORF1ab_pp1a S4398S 6.25e-1 BA.2
V7604 13239G>T synonymous_variant ORF1ab_pp1ab P4413P 6.80e-1 BA.2
V762 2452G>T missense_variant ORF1ab_pp1a G818C 9.62e-1 BA.2
V7699 14004G>T synonymous_variant ORF1ab_pp1ab T4668T 6.31e-1 BA.2
V782 2593G>T missense_variant ORF1ab_pp1a G865C 7.97e-1 BA.2
V787 2614G>T missense_variant ORF1ab_pp1a A872S 8.86e-1 BA.2
V7951 15957G>T synonymous_variant ORF1ab_pp1ab P5319P 8.39e-1 BA.2
V8328 18696G>T synonymous_variant ORF1ab_pp1ab A6232A 7.55e-1 BA.2
V8519 20406G>T synonymous_variant ORF1ab_pp1ab A6802A 7.62e-1 BA.2
V8711 624G>T synonymous_variant S T208T 8.63e-1 BA.2
V882 2977G>T missense_variant ORF1ab_pp1a G993C 6.38e-1 BA.2
V9003 2883G>T synonymous_variant S T961T 7.89e-1 BA.2
V9253 801G>T synonymous_variant ORF3a P267P 6.86e-1 BA.2
V9274 108G>T synonymous_variant E A36A 8.30e-1 BA.2
V9550 309G>T synonymous_variant ORF8 S103S 7.17e-1 BA.2
V978 3319G>T stop_gained ORF1ab_pp1a G1107* 9.62e-1 BA.2
V1002 3424G>T stop_gained ORF1ab_pp1a E1142* 1.00e+0 AY.100
V1026 3509G>T missense_variant ORF1ab_pp1a R1170L 1.00e+0 AY.100
V103 -20G>T upstream_gene_variant ORF1ab_pp1a None 6.55e-1 AY.100
V1047 3610G>T missense_variant ORF1ab_pp1a A1204S 8.66e-1 AY.100
V11 -194G>T upstream_gene_variant ORF1ab_pp1a None 1.00e+0 AY.100
V111 -10G>T upstream_gene_variant ORF1ab_pp1a None 8.66e-1 AY.100
V1133 4127G>T missense_variant ORF1ab_pp1a R1376L 8.66e-1 AY.100
V1139 4157G>T missense_variant ORF1ab_pp1a R1386L 1.00e+0 AY.100
V1146 4211G>T missense_variant ORF1ab_pp1a R1404L 7.07e-1 AY.100
V1159 4318G>T missense_variant ORF1ab_pp1a D1440Y 8.66e-1 AY.100
V1164 4391G>T missense_variant ORF1ab_pp1a R1464L 8.66e-1 AY.100
V118 28G>T stop_gained ORF1ab_pp1a E10* 1.00e+0 AY.100
V124 71G>T missense_variant ORF1ab_pp1a R24L 1.00e+0 AY.100
V125 73G>T missense_variant ORF1ab_pp1a D25Y 1.00e+0 AY.100
V1252 4883G>T missense_variant ORF1ab_pp1a R1628L 7.75e-1 AY.100
V126 76G>T missense_variant ORF1ab_pp1a V26L 7.07e-1 AY.100
V1298 5248G>T missense_variant ORF1ab_pp1a V1750L 7.75e-1 AY.100
V132 86G>T missense_variant ORF1ab_pp1a R29L 1.00e+0 AY.100
V1345 5548G>T missense_variant ORF1ab_pp1a G1850C 8.66e-1 AY.100
V1374 5767G>T missense_variant ORF1ab_pp1a A1923S 1.00e+0 AY.100
V139 103G>T missense_variant ORF1ab_pp1a V35L 7.75e-1 AY.100
V1409 6032G>T missense_variant ORF1ab_pp1a R2011L 1.00e+0 AY.100
V1432 6097G>T missense_variant ORF1ab_pp1a A2033S 6.55e-1 AY.100
V1439 6124G>T stop_gained ORF1ab_pp1a E2042* 1.00e+0 AY.100
V146 128G>T missense_variant ORF1ab_pp1a R43L 1.00e+0 AY.100
V1464 6208G>T stop_gained ORF1ab_pp1a E2070* 1.00e+0 AY.100
V1546 6488G>T missense_variant ORF1ab_pp1a R2163L 1.00e+0 AY.100
V1565 6619G>T missense_variant ORF1ab_pp1a G2207C 7.07e-1 AY.100
V1578 6742G>T missense_variant ORF1ab_pp1a A2248S 1.00e+0 AY.100
V162 178G>T missense_variant ORF1ab_pp1a V60F 7.07e-1 AY.100
V1644 7207G>T missense_variant ORF1ab_pp1a G2403C 1.00e+0 AY.100
V1649 7244G>T missense_variant ORF1ab_pp1a R2415L 1.00e+0 AY.100
V1651 7264G>T stop_gained ORF1ab_pp1a E2422* 1.00e+0 AY.100
V1662 7471G>T missense_variant ORF1ab_pp1a V2491F 1.00e+0 AY.100
V168 218G>T missense_variant ORF1ab_pp1a R73L 1.00e+0 AY.100
V1712 7783G>T missense_variant ORF1ab_pp1a V2595F 1.00e+0 AY.100
V1716 7810G>T missense_variant ORF1ab_pp1a V2604L 8.66e-1 AY.100
V1743 7913G>T missense_variant ORF1ab_pp1a R2638L 1.00e+0 AY.100
V175 230G>T missense_variant ORF1ab_pp1a R77L 1.00e+0 AY.100
V1753 8002G>T missense_variant ORF1ab_pp1a D2668Y 1.00e+0 AY.100
V1760 8057G>T missense_variant ORF1ab_pp1a R2686L 1.00e+0 AY.100
V1766 8090G>T missense_variant ORF1ab_pp1a R2697L 1.00e+0 AY.100
V1774 8143G>T missense_variant ORF1ab_pp1a V2715F 1.00e+0 AY.100
V1777 8177G>T missense_variant ORF1ab_pp1a R2726L 1.00e+0 AY.100
V1778 8189G>T missense_variant ORF1ab_pp1a R2730L 1.00e+0 AY.100
V1819 8453G>T missense_variant ORF1ab_pp1a R2818L 1.00e+0 AY.100
V1829 8522G>T missense_variant ORF1ab_pp1a R2841L 1.00e+0 AY.100
V1846 8596G>T missense_variant ORF1ab_pp1a V2866L 1.00e+0 AY.100
V1857 8624G>T missense_variant ORF1ab_pp1a R2875L 1.00e+0 AY.100
V1883 8846G>T missense_variant ORF1ab_pp1a R2949L 1.00e+0 AY.100
V1886 8858G>T missense_variant ORF1ab_pp1a R2953L 8.66e-1 AY.100
V1900 8959G>T missense_variant ORF1ab_pp1a G2987C 1.00e+0 AY.100
V1961 9491G>T missense_variant ORF1ab_pp1a R3164L 1.00e+0 AY.100
V1964 9581G>T missense_variant ORF1ab_pp1a R3194L 1.00e+0 AY.100
V1979 9703G>T missense_variant ORF1ab_pp1a A3235S 1.00e+0 AY.100
V1993 9874G>T missense_variant ORF1ab_pp1a G3292C 1.00e+0 AY.100
V1997 9892G>T missense_variant ORF1ab_pp1a V3298L 8.66e-1 AY.100
V2005 9968G>T missense_variant ORF1ab_pp1a R3323L 1.00e+0 AY.100
V2030 10103G>T missense_variant ORF1ab_pp1a R3368L 1.00e+0 AY.100
V2055 10417G>T missense_variant ORF1ab_pp1a A3473S 1.00e+0 AY.100
V2060 10454G>T missense_variant ORF1ab_pp1a R3485L 7.07e-1 AY.100
V207 277G>T stop_gained ORF1ab_pp1a E93* 1.00e+0 AY.100
V2079 10570G>T missense_variant ORF1ab_pp1a V3524F 8.66e-1 AY.100
V2087 10625G>T missense_variant ORF1ab_pp1a R3542L 1.00e+0 AY.100
V212 292G>T missense_variant ORF1ab_pp1a G98C 1.00e+0 AY.100
V215 296G>T missense_variant ORF1ab_pp1a R99L 1.00e+0 AY.100
V2151 10985G>T missense_variant ORF1ab_pp1a R3662L 1.00e+0 AY.100
V2238 11405G>T missense_variant ORF1ab_pp1a R3802L 1.00e+0 AY.100
V228 337G>T stop_gained ORF1ab_pp1a E113* 1.00e+0 AY.100
V2310 11978G>T missense_variant ORF1ab_pp1a R3993L 1.00e+0 AY.100
V2313 11996G>T missense_variant ORF1ab_pp1a R3999L 1.00e+0 AY.100
V2358 12449G>T missense_variant ORF1ab_pp1a R4150L 1.00e+0 AY.100
V2362 12469G>T missense_variant ORF1ab_pp1a G4157C 1.00e+0 AY.100
V2386 12559G>T missense_variant ORF1ab_pp1a D4187Y 1.00e+0 AY.100
V239 356G>T missense_variant ORF1ab_pp1a R119L 1.00e+0 AY.100
V2406 12752G>T missense_variant ORF1ab_pp1a R4251L 1.00e+0 AY.100
V2424 12992G>T missense_variant ORF1ab_pp1a R4331L 1.00e+0 AY.100
V243 371G>T missense_variant ORF1ab_pp1a R124L 1.00e+0 AY.100
V2438 13114G>T missense_variant ORF1ab_pp1a V4372F 8.66e-1 AY.100
V2439 13120G>T missense_variant ORF1ab_pp1a G4374C 1.00e+0 AY.100
V2445 13160G>T missense_variant ORF1ab_pp1a R4387L 7.07e-1 AY.100
V2446 13162G>T stop_gained ORF1ab_pp1a E4388* 1.00e+0 AY.100
V245 379G>T missense_variant ORF1ab_pp1a G127C 8.66e-1 AY.100
V2452 13204G>T missense_variant ORF1ab_pp1a G4402W 1.00e+0 AY.100
V2453 13213G>T missense_variant ORF1ab_pp1ab G4405C 1.00e+0 AY.100
V2456 13229G>T missense_variant ORF1ab_pp1ab R4410L 1.00e+0 AY.100
V2459 13243G>T missense_variant ORF1ab_pp1ab G4415C 1.00e+0 AY.100
V2463 13267G>T missense_variant ORF1ab_pp1ab V4423L 1.00e+0 AY.100
V2470 13340G>T missense_variant ORF1ab_pp1ab R4447L 1.00e+0 AY.100
V2474 13357G>T stop_gained ORF1ab_pp1ab E4453* 8.16e-1 AY.100
V2496 13498G>T missense_variant ORF1ab_pp1ab G4500C 1.00e+0 AY.100
V2500 13523G>T missense_variant ORF1ab_pp1ab R4508L 1.00e+0 AY.100
V2503 13529G>T missense_variant ORF1ab_pp1ab R4510L 1.00e+0 AY.100
V2507 13558G>T missense_variant ORF1ab_pp1ab V4520F 1.00e+0 AY.100
V251 409G>T missense_variant ORF1ab_pp1a G137C 6.12e-1 AY.100
V2528 13694G>T missense_variant ORF1ab_pp1ab R4565L 1.00e+0 AY.100
V2529 13696G>T missense_variant ORF1ab_pp1ab V4566L 8.66e-1 AY.100
V2532 13702G>T missense_variant ORF1ab_pp1ab A4568S 1.00e+0 AY.100
V2534 13718G>T missense_variant ORF1ab_pp1ab R4573L 8.66e-1 AY.100
V2535 13724G>T missense_variant ORF1ab_pp1ab R4575L 1.00e+0 AY.100
V2540 13766G>T missense_variant ORF1ab_pp1ab R4589L 1.00e+0 AY.100
V2543 13834G>T missense_variant ORF1ab_pp1ab G4612C 1.00e+0 AY.100
V255 412G>T missense_variant ORF1ab_pp1a A138S 1.00e+0 AY.100
V257 415G>T missense_variant ORF1ab_pp1a D139Y 7.75e-1 AY.100
V2584 14030G>T missense_variant ORF1ab_pp1ab R4677L 1.00e+0 AY.100
V2612 14320G>T missense_variant ORF1ab_pp1ab A4774S 8.66e-1 AY.100
V2615 14351G>T missense_variant ORF1ab_pp1ab R4784L 1.00e+0 AY.100
V2620 14413G>T missense_variant ORF1ab_pp1ab G4805C 1.00e+0 AY.100
V2631 14530G>T missense_variant ORF1ab_pp1ab D4844Y 1.00e+0 AY.100
V2632 14546G>T missense_variant ORF1ab_pp1ab R4849L 1.00e+0 AY.100
V2641 14659G>T missense_variant ORF1ab_pp1ab V4887F 1.00e+0 AY.100
V2654 14774G>T missense_variant ORF1ab_pp1ab R4925L 8.66e-1 AY.100
V2656 14840G>T missense_variant ORF1ab_pp1ab R4947L 1.00e+0 AY.100
V2657 14845G>T missense_variant ORF1ab_pp1ab V4949L 7.75e-1 AY.100
V2660 14917G>T missense_variant ORF1ab_pp1ab A4973S 1.00e+0 AY.100
V2680 15095G>T missense_variant ORF1ab_pp1ab R5032L 1.00e+0 AY.100
V2687 15128G>T missense_variant ORF1ab_pp1ab R5043L 1.00e+0 AY.100
V269 439G>T missense_variant ORF1ab_pp1a D147Y 8.66e-1 AY.100
V270 442G>T stop_gained ORF1ab_pp1a E148* 1.00e+0 AY.100
V2702 15325G>T missense_variant ORF1ab_pp1ab D5109Y 1.00e+0 AY.100
V2706 15338G>T missense_variant ORF1ab_pp1ab R5113L 1.00e+0 AY.100
V2715 15415G>T missense_variant ORF1ab_pp1ab A5139S 1.00e+0 AY.100
V2716 15425G>T missense_variant ORF1ab_pp1ab R5142L 8.66e-1 AY.100
V2719 15457G>T missense_variant ORF1ab_pp1ab D5153Y 1.00e+0 AY.100
V2743 15697G>T missense_variant ORF1ab_pp1ab G5233C 1.00e+0 AY.100
V2746 15749G>T missense_variant ORF1ab_pp1ab R5250L 1.00e+0 AY.100
V2747 15754G>T missense_variant ORF1ab_pp1ab V5252L 1.00e+0 AY.100
V2772 16034G>T missense_variant ORF1ab_pp1ab R5345L 1.00e+0 AY.100
V2796 16273G>T missense_variant ORF1ab_pp1ab D5425Y 8.66e-1 AY.100
V2812 16436G>T missense_variant ORF1ab_pp1ab R5479L 6.12e-1 AY.100
V2822 16505G>T missense_variant ORF1ab_pp1ab R5502L 1.00e+0 AY.100
V2823 16529G>T missense_variant ORF1ab_pp1ab R5510L 1.00e+0 AY.100
V2834 16607G>T missense_variant ORF1ab_pp1ab R5536L 8.66e-1 AY.100
V285 512G>T missense_variant ORF1ab_pp1a R171L 8.66e-1 AY.100
V287 524G>T missense_variant ORF1ab_pp1a R175L 7.75e-1 AY.100
V2880 16880G>T missense_variant ORF1ab_pp1ab R5627L 1.00e+0 AY.100
V2884 16909G>T missense_variant ORF1ab_pp1ab A5637S 1.00e+0 AY.100
V289 535G>T stop_gained ORF1ab_pp1a G179* 1.00e+0 AY.100
V2894 16982G>T missense_variant ORF1ab_pp1ab R5661L 1.00e+0 AY.100
V2896 16988G>T missense_variant ORF1ab_pp1ab R5663L 1.00e+0 AY.100
V29 -142G>T upstream_gene_variant ORF1ab_pp1a None 1.00e+0 AY.100
V2919 17173G>T missense_variant ORF1ab_pp1ab D5725Y 1.00e+0 AY.100
V2923 17198G>T missense_variant ORF1ab_pp1ab R5733L 1.00e+0 AY.100
V2933 17287G>T stop_gained ORF1ab_pp1ab G5763* 1.00e+0 AY.100
V2935 17297G>T missense_variant ORF1ab_pp1ab R5766L 1.00e+0 AY.100
V2936 17300G>T missense_variant ORF1ab_pp1ab R5767L 1.00e+0 AY.100
V2956 17455G>T missense_variant ORF1ab_pp1ab V5819L 1.00e+0 AY.100
V2960 17477G>T missense_variant ORF1ab_pp1ab R5826L 1.00e+0 AY.100
V297 559G>T missense_variant ORF1ab_pp1a D187Y 1.00e+0 AY.100
V2992 17753G>T missense_variant ORF1ab_pp1ab R5918L 1.00e+0 AY.100
V3039 18002G>T missense_variant ORF1ab_pp1ab R6001L 8.66e-1 AY.100
V3040 18004G>T stop_gained ORF1ab_pp1ab E6002* 8.66e-1 AY.100
V3045 18026G>T missense_variant ORF1ab_pp1ab R6009L 1.00e+0 AY.100
V3048 18043G>T missense_variant ORF1ab_pp1ab D6015Y 1.00e+0 AY.100
V3049 18049G>T stop_gained ORF1ab_pp1ab E6017* 1.00e+0 AY.100
V3085 18263G>T missense_variant ORF1ab_pp1ab R6088L 8.66e-1 AY.100
V3102 18389G>T missense_variant ORF1ab_pp1ab R6130L 1.00e+0 AY.100
V311 620G>T missense_variant ORF1ab_pp1a R207L 7.75e-1 AY.100
V3115 18481G>T missense_variant ORF1ab_pp1ab V6161F 8.66e-1 AY.100
V3130 18625G>T stop_gained ORF1ab_pp1ab E6209* 1.00e+0 AY.100
V3135 18641G>T missense_variant ORF1ab_pp1ab R6214L 1.00e+0 AY.100
V3187 18943G>T missense_variant ORF1ab_pp1ab D6315Y 6.67e-1 AY.100
V321 649G>T stop_gained ORF1ab_pp1a E217* 1.00e+0 AY.100
V3216 19202G>T missense_variant ORF1ab_pp1ab R6401L 8.16e-1 AY.100
V3254 19538G>T missense_variant ORF1ab_pp1ab R6513L 1.00e+0 AY.100
V3293 19769G>T missense_variant ORF1ab_pp1ab R6590L 6.55e-1 AY.100
V332 695G>T missense_variant ORF1ab_pp1a R232L 1.00e+0 AY.100
V3331 20027G>T missense_variant ORF1ab_pp1ab R6676L 1.00e+0 AY.100
V3334 20053G>T stop_gained ORF1ab_pp1ab E6685* 1.00e+0 AY.100
V3338 20062G>T missense_variant ORF1ab_pp1ab V6688F 8.66e-1 AY.100
V3345 20126G>T missense_variant ORF1ab_pp1ab R6709L 6.55e-1 AY.100
V336 731G>T missense_variant ORF1ab_pp1a R244L 1.00e+0 AY.100
V3415 20527G>T missense_variant ORF1ab_pp1ab A6843S 1.00e+0 AY.100
V3428 20683G>T missense_variant ORF1ab_pp1ab D6895Y 1.00e+0 AY.100
V3444 20791G>T missense_variant ORF1ab_pp1ab D6931Y 1.00e+0 AY.100
V3462 20893G>T missense_variant ORF1ab_pp1ab V6965L 1.00e+0 AY.100
V3487 21041G>T missense_variant ORF1ab_pp1ab R7014L 1.00e+0 AY.100
V3488 21043G>T stop_gained ORF1ab_pp1ab E7015* 1.00e+0 AY.100
V3517 -5G>T upstream_gene_variant S None 1.00e+0 AY.100
V3562 101G>T missense_variant S R34L 8.66e-1 AY.100
V3621 367G>T missense_variant S A123S 1.00e+0 AY.100
V370 902G>T missense_variant ORF1ab_pp1a R301L 1.00e+0 AY.100
V38 -114G>T upstream_gene_variant ORF1ab_pp1a None 8.66e-1 AY.100
V3959 1730G>T missense_variant S R577L 1.00e+0 AY.100
V396 1003G>T missense_variant ORF1ab_pp1a D335Y 1.00e+0 AY.100
V3985 1901G>T missense_variant S R634L 1.00e+0 AY.100
V3991 1937G>T missense_variant S R646L 1.00e+0 AY.100
V4005 2014G>T missense_variant S A672S 1.00e+0 AY.100
V401 1024G>T stop_gained ORF1ab_pp1a E342* 1.00e+0 AY.100
V4025 2045G>T missense_variant S R682L 8.66e-1 AY.100
V4029 2054G>T missense_variant S R685L 1.00e+0 AY.100
V41 -101G>T upstream_gene_variant ORF1ab_pp1a None 6.12e-1 AY.100
V4109 2569G>T missense_variant S G857C 8.66e-1 AY.100
V4150 2948G>T missense_variant S R983L 1.00e+0 AY.100
V4235 3554G>T missense_variant S R1185L 1.00e+0 AY.100
V4302 -6G>T upstream_gene_variant ORF3a None 1.00e+0 AY.100
V4347 91G>T missense_variant ORF3a A31S 6.12e-1 AY.100
V437 1156G>T stop_gained ORF1ab_pp1a E386* 1.00e+0 AY.100
V4379 130G>T stop_gained ORF3a G44* 8.66e-1 AY.100
V4459 289G>T missense_variant ORF3a V97F 6.12e-1 AY.100
V446 1193G>T missense_variant ORF1ab_pp1a R398L 1.00e+0 AY.100
V453 1205G>T missense_variant ORF1ab_pp1a R402L 1.00e+0 AY.100
V4614 751G>T missense_variant ORF3a G251C 8.66e-1 AY.100
V464 1277G>T missense_variant ORF1ab_pp1a R426L 6.12e-1 AY.100
V4672 70G>T missense_variant E V24L 7.07e-1 AY.100
V4686 182G>T missense_variant E R61L 7.07e-1 AY.100
V469 1285G>T missense_variant ORF1ab_pp1a A429S 1.00e+0 AY.100
V4722 16G>T missense_variant M G6C 7.75e-1 AY.100
V4763 247G>T missense_variant M A83S 8.66e-1 AY.100
V4772 320G>T missense_variant M R107L 1.00e+0 AY.100
V4784 521G>T missense_variant M R174L 6.12e-1 AY.100
V4788 593G>T missense_variant M R198L 8.66e-1 AY.100
V4800 13G>T missense_variant ORF6 V5F 6.55e-1 AY.100
V484 1330G>T stop_gained ORF1ab_pp1a E444* 1.00e+0 AY.100
V4864 37G>T missense_variant ORF7a A13S 1.00e+0 AY.100
V4932 211G>T missense_variant ORF7a V71L 7.07e-1 AY.100
V4937 220G>T missense_variant ORF7a V74F 8.66e-1 AY.100
V4943 233G>T missense_variant ORF7a R78L 7.75e-1 AY.100
V5061 -4G>T upstream_gene_variant ORF8 None 8.66e-1 AY.100
V511 1420G>T missense_variant ORF1ab_pp1a A474S 1.00e+0 AY.100
V5234 -12G>T upstream_gene_variant N None 8.66e-1 AY.100
V5266 29G>T missense_variant N R10L 1.00e+0 AY.100
V5324 107G>T missense_variant N R36L 7.75e-1 AY.100
V5345 203G>T missense_variant N R68L 1.00e+0 AY.100
V5349 214G>T missense_variant N V72F 1.00e+0 AY.100
V5355 263G>T missense_variant N R88L 1.00e+0 AY.100
V5359 278G>T missense_variant N R93L 1.00e+0 AY.100
V5361 284G>T missense_variant N R95L 7.07e-1 AY.100
V5364 295G>T missense_variant N G99C 1.00e+0 AY.100
V5379 385G>T missense_variant N G129C 1.00e+0 AY.100
V5395 446G>T missense_variant N R149L 1.00e+0 AY.100
V5404 472G>T missense_variant N V158L 8.66e-1 AY.100
V5414 517G>T missense_variant N A173S 6.55e-1 AY.100
V5419 535G>T missense_variant N G179C 1.00e+0 AY.100
V5429 554G>T missense_variant N R185L 8.66e-1 AY.100
V5437 572G>T missense_variant N R191L 7.07e-1 AY.100
V5536 776G>T missense_variant N R259L 7.75e-1 AY.100
V5537 785G>T missense_variant N R262L 8.66e-1 AY.100
V554 1625G>T missense_variant ORF1ab_pp1a R542L 6.12e-1 AY.100
V5546 823G>T missense_variant N G275C 1.00e+0 AY.100
V5547 830G>T missense_variant N R277L 1.00e+0 AY.100
V556 1634G>T missense_variant ORF1ab_pp1a R545L 6.12e-1 AY.100
V5565 931G>T missense_variant N A311S 7.75e-1 AY.100
V5566 946G>T stop_gained N G316* 1.00e+0 AY.100
V5570 956G>T missense_variant N R319L 1.00e+0 AY.100
V563 1649G>T missense_variant ORF1ab_pp1a R550L 1.00e+0 AY.100
V5688 16G>T missense_variant ORF10 V6F 6.12e-1 AY.100
V574 1679G>T missense_variant ORF1ab_pp1a R560L 7.75e-1 AY.100
V6121 1830G>T synonymous_variant ORF1ab_pp1a S610S 1.00e+0 AY.100
V6165 2133G>T synonymous_variant ORF1ab_pp1a T711T 7.75e-1 AY.100
V643 1933G>T missense_variant ORF1ab_pp1a G645C 7.75e-1 AY.100
V657 1981G>T missense_variant ORF1ab_pp1a G661C 7.75e-1 AY.100
V6686 6006G>T synonymous_variant ORF1ab_pp1a T2002T 7.75e-1 AY.100
V6695 6072G>T synonymous_variant ORF1ab_pp1a S2024S 6.55e-1 AY.100
V6704 6099G>T synonymous_variant ORF1ab_pp1a A2033A 7.07e-1 AY.100
V6765 6585G>T synonymous_variant ORF1ab_pp1a P2195P 7.07e-1 AY.100
V6908 7791G>T synonymous_variant ORF1ab_pp1a T2597T 8.66e-1 AY.100
V6952 8103G>T synonymous_variant ORF1ab_pp1a A2701A 7.75e-1 AY.100
V7140 9606G>T synonymous_variant ORF1ab_pp1a T3202T 1.00e+0 AY.100
V747 2359G>T missense_variant ORF1ab_pp1a G787W 8.66e-1 AY.100
V752 2374G>T stop_gained ORF1ab_pp1a E792* 1.00e+0 AY.100
V762 2452G>T missense_variant ORF1ab_pp1a G818C 1.00e+0 AY.100
V7699 14004G>T synonymous_variant ORF1ab_pp1ab T4668T 7.75e-1 AY.100
V782 2593G>T missense_variant ORF1ab_pp1a G865C 8.66e-1 AY.100
V787 2614G>T missense_variant ORF1ab_pp1a A872S 7.07e-1 AY.100
V7951 15957G>T synonymous_variant ORF1ab_pp1ab P5319P 6.12e-1 AY.100
V8328 18696G>T synonymous_variant ORF1ab_pp1ab A6232A 7.75e-1 AY.100
V8388 19191G>T synonymous_variant ORF1ab_pp1ab T6397T 8.16e-1 AY.100
V8502 20205G>T synonymous_variant ORF1ab_pp1ab A6735A 1.00e+0 AY.100
V8519 20406G>T synonymous_variant ORF1ab_pp1ab A6802A 7.75e-1 AY.100
V8549 20673G>T synonymous_variant ORF1ab_pp1ab T6891T 7.75e-1 AY.100
V8678 336G>T synonymous_variant S S112S 7.07e-1 AY.100
V8711 624G>T synonymous_variant S T208T 1.00e+0 AY.100
V9154 108G>T synonymous_variant ORF3a P36P 8.66e-1 AY.100
V9253 801G>T synonymous_variant ORF3a P267P 8.66e-1 AY.100
V9254 804G>T synonymous_variant ORF3a T268T 1.00e+0 AY.100
V9262 18G>T synonymous_variant E S6S 6.55e-1 AY.100
V9274 108G>T synonymous_variant E A36A 1.00e+0 AY.100
V9381 552G>T synonymous_variant M S184S 6.12e-1 AY.100
V9480 315G>T synonymous_variant ORF7a A105A 7.07e-1 AY.100
V9596 150G>T synonymous_variant N A50A 7.07e-1 AY.100
V978 3319G>T stop_gained ORF1ab_pp1a G1107* 1.00e+0 AY.100
V1002 3424G>T stop_gained ORF1ab_pp1a E1142* 6.67e-1 BA.1.15
V1026 3509G>T missense_variant ORF1ab_pp1a R1170L 8.16e-1 BA.1.15
V1047 3610G>T missense_variant ORF1ab_pp1a A1204S 6.67e-1 BA.1.15
V11 -194G>T upstream_gene_variant ORF1ab_pp1a None 8.16e-1 BA.1.15
V111 -10G>T upstream_gene_variant ORF1ab_pp1a None 8.16e-1 BA.1.15
V1133 4127G>T missense_variant ORF1ab_pp1a R1376L 8.16e-1 BA.1.15
V1139 4157G>T missense_variant ORF1ab_pp1a R1386L 8.16e-1 BA.1.15
V1146 4211G>T missense_variant ORF1ab_pp1a R1404L 8.16e-1 BA.1.15
V1159 4318G>T missense_variant ORF1ab_pp1a D1440Y 8.16e-1 BA.1.15
V118 28G>T stop_gained ORF1ab_pp1a E10* 8.16e-1 BA.1.15
V120 40G>T missense_variant ORF1ab_pp1a V14F 8.16e-1 BA.1.15
V124 71G>T missense_variant ORF1ab_pp1a R24L 8.16e-1 BA.1.15
V125 73G>T missense_variant ORF1ab_pp1a D25Y 8.16e-1 BA.1.15
V126 76G>T missense_variant ORF1ab_pp1a V26L 6.67e-1 BA.1.15
V1298 5248G>T missense_variant ORF1ab_pp1a V1750L 6.67e-1 BA.1.15
V130 82G>T missense_variant ORF1ab_pp1a V28L 6.67e-1 BA.1.15
V139 103G>T missense_variant ORF1ab_pp1a V35L 6.67e-1 BA.1.15
V1439 6124G>T stop_gained ORF1ab_pp1a E2042* 8.16e-1 BA.1.15
V146 128G>T missense_variant ORF1ab_pp1a R43L 8.16e-1 BA.1.15
V1464 6208G>T stop_gained ORF1ab_pp1a E2070* 8.16e-1 BA.1.15
V1544 6476G>T missense_variant ORF1ab_pp1a R2159L 6.67e-1 BA.1.15
V1578 6742G>T missense_variant ORF1ab_pp1a A2248S 8.16e-1 BA.1.15
V162 178G>T missense_variant ORF1ab_pp1a V60F 6.67e-1 BA.1.15
V1644 7207G>T missense_variant ORF1ab_pp1a G2403C 8.16e-1 BA.1.15
V1649 7244G>T missense_variant ORF1ab_pp1a R2415L 8.16e-1 BA.1.15
V1651 7264G>T stop_gained ORF1ab_pp1a E2422* 8.16e-1 BA.1.15
V1662 7471G>T missense_variant ORF1ab_pp1a V2491F 8.16e-1 BA.1.15
V168 218G>T missense_variant ORF1ab_pp1a R73L 8.16e-1 BA.1.15
V1712 7783G>T missense_variant ORF1ab_pp1a V2595F 8.16e-1 BA.1.15
V1716 7810G>T missense_variant ORF1ab_pp1a V2604L 8.16e-1 BA.1.15
V1743 7913G>T missense_variant ORF1ab_pp1a R2638L 8.16e-1 BA.1.15
V175 230G>T missense_variant ORF1ab_pp1a R77L 6.67e-1 BA.1.15
V1753 8002G>T missense_variant ORF1ab_pp1a D2668Y 8.16e-1 BA.1.15
V1760 8057G>T missense_variant ORF1ab_pp1a R2686L 8.16e-1 BA.1.15
V1777 8177G>T missense_variant ORF1ab_pp1a R2726L 8.16e-1 BA.1.15
V1778 8189G>T missense_variant ORF1ab_pp1a R2730L 8.16e-1 BA.1.15
V1819 8453G>T missense_variant ORF1ab_pp1a R2818L 8.16e-1 BA.1.15
V1829 8522G>T missense_variant ORF1ab_pp1a R2841L 6.67e-1 BA.1.15
V1846 8596G>T missense_variant ORF1ab_pp1a V2866L 8.16e-1 BA.1.15
V1857 8624G>T missense_variant ORF1ab_pp1a R2875L 8.16e-1 BA.1.15
V1883 8846G>T missense_variant ORF1ab_pp1a R2949L 8.16e-1 BA.1.15
V1886 8858G>T missense_variant ORF1ab_pp1a R2953L 8.16e-1 BA.1.15
V1900 8959G>T missense_variant ORF1ab_pp1a G2987C 8.16e-1 BA.1.15
V1961 9491G>T missense_variant ORF1ab_pp1a R3164L 8.16e-1 BA.1.15
V1964 9581G>T missense_variant ORF1ab_pp1a R3194L 8.16e-1 BA.1.15
V1993 9874G>T missense_variant ORF1ab_pp1a G3292C 8.16e-1 BA.1.15
V1997 9892G>T missense_variant ORF1ab_pp1a V3298L 8.16e-1 BA.1.15
V2005 9968G>T missense_variant ORF1ab_pp1a R3323L 8.16e-1 BA.1.15
V2030 10103G>T missense_variant ORF1ab_pp1a R3368L 6.67e-1 BA.1.15
V2055 10417G>T missense_variant ORF1ab_pp1a A3473S 8.16e-1 BA.1.15
V207 277G>T stop_gained ORF1ab_pp1a E93* 8.16e-1 BA.1.15
V2079 10570G>T missense_variant ORF1ab_pp1a V3524F 8.16e-1 BA.1.15
V2087 10625G>T missense_variant ORF1ab_pp1a R3542L 8.16e-1 BA.1.15
V215 296G>T missense_variant ORF1ab_pp1a R99L 6.67e-1 BA.1.15
V2238 11405G>T missense_variant ORF1ab_pp1a R3802L 6.67e-1 BA.1.15
V228 337G>T stop_gained ORF1ab_pp1a E113* 8.16e-1 BA.1.15
V2310 11978G>T missense_variant ORF1ab_pp1a R3993L 6.67e-1 BA.1.15
V2313 11996G>T missense_variant ORF1ab_pp1a R3999L 6.67e-1 BA.1.15
V2358 12449G>T missense_variant ORF1ab_pp1a R4150L 6.67e-1 BA.1.15
V2362 12469G>T missense_variant ORF1ab_pp1a G4157C 6.67e-1 BA.1.15
V2386 12559G>T missense_variant ORF1ab_pp1a D4187Y 8.16e-1 BA.1.15
V239 356G>T missense_variant ORF1ab_pp1a R119L 6.67e-1 BA.1.15
V2406 12752G>T missense_variant ORF1ab_pp1a R4251L 8.16e-1 BA.1.15
V2424 12992G>T missense_variant ORF1ab_pp1a R4331L 8.16e-1 BA.1.15
V243 371G>T missense_variant ORF1ab_pp1a R124L 8.16e-1 BA.1.15
V2438 13114G>T missense_variant ORF1ab_pp1a V4372F 8.16e-1 BA.1.15
V2445 13160G>T missense_variant ORF1ab_pp1a R4387L 8.16e-1 BA.1.15
V2446 13162G>T stop_gained ORF1ab_pp1a E4388* 8.16e-1 BA.1.15
V245 379G>T missense_variant ORF1ab_pp1a G127C 6.67e-1 BA.1.15
V2452 13204G>T missense_variant ORF1ab_pp1a G4402W 8.16e-1 BA.1.15
V2453 13213G>T missense_variant ORF1ab_pp1ab G4405C 8.16e-1 BA.1.15
V2456 13229G>T missense_variant ORF1ab_pp1ab R4410L 8.16e-1 BA.1.15
V2459 13243G>T missense_variant ORF1ab_pp1ab G4415C 8.16e-1 BA.1.15
V2463 13267G>T missense_variant ORF1ab_pp1ab V4423L 8.16e-1 BA.1.15
V2470 13340G>T missense_variant ORF1ab_pp1ab R4447L 6.67e-1 BA.1.15
V2474 13357G>T stop_gained ORF1ab_pp1ab E4453* 8.16e-1 BA.1.15
V2500 13523G>T missense_variant ORF1ab_pp1ab R4508L 8.16e-1 BA.1.15
V2507 13558G>T missense_variant ORF1ab_pp1ab V4520F 8.16e-1 BA.1.15
V251 409G>T missense_variant ORF1ab_pp1a G137C 6.67e-1 BA.1.15
V2528 13694G>T missense_variant ORF1ab_pp1ab R4565L 6.67e-1 BA.1.15
V2529 13696G>T missense_variant ORF1ab_pp1ab V4566L 8.16e-1 BA.1.15
V2532 13702G>T missense_variant ORF1ab_pp1ab A4568S 8.16e-1 BA.1.15
V2534 13718G>T missense_variant ORF1ab_pp1ab R4573L 8.16e-1 BA.1.15
V2535 13724G>T missense_variant ORF1ab_pp1ab R4575L 8.16e-1 BA.1.15
V2540 13766G>T missense_variant ORF1ab_pp1ab R4589L 6.67e-1 BA.1.15
V2543 13834G>T missense_variant ORF1ab_pp1ab G4612C 8.16e-1 BA.1.15
V257 415G>T missense_variant ORF1ab_pp1a D139Y 6.67e-1 BA.1.15
V2584 14030G>T missense_variant ORF1ab_pp1ab R4677L 8.16e-1 BA.1.15
V2612 14320G>T missense_variant ORF1ab_pp1ab A4774S 6.67e-1 BA.1.15
V2615 14351G>T missense_variant ORF1ab_pp1ab R4784L 8.16e-1 BA.1.15
V2620 14413G>T missense_variant ORF1ab_pp1ab G4805C 6.67e-1 BA.1.15
V2631 14530G>T missense_variant ORF1ab_pp1ab D4844Y 8.16e-1 BA.1.15
V2632 14546G>T missense_variant ORF1ab_pp1ab R4849L 8.16e-1 BA.1.15
V2641 14659G>T missense_variant ORF1ab_pp1ab V4887F 8.16e-1 BA.1.15
V2654 14774G>T missense_variant ORF1ab_pp1ab R4925L 8.16e-1 BA.1.15
V2656 14840G>T missense_variant ORF1ab_pp1ab R4947L 6.67e-1 BA.1.15
V2657 14845G>T missense_variant ORF1ab_pp1ab V4949L 8.16e-1 BA.1.15
V2660 14917G>T missense_variant ORF1ab_pp1ab A4973S 8.16e-1 BA.1.15
V2680 15095G>T missense_variant ORF1ab_pp1ab R5032L 6.67e-1 BA.1.15
V2687 15128G>T missense_variant ORF1ab_pp1ab R5043L 8.16e-1 BA.1.15
V270 442G>T stop_gained ORF1ab_pp1a E148* 8.16e-1 BA.1.15
V2702 15325G>T missense_variant ORF1ab_pp1ab D5109Y 8.16e-1 BA.1.15
V2706 15338G>T missense_variant ORF1ab_pp1ab R5113L 8.16e-1 BA.1.15
V2715 15415G>T missense_variant ORF1ab_pp1ab A5139S 8.16e-1 BA.1.15
V2716 15425G>T missense_variant ORF1ab_pp1ab R5142L 6.67e-1 BA.1.15
V2719 15457G>T missense_variant ORF1ab_pp1ab D5153Y 8.16e-1 BA.1.15
V2743 15697G>T missense_variant ORF1ab_pp1ab G5233C 6.67e-1 BA.1.15
V2746 15749G>T missense_variant ORF1ab_pp1ab R5250L 8.16e-1 BA.1.15
V2747 15754G>T missense_variant ORF1ab_pp1ab V5252L 8.16e-1 BA.1.15
V2772 16034G>T missense_variant ORF1ab_pp1ab R5345L 8.16e-1 BA.1.15
V2796 16273G>T missense_variant ORF1ab_pp1ab D5425Y 8.16e-1 BA.1.15
V2812 16436G>T missense_variant ORF1ab_pp1ab R5479L 8.16e-1 BA.1.15
V2822 16505G>T missense_variant ORF1ab_pp1ab R5502L 6.67e-1 BA.1.15
V2823 16529G>T missense_variant ORF1ab_pp1ab R5510L 8.16e-1 BA.1.15
V2834 16607G>T missense_variant ORF1ab_pp1ab R5536L 6.67e-1 BA.1.15
V285 512G>T missense_variant ORF1ab_pp1a R171L 8.16e-1 BA.1.15
V287 524G>T missense_variant ORF1ab_pp1a R175L 8.16e-1 BA.1.15
V2880 16880G>T missense_variant ORF1ab_pp1ab R5627L 8.16e-1 BA.1.15
V2884 16909G>T missense_variant ORF1ab_pp1ab A5637S 8.16e-1 BA.1.15
V289 535G>T stop_gained ORF1ab_pp1a G179* 8.16e-1 BA.1.15
V2894 16982G>T missense_variant ORF1ab_pp1ab R5661L 8.16e-1 BA.1.15
V2896 16988G>T missense_variant ORF1ab_pp1ab R5663L 8.16e-1 BA.1.15
V29 -142G>T upstream_gene_variant ORF1ab_pp1a None 6.67e-1 BA.1.15
V2919 17173G>T missense_variant ORF1ab_pp1ab D5725Y 8.16e-1 BA.1.15
V2923 17198G>T missense_variant ORF1ab_pp1ab R5733L 8.16e-1 BA.1.15
V2933 17287G>T stop_gained ORF1ab_pp1ab G5763* 6.67e-1 BA.1.15
V2935 17297G>T missense_variant ORF1ab_pp1ab R5766L 6.67e-1 BA.1.15
V2936 17300G>T missense_variant ORF1ab_pp1ab R5767L 6.67e-1 BA.1.15
V2956 17455G>T missense_variant ORF1ab_pp1ab V5819L 8.16e-1 BA.1.15
V296 551G>T missense_variant ORF1ab_pp1a R184L 8.16e-1 BA.1.15
V2960 17477G>T missense_variant ORF1ab_pp1ab R5826L 8.16e-1 BA.1.15
V297 559G>T missense_variant ORF1ab_pp1a D187Y 8.16e-1 BA.1.15
V2992 17753G>T missense_variant ORF1ab_pp1ab R5918L 6.67e-1 BA.1.15
V3039 18002G>T missense_variant ORF1ab_pp1ab R6001L 6.67e-1 BA.1.15
V3040 18004G>T stop_gained ORF1ab_pp1ab E6002* 8.16e-1 BA.1.15
V3045 18026G>T missense_variant ORF1ab_pp1ab R6009L 8.16e-1 BA.1.15
V3048 18043G>T missense_variant ORF1ab_pp1ab D6015Y 8.16e-1 BA.1.15
V3049 18049G>T stop_gained ORF1ab_pp1ab E6017* 8.16e-1 BA.1.15
V3085 18263G>T missense_variant ORF1ab_pp1ab R6088L 8.16e-1 BA.1.15
V3102 18389G>T missense_variant ORF1ab_pp1ab R6130L 8.16e-1 BA.1.15
V3105 18413G>T missense_variant ORF1ab_pp1ab R6138L 8.16e-1 BA.1.15
V3130 18625G>T stop_gained ORF1ab_pp1ab E6209* 8.16e-1 BA.1.15
V3135 18641G>T missense_variant ORF1ab_pp1ab R6214L 8.16e-1 BA.1.15
V3187 18943G>T missense_variant ORF1ab_pp1ab D6315Y 8.16e-1 BA.1.15
V3216 19202G>T missense_variant ORF1ab_pp1ab R6401L 8.16e-1 BA.1.15
V3254 19538G>T missense_variant ORF1ab_pp1ab R6513L 6.67e-1 BA.1.15
V3293 19769G>T missense_variant ORF1ab_pp1ab R6590L 8.16e-1 BA.1.15
V332 695G>T missense_variant ORF1ab_pp1a R232L 8.16e-1 BA.1.15
V3331 20027G>T missense_variant ORF1ab_pp1ab R6676L 8.16e-1 BA.1.15
V3334 20053G>T stop_gained ORF1ab_pp1ab E6685* 8.16e-1 BA.1.15
V3338 20062G>T missense_variant ORF1ab_pp1ab V6688F 6.67e-1 BA.1.15
V3345 20126G>T missense_variant ORF1ab_pp1ab R6709L 8.16e-1 BA.1.15
V336 731G>T missense_variant ORF1ab_pp1a R244L 8.16e-1 BA.1.15
V3428 20683G>T missense_variant ORF1ab_pp1ab D6895Y 6.67e-1 BA.1.15
V3444 20791G>T missense_variant ORF1ab_pp1ab D6931Y 6.67e-1 BA.1.15
V3462 20893G>T missense_variant ORF1ab_pp1ab V6965L 6.67e-1 BA.1.15
V3487 21041G>T missense_variant ORF1ab_pp1ab R7014L 8.16e-1 BA.1.15
V3488 21043G>T stop_gained ORF1ab_pp1ab E7015* 8.16e-1 BA.1.15
V3517 -5G>T upstream_gene_variant S None 8.16e-1 BA.1.15
V3562 101G>T missense_variant S R34L 8.16e-1 BA.1.15
V3621 367G>T missense_variant S A123S 6.67e-1 BA.1.15
V38 -114G>T upstream_gene_variant ORF1ab_pp1a None 6.67e-1 BA.1.15
V3959 1730G>T missense_variant S R577L 8.16e-1 BA.1.15
V396 1003G>T missense_variant ORF1ab_pp1a D335Y 8.16e-1 BA.1.15
V3985 1901G>T missense_variant S R634L 8.16e-1 BA.1.15
V3991 1937G>T missense_variant S R646L 8.16e-1 BA.1.15
V4005 2014G>T missense_variant S A672S 8.16e-1 BA.1.15
V401 1024G>T stop_gained ORF1ab_pp1a E342* 8.16e-1 BA.1.15
V4029 2054G>T missense_variant S R685L 6.67e-1 BA.1.15
V41 -101G>T upstream_gene_variant ORF1ab_pp1a None 8.16e-1 BA.1.15
V4150 2948G>T missense_variant S R983L 8.16e-1 BA.1.15
V4302 -6G>T upstream_gene_variant ORF3a None 8.16e-1 BA.1.15
V437 1156G>T stop_gained ORF1ab_pp1a E386* 8.16e-1 BA.1.15
V4379 130G>T stop_gained ORF3a G44* 6.67e-1 BA.1.15
V4391 148G>T missense_variant ORF3a V50F 8.16e-1 BA.1.15
V4410 175G>T missense_variant ORF3a A59S 8.16e-1 BA.1.15
V446 1193G>T missense_variant ORF1ab_pp1a R398L 8.16e-1 BA.1.15
V453 1205G>T missense_variant ORF1ab_pp1a R402L 8.16e-1 BA.1.15
V4614 751G>T missense_variant ORF3a G251C 8.16e-1 BA.1.15
V4722 16G>T missense_variant M G6C 6.67e-1 BA.1.15
V4772 320G>T missense_variant M R107L 6.67e-1 BA.1.15
V484 1330G>T stop_gained ORF1ab_pp1a E444* 8.16e-1 BA.1.15
V4937 220G>T missense_variant ORF7a V74F 8.16e-1 BA.1.15
V511 1420G>T missense_variant ORF1ab_pp1a A474S 8.16e-1 BA.1.15
V5209 340G>T missense_variant ORF8 V114F 6.67e-1 BA.1.15
V5212 344G>T missense_variant ORF8 R115L 6.67e-1 BA.1.15
V5234 -12G>T upstream_gene_variant N None 8.16e-1 BA.1.15
V5266 29G>T missense_variant N R10L 8.16e-1 BA.1.15
V5277 41G>T missense_variant N R14L 8.16e-1 BA.1.15
V5349 214G>T missense_variant N V72F 6.67e-1 BA.1.15
V5355 263G>T missense_variant N R88L 8.16e-1 BA.1.15
V5359 278G>T missense_variant N R93L 6.67e-1 BA.1.15
V5364 295G>T missense_variant N G99C 6.67e-1 BA.1.15
V5395 446G>T missense_variant N R149L 8.16e-1 BA.1.15
V5404 472G>T missense_variant N V158L 6.67e-1 BA.1.15
V5414 517G>T missense_variant N A173S 6.67e-1 BA.1.15
V5429 554G>T missense_variant N R185L 8.16e-1 BA.1.15
V5434 566G>T missense_variant N R189L 6.67e-1 BA.1.15
V5437 572G>T missense_variant N R191L 6.67e-1 BA.1.15
V5536 776G>T missense_variant N R259L 8.16e-1 BA.1.15
V5537 785G>T missense_variant N R262L 8.16e-1 BA.1.15
V554 1625G>T missense_variant ORF1ab_pp1a R542L 6.67e-1 BA.1.15
V5546 823G>T missense_variant N G275C 8.16e-1 BA.1.15
V5547 830G>T missense_variant N R277L 8.16e-1 BA.1.15
V556 1634G>T missense_variant ORF1ab_pp1a R545L 8.16e-1 BA.1.15
V5566 946G>T stop_gained N G316* 8.16e-1 BA.1.15
V5570 956G>T missense_variant N R319L 8.16e-1 BA.1.15
V563 1649G>T missense_variant ORF1ab_pp1a R550L 8.16e-1 BA.1.15
V5690 22G>T missense_variant ORF10 A8S 8.16e-1 BA.1.15
V581 1696G>T missense_variant ORF1ab_pp1a A566S 8.16e-1 BA.1.15
V5970 726G>T synonymous_variant ORF1ab_pp1a T242T 6.67e-1 BA.1.15
V6010 999G>T synonymous_variant ORF1ab_pp1a T333T 6.67e-1 BA.1.15
V61 -68G>T upstream_gene_variant ORF1ab_pp1a None 6.67e-1 BA.1.15
V6165 2133G>T synonymous_variant ORF1ab_pp1a T711T 8.16e-1 BA.1.15
V6686 6006G>T synonymous_variant ORF1ab_pp1a T2002T 6.67e-1 BA.1.15
V6704 6099G>T synonymous_variant ORF1ab_pp1a A2033A 6.67e-1 BA.1.15
V6908 7791G>T synonymous_variant ORF1ab_pp1a T2597T 8.16e-1 BA.1.15
V747 2359G>T missense_variant ORF1ab_pp1a G787W 8.16e-1 BA.1.15
V752 2374G>T stop_gained ORF1ab_pp1a E792* 8.16e-1 BA.1.15
V7567 12975G>T synonymous_variant ORF1ab_pp1a S4325S 8.16e-1 BA.1.15
V762 2452G>T missense_variant ORF1ab_pp1a G818C 8.16e-1 BA.1.15
V7751 14358G>T synonymous_variant ORF1ab_pp1ab T4786T 8.16e-1 BA.1.15
V787 2614G>T missense_variant ORF1ab_pp1a A872S 8.16e-1 BA.1.15
V8328 18696G>T synonymous_variant ORF1ab_pp1ab A6232A 6.67e-1 BA.1.15
V8388 19191G>T synonymous_variant ORF1ab_pp1ab T6397T 8.16e-1 BA.1.15
V8502 20205G>T synonymous_variant ORF1ab_pp1ab A6735A 8.16e-1 BA.1.15
V8698 489G>T synonymous_variant S A163A 6.67e-1 BA.1.15
V9003 2883G>T synonymous_variant S T961T 6.67e-1 BA.1.15
V9253 801G>T synonymous_variant ORF3a P267P 8.16e-1 BA.1.15
V9753 939G>T synonymous_variant N A313A 6.67e-1 BA.1.15
V978 3319G>T stop_gained ORF1ab_pp1a G1107* 8.16e-1 BA.1.15
V1002 3424G>T stop_gained ORF1ab_pp1a E1142* 1.00e+0 BA.1.17.2
V1026 3509G>T missense_variant ORF1ab_pp1a R1170L 1.00e+0 BA.1.17.2
V103 -20G>T upstream_gene_variant ORF1ab_pp1a None 8.45e-1 BA.1.17.2
V1047 3610G>T missense_variant ORF1ab_pp1a A1204S 7.45e-1 BA.1.17.2
V11 -194G>T upstream_gene_variant ORF1ab_pp1a None 7.75e-1 BA.1.17.2
V111 -10G>T upstream_gene_variant ORF1ab_pp1a None 7.07e-1 BA.1.17.2
V1133 4127G>T missense_variant ORF1ab_pp1a R1376L 8.45e-1 BA.1.17.2
V1139 4157G>T missense_variant ORF1ab_pp1a R1386L 1.00e+0 BA.1.17.2
V1146 4211G>T missense_variant ORF1ab_pp1a R1404L 1.00e+0 BA.1.17.2
V1159 4318G>T missense_variant ORF1ab_pp1a D1440Y 1.00e+0 BA.1.17.2
V1164 4391G>T missense_variant ORF1ab_pp1a R1464L 1.00e+0 BA.1.17.2
V118 28G>T stop_gained ORF1ab_pp1a E10* 1.00e+0 BA.1.17.2
V120 40G>T missense_variant ORF1ab_pp1a V14F 1.00e+0 BA.1.17.2
V124 71G>T missense_variant ORF1ab_pp1a R24L 9.13e-1 BA.1.17.2
V125 73G>T missense_variant ORF1ab_pp1a D25Y 1.00e+0 BA.1.17.2
V1252 4883G>T missense_variant ORF1ab_pp1a R1628L 8.45e-1 BA.1.17.2
V126 76G>T missense_variant ORF1ab_pp1a V26L 8.45e-1 BA.1.17.2
V1298 5248G>T missense_variant ORF1ab_pp1a V1750L 8.45e-1 BA.1.17.2
V130 82G>T missense_variant ORF1ab_pp1a V28L 1.00e+0 BA.1.17.2
V132 86G>T missense_variant ORF1ab_pp1a R29L 1.00e+0 BA.1.17.2
V1345 5548G>T missense_variant ORF1ab_pp1a G1850C 9.13e-1 BA.1.17.2
V1374 5767G>T missense_variant ORF1ab_pp1a A1923S 9.13e-1 BA.1.17.2
V139 103G>T missense_variant ORF1ab_pp1a V35L 9.13e-1 BA.1.17.2
V1409 6032G>T missense_variant ORF1ab_pp1a R2011L 1.00e+0 BA.1.17.2
V1432 6097G>T missense_variant ORF1ab_pp1a A2033S 1.00e+0 BA.1.17.2
V1439 6124G>T stop_gained ORF1ab_pp1a E2042* 9.13e-1 BA.1.17.2
V1458 6181G>T missense_variant ORF1ab_pp1a V2061F 6.74e-1 BA.1.17.2
V146 128G>T missense_variant ORF1ab_pp1a R43L 9.13e-1 BA.1.17.2
V1464 6208G>T stop_gained ORF1ab_pp1a E2070* 1.00e+0 BA.1.17.2
V1544 6476G>T missense_variant ORF1ab_pp1a R2159L 1.00e+0 BA.1.17.2
V1546 6488G>T missense_variant ORF1ab_pp1a R2163L 9.13e-1 BA.1.17.2
V1565 6619G>T missense_variant ORF1ab_pp1a G2207C 7.07e-1 BA.1.17.2
V1578 6742G>T missense_variant ORF1ab_pp1a A2248S 9.13e-1 BA.1.17.2
V162 178G>T missense_variant ORF1ab_pp1a V60F 7.91e-1 BA.1.17.2
V1644 7207G>T missense_variant ORF1ab_pp1a G2403C 1.00e+0 BA.1.17.2
V1649 7244G>T missense_variant ORF1ab_pp1a R2415L 1.00e+0 BA.1.17.2
V1651 7264G>T stop_gained ORF1ab_pp1a E2422* 1.00e+0 BA.1.17.2
V1662 7471G>T missense_variant ORF1ab_pp1a V2491F 1.00e+0 BA.1.17.2
V168 218G>T missense_variant ORF1ab_pp1a R73L 9.13e-1 BA.1.17.2
V1712 7783G>T missense_variant ORF1ab_pp1a V2595F 9.13e-1 BA.1.17.2
V1716 7810G>T missense_variant ORF1ab_pp1a V2604L 7.91e-1 BA.1.17.2
V1743 7913G>T missense_variant ORF1ab_pp1a R2638L 1.00e+0 BA.1.17.2
V175 230G>T missense_variant ORF1ab_pp1a R77L 6.74e-1 BA.1.17.2
V1753 8002G>T missense_variant ORF1ab_pp1a D2668Y 1.00e+0 BA.1.17.2
V1760 8057G>T missense_variant ORF1ab_pp1a R2686L 1.00e+0 BA.1.17.2
V1766 8090G>T missense_variant ORF1ab_pp1a R2697L 1.00e+0 BA.1.17.2
V1774 8143G>T missense_variant ORF1ab_pp1a V2715F 1.00e+0 BA.1.17.2
V1777 8177G>T missense_variant ORF1ab_pp1a R2726L 1.00e+0 BA.1.17.2
V1778 8189G>T missense_variant ORF1ab_pp1a R2730L 1.00e+0 BA.1.17.2
V1819 8453G>T missense_variant ORF1ab_pp1a R2818L 9.13e-1 BA.1.17.2
V1829 8522G>T missense_variant ORF1ab_pp1a R2841L 1.00e+0 BA.1.17.2
V1846 8596G>T missense_variant ORF1ab_pp1a V2866L 1.00e+0 BA.1.17.2
V1857 8624G>T missense_variant ORF1ab_pp1a R2875L 1.00e+0 BA.1.17.2
V1883 8846G>T missense_variant ORF1ab_pp1a R2949L 1.00e+0 BA.1.17.2
V1886 8858G>T missense_variant ORF1ab_pp1a R2953L 1.00e+0 BA.1.17.2
V1900 8959G>T missense_variant ORF1ab_pp1a G2987C 1.00e+0 BA.1.17.2
V1961 9491G>T missense_variant ORF1ab_pp1a R3164L 1.00e+0 BA.1.17.2
V1964 9581G>T missense_variant ORF1ab_pp1a R3194L 1.00e+0 BA.1.17.2
V1979 9703G>T missense_variant ORF1ab_pp1a A3235S 7.91e-1 BA.1.17.2
V1993 9874G>T missense_variant ORF1ab_pp1a G3292C 1.00e+0 BA.1.17.2
V1997 9892G>T missense_variant ORF1ab_pp1a V3298L 9.13e-1 BA.1.17.2
V2005 9968G>T missense_variant ORF1ab_pp1a R3323L 1.00e+0 BA.1.17.2
V2030 10103G>T missense_variant ORF1ab_pp1a R3368L 1.00e+0 BA.1.17.2
V2055 10417G>T missense_variant ORF1ab_pp1a A3473S 1.00e+0 BA.1.17.2
V2060 10454G>T missense_variant ORF1ab_pp1a R3485L 1.00e+0 BA.1.17.2
V207 277G>T stop_gained ORF1ab_pp1a E93* 1.00e+0 BA.1.17.2
V2079 10570G>T missense_variant ORF1ab_pp1a V3524F 9.13e-1 BA.1.17.2
V2087 10625G>T missense_variant ORF1ab_pp1a R3542L 1.00e+0 BA.1.17.2
V21 -165G>T upstream_gene_variant ORF1ab_pp1a None 8.00e-1 BA.1.17.2
V212 292G>T missense_variant ORF1ab_pp1a G98C 8.45e-1 BA.1.17.2
V215 296G>T missense_variant ORF1ab_pp1a R99L 1.00e+0 BA.1.17.2
V2151 10985G>T missense_variant ORF1ab_pp1a R3662L 8.94e-1 BA.1.17.2
V2238 11405G>T missense_variant ORF1ab_pp1a R3802L 7.45e-1 BA.1.17.2
V228 337G>T stop_gained ORF1ab_pp1a E113* 1.00e+0 BA.1.17.2
V2310 11978G>T missense_variant ORF1ab_pp1a R3993L 7.91e-1 BA.1.17.2
V2313 11996G>T missense_variant ORF1ab_pp1a R3999L 1.00e+0 BA.1.17.2
V2358 12449G>T missense_variant ORF1ab_pp1a R4150L 1.00e+0 BA.1.17.2
V2362 12469G>T missense_variant ORF1ab_pp1a G4157C 1.00e+0 BA.1.17.2
V2386 12559G>T missense_variant ORF1ab_pp1a D4187Y 1.00e+0 BA.1.17.2
V239 356G>T missense_variant ORF1ab_pp1a R119L 1.00e+0 BA.1.17.2
V2406 12752G>T missense_variant ORF1ab_pp1a R4251L 1.00e+0 BA.1.17.2
V2424 12992G>T missense_variant ORF1ab_pp1a R4331L 8.45e-1 BA.1.17.2
V243 371G>T missense_variant ORF1ab_pp1a R124L 9.13e-1 BA.1.17.2
V2438 13114G>T missense_variant ORF1ab_pp1a V4372F 1.00e+0 BA.1.17.2
V2445 13160G>T missense_variant ORF1ab_pp1a R4387L 1.00e+0 BA.1.17.2
V2446 13162G>T stop_gained ORF1ab_pp1a E4388* 1.00e+0 BA.1.17.2
V245 379G>T missense_variant ORF1ab_pp1a G127C 7.45e-1 BA.1.17.2
V2452 13204G>T missense_variant ORF1ab_pp1a G4402W 1.00e+0 BA.1.17.2
V2453 13213G>T missense_variant ORF1ab_pp1ab G4405C 1.00e+0 BA.1.17.2
V2456 13229G>T missense_variant ORF1ab_pp1ab R4410L 1.00e+0 BA.1.17.2
V2459 13243G>T missense_variant ORF1ab_pp1ab G4415C 1.00e+0 BA.1.17.2
V2463 13267G>T missense_variant ORF1ab_pp1ab V4423L 1.00e+0 BA.1.17.2
V2470 13340G>T missense_variant ORF1ab_pp1ab R4447L 1.00e+0 BA.1.17.2
V2474 13357G>T stop_gained ORF1ab_pp1ab E4453* 1.00e+0 BA.1.17.2
V2496 13498G>T missense_variant ORF1ab_pp1ab G4500C 9.13e-1 BA.1.17.2
V2500 13523G>T missense_variant ORF1ab_pp1ab R4508L 1.00e+0 BA.1.17.2
V2503 13529G>T missense_variant ORF1ab_pp1ab R4510L 1.00e+0 BA.1.17.2
V2507 13558G>T missense_variant ORF1ab_pp1ab V4520F 1.00e+0 BA.1.17.2
V251 409G>T missense_variant ORF1ab_pp1a G137C 9.13e-1 BA.1.17.2
V2528 13694G>T missense_variant ORF1ab_pp1ab R4565L 1.00e+0 BA.1.17.2
V2529 13696G>T missense_variant ORF1ab_pp1ab V4566L 1.00e+0 BA.1.17.2
V2532 13702G>T missense_variant ORF1ab_pp1ab A4568S 9.13e-1 BA.1.17.2
V2534 13718G>T missense_variant ORF1ab_pp1ab R4573L 1.00e+0 BA.1.17.2
V2535 13724G>T missense_variant ORF1ab_pp1ab R4575L 1.00e+0 BA.1.17.2
V2540 13766G>T missense_variant ORF1ab_pp1ab R4589L 9.13e-1 BA.1.17.2
V2543 13834G>T missense_variant ORF1ab_pp1ab G4612C 1.00e+0 BA.1.17.2
V255 412G>T missense_variant ORF1ab_pp1a A138S 1.00e+0 BA.1.17.2
V257 415G>T missense_variant ORF1ab_pp1a D139Y 7.45e-1 BA.1.17.2
V2584 14030G>T missense_variant ORF1ab_pp1ab R4677L 1.00e+0 BA.1.17.2
V2612 14320G>T missense_variant ORF1ab_pp1ab A4774S 1.00e+0 BA.1.17.2
V2615 14351G>T missense_variant ORF1ab_pp1ab R4784L 1.00e+0 BA.1.17.2
V2620 14413G>T missense_variant ORF1ab_pp1ab G4805C 1.00e+0 BA.1.17.2
V2631 14530G>T missense_variant ORF1ab_pp1ab D4844Y 1.00e+0 BA.1.17.2
V2632 14546G>T missense_variant ORF1ab_pp1ab R4849L 1.00e+0 BA.1.17.2
V2641 14659G>T missense_variant ORF1ab_pp1ab V4887F 1.00e+0 BA.1.17.2
V2652 14761G>T missense_variant ORF1ab_pp1ab A4921S 9.13e-1 BA.1.17.2
V2654 14774G>T missense_variant ORF1ab_pp1ab R4925L 1.00e+0 BA.1.17.2
V2656 14840G>T missense_variant ORF1ab_pp1ab R4947L 1.00e+0 BA.1.17.2
V2657 14845G>T missense_variant ORF1ab_pp1ab V4949L 1.00e+0 BA.1.17.2
V2660 14917G>T missense_variant ORF1ab_pp1ab A4973S 1.00e+0 BA.1.17.2
V2680 15095G>T missense_variant ORF1ab_pp1ab R5032L 1.00e+0 BA.1.17.2
V2687 15128G>T missense_variant ORF1ab_pp1ab R5043L 1.00e+0 BA.1.17.2
V269 439G>T missense_variant ORF1ab_pp1a D147Y 7.45e-1 BA.1.17.2
V270 442G>T stop_gained ORF1ab_pp1a E148* 1.00e+0 BA.1.17.2
V2702 15325G>T missense_variant ORF1ab_pp1ab D5109Y 1.00e+0 BA.1.17.2
V2706 15338G>T missense_variant ORF1ab_pp1ab R5113L 1.00e+0 BA.1.17.2
V2715 15415G>T missense_variant ORF1ab_pp1ab A5139S 1.00e+0 BA.1.17.2
V2716 15425G>T missense_variant ORF1ab_pp1ab R5142L 1.00e+0 BA.1.17.2
V2719 15457G>T missense_variant ORF1ab_pp1ab D5153Y 1.00e+0 BA.1.17.2
V2743 15697G>T missense_variant ORF1ab_pp1ab G5233C 1.00e+0 BA.1.17.2
V2746 15749G>T missense_variant ORF1ab_pp1ab R5250L 1.00e+0 BA.1.17.2
V2747 15754G>T missense_variant ORF1ab_pp1ab V5252L 1.00e+0 BA.1.17.2
V2772 16034G>T missense_variant ORF1ab_pp1ab R5345L 1.00e+0 BA.1.17.2
V2796 16273G>T missense_variant ORF1ab_pp1ab D5425Y 1.00e+0 BA.1.17.2
V2812 16436G>T missense_variant ORF1ab_pp1ab R5479L 1.00e+0 BA.1.17.2
V2822 16505G>T missense_variant ORF1ab_pp1ab R5502L 1.00e+0 BA.1.17.2
V2823 16529G>T missense_variant ORF1ab_pp1ab R5510L 1.00e+0 BA.1.17.2
V2834 16607G>T missense_variant ORF1ab_pp1ab R5536L 9.13e-1 BA.1.17.2
V285 512G>T missense_variant ORF1ab_pp1a R171L 1.00e+0 BA.1.17.2
V287 524G>T missense_variant ORF1ab_pp1a R175L 6.74e-1 BA.1.17.2
V2880 16880G>T missense_variant ORF1ab_pp1ab R5627L 9.13e-1 BA.1.17.2
V2884 16909G>T missense_variant ORF1ab_pp1ab A5637S 1.00e+0 BA.1.17.2
V289 535G>T stop_gained ORF1ab_pp1a G179* 1.00e+0 BA.1.17.2
V2894 16982G>T missense_variant ORF1ab_pp1ab R5661L 1.00e+0 BA.1.17.2
V2896 16988G>T missense_variant ORF1ab_pp1ab R5663L 1.00e+0 BA.1.17.2
V29 -142G>T upstream_gene_variant ORF1ab_pp1a None 9.13e-1 BA.1.17.2
V2919 17173G>T missense_variant ORF1ab_pp1ab D5725Y 1.00e+0 BA.1.17.2
V2923 17198G>T missense_variant ORF1ab_pp1ab R5733L 1.00e+0 BA.1.17.2
V2933 17287G>T stop_gained ORF1ab_pp1ab G5763* 1.00e+0 BA.1.17.2
V2935 17297G>T missense_variant ORF1ab_pp1ab R5766L 1.00e+0 BA.1.17.2
V2936 17300G>T missense_variant ORF1ab_pp1ab R5767L 1.00e+0 BA.1.17.2
V2956 17455G>T missense_variant ORF1ab_pp1ab V5819L 1.00e+0 BA.1.17.2
V296 551G>T missense_variant ORF1ab_pp1a R184L 1.00e+0 BA.1.17.2
V2960 17477G>T missense_variant ORF1ab_pp1ab R5826L 1.00e+0 BA.1.17.2
V297 559G>T missense_variant ORF1ab_pp1a D187Y 1.00e+0 BA.1.17.2
V2992 17753G>T missense_variant ORF1ab_pp1ab R5918L 1.00e+0 BA.1.17.2
V3016 17899A>T missense_variant ORF1ab_pp1ab I5967L 6.74e-1 BA.1.17.2
V3039 18002G>T missense_variant ORF1ab_pp1ab R6001L 8.45e-1 BA.1.17.2
V3040 18004G>T stop_gained ORF1ab_pp1ab E6002* 1.00e+0 BA.1.17.2
V3045 18026G>T missense_variant ORF1ab_pp1ab R6009L 9.13e-1 BA.1.17.2
V3048 18043G>T missense_variant ORF1ab_pp1ab D6015Y 1.00e+0 BA.1.17.2
V3049 18049G>T stop_gained ORF1ab_pp1ab E6017* 1.00e+0 BA.1.17.2
V3085 18263G>T missense_variant ORF1ab_pp1ab R6088L 1.00e+0 BA.1.17.2
V3092 18319G>T missense_variant ORF1ab_pp1ab V6107L 9.13e-1 BA.1.17.2
V3102 18389G>T missense_variant ORF1ab_pp1ab R6130L 1.00e+0 BA.1.17.2
V3105 18413G>T missense_variant ORF1ab_pp1ab R6138L 9.13e-1 BA.1.17.2
V311 620G>T missense_variant ORF1ab_pp1a R207L 9.13e-1 BA.1.17.2
V3115 18481G>T missense_variant ORF1ab_pp1ab V6161F 6.45e-1 BA.1.17.2
V3130 18625G>T stop_gained ORF1ab_pp1ab E6209* 1.00e+0 BA.1.17.2
V3135 18641G>T missense_variant ORF1ab_pp1ab R6214L 8.45e-1 BA.1.17.2
V3187 18943G>T missense_variant ORF1ab_pp1ab D6315Y 9.13e-1 BA.1.17.2
V321 649G>T stop_gained ORF1ab_pp1a E217* 1.00e+0 BA.1.17.2
V3216 19202G>T missense_variant ORF1ab_pp1ab R6401L 1.00e+0 BA.1.17.2
V3254 19538G>T missense_variant ORF1ab_pp1ab R6513L 1.00e+0 BA.1.17.2
V3293 19769G>T missense_variant ORF1ab_pp1ab R6590L 1.00e+0 BA.1.17.2
V3310 19870G>T missense_variant ORF1ab_pp1ab V6624L 6.74e-1 BA.1.17.2
V332 695G>T missense_variant ORF1ab_pp1a R232L 1.00e+0 BA.1.17.2
V3331 20027G>T missense_variant ORF1ab_pp1ab R6676L 1.00e+0 BA.1.17.2
V3334 20053G>T stop_gained ORF1ab_pp1ab E6685* 1.00e+0 BA.1.17.2
V3338 20062G>T missense_variant ORF1ab_pp1ab V6688F 1.00e+0 BA.1.17.2
V3345 20126G>T missense_variant ORF1ab_pp1ab R6709L 1.00e+0 BA.1.17.2
V336 731G>T missense_variant ORF1ab_pp1a R244L 1.00e+0 BA.1.17.2
V3415 20527G>T missense_variant ORF1ab_pp1ab A6843S 1.00e+0 BA.1.17.2
V3428 20683G>T missense_variant ORF1ab_pp1ab D6895Y 1.00e+0 BA.1.17.2
V3444 20791G>T missense_variant ORF1ab_pp1ab D6931Y 1.00e+0 BA.1.17.2
V3462 20893G>T missense_variant ORF1ab_pp1ab V6965L 1.00e+0 BA.1.17.2
V3475 20956G>T missense_variant ORF1ab_pp1ab A6986S 7.91e-1 BA.1.17.2
V3487 21041G>T missense_variant ORF1ab_pp1ab R7014L 9.13e-1 BA.1.17.2
V3488 21043G>T stop_gained ORF1ab_pp1ab E7015* 1.00e+0 BA.1.17.2
V3517 -5G>T upstream_gene_variant S None 1.00e+0 BA.1.17.2
V3562 101G>T missense_variant S R34L 1.00e+0 BA.1.17.2
V3621 367G>T missense_variant S A123S 1.00e+0 BA.1.17.2
V370 902G>T missense_variant ORF1ab_pp1a R301L 9.13e-1 BA.1.17.2
V3737 641G>T missense_variant S R214L 1.00e+0 BA.1.17.2
V38 -114G>T upstream_gene_variant ORF1ab_pp1a None 1.00e+0 BA.1.17.2
V3822 1030G>T missense_variant S A344S 9.13e-1 BA.1.17.2
V3923 1478A>T missense_variant S Q493L 6.76e-1 BA.1.17.2
V3959 1730G>T missense_variant S R577L 1.00e+0 BA.1.17.2
V396 1003G>T missense_variant ORF1ab_pp1a D335Y 1.00e+0 BA.1.17.2
V3985 1901G>T missense_variant S R634L 1.00e+0 BA.1.17.2
V3991 1937G>T missense_variant S R646L 8.45e-1 BA.1.17.2
V4005 2014G>T missense_variant S A672S 1.00e+0 BA.1.17.2
V401 1024G>T stop_gained ORF1ab_pp1a E342* 1.00e+0 BA.1.17.2
V4025 2045G>T missense_variant S R682L 1.00e+0 BA.1.17.2
V4026 2048G>T missense_variant S R683L 7.07e-1 BA.1.17.2
V4029 2054G>T missense_variant S R685L 8.45e-1 BA.1.17.2
V41 -101G>T upstream_gene_variant ORF1ab_pp1a None 7.91e-1 BA.1.17.2
V4150 2948G>T missense_variant S R983L 1.00e+0 BA.1.17.2
V4185 3272G>T missense_variant S R1091L 8.45e-1 BA.1.17.2
V4235 3554G>T missense_variant S R1185L 1.00e+0 BA.1.17.2
V4244 3595G>T missense_variant S D1199Y 6.45e-1 BA.1.17.2
V4302 -6G>T upstream_gene_variant ORF3a None 1.00e+0 BA.1.17.2
V4345 89G>T missense_variant ORF3a R30L 9.13e-1 BA.1.17.2
V4347 91G>T missense_variant ORF3a A31S 8.45e-1 BA.1.17.2
V437 1156G>T stop_gained ORF1ab_pp1a E386* 1.00e+0 BA.1.17.2
V4379 130G>T stop_gained ORF3a G44* 1.00e+0 BA.1.17.2
V4391 148G>T missense_variant ORF3a V50F 6.74e-1 BA.1.17.2
V4410 175G>T missense_variant ORF3a A59S 8.45e-1 BA.1.17.2
V4459 289G>T missense_variant ORF3a V97F 6.45e-1 BA.1.17.2
V446 1193G>T missense_variant ORF1ab_pp1a R398L 1.00e+0 BA.1.17.2
V453 1205G>T missense_variant ORF1ab_pp1a R402L 1.00e+0 BA.1.17.2
V4614 751G>T missense_variant ORF3a G251C 7.91e-1 BA.1.17.2
V4652 817G>T missense_variant ORF3a V273L 8.45e-1 BA.1.17.2
V4672 70G>T missense_variant E V24L 7.45e-1 BA.1.17.2
V4678 145G>T missense_variant E V49L 1.00e+0 BA.1.17.2
V4685 172G>T missense_variant E V58F 7.91e-1 BA.1.17.2
V469 1285G>T missense_variant ORF1ab_pp1a A429S 9.13e-1 BA.1.17.2
V4757 232G>T missense_variant M G78C 6.20e-1 BA.1.17.2
V4763 247G>T missense_variant M A83S 9.13e-1 BA.1.17.2
V4772 320G>T missense_variant M R107L 9.13e-1 BA.1.17.2
V4800 13G>T missense_variant ORF6 V5F 6.76e-1 BA.1.17.2
V4812 59G>T missense_variant ORF6 R20M 6.74e-1 BA.1.17.2
V484 1330G>T stop_gained ORF1ab_pp1a E444* 1.00e+0 BA.1.17.2
V4864 37G>T missense_variant ORF7a A13S 9.13e-1 BA.1.17.2
V4895 121G>T stop_gained ORF7a E41* 9.13e-1 BA.1.17.2
V4932 211G>T missense_variant ORF7a V71L 6.74e-1 BA.1.17.2
V4937 220G>T missense_variant ORF7a V74F 9.13e-1 BA.1.17.2
V4943 233G>T missense_variant ORF7a R78L 1.00e+0 BA.1.17.2
V5061 -4G>T upstream_gene_variant ORF8 None 7.30e-1 BA.1.17.2
V511 1420G>T missense_variant ORF1ab_pp1a A474S 1.00e+0 BA.1.17.2
V5173 223G>T missense_variant ORF8 D75Y 6.76e-1 BA.1.17.2
V5176 229G>T missense_variant ORF8 G77C 8.94e-1 BA.1.17.2
V5196 302G>T missense_variant ORF8 R101L 1.00e+0 BA.1.17.2
V5209 340G>T missense_variant ORF8 V114F 1.00e+0 BA.1.17.2
V5212 344G>T missense_variant ORF8 R115L 7.91e-1 BA.1.17.2
V5234 -12G>T upstream_gene_variant N None 1.00e+0 BA.1.17.2
V5266 29G>T missense_variant N R10L 8.45e-1 BA.1.17.2
V5277 41G>T missense_variant N R14L 1.00e+0 BA.1.17.2
V5324 107G>T missense_variant N R36L 7.91e-1 BA.1.17.2
V5331 119G>T missense_variant N R40L 8.45e-1 BA.1.17.2
V5333 122G>T missense_variant N R41L 7.07e-1 BA.1.17.2
V5337 163G>T missense_variant N A55S 7.07e-1 BA.1.17.2
V5345 203G>T missense_variant N R68L 7.91e-1 BA.1.17.2
V5349 214G>T missense_variant N V72F 1.00e+0 BA.1.17.2
V5355 263G>T missense_variant N R88L 8.45e-1 BA.1.17.2
V5359 278G>T missense_variant N R93L 9.13e-1 BA.1.17.2
V5361 284G>T missense_variant N R95L 1.00e+0 BA.1.17.2
V5364 295G>T missense_variant N G99C 1.00e+0 BA.1.17.2
V5379 385G>T missense_variant N G129C 8.94e-1 BA.1.17.2
V5395 446G>T missense_variant N R149L 8.94e-1 BA.1.17.2
V5404 472G>T missense_variant N V158L 8.45e-1 BA.1.17.2
V5414 517G>T missense_variant N A173S 1.00e+0 BA.1.17.2
V5419 535G>T missense_variant N G179C 7.45e-1 BA.1.17.2
V5429 554G>T missense_variant N R185L 9.13e-1 BA.1.17.2
V5434 566G>T missense_variant N R189L 7.91e-1 BA.1.17.2
V5437 572G>T missense_variant N R191L 7.45e-1 BA.1.17.2
V5536 776G>T missense_variant N R259L 9.13e-1 BA.1.17.2
V5537 785G>T missense_variant N R262L 1.00e+0 BA.1.17.2
V554 1625G>T missense_variant ORF1ab_pp1a R542L 7.91e-1 BA.1.17.2
V5546 823G>T missense_variant N G275C 1.00e+0 BA.1.17.2
V5547 830G>T missense_variant N R277L 1.00e+0 BA.1.17.2
V556 1634G>T missense_variant ORF1ab_pp1a R545L 1.00e+0 BA.1.17.2
V5565 931G>T missense_variant N A311S 7.45e-1 BA.1.17.2
V5566 946G>T stop_gained N G316* 1.00e+0 BA.1.17.2
V5570 956G>T missense_variant N R319L 1.00e+0 BA.1.17.2
V563 1649G>T missense_variant ORF1ab_pp1a R550L 1.00e+0 BA.1.17.2
V5690 22G>T missense_variant ORF10 A8S 7.45e-1 BA.1.17.2
V574 1679G>T missense_variant ORF1ab_pp1a R560L 7.45e-1 BA.1.17.2
V581 1696G>T missense_variant ORF1ab_pp1a A566S 1.00e+0 BA.1.17.2
V5875 222G>T synonymous_variant ORF1ab_pp1a S74S 7.91e-1 BA.1.17.2
V5970 726G>T synonymous_variant ORF1ab_pp1a T242T 6.45e-1 BA.1.17.2
V5998 921G>T synonymous_variant ORF1ab_pp1a A307A 9.13e-1 BA.1.17.2
V61 -68G>T upstream_gene_variant ORF1ab_pp1a None 8.45e-1 BA.1.17.2
V6121 1830G>T synonymous_variant ORF1ab_pp1a S610S 1.00e+0 BA.1.17.2
V6165 2133G>T synonymous_variant ORF1ab_pp1a T711T 9.13e-1 BA.1.17.2
V657 1981G>T missense_variant ORF1ab_pp1a G661C 1.00e+0 BA.1.17.2
V6634 5592G>T synonymous_variant ORF1ab_pp1a T1864T 1.00e+0 BA.1.17.2
V6686 6006G>T synonymous_variant ORF1ab_pp1a T2002T 1.00e+0 BA.1.17.2
V6704 6099G>T synonymous_variant ORF1ab_pp1a A2033A 9.13e-1 BA.1.17.2
V6765 6585G>T synonymous_variant ORF1ab_pp1a P2195P 7.07e-1 BA.1.17.2
V69 -62G>T upstream_gene_variant ORF1ab_pp1a None 6.20e-1 BA.1.17.2
V6908 7791G>T synonymous_variant ORF1ab_pp1a T2597T 6.74e-1 BA.1.17.2
V6950 8088G>T synonymous_variant ORF1ab_pp1a A2696A 1.00e+0 BA.1.17.2
V6952 8103G>T synonymous_variant ORF1ab_pp1a A2701A 6.45e-1 BA.1.17.2
V7140 9606G>T synonymous_variant ORF1ab_pp1a T3202T 8.94e-1 BA.1.17.2
V72 -58G>T upstream_gene_variant ORF1ab_pp1a None 1.00e+0 BA.1.17.2
V747 2359G>T missense_variant ORF1ab_pp1a G787W 1.00e+0 BA.1.17.2
V752 2374G>T stop_gained ORF1ab_pp1a E792* 1.00e+0 BA.1.17.2
V7559 12936G>T synonymous_variant ORF1ab_pp1a P4312P 7.45e-1 BA.1.17.2
V7567 12975G>T synonymous_variant ORF1ab_pp1a S4325S 1.00e+0 BA.1.17.2
V7604 13239G>T synonymous_variant ORF1ab_pp1ab P4413P 1.00e+0 BA.1.17.2
V762 2452G>T missense_variant ORF1ab_pp1a G818C 1.00e+0 BA.1.17.2
V7677 13854G>T synonymous_variant ORF1ab_pp1ab T4618T 9.13e-1 BA.1.17.2
V7751 14358G>T synonymous_variant ORF1ab_pp1ab T4786T 8.45e-1 BA.1.17.2
V782 2593G>T missense_variant ORF1ab_pp1a G865C 9.13e-1 BA.1.17.2
V787 2614G>T missense_variant ORF1ab_pp1a A872S 9.13e-1 BA.1.17.2
V7951 15957G>T synonymous_variant ORF1ab_pp1ab P5319P 8.45e-1 BA.1.17.2
V7974 16113G>T synonymous_variant ORF1ab_pp1ab P5371P 6.45e-1 BA.1.17.2
V8011 16383G>T synonymous_variant ORF1ab_pp1ab T5461T 6.45e-1 BA.1.17.2
V8101 17070G>T synonymous_variant ORF1ab_pp1ab T5690T 6.20e-1 BA.1.17.2
V8252 18198G>T synonymous_variant ORF1ab_pp1ab P6066P 8.45e-1 BA.1.17.2
V8328 18696G>T synonymous_variant ORF1ab_pp1ab A6232A 8.45e-1 BA.1.17.2
V8388 19191G>T synonymous_variant ORF1ab_pp1ab T6397T 6.74e-1 BA.1.17.2
V8502 20205G>T synonymous_variant ORF1ab_pp1ab A6735A 1.00e+0 BA.1.17.2
V8519 20406G>T synonymous_variant ORF1ab_pp1ab A6802A 8.45e-1 BA.1.17.2
V8549 20673G>T synonymous_variant ORF1ab_pp1ab T6891T 9.13e-1 BA.1.17.2
V8678 336G>T synonymous_variant S S112S 7.91e-1 BA.1.17.2
V8698 489G>T synonymous_variant S A163A 7.45e-1 BA.1.17.2
V8711 624G>T synonymous_variant S T208T 8.45e-1 BA.1.17.2
V8973 2637G>T synonymous_variant S A879A 7.07e-1 BA.1.17.2
V9003 2883G>T synonymous_variant S T961T 1.00e+0 BA.1.17.2
V9154 108G>T synonymous_variant ORF3a P36P 6.45e-1 BA.1.17.2
V9253 801G>T synonymous_variant ORF3a P267P 9.13e-1 BA.1.17.2
V9256 807G>T synonymous_variant ORF3a T269T 9.13e-1 BA.1.17.2
V9262 18G>T synonymous_variant E S6S 6.20e-1 BA.1.17.2
V9274 108G>T synonymous_variant E A36A 1.00e+0 BA.1.17.2
V9330 312G>T synonymous_variant M A104A 6.45e-1 BA.1.17.2
V9480 315G>T synonymous_variant ORF7a A105A 7.45e-1 BA.1.17.2
V9550 309G>T synonymous_variant ORF8 S103S 8.45e-1 BA.1.17.2
V9753 939G>T synonymous_variant N A313A 7.45e-1 BA.1.17.2
V9758 954G>T synonymous_variant N S318S 6.45e-1 BA.1.17.2
V978 3319G>T stop_gained ORF1ab_pp1a G1107* 1.00e+0 BA.1.17.2
V9824 30G>T synonymous_variant ORF10 P10P 8.45e-1 BA.1.17.2
V9825 36G>T synonymous_variant ORF10 T12T 9.13e-1 BA.1.17.2
V1002 3424G>T stop_gained ORF1ab_pp1a E1142* 1.00e+0 BA.1.17
V1026 3509G>T missense_variant ORF1ab_pp1a R1170L 1.00e+0 BA.1.17
V103 -20G>T upstream_gene_variant ORF1ab_pp1a None 7.07e-1 BA.1.17
V1047 3610G>T missense_variant ORF1ab_pp1a A1204S 1.00e+0 BA.1.17
V11 -194G>T upstream_gene_variant ORF1ab_pp1a None 1.00e+0 BA.1.17
V111 -10G>T upstream_gene_variant ORF1ab_pp1a None 1.00e+0 BA.1.17
V1133 4127G>T missense_variant ORF1ab_pp1a R1376L 1.00e+0 BA.1.17
V1139 4157G>T missense_variant ORF1ab_pp1a R1386L 1.00e+0 BA.1.17
V1146 4211G>T missense_variant ORF1ab_pp1a R1404L 7.07e-1 BA.1.17
V1159 4318G>T missense_variant ORF1ab_pp1a D1440Y 1.00e+0 BA.1.17
V118 28G>T stop_gained ORF1ab_pp1a E10* 1.00e+0 BA.1.17
V120 40G>T missense_variant ORF1ab_pp1a V14F 1.00e+0 BA.1.17
V124 71G>T missense_variant ORF1ab_pp1a R24L 7.07e-1 BA.1.17
V125 73G>T missense_variant ORF1ab_pp1a D25Y 1.00e+0 BA.1.17
V126 76G>T missense_variant ORF1ab_pp1a V26L 1.00e+0 BA.1.17
V1298 5248G>T missense_variant ORF1ab_pp1a V1750L 1.00e+0 BA.1.17
V130 82G>T missense_variant ORF1ab_pp1a V28L 1.00e+0 BA.1.17
V132 86G>T missense_variant ORF1ab_pp1a R29L 1.00e+0 BA.1.17
V1345 5548G>T missense_variant ORF1ab_pp1a G1850C 1.00e+0 BA.1.17
V1374 5767G>T missense_variant ORF1ab_pp1a A1923S 1.00e+0 BA.1.17
V139 103G>T missense_variant ORF1ab_pp1a V35L 1.00e+0 BA.1.17
V1409 6032G>T missense_variant ORF1ab_pp1a R2011L 1.00e+0 BA.1.17
V1432 6097G>T missense_variant ORF1ab_pp1a A2033S 7.07e-1 BA.1.17
V1439 6124G>T stop_gained ORF1ab_pp1a E2042* 1.00e+0 BA.1.17
V1458 6181G>T missense_variant ORF1ab_pp1a V2061F 7.07e-1 BA.1.17
V146 128G>T missense_variant ORF1ab_pp1a R43L 7.07e-1 BA.1.17
V1464 6208G>T stop_gained ORF1ab_pp1a E2070* 1.00e+0 BA.1.17
V1544 6476G>T missense_variant ORF1ab_pp1a R2159L 1.00e+0 BA.1.17
V1546 6488G>T missense_variant ORF1ab_pp1a R2163L 1.00e+0 BA.1.17
V1565 6619G>T missense_variant ORF1ab_pp1a G2207C 1.00e+0 BA.1.17
V1578 6742G>T missense_variant ORF1ab_pp1a A2248S 1.00e+0 BA.1.17
V1644 7207G>T missense_variant ORF1ab_pp1a G2403C 1.00e+0 BA.1.17
V1649 7244G>T missense_variant ORF1ab_pp1a R2415L 1.00e+0 BA.1.17
V1651 7264G>T stop_gained ORF1ab_pp1a E2422* 1.00e+0 BA.1.17
V1662 7471G>T missense_variant ORF1ab_pp1a V2491F 1.00e+0 BA.1.17
V168 218G>T missense_variant ORF1ab_pp1a R73L 7.07e-1 BA.1.17
V1712 7783G>T missense_variant ORF1ab_pp1a V2595F 1.00e+0 BA.1.17
V1716 7810G>T missense_variant ORF1ab_pp1a V2604L 7.07e-1 BA.1.17
V1743 7913G>T missense_variant ORF1ab_pp1a R2638L 1.00e+0 BA.1.17
V175 230G>T missense_variant ORF1ab_pp1a R77L 1.00e+0 BA.1.17
V1753 8002G>T missense_variant ORF1ab_pp1a D2668Y 1.00e+0 BA.1.17
V1760 8057G>T missense_variant ORF1ab_pp1a R2686L 1.00e+0 BA.1.17
V1766 8090G>T missense_variant ORF1ab_pp1a R2697L 1.00e+0 BA.1.17
V1774 8143G>T missense_variant ORF1ab_pp1a V2715F 1.00e+0 BA.1.17
V1777 8177G>T missense_variant ORF1ab_pp1a R2726L 1.00e+0 BA.1.17
V1778 8189G>T missense_variant ORF1ab_pp1a R2730L 1.00e+0 BA.1.17
V1819 8453G>T missense_variant ORF1ab_pp1a R2818L 1.00e+0 BA.1.17
V1829 8522G>T missense_variant ORF1ab_pp1a R2841L 1.00e+0 BA.1.17
V1846 8596G>T missense_variant ORF1ab_pp1a V2866L 1.00e+0 BA.1.17
V1857 8624G>T missense_variant ORF1ab_pp1a R2875L 1.00e+0 BA.1.17
V1883 8846G>T missense_variant ORF1ab_pp1a R2949L 1.00e+0 BA.1.17
V1886 8858G>T missense_variant ORF1ab_pp1a R2953L 1.00e+0 BA.1.17
V1900 8959G>T missense_variant ORF1ab_pp1a G2987C 1.00e+0 BA.1.17
V1964 9581G>T missense_variant ORF1ab_pp1a R3194L 1.00e+0 BA.1.17
V1979 9703G>T missense_variant ORF1ab_pp1a A3235S 1.00e+0 BA.1.17
V1993 9874G>T missense_variant ORF1ab_pp1a G3292C 1.00e+0 BA.1.17
V1997 9892G>T missense_variant ORF1ab_pp1a V3298L 1.00e+0 BA.1.17
V2005 9968G>T missense_variant ORF1ab_pp1a R3323L 1.00e+0 BA.1.17
V2030 10103G>T missense_variant ORF1ab_pp1a R3368L 1.00e+0 BA.1.17
V2055 10417G>T missense_variant ORF1ab_pp1a A3473S 1.00e+0 BA.1.17
V2060 10454G>T missense_variant ORF1ab_pp1a R3485L 1.00e+0 BA.1.17
V207 277G>T stop_gained ORF1ab_pp1a E93* 1.00e+0 BA.1.17
V2079 10570G>T missense_variant ORF1ab_pp1a V3524F 7.07e-1 BA.1.17
V2087 10625G>T missense_variant ORF1ab_pp1a R3542L 1.00e+0 BA.1.17
V21 -165G>T upstream_gene_variant ORF1ab_pp1a None 7.07e-1 BA.1.17
V212 292G>T missense_variant ORF1ab_pp1a G98C 1.00e+0 BA.1.17
V215 296G>T missense_variant ORF1ab_pp1a R99L 1.00e+0 BA.1.17
V2151 10985G>T missense_variant ORF1ab_pp1a R3662L 1.00e+0 BA.1.17
V2238 11405G>T missense_variant ORF1ab_pp1a R3802L 1.00e+0 BA.1.17
V228 337G>T stop_gained ORF1ab_pp1a E113* 1.00e+0 BA.1.17
V2310 11978G>T missense_variant ORF1ab_pp1a R3993L 1.00e+0 BA.1.17
V2313 11996G>T missense_variant ORF1ab_pp1a R3999L 1.00e+0 BA.1.17
V2358 12449G>T missense_variant ORF1ab_pp1a R4150L 1.00e+0 BA.1.17
V2362 12469G>T missense_variant ORF1ab_pp1a G4157C 1.00e+0 BA.1.17
V2386 12559G>T missense_variant ORF1ab_pp1a D4187Y 1.00e+0 BA.1.17
V239 356G>T missense_variant ORF1ab_pp1a R119L 1.00e+0 BA.1.17
V2406 12752G>T missense_variant ORF1ab_pp1a R4251L 1.00e+0 BA.1.17
V2424 12992G>T missense_variant ORF1ab_pp1a R4331L 1.00e+0 BA.1.17
V243 371G>T missense_variant ORF1ab_pp1a R124L 1.00e+0 BA.1.17
V2438 13114G>T missense_variant ORF1ab_pp1a V4372F 1.00e+0 BA.1.17
V2439 13120G>T missense_variant ORF1ab_pp1a G4374C 7.07e-1 BA.1.17
V2446 13162G>T stop_gained ORF1ab_pp1a E4388* 1.00e+0 BA.1.17
V245 379G>T missense_variant ORF1ab_pp1a G127C 1.00e+0 BA.1.17
V2452 13204G>T missense_variant ORF1ab_pp1a G4402W 1.00e+0 BA.1.17
V2453 13213G>T missense_variant ORF1ab_pp1ab G4405C 1.00e+0 BA.1.17
V2456 13229G>T missense_variant ORF1ab_pp1ab R4410L 1.00e+0 BA.1.17
V2459 13243G>T missense_variant ORF1ab_pp1ab G4415C 1.00e+0 BA.1.17
V2463 13267G>T missense_variant ORF1ab_pp1ab V4423L 1.00e+0 BA.1.17
V2470 13340G>T missense_variant ORF1ab_pp1ab R4447L 1.00e+0 BA.1.17
V2474 13357G>T stop_gained ORF1ab_pp1ab E4453* 1.00e+0 BA.1.17
V2496 13498G>T missense_variant ORF1ab_pp1ab G4500C 1.00e+0 BA.1.17
V2500 13523G>T missense_variant ORF1ab_pp1ab R4508L 1.00e+0 BA.1.17
V2503 13529G>T missense_variant ORF1ab_pp1ab R4510L 1.00e+0 BA.1.17
V2507 13558G>T missense_variant ORF1ab_pp1ab V4520F 1.00e+0 BA.1.17
V251 409G>T missense_variant ORF1ab_pp1a G137C 1.00e+0 BA.1.17
V2528 13694G>T missense_variant ORF1ab_pp1ab R4565L 1.00e+0 BA.1.17
V2529 13696G>T missense_variant ORF1ab_pp1ab V4566L 1.00e+0 BA.1.17
V2532 13702G>T missense_variant ORF1ab_pp1ab A4568S 1.00e+0 BA.1.17
V2535 13724G>T missense_variant ORF1ab_pp1ab R4575L 1.00e+0 BA.1.17
V2540 13766G>T missense_variant ORF1ab_pp1ab R4589L 1.00e+0 BA.1.17
V2543 13834G>T missense_variant ORF1ab_pp1ab G4612C 1.00e+0 BA.1.17
V255 412G>T missense_variant ORF1ab_pp1a A138S 1.00e+0 BA.1.17
V257 415G>T missense_variant ORF1ab_pp1a D139Y 1.00e+0 BA.1.17
V2584 14030G>T missense_variant ORF1ab_pp1ab R4677L 1.00e+0 BA.1.17
V2612 14320G>T missense_variant ORF1ab_pp1ab A4774S 1.00e+0 BA.1.17
V2615 14351G>T missense_variant ORF1ab_pp1ab R4784L 1.00e+0 BA.1.17
V2620 14413G>T missense_variant ORF1ab_pp1ab G4805C 1.00e+0 BA.1.17
V2631 14530G>T missense_variant ORF1ab_pp1ab D4844Y 1.00e+0 BA.1.17
V2632 14546G>T missense_variant ORF1ab_pp1ab R4849L 1.00e+0 BA.1.17
V2641 14659G>T missense_variant ORF1ab_pp1ab V4887F 1.00e+0 BA.1.17
V2652 14761G>T missense_variant ORF1ab_pp1ab A4921S 1.00e+0 BA.1.17
V2654 14774G>T missense_variant ORF1ab_pp1ab R4925L 1.00e+0 BA.1.17
V2656 14840G>T missense_variant ORF1ab_pp1ab R4947L 1.00e+0 BA.1.17
V2657 14845G>T missense_variant ORF1ab_pp1ab V4949L 1.00e+0 BA.1.17
V2660 14917G>T missense_variant ORF1ab_pp1ab A4973S 1.00e+0 BA.1.17
V2680 15095G>T missense_variant ORF1ab_pp1ab R5032L 1.00e+0 BA.1.17
V2687 15128G>T missense_variant ORF1ab_pp1ab R5043L 1.00e+0 BA.1.17
V269 439G>T missense_variant ORF1ab_pp1a D147Y 1.00e+0 BA.1.17
V2695 15187G>T missense_variant ORF1ab_pp1ab G5063C 1.00e+0 BA.1.17
V270 442G>T stop_gained ORF1ab_pp1a E148* 1.00e+0 BA.1.17
V2702 15325G>T missense_variant ORF1ab_pp1ab D5109Y 1.00e+0 BA.1.17
V2706 15338G>T missense_variant ORF1ab_pp1ab R5113L 1.00e+0 BA.1.17
V2715 15415G>T missense_variant ORF1ab_pp1ab A5139S 1.00e+0 BA.1.17
V2716 15425G>T missense_variant ORF1ab_pp1ab R5142L 7.07e-1 BA.1.17
V2719 15457G>T missense_variant ORF1ab_pp1ab D5153Y 1.00e+0 BA.1.17
V2743 15697G>T missense_variant ORF1ab_pp1ab G5233C 1.00e+0 BA.1.17
V2746 15749G>T missense_variant ORF1ab_pp1ab R5250L 1.00e+0 BA.1.17
V2747 15754G>T missense_variant ORF1ab_pp1ab V5252L 1.00e+0 BA.1.17
V2772 16034G>T missense_variant ORF1ab_pp1ab R5345L 1.00e+0 BA.1.17
V2796 16273G>T missense_variant ORF1ab_pp1ab D5425Y 1.00e+0 BA.1.17
V2812 16436G>T missense_variant ORF1ab_pp1ab R5479L 1.00e+0 BA.1.17
V2822 16505G>T missense_variant ORF1ab_pp1ab R5502L 1.00e+0 BA.1.17
V2823 16529G>T missense_variant ORF1ab_pp1ab R5510L 1.00e+0 BA.1.17
V2834 16607G>T missense_variant ORF1ab_pp1ab R5536L 1.00e+0 BA.1.17
V285 512G>T missense_variant ORF1ab_pp1a R171L 1.00e+0 BA.1.17
V287 524G>T missense_variant ORF1ab_pp1a R175L 1.00e+0 BA.1.17
V2880 16880G>T missense_variant ORF1ab_pp1ab R5627L 1.00e+0 BA.1.17
V2884 16909G>T missense_variant ORF1ab_pp1ab A5637S 1.00e+0 BA.1.17
V289 535G>T stop_gained ORF1ab_pp1a G179* 1.00e+0 BA.1.17
V2894 16982G>T missense_variant ORF1ab_pp1ab R5661L 1.00e+0 BA.1.17
V2896 16988G>T missense_variant ORF1ab_pp1ab R5663L 1.00e+0 BA.1.17
V29 -142G>T upstream_gene_variant ORF1ab_pp1a None 7.07e-1 BA.1.17
V2919 17173G>T missense_variant ORF1ab_pp1ab D5725Y 1.00e+0 BA.1.17
V2923 17198G>T missense_variant ORF1ab_pp1ab R5733L 1.00e+0 BA.1.17
V2933 17287G>T stop_gained ORF1ab_pp1ab G5763* 1.00e+0 BA.1.17
V2935 17297G>T missense_variant ORF1ab_pp1ab R5766L 1.00e+0 BA.1.17
V2936 17300G>T missense_variant ORF1ab_pp1ab R5767L 1.00e+0 BA.1.17
V2956 17455G>T missense_variant ORF1ab_pp1ab V5819L 1.00e+0 BA.1.17
V296 551G>T missense_variant ORF1ab_pp1a R184L 1.00e+0 BA.1.17
V2960 17477G>T missense_variant ORF1ab_pp1ab R5826L 1.00e+0 BA.1.17
V297 559G>T missense_variant ORF1ab_pp1a D187Y 1.00e+0 BA.1.17
V2992 17753G>T missense_variant ORF1ab_pp1ab R5918L 1.00e+0 BA.1.17
V3039 18002G>T missense_variant ORF1ab_pp1ab R6001L 1.00e+0 BA.1.17
V3040 18004G>T stop_gained ORF1ab_pp1ab E6002* 1.00e+0 BA.1.17
V3045 18026G>T missense_variant ORF1ab_pp1ab R6009L 1.00e+0 BA.1.17
V3048 18043G>T missense_variant ORF1ab_pp1ab D6015Y 1.00e+0 BA.1.17
V3049 18049G>T stop_gained ORF1ab_pp1ab E6017* 1.00e+0 BA.1.17
V3085 18263G>T missense_variant ORF1ab_pp1ab R6088L 1.00e+0 BA.1.17
V3092 18319G>T missense_variant ORF1ab_pp1ab V6107L 7.07e-1 BA.1.17
V3102 18389G>T missense_variant ORF1ab_pp1ab R6130L 1.00e+0 BA.1.17
V3105 18413G>T missense_variant ORF1ab_pp1ab R6138L 7.07e-1 BA.1.17
V311 620G>T missense_variant ORF1ab_pp1a R207L 1.00e+0 BA.1.17
V3115 18481G>T missense_variant ORF1ab_pp1ab V6161F 1.00e+0 BA.1.17
V3130 18625G>T stop_gained ORF1ab_pp1ab E6209* 1.00e+0 BA.1.17
V3135 18641G>T missense_variant ORF1ab_pp1ab R6214L 1.00e+0 BA.1.17
V3187 18943G>T missense_variant ORF1ab_pp1ab D6315Y 1.00e+0 BA.1.17
V321 649G>T stop_gained ORF1ab_pp1a E217* 1.00e+0 BA.1.17
V3216 19202G>T missense_variant ORF1ab_pp1ab R6401L 1.00e+0 BA.1.17
V3220 19261G>T missense_variant ORF1ab_pp1ab D6421Y 7.07e-1 BA.1.17
V3254 19538G>T missense_variant ORF1ab_pp1ab R6513L 1.00e+0 BA.1.17
V3293 19769G>T missense_variant ORF1ab_pp1ab R6590L 1.00e+0 BA.1.17
V332 695G>T missense_variant ORF1ab_pp1a R232L 7.07e-1 BA.1.17
V3331 20027G>T missense_variant ORF1ab_pp1ab R6676L 1.00e+0 BA.1.17
V3334 20053G>T stop_gained ORF1ab_pp1ab E6685* 1.00e+0 BA.1.17
V3338 20062G>T missense_variant ORF1ab_pp1ab V6688F 7.07e-1 BA.1.17
V336 731G>T missense_variant ORF1ab_pp1a R244L 1.00e+0 BA.1.17
V3415 20527G>T missense_variant ORF1ab_pp1ab A6843S 1.00e+0 BA.1.17
V3428 20683G>T missense_variant ORF1ab_pp1ab D6895Y 1.00e+0 BA.1.17
V3444 20791G>T missense_variant ORF1ab_pp1ab D6931Y 1.00e+0 BA.1.17
V3462 20893G>T missense_variant ORF1ab_pp1ab V6965L 7.07e-1 BA.1.17
V3487 21041G>T missense_variant ORF1ab_pp1ab R7014L 1.00e+0 BA.1.17
V3488 21043G>T stop_gained ORF1ab_pp1ab E7015* 1.00e+0 BA.1.17
V3517 -5G>T upstream_gene_variant S None 1.00e+0 BA.1.17
V3562 101G>T missense_variant S R34L 1.00e+0 BA.1.17
V3621 367G>T missense_variant S A123S 1.00e+0 BA.1.17
V370 902G>T missense_variant ORF1ab_pp1a R301L 7.07e-1 BA.1.17
V38 -114G>T upstream_gene_variant ORF1ab_pp1a None 1.00e+0 BA.1.17
V3822 1030G>T missense_variant S A344S 1.00e+0 BA.1.17
V3959 1730G>T missense_variant S R577L 1.00e+0 BA.1.17
V396 1003G>T missense_variant ORF1ab_pp1a D335Y 7.07e-1 BA.1.17
V3985 1901G>T missense_variant S R634L 1.00e+0 BA.1.17
V3991 1937G>T missense_variant S R646L 1.00e+0 BA.1.17
V4005 2014G>T missense_variant S A672S 7.07e-1 BA.1.17
V401 1024G>T stop_gained ORF1ab_pp1a E342* 1.00e+0 BA.1.17
V4025 2045G>T missense_variant S R682L 1.00e+0 BA.1.17
V4029 2054G>T missense_variant S R685L 7.07e-1 BA.1.17
V41 -101G>T upstream_gene_variant ORF1ab_pp1a None 1.00e+0 BA.1.17
V4150 2948G>T missense_variant S R983L 1.00e+0 BA.1.17
V4235 3554G>T missense_variant S R1185L 1.00e+0 BA.1.17
V4302 -6G>T upstream_gene_variant ORF3a None 1.00e+0 BA.1.17
V4345 89G>T missense_variant ORF3a R30L 1.00e+0 BA.1.17
V437 1156G>T stop_gained ORF1ab_pp1a E386* 1.00e+0 BA.1.17
V4379 130G>T stop_gained ORF3a G44* 1.00e+0 BA.1.17
V4391 148G>T missense_variant ORF3a V50F 1.00e+0 BA.1.17
V4410 175G>T missense_variant ORF3a A59S 7.07e-1 BA.1.17
V446 1193G>T missense_variant ORF1ab_pp1a R398L 1.00e+0 BA.1.17
V453 1205G>T missense_variant ORF1ab_pp1a R402L 1.00e+0 BA.1.17
V4614 751G>T missense_variant ORF3a G251C 1.00e+0 BA.1.17
V4620 760G>T stop_gained ORF3a G254* 7.07e-1 BA.1.17
V4672 70G>T missense_variant E V24L 1.00e+0 BA.1.17
V4686 182G>T missense_variant E R61L 1.00e+0 BA.1.17
V469 1285G>T missense_variant ORF1ab_pp1a A429S 7.07e-1 BA.1.17
V4722 16G>T missense_variant M G6C 7.07e-1 BA.1.17
V4757 232G>T missense_variant M G78C 7.07e-1 BA.1.17
V4763 247G>T missense_variant M A83S 1.00e+0 BA.1.17
V4772 320G>T missense_variant M R107L 1.00e+0 BA.1.17
V484 1330G>T stop_gained ORF1ab_pp1a E444* 1.00e+0 BA.1.17
V4895 121G>T stop_gained ORF7a E41* 7.07e-1 BA.1.17
V4943 233G>T missense_variant ORF7a R78L 1.00e+0 BA.1.17
V5056 127G>T missense_variant ORF7b A43S 1.00e+0 BA.1.17
V511 1420G>T missense_variant ORF1ab_pp1a A474S 1.00e+0 BA.1.17
V5173 223G>T missense_variant ORF8 D75Y 7.07e-1 BA.1.17
V5196 302G>T missense_variant ORF8 R101L 1.00e+0 BA.1.17
V5209 340G>T missense_variant ORF8 V114F 7.07e-1 BA.1.17
V5212 344G>T missense_variant ORF8 R115L 7.07e-1 BA.1.17
V5234 -12G>T upstream_gene_variant N None 1.00e+0 BA.1.17
V5266 29G>T missense_variant N R10L 7.07e-1 BA.1.17
V5277 41G>T missense_variant N R14L 1.00e+0 BA.1.17
V5324 107G>T missense_variant N R36L 7.07e-1 BA.1.17
V5331 119G>T missense_variant N R40L 1.00e+0 BA.1.17
V5349 214G>T missense_variant N V72F 1.00e+0 BA.1.17
V5355 263G>T missense_variant N R88L 1.00e+0 BA.1.17
V5359 278G>T missense_variant N R93L 1.00e+0 BA.1.17
V5361 284G>T missense_variant N R95L 7.07e-1 BA.1.17
V5364 295G>T missense_variant N G99C 1.00e+0 BA.1.17
V5379 385G>T missense_variant N G129C 1.00e+0 BA.1.17
V5395 446G>T missense_variant N R149L 1.00e+0 BA.1.17
V5404 472G>T missense_variant N V158L 1.00e+0 BA.1.17
V5429 554G>T missense_variant N R185L 1.00e+0 BA.1.17
V5434 566G>T missense_variant N R189L 1.00e+0 BA.1.17
V5437 572G>T missense_variant N R191L 7.07e-1 BA.1.17
V5536 776G>T missense_variant N R259L 1.00e+0 BA.1.17
V5537 785G>T missense_variant N R262L 1.00e+0 BA.1.17
V5546 823G>T missense_variant N G275C 7.07e-1 BA.1.17
V5547 830G>T missense_variant N R277L 1.00e+0 BA.1.17
V556 1634G>T missense_variant ORF1ab_pp1a R545L 1.00e+0 BA.1.17
V5565 931G>T missense_variant N A311S 7.07e-1 BA.1.17
V5566 946G>T stop_gained N G316* 1.00e+0 BA.1.17
V563 1649G>T missense_variant ORF1ab_pp1a R550L 1.00e+0 BA.1.17
V5690 22G>T missense_variant ORF10 A8S 1.00e+0 BA.1.17
V581 1696G>T missense_variant ORF1ab_pp1a A566S 7.07e-1 BA.1.17
V5875 222G>T synonymous_variant ORF1ab_pp1a S74S 7.07e-1 BA.1.17
V5998 921G>T synonymous_variant ORF1ab_pp1a A307A 1.00e+0 BA.1.17
V6010 999G>T synonymous_variant ORF1ab_pp1a T333T 7.07e-1 BA.1.17
V6121 1830G>T synonymous_variant ORF1ab_pp1a S610S 1.00e+0 BA.1.17
V643 1933G>T missense_variant ORF1ab_pp1a G645C 7.07e-1 BA.1.17
V657 1981G>T missense_variant ORF1ab_pp1a G661C 1.00e+0 BA.1.17
V6634 5592G>T synonymous_variant ORF1ab_pp1a T1864T 1.00e+0 BA.1.17
V6686 6006G>T synonymous_variant ORF1ab_pp1a T2002T 1.00e+0 BA.1.17
V6704 6099G>T synonymous_variant ORF1ab_pp1a A2033A 7.07e-1 BA.1.17
V69 -62G>T upstream_gene_variant ORF1ab_pp1a None 7.07e-1 BA.1.17
V6908 7791G>T synonymous_variant ORF1ab_pp1a T2597T 1.00e+0 BA.1.17
V6950 8088G>T synonymous_variant ORF1ab_pp1a A2696A 1.00e+0 BA.1.17
V6952 8103G>T synonymous_variant ORF1ab_pp1a A2701A 1.00e+0 BA.1.17
V7125 9537G>T synonymous_variant ORF1ab_pp1a A3179A 1.00e+0 BA.1.17
V7140 9606G>T synonymous_variant ORF1ab_pp1a T3202T 1.00e+0 BA.1.17
V72 -58G>T upstream_gene_variant ORF1ab_pp1a None 1.00e+0 BA.1.17
V747 2359G>T missense_variant ORF1ab_pp1a G787W 1.00e+0 BA.1.17
V752 2374G>T stop_gained ORF1ab_pp1a E792* 1.00e+0 BA.1.17
V7559 12936G>T synonymous_variant ORF1ab_pp1a P4312P 1.00e+0 BA.1.17
V7602 13194G>T synonymous_variant ORF1ab_pp1a S4398S 7.07e-1 BA.1.17
V7604 13239G>T synonymous_variant ORF1ab_pp1ab P4413P 1.00e+0 BA.1.17
V762 2452G>T missense_variant ORF1ab_pp1a G818C 1.00e+0 BA.1.17
V7677 13854G>T synonymous_variant ORF1ab_pp1ab T4618T 7.07e-1 BA.1.17
V7751 14358G>T synonymous_variant ORF1ab_pp1ab T4786T 1.00e+0 BA.1.17
V782 2593G>T missense_variant ORF1ab_pp1a G865C 1.00e+0 BA.1.17
V787 2614G>T missense_variant ORF1ab_pp1a A872S 1.00e+0 BA.1.17
V7951 15957G>T synonymous_variant ORF1ab_pp1ab P5319P 1.00e+0 BA.1.17
V81 -47G>T upstream_gene_variant ORF1ab_pp1a None 7.07e-1 BA.1.17
V8388 19191G>T synonymous_variant ORF1ab_pp1ab T6397T 1.00e+0 BA.1.17
V8502 20205G>T synonymous_variant ORF1ab_pp1ab A6735A 1.00e+0 BA.1.17
V8519 20406G>T synonymous_variant ORF1ab_pp1ab A6802A 7.07e-1 BA.1.17
V8549 20673G>T synonymous_variant ORF1ab_pp1ab T6891T 7.07e-1 BA.1.17
V8698 489G>T synonymous_variant S A163A 7.07e-1 BA.1.17
V882 2977G>T missense_variant ORF1ab_pp1a G993C 7.07e-1 BA.1.17
V8973 2637G>T synonymous_variant S A879A 1.00e+0 BA.1.17
V9003 2883G>T synonymous_variant S T961T 1.00e+0 BA.1.17
V9151 102G>T synonymous_variant ORF3a T34T 7.07e-1 BA.1.17
V9253 801G>T synonymous_variant ORF3a P267P 1.00e+0 BA.1.17
V9254 804G>T synonymous_variant ORF3a T268T 1.00e+0 BA.1.17
V9550 309G>T synonymous_variant ORF8 S103S 1.00e+0 BA.1.17
V978 3319G>T stop_gained ORF1ab_pp1a G1107* 1.00e+0 BA.1.17
V9824 30G>T synonymous_variant ORF10 P10P 7.07e-1 BA.1.17
V9825 36G>T synonymous_variant ORF10 T12T 7.07e-1 BA.1.17
V988 3355G>T missense_variant ORF1ab_pp1a G1119C 1.00e+0 BA.1.17
V1002 3424G>T stop_gained ORF1ab_pp1a E1142* 1.00e+0 BA.1.18
V1026 3509G>T missense_variant ORF1ab_pp1a R1170L 1.00e+0 BA.1.18
V103 -20G>T upstream_gene_variant ORF1ab_pp1a None 8.16e-1 BA.1.18
V11 -194G>T upstream_gene_variant ORF1ab_pp1a None 1.00e+0 BA.1.18
V111 -10G>T upstream_gene_variant ORF1ab_pp1a None 1.00e+0 BA.1.18
V1133 4127G>T missense_variant ORF1ab_pp1a R1376L 1.00e+0 BA.1.18
V1139 4157G>T missense_variant ORF1ab_pp1a R1386L 1.00e+0 BA.1.18
V1146 4211G>T missense_variant ORF1ab_pp1a R1404L 1.00e+0 BA.1.18
V1159 4318G>T missense_variant ORF1ab_pp1a D1440Y 1.00e+0 BA.1.18
V1164 4391G>T missense_variant ORF1ab_pp1a R1464L 1.00e+0 BA.1.18
V118 28G>T stop_gained ORF1ab_pp1a E10* 1.00e+0 BA.1.18
V120 40G>T missense_variant ORF1ab_pp1a V14F 1.00e+0 BA.1.18
V124 71G>T missense_variant ORF1ab_pp1a R24L 7.07e-1 BA.1.18
V125 73G>T missense_variant ORF1ab_pp1a D25Y 1.00e+0 BA.1.18
V1252 4883G>T missense_variant ORF1ab_pp1a R1628L 1.00e+0 BA.1.18
V126 76G>T missense_variant ORF1ab_pp1a V26L 7.07e-1 BA.1.18
V1298 5248G>T missense_variant ORF1ab_pp1a V1750L 1.00e+0 BA.1.18
V132 86G>T missense_variant ORF1ab_pp1a R29L 1.00e+0 BA.1.18
V1345 5548G>T missense_variant ORF1ab_pp1a G1850C 1.00e+0 BA.1.18
V1374 5767G>T missense_variant ORF1ab_pp1a A1923S 1.00e+0 BA.1.18
V139 103G>T missense_variant ORF1ab_pp1a V35L 1.00e+0 BA.1.18
V1409 6032G>T missense_variant ORF1ab_pp1a R2011L 1.00e+0 BA.1.18
V1432 6097G>T missense_variant ORF1ab_pp1a A2033S 1.00e+0 BA.1.18
V1439 6124G>T stop_gained ORF1ab_pp1a E2042* 1.00e+0 BA.1.18
V1458 6181G>T missense_variant ORF1ab_pp1a V2061F 8.16e-1 BA.1.18
V146 128G>T missense_variant ORF1ab_pp1a R43L 1.00e+0 BA.1.18
V1464 6208G>T stop_gained ORF1ab_pp1a E2070* 1.00e+0 BA.1.18
V1544 6476G>T missense_variant ORF1ab_pp1a R2159L 1.00e+0 BA.1.18
V1546 6488G>T missense_variant ORF1ab_pp1a R2163L 1.00e+0 BA.1.18
V1565 6619G>T missense_variant ORF1ab_pp1a G2207C 8.16e-1 BA.1.18
V1578 6742G>T missense_variant ORF1ab_pp1a A2248S 1.00e+0 BA.1.18
V162 178G>T missense_variant ORF1ab_pp1a V60F 8.16e-1 BA.1.18
V1644 7207G>T missense_variant ORF1ab_pp1a G2403C 1.00e+0 BA.1.18
V1649 7244G>T missense_variant ORF1ab_pp1a R2415L 1.00e+0 BA.1.18
V1651 7264G>T stop_gained ORF1ab_pp1a E2422* 1.00e+0 BA.1.18
V1662 7471G>T missense_variant ORF1ab_pp1a V2491F 1.00e+0 BA.1.18
V168 218G>T missense_variant ORF1ab_pp1a R73L 1.00e+0 BA.1.18
V1712 7783G>T missense_variant ORF1ab_pp1a V2595F 1.00e+0 BA.1.18
V1716 7810G>T missense_variant ORF1ab_pp1a V2604L 8.16e-1 BA.1.18
V1743 7913G>T missense_variant ORF1ab_pp1a R2638L 1.00e+0 BA.1.18
V175 230G>T missense_variant ORF1ab_pp1a R77L 1.00e+0 BA.1.18
V1753 8002G>T missense_variant ORF1ab_pp1a D2668Y 1.00e+0 BA.1.18
V1760 8057G>T missense_variant ORF1ab_pp1a R2686L 1.00e+0 BA.1.18
V1766 8090G>T missense_variant ORF1ab_pp1a R2697L 1.00e+0 BA.1.18
V1774 8143G>T missense_variant ORF1ab_pp1a V2715F 1.00e+0 BA.1.18
V1777 8177G>T missense_variant ORF1ab_pp1a R2726L 1.00e+0 BA.1.18
V1778 8189G>T missense_variant ORF1ab_pp1a R2730L 1.00e+0 BA.1.18
V1819 8453G>T missense_variant ORF1ab_pp1a R2818L 1.00e+0 BA.1.18
V1829 8522G>T missense_variant ORF1ab_pp1a R2841L 1.00e+0 BA.1.18
V1846 8596G>T missense_variant ORF1ab_pp1a V2866L 1.00e+0 BA.1.18
V1857 8624G>T missense_variant ORF1ab_pp1a R2875L 1.00e+0 BA.1.18
V1883 8846G>T missense_variant ORF1ab_pp1a R2949L 1.00e+0 BA.1.18
V1886 8858G>T missense_variant ORF1ab_pp1a R2953L 1.00e+0 BA.1.18
V1900 8959G>T missense_variant ORF1ab_pp1a G2987C 1.00e+0 BA.1.18
V1961 9491G>T missense_variant ORF1ab_pp1a R3164L 1.00e+0 BA.1.18
V1964 9581G>T missense_variant ORF1ab_pp1a R3194L 1.00e+0 BA.1.18
V1979 9703G>T missense_variant ORF1ab_pp1a A3235S 1.00e+0 BA.1.18
V1993 9874G>T missense_variant ORF1ab_pp1a G3292C 1.00e+0 BA.1.18
V1997 9892G>T missense_variant ORF1ab_pp1a V3298L 1.00e+0 BA.1.18
V2005 9968G>T missense_variant ORF1ab_pp1a R3323L 6.32e-1 BA.1.18
V2030 10103G>T missense_variant ORF1ab_pp1a R3368L 1.00e+0 BA.1.18
V2055 10417G>T missense_variant ORF1ab_pp1a A3473S 1.00e+0 BA.1.18
V2060 10454G>T missense_variant ORF1ab_pp1a R3485L 1.00e+0 BA.1.18
V207 277G>T stop_gained ORF1ab_pp1a E93* 1.00e+0 BA.1.18
V2079 10570G>T missense_variant ORF1ab_pp1a V3524F 1.00e+0 BA.1.18
V2087 10625G>T missense_variant ORF1ab_pp1a R3542L 1.00e+0 BA.1.18
V21 -165G>T upstream_gene_variant ORF1ab_pp1a None 1.00e+0 BA.1.18
V212 292G>T missense_variant ORF1ab_pp1a G98C 1.00e+0 BA.1.18
V215 296G>T missense_variant ORF1ab_pp1a R99L 1.00e+0 BA.1.18
V2151 10985G>T missense_variant ORF1ab_pp1a R3662L 7.07e-1 BA.1.18
V2238 11405G>T missense_variant ORF1ab_pp1a R3802L 1.00e+0 BA.1.18
V228 337G>T stop_gained ORF1ab_pp1a E113* 1.00e+0 BA.1.18
V2310 11978G>T missense_variant ORF1ab_pp1a R3993L 1.00e+0 BA.1.18
V2313 11996G>T missense_variant ORF1ab_pp1a R3999L 1.00e+0 BA.1.18
V2358 12449G>T missense_variant ORF1ab_pp1a R4150L 1.00e+0 BA.1.18
V2362 12469G>T missense_variant ORF1ab_pp1a G4157C 1.00e+0 BA.1.18
V2386 12559G>T missense_variant ORF1ab_pp1a D4187Y 1.00e+0 BA.1.18
V239 356G>T missense_variant ORF1ab_pp1a R119L 1.00e+0 BA.1.18
V2406 12752G>T missense_variant ORF1ab_pp1a R4251L 1.00e+0 BA.1.18
V2424 12992G>T missense_variant ORF1ab_pp1a R4331L 1.00e+0 BA.1.18
V243 371G>T missense_variant ORF1ab_pp1a R124L 1.00e+0 BA.1.18
V2438 13114G>T missense_variant ORF1ab_pp1a V4372F 1.00e+0 BA.1.18
V2439 13120G>T missense_variant ORF1ab_pp1a G4374C 1.00e+0 BA.1.18
V2445 13160G>T missense_variant ORF1ab_pp1a R4387L 1.00e+0 BA.1.18
V2446 13162G>T stop_gained ORF1ab_pp1a E4388* 1.00e+0 BA.1.18
V245 379G>T missense_variant ORF1ab_pp1a G127C 8.16e-1 BA.1.18
V2452 13204G>T missense_variant ORF1ab_pp1a G4402W 1.00e+0 BA.1.18
V2453 13213G>T missense_variant ORF1ab_pp1ab G4405C 1.00e+0 BA.1.18
V2456 13229G>T missense_variant ORF1ab_pp1ab R4410L 1.00e+0 BA.1.18
V2459 13243G>T missense_variant ORF1ab_pp1ab G4415C 1.00e+0 BA.1.18
V2463 13267G>T missense_variant ORF1ab_pp1ab V4423L 1.00e+0 BA.1.18
V2470 13340G>T missense_variant ORF1ab_pp1ab R4447L 1.00e+0 BA.1.18
V2474 13357G>T stop_gained ORF1ab_pp1ab E4453* 1.00e+0 BA.1.18
V2496 13498G>T missense_variant ORF1ab_pp1ab G4500C 1.00e+0 BA.1.18
V2500 13523G>T missense_variant ORF1ab_pp1ab R4508L 1.00e+0 BA.1.18
V2503 13529G>T missense_variant ORF1ab_pp1ab R4510L 6.32e-1 BA.1.18
V2507 13558G>T missense_variant ORF1ab_pp1ab V4520F 1.00e+0 BA.1.18
V251 409G>T missense_variant ORF1ab_pp1a G137C 1.00e+0 BA.1.18
V2528 13694G>T missense_variant ORF1ab_pp1ab R4565L 1.00e+0 BA.1.18
V2529 13696G>T missense_variant ORF1ab_pp1ab V4566L 1.00e+0 BA.1.18
V2532 13702G>T missense_variant ORF1ab_pp1ab A4568S 1.00e+0 BA.1.18
V2534 13718G>T missense_variant ORF1ab_pp1ab R4573L 1.00e+0 BA.1.18
V2535 13724G>T missense_variant ORF1ab_pp1ab R4575L 1.00e+0 BA.1.18
V2540 13766G>T missense_variant ORF1ab_pp1ab R4589L 1.00e+0 BA.1.18
V2543 13834G>T missense_variant ORF1ab_pp1ab G4612C 1.00e+0 BA.1.18
V255 412G>T missense_variant ORF1ab_pp1a A138S 1.00e+0 BA.1.18
V2584 14030G>T missense_variant ORF1ab_pp1ab R4677L 1.00e+0 BA.1.18
V2612 14320G>T missense_variant ORF1ab_pp1ab A4774S 1.00e+0 BA.1.18
V2615 14351G>T missense_variant ORF1ab_pp1ab R4784L 1.00e+0 BA.1.18
V2620 14413G>T missense_variant ORF1ab_pp1ab G4805C 1.00e+0 BA.1.18
V2631 14530G>T missense_variant ORF1ab_pp1ab D4844Y 1.00e+0 BA.1.18
V2632 14546G>T missense_variant ORF1ab_pp1ab R4849L 1.00e+0 BA.1.18
V2641 14659G>T missense_variant ORF1ab_pp1ab V4887F 1.00e+0 BA.1.18
V2652 14761G>T missense_variant ORF1ab_pp1ab A4921S 1.00e+0 BA.1.18
V2654 14774G>T missense_variant ORF1ab_pp1ab R4925L 1.00e+0 BA.1.18
V2656 14840G>T missense_variant ORF1ab_pp1ab R4947L 1.00e+0 BA.1.18
V2657 14845G>T missense_variant ORF1ab_pp1ab V4949L 1.00e+0 BA.1.18
V2660 14917G>T missense_variant ORF1ab_pp1ab A4973S 1.00e+0 BA.1.18
V2680 15095G>T missense_variant ORF1ab_pp1ab R5032L 1.00e+0 BA.1.18
V2687 15128G>T missense_variant ORF1ab_pp1ab R5043L 1.00e+0 BA.1.18
V269 439G>T missense_variant ORF1ab_pp1a D147Y 1.00e+0 BA.1.18
V2695 15187G>T missense_variant ORF1ab_pp1ab G5063C 8.16e-1 BA.1.18
V270 442G>T stop_gained ORF1ab_pp1a E148* 1.00e+0 BA.1.18
V2702 15325G>T missense_variant ORF1ab_pp1ab D5109Y 1.00e+0 BA.1.18
V2706 15338G>T missense_variant ORF1ab_pp1ab R5113L 1.00e+0 BA.1.18
V2715 15415G>T missense_variant ORF1ab_pp1ab A5139S 1.00e+0 BA.1.18
V2716 15425G>T missense_variant ORF1ab_pp1ab R5142L 1.00e+0 BA.1.18
V2719 15457G>T missense_variant ORF1ab_pp1ab D5153Y 1.00e+0 BA.1.18
V2743 15697G>T missense_variant ORF1ab_pp1ab G5233C 1.00e+0 BA.1.18
V2746 15749G>T missense_variant ORF1ab_pp1ab R5250L 1.00e+0 BA.1.18
V2747 15754G>T missense_variant ORF1ab_pp1ab V5252L 1.00e+0 BA.1.18
V2772 16034G>T missense_variant ORF1ab_pp1ab R5345L 1.00e+0 BA.1.18
V2796 16273G>T missense_variant ORF1ab_pp1ab D5425Y 1.00e+0 BA.1.18
V2812 16436G>T missense_variant ORF1ab_pp1ab R5479L 1.00e+0 BA.1.18
V2822 16505G>T missense_variant ORF1ab_pp1ab R5502L 1.00e+0 BA.1.18
V2823 16529G>T missense_variant ORF1ab_pp1ab R5510L 1.00e+0 BA.1.18
V2834 16607G>T missense_variant ORF1ab_pp1ab R5536L 1.00e+0 BA.1.18
V285 512G>T missense_variant ORF1ab_pp1a R171L 1.00e+0 BA.1.18
V287 524G>T missense_variant ORF1ab_pp1a R175L 1.00e+0 BA.1.18
V2880 16880G>T missense_variant ORF1ab_pp1ab R5627L 1.00e+0 BA.1.18
V2884 16909G>T missense_variant ORF1ab_pp1ab A5637S 1.00e+0 BA.1.18
V289 535G>T stop_gained ORF1ab_pp1a G179* 1.00e+0 BA.1.18
V2894 16982G>T missense_variant ORF1ab_pp1ab R5661L 1.00e+0 BA.1.18
V2896 16988G>T missense_variant ORF1ab_pp1ab R5663L 1.00e+0 BA.1.18
V29 -142G>T upstream_gene_variant ORF1ab_pp1a None 1.00e+0 BA.1.18
V2919 17173G>T missense_variant ORF1ab_pp1ab D5725Y 1.00e+0 BA.1.18
V2923 17198G>T missense_variant ORF1ab_pp1ab R5733L 1.00e+0 BA.1.18
V2933 17287G>T stop_gained ORF1ab_pp1ab G5763* 1.00e+0 BA.1.18
V2935 17297G>T missense_variant ORF1ab_pp1ab R5766L 8.16e-1 BA.1.18
V2936 17300G>T missense_variant ORF1ab_pp1ab R5767L 1.00e+0 BA.1.18
V2956 17455G>T missense_variant ORF1ab_pp1ab V5819L 1.00e+0 BA.1.18
V296 551G>T missense_variant ORF1ab_pp1a R184L 1.00e+0 BA.1.18
V2960 17477G>T missense_variant ORF1ab_pp1ab R5826L 1.00e+0 BA.1.18
V297 559G>T missense_variant ORF1ab_pp1a D187Y 1.00e+0 BA.1.18
V2992 17753G>T missense_variant ORF1ab_pp1ab R5918L 1.00e+0 BA.1.18
V3016 17899A>T missense_variant ORF1ab_pp1ab I5967L 1.00e+0 BA.1.18
V3040 18004G>T stop_gained ORF1ab_pp1ab E6002* 1.00e+0 BA.1.18
V3045 18026G>T missense_variant ORF1ab_pp1ab R6009L 1.00e+0 BA.1.18
V3048 18043G>T missense_variant ORF1ab_pp1ab D6015Y 1.00e+0 BA.1.18
V3049 18049G>T stop_gained ORF1ab_pp1ab E6017* 1.00e+0 BA.1.18
V3085 18263G>T missense_variant ORF1ab_pp1ab R6088L 1.00e+0 BA.1.18
V3102 18389G>T missense_variant ORF1ab_pp1ab R6130L 1.00e+0 BA.1.18
V3105 18413G>T missense_variant ORF1ab_pp1ab R6138L 1.00e+0 BA.1.18
V311 620G>T missense_variant ORF1ab_pp1a R207L 1.00e+0 BA.1.18
V3115 18481G>T missense_variant ORF1ab_pp1ab V6161F 1.00e+0 BA.1.18
V3130 18625G>T stop_gained ORF1ab_pp1ab E6209* 1.00e+0 BA.1.18
V3135 18641G>T missense_variant ORF1ab_pp1ab R6214L 1.00e+0 BA.1.18
V3187 18943G>T missense_variant ORF1ab_pp1ab D6315Y 1.00e+0 BA.1.18
V321 649G>T stop_gained ORF1ab_pp1a E217* 1.00e+0 BA.1.18
V3216 19202G>T missense_variant ORF1ab_pp1ab R6401L 1.00e+0 BA.1.18
V3220 19261G>T missense_variant ORF1ab_pp1ab D6421Y 6.32e-1 BA.1.18
V3254 19538G>T missense_variant ORF1ab_pp1ab R6513L 1.00e+0 BA.1.18
V3293 19769G>T missense_variant ORF1ab_pp1ab R6590L 1.00e+0 BA.1.18
V3310 19870G>T missense_variant ORF1ab_pp1ab V6624L 8.16e-1 BA.1.18
V332 695G>T missense_variant ORF1ab_pp1a R232L 1.00e+0 BA.1.18
V3331 20027G>T missense_variant ORF1ab_pp1ab R6676L 1.00e+0 BA.1.18
V3334 20053G>T stop_gained ORF1ab_pp1ab E6685* 1.00e+0 BA.1.18
V3338 20062G>T missense_variant ORF1ab_pp1ab V6688F 1.00e+0 BA.1.18
V3345 20126G>T missense_variant ORF1ab_pp1ab R6709L 8.16e-1 BA.1.18
V336 731G>T missense_variant ORF1ab_pp1a R244L 1.00e+0 BA.1.18
V3415 20527G>T missense_variant ORF1ab_pp1ab A6843S 1.00e+0 BA.1.18
V3428 20683G>T missense_variant ORF1ab_pp1ab D6895Y 1.00e+0 BA.1.18
V3444 20791G>T missense_variant ORF1ab_pp1ab D6931Y 1.00e+0 BA.1.18
V3462 20893G>T missense_variant ORF1ab_pp1ab V6965L 1.00e+0 BA.1.18
V3475 20956G>T missense_variant ORF1ab_pp1ab A6986S 1.00e+0 BA.1.18
V3487 21041G>T missense_variant ORF1ab_pp1ab R7014L 1.00e+0 BA.1.18
V3488 21043G>T stop_gained ORF1ab_pp1ab E7015* 1.00e+0 BA.1.18
V3517 -5G>T upstream_gene_variant S None 1.00e+0 BA.1.18
V3562 101G>T missense_variant S R34L 1.00e+0 BA.1.18
V3621 367G>T missense_variant S A123S 1.00e+0 BA.1.18
V370 902G>T missense_variant ORF1ab_pp1a R301L 8.16e-1 BA.1.18
V3737 641G>T missense_variant S R214L 1.00e+0 BA.1.18
V38 -114G>T upstream_gene_variant ORF1ab_pp1a None 1.00e+0 BA.1.18
V3822 1030G>T missense_variant S A344S 1.00e+0 BA.1.18
V3857 1231G>T missense_variant S A411S 1.00e+0 BA.1.18
V3923 1478A>T missense_variant S Q493L 1.00e+0 BA.1.18
V3959 1730G>T missense_variant S R577L 7.07e-1 BA.1.18
V396 1003G>T missense_variant ORF1ab_pp1a D335Y 1.00e+0 BA.1.18
V3985 1901G>T missense_variant S R634L 1.00e+0 BA.1.18
V3991 1937G>T missense_variant S R646L 1.00e+0 BA.1.18
V4005 2014G>T missense_variant S A672S 1.00e+0 BA.1.18
V401 1024G>T stop_gained ORF1ab_pp1a E342* 1.00e+0 BA.1.18
V4025 2045G>T missense_variant S R682L 1.00e+0 BA.1.18
V4026 2048G>T missense_variant S R683L 1.00e+0 BA.1.18
V4029 2054G>T missense_variant S R685L 1.00e+0 BA.1.18
V4065 2294G>T missense_variant S R765L 7.07e-1 BA.1.18
V41 -101G>T upstream_gene_variant ORF1ab_pp1a None 8.16e-1 BA.1.18
V4150 2948G>T missense_variant S R983L 1.00e+0 BA.1.18
V4185 3272G>T missense_variant S R1091L 1.00e+0 BA.1.18
V4235 3554G>T missense_variant S R1185L 1.00e+0 BA.1.18
V4244 3595G>T missense_variant S D1199Y 8.16e-1 BA.1.18
V4289 3778G>T missense_variant S D1260Y 1.00e+0 BA.1.18
V4302 -6G>T upstream_gene_variant ORF3a None 1.00e+0 BA.1.18
V4345 89G>T missense_variant ORF3a R30L 8.16e-1 BA.1.18
V4347 91G>T missense_variant ORF3a A31S 8.16e-1 BA.1.18
V437 1156G>T stop_gained ORF1ab_pp1a E386* 1.00e+0 BA.1.18
V4379 130G>T stop_gained ORF3a G44* 1.00e+0 BA.1.18
V4391 148G>T missense_variant ORF3a V50F 1.00e+0 BA.1.18
V4410 175G>T missense_variant ORF3a A59S 1.00e+0 BA.1.18
V4459 289G>T missense_variant ORF3a V97F 8.16e-1 BA.1.18
V446 1193G>T missense_variant ORF1ab_pp1a R398L 1.00e+0 BA.1.18
V4512 401G>T missense_variant ORF3a R134L 8.16e-1 BA.1.18
V453 1205G>T missense_variant ORF1ab_pp1a R402L 1.00e+0 BA.1.18
V4614 751G>T missense_variant ORF3a G251C 1.00e+0 BA.1.18
V4620 760G>T stop_gained ORF3a G254* 7.07e-1 BA.1.18
V464 1277G>T missense_variant ORF1ab_pp1a R426L 6.32e-1 BA.1.18
V4652 817G>T missense_variant ORF3a V273L 7.07e-1 BA.1.18
V4672 70G>T missense_variant E V24L 1.00e+0 BA.1.18
V4678 145G>T missense_variant E V49L 8.16e-1 BA.1.18
V4686 182G>T missense_variant E R61L 1.00e+0 BA.1.18
V469 1285G>T missense_variant ORF1ab_pp1a A429S 1.00e+0 BA.1.18
V4722 16G>T missense_variant M G6C 7.07e-1 BA.1.18
V4757 232G>T missense_variant M G78C 7.07e-1 BA.1.18
V4763 247G>T missense_variant M A83S 1.00e+0 BA.1.18
V4772 320G>T missense_variant M R107L 8.16e-1 BA.1.18
V4782 473G>T missense_variant M R158L 7.07e-1 BA.1.18
V4788 593G>T missense_variant M R198L 7.07e-1 BA.1.18
V48 -92G>T upstream_gene_variant ORF1ab_pp1a None 6.32e-1 BA.1.18
V4800 13G>T missense_variant ORF6 V5F 1.00e+0 BA.1.18
V4812 59G>T missense_variant ORF6 R20M 8.16e-1 BA.1.18
V484 1330G>T stop_gained ORF1ab_pp1a E444* 1.00e+0 BA.1.18
V4895 121G>T stop_gained ORF7a E41* 1.00e+0 BA.1.18
V4930 208G>T missense_variant ORF7a G70C 1.00e+0 BA.1.18
V4932 211G>T missense_variant ORF7a V71L 1.00e+0 BA.1.18
V4937 220G>T missense_variant ORF7a V74F 7.07e-1 BA.1.18
V4943 233G>T missense_variant ORF7a R78L 8.16e-1 BA.1.18
V5056 127G>T missense_variant ORF7b A43S 1.00e+0 BA.1.18
V5061 -4G>T upstream_gene_variant ORF8 None 1.00e+0 BA.1.18
V511 1420G>T missense_variant ORF1ab_pp1a A474S 1.00e+0 BA.1.18
V5173 223G>T missense_variant ORF8 D75Y 8.16e-1 BA.1.18
V5176 229G>T missense_variant ORF8 G77C 1.00e+0 BA.1.18
V5196 302G>T missense_variant ORF8 R101L 8.16e-1 BA.1.18
V5209 340G>T missense_variant ORF8 V114F 1.00e+0 BA.1.18
V5212 344G>T missense_variant ORF8 R115L 8.16e-1 BA.1.18
V5234 -12G>T upstream_gene_variant N None 1.00e+0 BA.1.18
V5266 29G>T missense_variant N R10L 1.00e+0 BA.1.18
V5277 41G>T missense_variant N R14L 1.00e+0 BA.1.18
V5324 107G>T missense_variant N R36L 1.00e+0 BA.1.18
V5331 119G>T missense_variant N R40L 6.32e-1 BA.1.18
V5333 122G>T missense_variant N R41L 8.16e-1 BA.1.18
V5337 163G>T missense_variant N A55S 8.16e-1 BA.1.18
V5345 203G>T missense_variant N R68L 8.16e-1 BA.1.18
V5349 214G>T missense_variant N V72F 1.00e+0 BA.1.18
V5355 263G>T missense_variant N R88L 1.00e+0 BA.1.18
V5359 278G>T missense_variant N R93L 7.07e-1 BA.1.18
V5361 284G>T missense_variant N R95L 1.00e+0 BA.1.18
V5364 295G>T missense_variant N G99C 1.00e+0 BA.1.18
V5379 385G>T missense_variant N G129C 1.00e+0 BA.1.18
V5395 446G>T missense_variant N R149L 1.00e+0 BA.1.18
V5404 472G>T missense_variant N V158L 1.00e+0 BA.1.18
V5414 517G>T missense_variant N A173S 1.00e+0 BA.1.18
V5419 535G>T missense_variant N G179C 1.00e+0 BA.1.18
V5429 554G>T missense_variant N R185L 1.00e+0 BA.1.18
V5434 566G>T missense_variant N R189L 7.07e-1 BA.1.18
V5437 572G>T missense_variant N R191L 1.00e+0 BA.1.18
V5467 611G>T missense_variant N G204V 8.16e-1 BA.1.18
V5536 776G>T missense_variant N R259L 1.00e+0 BA.1.18
V5537 785G>T missense_variant N R262L 1.00e+0 BA.1.18
V554 1625G>T missense_variant ORF1ab_pp1a R542L 8.16e-1 BA.1.18
V5546 823G>T missense_variant N G275C 1.00e+0 BA.1.18
V5547 830G>T missense_variant N R277L 1.00e+0 BA.1.18
V556 1634G>T missense_variant ORF1ab_pp1a R545L 1.00e+0 BA.1.18
V5565 931G>T missense_variant N A311S 1.00e+0 BA.1.18
V5566 946G>T stop_gained N G316* 1.00e+0 BA.1.18
V5570 956G>T missense_variant N R319L 1.00e+0 BA.1.18
V563 1649G>T missense_variant ORF1ab_pp1a R550L 1.00e+0 BA.1.18
V5688 16G>T missense_variant ORF10 V6F 8.16e-1 BA.1.18
V5690 22G>T missense_variant ORF10 A8S 8.16e-1 BA.1.18
V574 1679G>T missense_variant ORF1ab_pp1a R560L 1.00e+0 BA.1.18
V581 1696G>T missense_variant ORF1ab_pp1a A566S 1.00e+0 BA.1.18
V5970 726G>T synonymous_variant ORF1ab_pp1a T242T 1.00e+0 BA.1.18
V5998 921G>T synonymous_variant ORF1ab_pp1a A307A 1.00e+0 BA.1.18
V6010 999G>T synonymous_variant ORF1ab_pp1a T333T 6.32e-1 BA.1.18
V61 -68G>T upstream_gene_variant ORF1ab_pp1a None 7.07e-1 BA.1.18
V6121 1830G>T synonymous_variant ORF1ab_pp1a S610S 1.00e+0 BA.1.18
V6165 2133G>T synonymous_variant ORF1ab_pp1a T711T 1.00e+0 BA.1.18
V643 1933G>T missense_variant ORF1ab_pp1a G645C 1.00e+0 BA.1.18
V657 1981G>T missense_variant ORF1ab_pp1a G661C 1.00e+0 BA.1.18
V6634 5592G>T synonymous_variant ORF1ab_pp1a T1864T 1.00e+0 BA.1.18
V6686 6006G>T synonymous_variant ORF1ab_pp1a T2002T 1.00e+0 BA.1.18
V6704 6099G>T synonymous_variant ORF1ab_pp1a A2033A 1.00e+0 BA.1.18
V6765 6585G>T synonymous_variant ORF1ab_pp1a P2195P 1.00e+0 BA.1.18
V69 -62G>T upstream_gene_variant ORF1ab_pp1a None 8.16e-1 BA.1.18
V6908 7791G>T synonymous_variant ORF1ab_pp1a T2597T 1.00e+0 BA.1.18
V6950 8088G>T synonymous_variant ORF1ab_pp1a A2696A 1.00e+0 BA.1.18
V6952 8103G>T synonymous_variant ORF1ab_pp1a A2701A 1.00e+0 BA.1.18
V7140 9606G>T synonymous_variant ORF1ab_pp1a T3202T 1.00e+0 BA.1.18
V72 -58G>T upstream_gene_variant ORF1ab_pp1a None 1.00e+0 BA.1.18
V747 2359G>T missense_variant ORF1ab_pp1a G787W 1.00e+0 BA.1.18
V7502 12504G>T synonymous_variant ORF1ab_pp1a A4168A 6.32e-1 BA.1.18
V752 2374G>T stop_gained ORF1ab_pp1a E792* 1.00e+0 BA.1.18
V7559 12936G>T synonymous_variant ORF1ab_pp1a P4312P 7.07e-1 BA.1.18
V7567 12975G>T synonymous_variant ORF1ab_pp1a S4325S 1.00e+0 BA.1.18
V7602 13194G>T synonymous_variant ORF1ab_pp1a S4398S 1.00e+0 BA.1.18
V7604 13239G>T synonymous_variant ORF1ab_pp1ab P4413P 1.00e+0 BA.1.18
V762 2452G>T missense_variant ORF1ab_pp1a G818C 1.00e+0 BA.1.18
V7699 14004G>T synonymous_variant ORF1ab_pp1ab T4668T 1.00e+0 BA.1.18
V7751 14358G>T synonymous_variant ORF1ab_pp1ab T4786T 1.00e+0 BA.1.18
V782 2593G>T missense_variant ORF1ab_pp1a G865C 1.00e+0 BA.1.18
V7869 15279G>T synonymous_variant ORF1ab_pp1ab T5093T 8.16e-1 BA.1.18
V787 2614G>T missense_variant ORF1ab_pp1a A872S 8.16e-1 BA.1.18
V7951 15957G>T synonymous_variant ORF1ab_pp1ab P5319P 1.00e+0 BA.1.18
V8101 17070G>T synonymous_variant ORF1ab_pp1ab T5690T 6.32e-1 BA.1.18
V8145 17415G>T synonymous_variant ORF1ab_pp1ab T5805T 6.32e-1 BA.1.18
V8296 18492G>T synonymous_variant ORF1ab_pp1ab P6164P 6.32e-1 BA.1.18
V8328 18696G>T synonymous_variant ORF1ab_pp1ab A6232A 8.16e-1 BA.1.18
V8388 19191G>T synonymous_variant ORF1ab_pp1ab T6397T 1.00e+0 BA.1.18
V8502 20205G>T synonymous_variant ORF1ab_pp1ab A6735A 1.00e+0 BA.1.18
V8519 20406G>T synonymous_variant ORF1ab_pp1ab A6802A 1.00e+0 BA.1.18
V8547 20667G>T synonymous_variant ORF1ab_pp1ab T6889T 7.07e-1 BA.1.18
V8549 20673G>T synonymous_variant ORF1ab_pp1ab T6891T 1.00e+0 BA.1.18
V8711 624G>T synonymous_variant S T208T 8.16e-1 BA.1.18
V882 2977G>T missense_variant ORF1ab_pp1a G993C 1.00e+0 BA.1.18
V8973 2637G>T synonymous_variant S A879A 8.16e-1 BA.1.18
V9003 2883G>T synonymous_variant S T961T 1.00e+0 BA.1.18
V9151 102G>T synonymous_variant ORF3a T34T 6.32e-1 BA.1.18
V9154 108G>T synonymous_variant ORF3a P36P 8.16e-1 BA.1.18
V9253 801G>T synonymous_variant ORF3a P267P 1.00e+0 BA.1.18
V9254 804G>T synonymous_variant ORF3a T268T 8.16e-1 BA.1.18
V9256 807G>T synonymous_variant ORF3a T269T 8.16e-1 BA.1.18
V9262 18G>T synonymous_variant E S6S 1.00e+0 BA.1.18
V9274 108G>T synonymous_variant E A36A 8.16e-1 BA.1.18
V9330 312G>T synonymous_variant M A104A 6.32e-1 BA.1.18
V9332 318G>T synonymous_variant M T106T 7.07e-1 BA.1.18
V9480 315G>T synonymous_variant ORF7a A105A 8.16e-1 BA.1.18
V9550 309G>T synonymous_variant ORF8 S103S 8.16e-1 BA.1.18
V9596 150G>T synonymous_variant N A50A 6.32e-1 BA.1.18
V9753 939G>T synonymous_variant N A313A 6.32e-1 BA.1.18
V978 3319G>T stop_gained ORF1ab_pp1a G1107* 1.00e+0 BA.1.18
V9824 30G>T synonymous_variant ORF10 P10P 1.00e+0 BA.1.18
V9825 36G>T synonymous_variant ORF10 T12T 1.00e+0 BA.1.18
V988 3355G>T missense_variant ORF1ab_pp1a G1119C 1.00e+0 BA.1.18
V1002 3424G>T stop_gained ORF1ab_pp1a E1142* 9.72e-1 AY.125
V1026 3509G>T missense_variant ORF1ab_pp1a R1170L 9.72e-1 AY.125
V103 -20G>T upstream_gene_variant ORF1ab_pp1a None 9.72e-1 AY.125
V1047 3610G>T missense_variant ORF1ab_pp1a A1204S 9.72e-1 AY.125
V11 -194G>T upstream_gene_variant ORF1ab_pp1a None 9.09e-1 AY.125
V111 -10G>T upstream_gene_variant ORF1ab_pp1a None 8.79e-1 AY.125
V1133 4127G>T missense_variant ORF1ab_pp1a R1376L 9.72e-1 AY.125
V1139 4157G>T missense_variant ORF1ab_pp1a R1386L 9.72e-1 AY.125
V1146 4211G>T missense_variant ORF1ab_pp1a R1404L 9.72e-1 AY.125
V1159 4318G>T missense_variant ORF1ab_pp1a D1440Y 9.72e-1 AY.125
V1164 4391G>T missense_variant ORF1ab_pp1a R1464L 9.72e-1 AY.125
V118 28G>T stop_gained ORF1ab_pp1a E10* 9.72e-1 AY.125
V120 40G>T missense_variant ORF1ab_pp1a V14F 9.72e-1 AY.125
V124 71G>T missense_variant ORF1ab_pp1a R24L 9.72e-1 AY.125
V125 73G>T missense_variant ORF1ab_pp1a D25Y 9.46e-1 AY.125
V1252 4883G>T missense_variant ORF1ab_pp1a R1628L 9.72e-1 AY.125
V126 76G>T missense_variant ORF1ab_pp1a V26L 9.72e-1 AY.125
V1298 5248G>T missense_variant ORF1ab_pp1a V1750L 9.72e-1 AY.125
V130 82G>T missense_variant ORF1ab_pp1a V28L 9.22e-1 AY.125
V132 86G>T missense_variant ORF1ab_pp1a R29L 9.72e-1 AY.125
V1345 5548G>T missense_variant ORF1ab_pp1a G1850C 9.72e-1 AY.125
V1374 5767G>T missense_variant ORF1ab_pp1a A1923S 1.00e+0 AY.125
V139 103G>T missense_variant ORF1ab_pp1a V35L 9.22e-1 AY.125
V1409 6032G>T missense_variant ORF1ab_pp1a R2011L 9.72e-1 AY.125
V1432 6097G>T missense_variant ORF1ab_pp1a A2033S 9.72e-1 AY.125
V1439 6124G>T stop_gained ORF1ab_pp1a E2042* 9.72e-1 AY.125
V1458 6181G>T missense_variant ORF1ab_pp1a V2061F 7.93e-1 AY.125
V146 128G>T missense_variant ORF1ab_pp1a R43L 9.72e-1 AY.125
V1464 6208G>T stop_gained ORF1ab_pp1a E2070* 9.72e-1 AY.125
V1544 6476G>T missense_variant ORF1ab_pp1a R2159L 8.42e-1 AY.125
V1546 6488G>T missense_variant ORF1ab_pp1a R2163L 9.72e-1 AY.125
V1565 6619G>T missense_variant ORF1ab_pp1a G2207C 9.46e-1 AY.125
V1578 6742G>T missense_variant ORF1ab_pp1a A2248S 9.72e-1 AY.125
V162 178G>T missense_variant ORF1ab_pp1a V60F 9.72e-1 AY.125
V1644 7207G>T missense_variant ORF1ab_pp1a G2403C 9.72e-1 AY.125
V1649 7244G>T missense_variant ORF1ab_pp1a R2415L 9.72e-1 AY.125
V1651 7264G>T stop_gained ORF1ab_pp1a E2422* 9.72e-1 AY.125
V1662 7471G>T missense_variant ORF1ab_pp1a V2491F 9.72e-1 AY.125
V168 218G>T missense_variant ORF1ab_pp1a R73L 9.72e-1 AY.125
V1712 7783G>T missense_variant ORF1ab_pp1a V2595F 9.72e-1 AY.125
V1716 7810G>T missense_variant ORF1ab_pp1a V2604L 9.72e-1 AY.125
V1743 7913G>T missense_variant ORF1ab_pp1a R2638L 9.72e-1 AY.125
V175 230G>T missense_variant ORF1ab_pp1a R77L 9.72e-1 AY.125
V1753 8002G>T missense_variant ORF1ab_pp1a D2668Y 9.72e-1 AY.125
V1760 8057G>T missense_variant ORF1ab_pp1a R2686L 9.72e-1 AY.125
V1766 8090G>T missense_variant ORF1ab_pp1a R2697L 9.72e-1 AY.125
V1774 8143G>T missense_variant ORF1ab_pp1a V2715F 9.72e-1 AY.125
V1777 8177G>T missense_variant ORF1ab_pp1a R2726L 9.72e-1 AY.125
V1778 8189G>T missense_variant ORF1ab_pp1a R2730L 9.72e-1 AY.125
V1819 8453G>T missense_variant ORF1ab_pp1a R2818L 9.72e-1 AY.125
V1829 8522G>T missense_variant ORF1ab_pp1a R2841L 9.72e-1 AY.125
V1846 8596G>T missense_variant ORF1ab_pp1a V2866L 9.72e-1 AY.125
V1857 8624G>T missense_variant ORF1ab_pp1a R2875L 9.72e-1 AY.125
V1883 8846G>T missense_variant ORF1ab_pp1a R2949L 9.72e-1 AY.125
V1886 8858G>T missense_variant ORF1ab_pp1a R2953L 9.72e-1 AY.125
V1900 8959G>T missense_variant ORF1ab_pp1a G2987C 9.72e-1 AY.125
V1961 9491G>T missense_variant ORF1ab_pp1a R3164L 9.72e-1 AY.125
V1964 9581G>T missense_variant ORF1ab_pp1a R3194L 9.72e-1 AY.125
V1979 9703G>T missense_variant ORF1ab_pp1a A3235S 9.72e-1 AY.125
V1993 9874G>T missense_variant ORF1ab_pp1a G3292C 9.72e-1 AY.125
V1997 9892G>T missense_variant ORF1ab_pp1a V3298L 9.72e-1 AY.125
V2005 9968G>T missense_variant ORF1ab_pp1a R3323L 9.72e-1 AY.125
V2030 10103G>T missense_variant ORF1ab_pp1a R3368L 9.72e-1 AY.125
V2055 10417G>T missense_variant ORF1ab_pp1a A3473S 9.72e-1 AY.125
V2060 10454G>T missense_variant ORF1ab_pp1a R3485L 9.72e-1 AY.125
V207 277G>T stop_gained ORF1ab_pp1a E93* 9.72e-1 AY.125
V2079 10570G>T missense_variant ORF1ab_pp1a V3524F 9.72e-1 AY.125
V2087 10625G>T missense_variant ORF1ab_pp1a R3542L 9.46e-1 AY.125
V21 -165G>T upstream_gene_variant ORF1ab_pp1a None 9.41e-1 AY.125
V212 292G>T missense_variant ORF1ab_pp1a G98C 9.46e-1 AY.125
V215 296G>T missense_variant ORF1ab_pp1a R99L 9.46e-1 AY.125
V2151 10985G>T missense_variant ORF1ab_pp1a R3662L 9.72e-1 AY.125
V2238 11405G>T missense_variant ORF1ab_pp1a R3802L 9.72e-1 AY.125
V228 337G>T stop_gained ORF1ab_pp1a E113* 9.41e-1 AY.125
V2310 11978G>T missense_variant ORF1ab_pp1a R3993L 9.72e-1 AY.125
V2313 11996G>T missense_variant ORF1ab_pp1a R3999L 9.72e-1 AY.125
V2358 12449G>T missense_variant ORF1ab_pp1a R4150L 9.72e-1 AY.125
V2362 12469G>T missense_variant ORF1ab_pp1a G4157C 9.72e-1 AY.125
V2386 12559G>T missense_variant ORF1ab_pp1a D4187Y 9.22e-1 AY.125
V239 356G>T missense_variant ORF1ab_pp1a R119L 9.72e-1 AY.125
V2406 12752G>T missense_variant ORF1ab_pp1a R4251L 9.72e-1 AY.125
V2424 12992G>T missense_variant ORF1ab_pp1a R4331L 9.72e-1 AY.125
V243 371G>T missense_variant ORF1ab_pp1a R124L 9.72e-1 AY.125
V2438 13114G>T missense_variant ORF1ab_pp1a V4372F 9.72e-1 AY.125
V2439 13120G>T missense_variant ORF1ab_pp1a G4374C 9.22e-1 AY.125
V2445 13160G>T missense_variant ORF1ab_pp1a R4387L 9.72e-1 AY.125
V2446 13162G>T stop_gained ORF1ab_pp1a E4388* 9.72e-1 AY.125
V245 379G>T missense_variant ORF1ab_pp1a G127C 9.72e-1 AY.125
V2452 13204G>T missense_variant ORF1ab_pp1a G4402W 9.72e-1 AY.125
V2453 13213G>T missense_variant ORF1ab_pp1ab G4405C 9.72e-1 AY.125
V2456 13229G>T missense_variant ORF1ab_pp1ab R4410L 9.72e-1 AY.125
V2459 13243G>T missense_variant ORF1ab_pp1ab G4415C 9.72e-1 AY.125
V2463 13267G>T missense_variant ORF1ab_pp1ab V4423L 9.72e-1 AY.125
V2470 13340G>T missense_variant ORF1ab_pp1ab R4447L 9.72e-1 AY.125
V2474 13357G>T stop_gained ORF1ab_pp1ab E4453* 9.41e-1 AY.125
V2496 13498G>T missense_variant ORF1ab_pp1ab G4500C 9.46e-1 AY.125
V2500 13523G>T missense_variant ORF1ab_pp1ab R4508L 9.72e-1 AY.125
V2503 13529G>T missense_variant ORF1ab_pp1ab R4510L 9.72e-1 AY.125
V2507 13558G>T missense_variant ORF1ab_pp1ab V4520F 9.72e-1 AY.125
V251 409G>T missense_variant ORF1ab_pp1a G137C 9.72e-1 AY.125
V2528 13694G>T missense_variant ORF1ab_pp1ab R4565L 9.72e-1 AY.125
V2529 13696G>T missense_variant ORF1ab_pp1ab V4566L 9.72e-1 AY.125
V2532 13702G>T missense_variant ORF1ab_pp1ab A4568S 9.72e-1 AY.125
V2534 13718G>T missense_variant ORF1ab_pp1ab R4573L 9.72e-1 AY.125
V2535 13724G>T missense_variant ORF1ab_pp1ab R4575L 9.72e-1 AY.125
V2540 13766G>T missense_variant ORF1ab_pp1ab R4589L 9.46e-1 AY.125
V2543 13834G>T missense_variant ORF1ab_pp1ab G4612C 9.72e-1 AY.125
V255 412G>T missense_variant ORF1ab_pp1a A138S 9.41e-1 AY.125
V257 415G>T missense_variant ORF1ab_pp1a D139Y 9.72e-1 AY.125
V2584 14030G>T missense_variant ORF1ab_pp1ab R4677L 9.72e-1 AY.125
V2612 14320G>T missense_variant ORF1ab_pp1ab A4774S 9.72e-1 AY.125
V2615 14351G>T missense_variant ORF1ab_pp1ab R4784L 9.72e-1 AY.125
V2620 14413G>T missense_variant ORF1ab_pp1ab G4805C 9.72e-1 AY.125
V2631 14530G>T missense_variant ORF1ab_pp1ab D4844Y 9.72e-1 AY.125
V2632 14546G>T missense_variant ORF1ab_pp1ab R4849L 9.72e-1 AY.125
V2641 14659G>T missense_variant ORF1ab_pp1ab V4887F 9.72e-1 AY.125
V2652 14761G>T missense_variant ORF1ab_pp1ab A4921S 9.72e-1 AY.125
V2654 14774G>T missense_variant ORF1ab_pp1ab R4925L 9.72e-1 AY.125
V2656 14840G>T missense_variant ORF1ab_pp1ab R4947L 9.72e-1 AY.125
V2657 14845G>T missense_variant ORF1ab_pp1ab V4949L 9.72e-1 AY.125
V2660 14917G>T missense_variant ORF1ab_pp1ab A4973S 6.44e-1 AY.125
V2680 15095G>T missense_variant ORF1ab_pp1ab R5032L 9.72e-1 AY.125
V2687 15128G>T missense_variant ORF1ab_pp1ab R5043L 9.72e-1 AY.125
V269 439G>T missense_variant ORF1ab_pp1a D147Y 9.72e-1 AY.125
V270 442G>T stop_gained ORF1ab_pp1a E148* 9.72e-1 AY.125
V2702 15325G>T missense_variant ORF1ab_pp1ab D5109Y 9.72e-1 AY.125
V2706 15338G>T missense_variant ORF1ab_pp1ab R5113L 9.72e-1 AY.125
V2715 15415G>T missense_variant ORF1ab_pp1ab A5139S 9.72e-1 AY.125
V2716 15425G>T missense_variant ORF1ab_pp1ab R5142L 9.72e-1 AY.125
V2719 15457G>T missense_variant ORF1ab_pp1ab D5153Y 9.72e-1 AY.125
V2743 15697G>T missense_variant ORF1ab_pp1ab G5233C 9.72e-1 AY.125
V2745 15718G>T missense_variant ORF1ab_pp1ab V5240L 7.93e-1 AY.125
V2746 15749G>T missense_variant ORF1ab_pp1ab R5250L 9.72e-1 AY.125
V2747 15754G>T missense_variant ORF1ab_pp1ab V5252L 9.72e-1 AY.125
V2772 16034G>T missense_variant ORF1ab_pp1ab R5345L 9.72e-1 AY.125
V2796 16273G>T missense_variant ORF1ab_pp1ab D5425Y 9.72e-1 AY.125
V2812 16436G>T missense_variant ORF1ab_pp1ab R5479L 9.72e-1 AY.125
V2822 16505G>T missense_variant ORF1ab_pp1ab R5502L 9.72e-1 AY.125
V2823 16529G>T missense_variant ORF1ab_pp1ab R5510L 9.72e-1 AY.125
V2834 16607G>T missense_variant ORF1ab_pp1ab R5536L 9.72e-1 AY.125
V285 512G>T missense_variant ORF1ab_pp1a R171L 9.72e-1 AY.125
V287 524G>T missense_variant ORF1ab_pp1a R175L 9.72e-1 AY.125
V2880 16880G>T missense_variant ORF1ab_pp1ab R5627L 9.72e-1 AY.125
V2884 16909G>T missense_variant ORF1ab_pp1ab A5637S 9.72e-1 AY.125
V289 535G>T stop_gained ORF1ab_pp1a G179* 9.72e-1 AY.125
V2894 16982G>T missense_variant ORF1ab_pp1ab R5661L 9.72e-1 AY.125
V2896 16988G>T missense_variant ORF1ab_pp1ab R5663L 9.72e-1 AY.125
V29 -142G>T upstream_gene_variant ORF1ab_pp1a None 9.15e-1 AY.125
V2919 17173G>T missense_variant ORF1ab_pp1ab D5725Y 9.72e-1 AY.125
V2923 17198G>T missense_variant ORF1ab_pp1ab R5733L 9.72e-1 AY.125
V2933 17287G>T stop_gained ORF1ab_pp1ab G5763* 9.72e-1 AY.125
V2935 17297G>T missense_variant ORF1ab_pp1ab R5766L 9.72e-1 AY.125
V2936 17300G>T missense_variant ORF1ab_pp1ab R5767L 9.72e-1 AY.125
V2956 17455G>T missense_variant ORF1ab_pp1ab V5819L 9.72e-1 AY.125
V296 551G>T missense_variant ORF1ab_pp1a R184L 9.72e-1 AY.125
V2960 17477G>T missense_variant ORF1ab_pp1ab R5826L 9.72e-1 AY.125
V297 559G>T missense_variant ORF1ab_pp1a D187Y 9.72e-1 AY.125
V2992 17753G>T missense_variant ORF1ab_pp1ab R5918L 9.72e-1 AY.125
V3039 18002G>T missense_variant ORF1ab_pp1ab R6001L 9.72e-1 AY.125
V3040 18004G>T stop_gained ORF1ab_pp1ab E6002* 9.72e-1 AY.125
V3045 18026G>T missense_variant ORF1ab_pp1ab R6009L 9.72e-1 AY.125
V3048 18043G>T missense_variant ORF1ab_pp1ab D6015Y 9.72e-1 AY.125
V3049 18049G>T stop_gained ORF1ab_pp1ab E6017* 9.72e-1 AY.125
V3085 18263G>T missense_variant ORF1ab_pp1ab R6088L 9.72e-1 AY.125
V3102 18389G>T missense_variant ORF1ab_pp1ab R6130L 9.72e-1 AY.125
V3105 18413G>T missense_variant ORF1ab_pp1ab R6138L 9.72e-1 AY.125
V311 620G>T missense_variant ORF1ab_pp1a R207L 9.22e-1 AY.125
V3115 18481G>T missense_variant ORF1ab_pp1ab V6161F 9.72e-1 AY.125
V3130 18625G>T stop_gained ORF1ab_pp1ab E6209* 9.72e-1 AY.125
V3135 18641G>T missense_variant ORF1ab_pp1ab R6214L 9.72e-1 AY.125
V3187 18943G>T missense_variant ORF1ab_pp1ab D6315Y 8.77e-1 AY.125
V321 649G>T stop_gained ORF1ab_pp1a E217* 9.72e-1 AY.125
V3254 19538G>T missense_variant ORF1ab_pp1ab R6513L 9.72e-1 AY.125
V3293 19769G>T missense_variant ORF1ab_pp1ab R6590L 9.46e-1 AY.125
V3310 19870G>T missense_variant ORF1ab_pp1ab V6624L 7.18e-1 AY.125
V332 695G>T missense_variant ORF1ab_pp1a R232L 7.07e-1 AY.125
V3331 20027G>T missense_variant ORF1ab_pp1ab R6676L 9.72e-1 AY.125
V3334 20053G>T stop_gained ORF1ab_pp1ab E6685* 9.72e-1 AY.125
V3338 20062G>T missense_variant ORF1ab_pp1ab V6688F 9.72e-1 AY.125
V3345 20126G>T missense_variant ORF1ab_pp1ab R6709L 9.46e-1 AY.125
V336 731G>T missense_variant ORF1ab_pp1a R244L 9.72e-1 AY.125
V3415 20527G>T missense_variant ORF1ab_pp1ab A6843S 9.72e-1 AY.125
V3428 20683G>T missense_variant ORF1ab_pp1ab D6895Y 9.72e-1 AY.125
V3444 20791G>T missense_variant ORF1ab_pp1ab D6931Y 9.72e-1 AY.125
V3462 20893G>T missense_variant ORF1ab_pp1ab V6965L 9.15e-1 AY.125
V3487 21041G>T missense_variant ORF1ab_pp1ab R7014L 9.41e-1 AY.125
V3488 21043G>T stop_gained ORF1ab_pp1ab E7015* 9.41e-1 AY.125
V3517 -5G>T upstream_gene_variant S None 9.41e-1 AY.125
V3562 101G>T missense_variant S R34L 8.82e-1 AY.125
V3621 367G>T missense_variant S A123S 9.39e-1 AY.125
V370 902G>T missense_variant ORF1ab_pp1a R301L 8.60e-1 AY.125
V38 -114G>T upstream_gene_variant ORF1ab_pp1a None 9.72e-1 AY.125
V3822 1030G>T missense_variant S A344S 8.27e-1 AY.125
V3857 1231G>T missense_variant S A411S 9.46e-1 AY.125
V3959 1730G>T missense_variant S R577L 9.72e-1 AY.125
V396 1003G>T missense_variant ORF1ab_pp1a D335Y 9.72e-1 AY.125
V3985 1901G>T missense_variant S R634L 9.72e-1 AY.125
V3991 1937G>T missense_variant S R646L 9.72e-1 AY.125
V4005 2014G>T missense_variant S A672S 9.72e-1 AY.125
V401 1024G>T stop_gained ORF1ab_pp1a E342* 9.72e-1 AY.125
V4024 2042C>T missense_variant S P681L 6.78e-1 AY.125
V4025 2045G>T missense_variant S R682L 9.22e-1 AY.125
V4026 2048G>T missense_variant S R683L 8.79e-1 AY.125
V4029 2054G>T missense_variant S R685L 9.72e-1 AY.125
V4065 2294G>T missense_variant S R765L 9.00e-1 AY.125
V41 -101G>T upstream_gene_variant ORF1ab_pp1a None 9.72e-1 AY.125
V4109 2569G>T missense_variant S G857C 9.72e-1 AY.125
V4150 2948G>T missense_variant S R983L 9.72e-1 AY.125
V4185 3272G>T missense_variant S R1091L 9.22e-1 AY.125
V4235 3554G>T missense_variant S R1185L 9.72e-1 AY.125
V4244 3595G>T missense_variant S D1199Y 9.00e-1 AY.125
V4289 3778G>T missense_variant S D1260Y 8.25e-1 AY.125
V4302 -6G>T upstream_gene_variant ORF3a None 9.72e-1 AY.125
V4345 89G>T missense_variant ORF3a R30L 9.46e-1 AY.125
V437 1156G>T stop_gained ORF1ab_pp1a E386* 9.72e-1 AY.125
V4379 130G>T stop_gained ORF3a G44* 9.41e-1 AY.125
V4391 148G>T missense_variant ORF3a V50F 8.60e-1 AY.125
V4410 175G>T missense_variant ORF3a A59S 9.00e-1 AY.125
V4459 289G>T missense_variant ORF3a V97F 9.22e-1 AY.125
V446 1193G>T missense_variant ORF1ab_pp1a R398L 9.72e-1 AY.125
V4512 401G>T missense_variant ORF3a R134L 7.29e-1 AY.125
V453 1205G>T missense_variant ORF1ab_pp1a R402L 9.46e-1 AY.125
V4614 751G>T missense_variant ORF3a G251C 9.22e-1 AY.125
V4620 760G>T stop_gained ORF3a G254* 8.79e-1 AY.125
V464 1277G>T missense_variant ORF1ab_pp1a R426L 8.79e-1 AY.125
V4652 817G>T missense_variant ORF3a V273L 8.60e-1 AY.125
V4672 70G>T missense_variant E V24L 9.72e-1 AY.125
V4678 145G>T missense_variant E V49L 7.53e-1 AY.125
V4686 182G>T missense_variant E R61L 9.46e-1 AY.125
V469 1285G>T missense_variant ORF1ab_pp1a A429S 9.72e-1 AY.125
V4722 16G>T missense_variant M G6C 8.60e-1 AY.125
V4757 232G>T missense_variant M G78C 7.29e-1 AY.125
V4763 247G>T missense_variant M A83S 9.22e-1 AY.125
V4772 320G>T missense_variant M R107L 9.46e-1 AY.125
V4782 473G>T missense_variant M R158L 9.72e-1 AY.125
V4784 521G>T missense_variant M R174L 9.22e-1 AY.125
V4788 593G>T missense_variant M R198L 9.72e-1 AY.125
V48 -92G>T upstream_gene_variant ORF1ab_pp1a None 6.08e-1 AY.125
V4800 13G>T missense_variant ORF6 V5F 9.22e-1 AY.125
V484 1330G>T stop_gained ORF1ab_pp1a E444* 9.41e-1 AY.125
V4844 -4G>T upstream_gene_variant ORF7a None 7.53e-1 AY.125
V4864 37G>T missense_variant ORF7a A13S 9.72e-1 AY.125
V4895 121G>T stop_gained ORF7a E41* 9.72e-1 AY.125
V4930 208G>T missense_variant ORF7a G70C 9.72e-1 AY.125
V4932 211G>T missense_variant ORF7a V71L 9.46e-1 AY.125
V4937 220G>T missense_variant ORF7a V74F 8.79e-1 AY.125
V4943 233G>T missense_variant ORF7a R78L 9.22e-1 AY.125
V5056 127G>T missense_variant ORF7b A43S 9.72e-1 AY.125
V5061 -4G>T upstream_gene_variant ORF8 None 9.72e-1 AY.125
V511 1420G>T missense_variant ORF1ab_pp1a A474S 9.09e-1 AY.125
V5144 184G>T missense_variant ORF8 V62L 7.18e-1 AY.125
V5173 223G>T missense_variant ORF8 D75Y 9.72e-1 AY.125
V5176 229G>T missense_variant ORF8 G77C 9.22e-1 AY.125
V5196 302G>T missense_variant ORF8 R101L 8.42e-1 AY.125
V5209 340G>T missense_variant ORF8 V114F 9.46e-1 AY.125
V5212 344G>T missense_variant ORF8 R115L 9.46e-1 AY.125
V5234 -12G>T upstream_gene_variant N None 9.72e-1 AY.125
V5266 29G>T missense_variant N R10L 9.72e-1 AY.125
V5277 41G>T missense_variant N R14L 7.93e-1 AY.125
V5324 107G>T missense_variant N R36L 9.72e-1 AY.125
V5331 119G>T missense_variant N R40L 9.22e-1 AY.125
V5333 122G>T missense_variant N R41L 8.90e-1 AY.125
V5337 163G>T missense_variant N A55S 8.42e-1 AY.125
V5345 203G>T missense_variant N R68L 9.22e-1 AY.125
V5349 214G>T missense_variant N V72F 9.72e-1 AY.125
V5355 263G>T missense_variant N R88L 9.72e-1 AY.125
V5359 278G>T missense_variant N R93L 9.72e-1 AY.125
V5361 284G>T missense_variant N R95L 9.72e-1 AY.125
V5364 295G>T missense_variant N G99C 9.72e-1 AY.125
V5379 385G>T missense_variant N G129C 9.72e-1 AY.125
V5395 446G>T missense_variant N R149L 9.72e-1 AY.125
V5404 472G>T missense_variant N V158L 9.72e-1 AY.125
V5414 517G>T missense_variant N A173S 8.08e-1 AY.125
V5419 535G>T missense_variant N G179C 9.72e-1 AY.125
V5429 554G>T missense_variant N R185L 9.72e-1 AY.125
V5434 566G>T missense_variant N R189L 9.72e-1 AY.125
V5437 572G>T missense_variant N R191L 9.46e-1 AY.125
V5536 776G>T missense_variant N R259L 9.72e-1 AY.125
V5537 785G>T missense_variant N R262L 9.72e-1 AY.125
V554 1625G>T missense_variant ORF1ab_pp1a R542L 9.46e-1 AY.125
V5546 823G>T missense_variant N G275C 9.46e-1 AY.125
V5547 830G>T missense_variant N R277L 9.72e-1 AY.125
V556 1634G>T missense_variant ORF1ab_pp1a R545L 9.72e-1 AY.125
V5565 931G>T missense_variant N A311S 7.53e-1 AY.125
V5566 946G>T stop_gained N G316* 9.72e-1 AY.125
V5570 956G>T missense_variant N R319L 9.72e-1 AY.125
V5594 1075G>T missense_variant N A359S 8.60e-1 AY.125
V563 1649G>T missense_variant ORF1ab_pp1a R550L 9.72e-1 AY.125
V5688 16G>T missense_variant ORF10 V6F 9.72e-1 AY.125
V5690 22G>T missense_variant ORF10 A8S 9.46e-1 AY.125
V5708 71G>T missense_variant ORF10 R24L 9.00e-1 AY.125
V574 1679G>T missense_variant ORF1ab_pp1a R560L 9.72e-1 AY.125
V5762 *4350G>T downstream_gene_variant S None 6.97e-1 AY.125
V5781 *4360G>T downstream_gene_variant S None 9.46e-1 AY.125
V5790 *4367G>T downstream_gene_variant S None 6.44e-1 AY.125
V5794 *4371G>T downstream_gene_variant S None 8.25e-1 AY.125
V581 1696G>T missense_variant ORF1ab_pp1a A566S 9.72e-1 AY.125
V5875 222G>T synonymous_variant ORF1ab_pp1a S74S 6.78e-1 AY.125
V5970 726G>T synonymous_variant ORF1ab_pp1a T242T 9.72e-1 AY.125
V5998 921G>T synonymous_variant ORF1ab_pp1a A307A 8.25e-1 AY.125
V6010 999G>T synonymous_variant ORF1ab_pp1a T333T 9.22e-1 AY.125
V6121 1830G>T synonymous_variant ORF1ab_pp1a S610S 9.72e-1 AY.125
V6165 2133G>T synonymous_variant ORF1ab_pp1a T711T 9.72e-1 AY.125
V631 1879G>T missense_variant ORF1ab_pp1a V627F 9.22e-1 AY.125
V6413 3942G>T synonymous_variant ORF1ab_pp1a A1314A 7.93e-1 AY.125
V6420 3990G>T synonymous_variant ORF1ab_pp1a P1330P 8.42e-1 AY.125
V643 1933G>T missense_variant ORF1ab_pp1a G645C 8.42e-1 AY.125
V6521 4743G>T synonymous_variant ORF1ab_pp1a T1581T 9.41e-1 AY.125
V657 1981G>T missense_variant ORF1ab_pp1a G661C 9.72e-1 AY.125
V6634 5592G>T synonymous_variant ORF1ab_pp1a T1864T 9.72e-1 AY.125
V6686 6006G>T synonymous_variant ORF1ab_pp1a T2002T 9.72e-1 AY.125
V6704 6099G>T synonymous_variant ORF1ab_pp1a A2033A 9.72e-1 AY.125
V6765 6585G>T synonymous_variant ORF1ab_pp1a P2195P 9.72e-1 AY.125
V6830 7128G>T synonymous_variant ORF1ab_pp1a P2376P 6.44e-1 AY.125
V6859 7410G>T synonymous_variant ORF1ab_pp1a A2470A 7.79e-1 AY.125
V6890 7671G>T synonymous_variant ORF1ab_pp1a A2557A 8.60e-1 AY.125
V69 -62G>T upstream_gene_variant ORF1ab_pp1a None 9.46e-1 AY.125
V6900 7752G>T synonymous_variant ORF1ab_pp1a A2584A 9.22e-1 AY.125
V6908 7791G>T synonymous_variant ORF1ab_pp1a T2597T 9.72e-1 AY.125
V6950 8088G>T synonymous_variant ORF1ab_pp1a A2696A 6.87e-1 AY.125
V6952 8103G>T synonymous_variant ORF1ab_pp1a A2701A 8.60e-1 AY.125
V7125 9537G>T synonymous_variant ORF1ab_pp1a A3179A 8.79e-1 AY.125
V7140 9606G>T synonymous_variant ORF1ab_pp1a T3202T 9.72e-1 AY.125
V72 -58G>T upstream_gene_variant ORF1ab_pp1a None 9.46e-1 AY.125
V7246 10377G>T synonymous_variant ORF1ab_pp1a T3459T 6.69e-1 AY.125
V747 2359G>T missense_variant ORF1ab_pp1a G787W 9.72e-1 AY.125
V7480 12249G>T synonymous_variant ORF1ab_pp1a T4083T 8.42e-1 AY.125
V7502 12504G>T synonymous_variant ORF1ab_pp1a A4168A 9.46e-1 AY.125
V752 2374G>T stop_gained ORF1ab_pp1a E792* 9.72e-1 AY.125
V7559 12936G>T synonymous_variant ORF1ab_pp1a P4312P 8.60e-1 AY.125
V7567 12975G>T synonymous_variant ORF1ab_pp1a S4325S 9.72e-1 AY.125
V7602 13194G>T synonymous_variant ORF1ab_pp1a S4398S 9.00e-1 AY.125
V7604 13239G>T synonymous_variant ORF1ab_pp1ab P4413P 9.72e-1 AY.125
V762 2452G>T missense_variant ORF1ab_pp1a G818C 9.72e-1 AY.125
V7677 13854G>T synonymous_variant ORF1ab_pp1ab T4618T 9.22e-1 AY.125
V7699 14004G>T synonymous_variant ORF1ab_pp1ab T4668T 9.72e-1 AY.125
V7751 14358G>T synonymous_variant ORF1ab_pp1ab T4786T 9.00e-1 AY.125
V782 2593G>T missense_variant ORF1ab_pp1a G865C 9.72e-1 AY.125
V7869 15279G>T synonymous_variant ORF1ab_pp1ab T5093T 8.08e-1 AY.125
V787 2614G>T missense_variant ORF1ab_pp1a A872S 9.72e-1 AY.125
V7951 15957G>T synonymous_variant ORF1ab_pp1ab P5319P 9.72e-1 AY.125
V7974 16113G>T synonymous_variant ORF1ab_pp1ab P5371P 7.65e-1 AY.125
V8011 16383G>T synonymous_variant ORF1ab_pp1ab T5461T 9.00e-1 AY.125
V8101 17070G>T synonymous_variant ORF1ab_pp1ab T5690T 9.46e-1 AY.125
V8252 18198G>T synonymous_variant ORF1ab_pp1ab P6066P 9.72e-1 AY.125
V8296 18492G>T synonymous_variant ORF1ab_pp1ab P6164P 8.42e-1 AY.125
V8328 18696G>T synonymous_variant ORF1ab_pp1ab A6232A 9.22e-1 AY.125
V8446 19698G>T synonymous_variant ORF1ab_pp1ab T6566T 8.25e-1 AY.125
V8502 20205G>T synonymous_variant ORF1ab_pp1ab A6735A 9.72e-1 AY.125
V8519 20406G>T synonymous_variant ORF1ab_pp1ab A6802A 9.72e-1 AY.125
V8521 20415G>T synonymous_variant ORF1ab_pp1ab P6805P 7.65e-1 AY.125
V8547 20667G>T synonymous_variant ORF1ab_pp1ab T6889T 9.72e-1 AY.125
V8549 20673G>T synonymous_variant ORF1ab_pp1ab T6891T 8.79e-1 AY.125
V8592 20991G>T synonymous_variant ORF1ab_pp1ab A6997A 7.76e-1 AY.125
V8678 336G>T synonymous_variant S S112S 9.39e-1 AY.125
V8698 489G>T synonymous_variant S A163A 7.58e-1 AY.125
V8711 624G>T synonymous_variant S T208T 8.57e-1 AY.125
V8721 663G>T synonymous_variant S S221S 6.53e-1 AY.125
V8749 906G>T synonymous_variant S T302T 6.24e-1 AY.125
V8973 2637G>T synonymous_variant S A879A 7.29e-1 AY.125
V9003 2883G>T synonymous_variant S T961T 9.22e-1 AY.125
V9154 108G>T synonymous_variant ORF3a P36P 9.46e-1 AY.125
V9253 801G>T synonymous_variant ORF3a P267P 9.46e-1 AY.125
V9254 804G>T synonymous_variant ORF3a T268T 8.42e-1 AY.125
V9256 807G>T synonymous_variant ORF3a T269T 9.72e-1 AY.125
V9262 18G>T synonymous_variant E S6S 9.46e-1 AY.125
V9274 108G>T synonymous_variant E A36A 9.72e-1 AY.125
V9330 312G>T synonymous_variant M A104A 7.29e-1 AY.125
V9351 396G>T synonymous_variant M P132P 9.00e-1 AY.125
V9376 525G>T synonymous_variant M T175T 9.72e-1 AY.125
V9381 552G>T synonymous_variant M S184S 9.00e-1 AY.125
V9480 315G>T synonymous_variant ORF7a A105A 9.72e-1 AY.125
V9523 108G>T synonymous_variant ORF8 P36P 7.93e-1 AY.125
V9550 309G>T synonymous_variant ORF8 S103S 9.72e-1 AY.125
V9568 48G>T synonymous_variant N T16T 8.42e-1 AY.125
V9582 105G>T synonymous_variant N A35A 6.21e-1 AY.125
V9596 150G>T synonymous_variant N A50A 9.72e-1 AY.125
V9744 906G>T synonymous_variant N P302P 6.21e-1 AY.125
V9753 939G>T synonymous_variant N A313A 7.79e-1 AY.125
V9758 954G>T synonymous_variant N S318S 6.97e-1 AY.125
V978 3319G>T stop_gained ORF1ab_pp1a G1107* 9.72e-1 AY.125
V9797 1149G>T synonymous_variant N P383P 6.36e-1 AY.125
V9824 30G>T synonymous_variant ORF10 P10P 9.00e-1 AY.125
V9825 36G>T synonymous_variant ORF10 T12T 9.72e-1 AY.125
V988 3355G>T missense_variant ORF1ab_pp1a G1119C 9.00e-1 AY.125
V1002 3424G>T stop_gained ORF1ab_pp1a E1142* 1.00e+0 AY.9.2
V1026 3509G>T missense_variant ORF1ab_pp1a R1170L 1.00e+0 AY.9.2
V103 -20G>T upstream_gene_variant ORF1ab_pp1a None 9.35e-1 AY.9.2
V1047 3610G>T missense_variant ORF1ab_pp1a A1204S 8.37e-1 AY.9.2
V11 -194G>T upstream_gene_variant ORF1ab_pp1a None 8.45e-1 AY.9.2
V111 -10G>T upstream_gene_variant ORF1ab_pp1a None 1.00e+0 AY.9.2
V1133 4127G>T missense_variant ORF1ab_pp1a R1376L 1.00e+0 AY.9.2
V1139 4157G>T missense_variant ORF1ab_pp1a R1386L 1.00e+0 AY.9.2
V1146 4211G>T missense_variant ORF1ab_pp1a R1404L 6.83e-1 AY.9.2
V1159 4318G>T missense_variant ORF1ab_pp1a D1440Y 9.26e-1 AY.9.2
V1164 4391G>T missense_variant ORF1ab_pp1a R1464L 1.00e+0 AY.9.2
V118 28G>T stop_gained ORF1ab_pp1a E10* 1.00e+0 AY.9.2
V120 40G>T missense_variant ORF1ab_pp1a V14F 1.00e+0 AY.9.2
V124 71G>T missense_variant ORF1ab_pp1a R24L 1.00e+0 AY.9.2
V125 73G>T missense_variant ORF1ab_pp1a D25Y 1.00e+0 AY.9.2
V1252 4883G>T missense_variant ORF1ab_pp1a R1628L 1.00e+0 AY.9.2
V126 76G>T missense_variant ORF1ab_pp1a V26L 1.00e+0 AY.9.2
V1298 5248G>T missense_variant ORF1ab_pp1a V1750L 9.26e-1 AY.9.2
V130 82G>T missense_variant ORF1ab_pp1a V28L 1.00e+0 AY.9.2
V132 86G>T missense_variant ORF1ab_pp1a R29L 1.00e+0 AY.9.2
V1345 5548G>T missense_variant ORF1ab_pp1a G1850C 9.35e-1 AY.9.2
V1374 5767G>T missense_variant ORF1ab_pp1a A1923S 8.82e-1 AY.9.2
V139 103G>T missense_variant ORF1ab_pp1a V35L 7.98e-1 AY.9.2
V1409 6032G>T missense_variant ORF1ab_pp1a R2011L 1.00e+0 AY.9.2
V1432 6097G>T missense_variant ORF1ab_pp1a A2033S 9.35e-1 AY.9.2
V1439 6124G>T stop_gained ORF1ab_pp1a E2042* 1.00e+0 AY.9.2
V146 128G>T missense_variant ORF1ab_pp1a R43L 1.00e+0 AY.9.2
V1464 6208G>T stop_gained ORF1ab_pp1a E2070* 1.00e+0 AY.9.2
V1544 6476G>T missense_variant ORF1ab_pp1a R2159L 1.00e+0 AY.9.2
V1546 6488G>T missense_variant ORF1ab_pp1a R2163L 1.00e+0 AY.9.2
V1565 6619G>T missense_variant ORF1ab_pp1a G2207C 7.64e-1 AY.9.2
V1578 6742G>T missense_variant ORF1ab_pp1a A2248S 1.00e+0 AY.9.2
V162 178G>T missense_variant ORF1ab_pp1a V60F 6.83e-1 AY.9.2
V1644 7207G>T missense_variant ORF1ab_pp1a G2403C 1.00e+0 AY.9.2
V1649 7244G>T missense_variant ORF1ab_pp1a R2415L 1.00e+0 AY.9.2
V1651 7264G>T stop_gained ORF1ab_pp1a E2422* 1.00e+0 AY.9.2
V1662 7471G>T missense_variant ORF1ab_pp1a V2491F 1.00e+0 AY.9.2
V168 218G>T missense_variant ORF1ab_pp1a R73L 1.00e+0 AY.9.2
V1712 7783G>T missense_variant ORF1ab_pp1a V2595F 1.00e+0 AY.9.2
V1716 7810G>T missense_variant ORF1ab_pp1a V2604L 7.98e-1 AY.9.2
V1743 7913G>T missense_variant ORF1ab_pp1a R2638L 1.00e+0 AY.9.2
V175 230G>T missense_variant ORF1ab_pp1a R77L 1.00e+0 AY.9.2
V1753 8002G>T missense_variant ORF1ab_pp1a D2668Y 1.00e+0 AY.9.2
V1760 8057G>T missense_variant ORF1ab_pp1a R2686L 1.00e+0 AY.9.2
V1766 8090G>T missense_variant ORF1ab_pp1a R2697L 1.00e+0 AY.9.2
V1774 8143G>T missense_variant ORF1ab_pp1a V2715F 1.00e+0 AY.9.2
V1777 8177G>T missense_variant ORF1ab_pp1a R2726L 1.00e+0 AY.9.2
V1778 8189G>T missense_variant ORF1ab_pp1a R2730L 1.00e+0 AY.9.2
V1819 8453G>T missense_variant ORF1ab_pp1a R2818L 1.00e+0 AY.9.2
V1829 8522G>T missense_variant ORF1ab_pp1a R2841L 1.00e+0 AY.9.2
V1846 8596G>T missense_variant ORF1ab_pp1a V2866L 9.35e-1 AY.9.2
V1857 8624G>T missense_variant ORF1ab_pp1a R2875L 1.00e+0 AY.9.2
V1883 8846G>T missense_variant ORF1ab_pp1a R2949L 1.00e+0 AY.9.2
V1886 8858G>T missense_variant ORF1ab_pp1a R2953L 1.00e+0 AY.9.2
V1900 8959G>T missense_variant ORF1ab_pp1a G2987C 1.00e+0 AY.9.2
V1961 9491G>T missense_variant ORF1ab_pp1a R3164L 1.00e+0 AY.9.2
V1964 9581G>T missense_variant ORF1ab_pp1a R3194L 1.00e+0 AY.9.2
V1979 9703G>T missense_variant ORF1ab_pp1a A3235S 1.00e+0 AY.9.2
V1993 9874G>T missense_variant ORF1ab_pp1a G3292C 9.26e-1 AY.9.2
V1997 9892G>T missense_variant ORF1ab_pp1a V3298L 7.56e-1 AY.9.2
V2005 9968G>T missense_variant ORF1ab_pp1a R3323L 8.45e-1 AY.9.2
V2030 10103G>T missense_variant ORF1ab_pp1a R3368L 1.00e+0 AY.9.2
V2055 10417G>T missense_variant ORF1ab_pp1a A3473S 1.00e+0 AY.9.2
V2060 10454G>T missense_variant ORF1ab_pp1a R3485L 1.00e+0 AY.9.2
V207 277G>T stop_gained ORF1ab_pp1a E93* 1.00e+0 AY.9.2
V2079 10570G>T missense_variant ORF1ab_pp1a V3524F 1.00e+0 AY.9.2
V2087 10625G>T missense_variant ORF1ab_pp1a R3542L 1.00e+0 AY.9.2
V21 -165G>T upstream_gene_variant ORF1ab_pp1a None 9.26e-1 AY.9.2
V212 292G>T missense_variant ORF1ab_pp1a G98C 1.00e+0 AY.9.2
V215 296G>T missense_variant ORF1ab_pp1a R99L 1.00e+0 AY.9.2
V2151 10985G>T missense_variant ORF1ab_pp1a R3662L 1.00e+0 AY.9.2
V2188 11152G>T missense_variant ORF1ab_pp1a V3718F 9.35e-1 AY.9.2
V2238 11405G>T missense_variant ORF1ab_pp1a R3802L 1.00e+0 AY.9.2
V228 337G>T stop_gained ORF1ab_pp1a E113* 1.00e+0 AY.9.2
V2310 11978G>T missense_variant ORF1ab_pp1a R3993L 7.64e-1 AY.9.2
V2313 11996G>T missense_variant ORF1ab_pp1a R3999L 1.00e+0 AY.9.2
V2358 12449G>T missense_variant ORF1ab_pp1a R4150L 1.00e+0 AY.9.2
V2362 12469G>T missense_variant ORF1ab_pp1a G4157C 1.00e+0 AY.9.2
V2386 12559G>T missense_variant ORF1ab_pp1a D4187Y 9.26e-1 AY.9.2
V239 356G>T missense_variant ORF1ab_pp1a R119L 1.00e+0 AY.9.2
V2406 12752G>T missense_variant ORF1ab_pp1a R4251L 1.00e+0 AY.9.2
V2424 12992G>T missense_variant ORF1ab_pp1a R4331L 1.00e+0 AY.9.2
V243 371G>T missense_variant ORF1ab_pp1a R124L 1.00e+0 AY.9.2
V2438 13114G>T missense_variant ORF1ab_pp1a V4372F 8.45e-1 AY.9.2
V2439 13120G>T missense_variant ORF1ab_pp1a G4374C 8.45e-1 AY.9.2
V2445 13160G>T missense_variant ORF1ab_pp1a R4387L 7.71e-1 AY.9.2
V2446 13162G>T stop_gained ORF1ab_pp1a E4388* 8.45e-1 AY.9.2
V245 379G>T missense_variant ORF1ab_pp1a G127C 1.00e+0 AY.9.2
V2452 13204G>T missense_variant ORF1ab_pp1a G4402W 8.45e-1 AY.9.2
V2453 13213G>T missense_variant ORF1ab_pp1ab G4405C 8.45e-1 AY.9.2
V2456 13229G>T missense_variant ORF1ab_pp1ab R4410L 9.26e-1 AY.9.2
V2459 13243G>T missense_variant ORF1ab_pp1ab G4415C 9.26e-1 AY.9.2
V2463 13267G>T missense_variant ORF1ab_pp1ab V4423L 9.26e-1 AY.9.2
V2470 13340G>T missense_variant ORF1ab_pp1ab R4447L 9.26e-1 AY.9.2
V2496 13498G>T missense_variant ORF1ab_pp1ab G4500C 8.57e-1 AY.9.2
V2500 13523G>T missense_variant ORF1ab_pp1ab R4508L 9.26e-1 AY.9.2
V2503 13529G>T missense_variant ORF1ab_pp1ab R4510L 9.26e-1 AY.9.2
V2507 13558G>T missense_variant ORF1ab_pp1ab V4520F 9.26e-1 AY.9.2
V251 409G>T missense_variant ORF1ab_pp1a G137C 1.00e+0 AY.9.2
V2528 13694G>T missense_variant ORF1ab_pp1ab R4565L 9.26e-1 AY.9.2
V2529 13696G>T missense_variant ORF1ab_pp1ab V4566L 9.26e-1 AY.9.2
V2532 13702G>T missense_variant ORF1ab_pp1ab A4568S 9.26e-1 AY.9.2
V2534 13718G>T missense_variant ORF1ab_pp1ab R4573L 9.26e-1 AY.9.2
V2535 13724G>T missense_variant ORF1ab_pp1ab R4575L 9.26e-1 AY.9.2
V2540 13766G>T missense_variant ORF1ab_pp1ab R4589L 8.57e-1 AY.9.2
V2543 13834G>T missense_variant ORF1ab_pp1ab G4612C 9.26e-1 AY.9.2
V255 412G>T missense_variant ORF1ab_pp1a A138S 1.00e+0 AY.9.2
V257 415G>T missense_variant ORF1ab_pp1a D139Y 1.00e+0 AY.9.2
V2584 14030G>T missense_variant ORF1ab_pp1ab R4677L 9.26e-1 AY.9.2
V2612 14320G>T missense_variant ORF1ab_pp1ab A4774S 1.00e+0 AY.9.2
V2615 14351G>T missense_variant ORF1ab_pp1ab R4784L 1.00e+0 AY.9.2
V2620 14413G>T missense_variant ORF1ab_pp1ab G4805C 1.00e+0 AY.9.2
V2631 14530G>T missense_variant ORF1ab_pp1ab D4844Y 1.00e+0 AY.9.2
V2632 14546G>T missense_variant ORF1ab_pp1ab R4849L 1.00e+0 AY.9.2
V2641 14659G>T missense_variant ORF1ab_pp1ab V4887F 1.00e+0 AY.9.2
V2652 14761G>T missense_variant ORF1ab_pp1ab A4921S 8.37e-1 AY.9.2
V2654 14774G>T missense_variant ORF1ab_pp1ab R4925L 9.35e-1 AY.9.2
V2656 14840G>T missense_variant ORF1ab_pp1ab R4947L 1.00e+0 AY.9.2
V2657 14845G>T missense_variant ORF1ab_pp1ab V4949L 1.00e+0 AY.9.2
V2680 15095G>T missense_variant ORF1ab_pp1ab R5032L 8.45e-1 AY.9.2
V2687 15128G>T missense_variant ORF1ab_pp1ab R5043L 8.45e-1 AY.9.2
V269 439G>T missense_variant ORF1ab_pp1a D147Y 1.00e+0 AY.9.2
V270 442G>T stop_gained ORF1ab_pp1a E148* 1.00e+0 AY.9.2
V2702 15325G>T missense_variant ORF1ab_pp1ab D5109Y 8.45e-1 AY.9.2
V2706 15338G>T missense_variant ORF1ab_pp1ab R5113L 8.45e-1 AY.9.2
V2715 15415G>T missense_variant ORF1ab_pp1ab A5139S 8.02e-1 AY.9.2
V2716 15425G>T missense_variant ORF1ab_pp1ab R5142L 9.26e-1 AY.9.2
V2745 15718G>T missense_variant ORF1ab_pp1ab V5240L 7.17e-1 AY.9.2
V2746 15749G>T missense_variant ORF1ab_pp1ab R5250L 1.00e+0 AY.9.2
V2747 15754G>T missense_variant ORF1ab_pp1ab V5252L 1.00e+0 AY.9.2
V2772 16034G>T missense_variant ORF1ab_pp1ab R5345L 1.00e+0 AY.9.2
V2796 16273G>T missense_variant ORF1ab_pp1ab D5425Y 8.45e-1 AY.9.2
V2822 16505G>T missense_variant ORF1ab_pp1ab R5502L 8.45e-1 AY.9.2
V2823 16529G>T missense_variant ORF1ab_pp1ab R5510L 8.45e-1 AY.9.2
V2834 16607G>T missense_variant ORF1ab_pp1ab R5536L 8.45e-1 AY.9.2
V285 512G>T missense_variant ORF1ab_pp1a R171L 1.00e+0 AY.9.2
V287 524G>T missense_variant ORF1ab_pp1a R175L 1.00e+0 AY.9.2
V2880 16880G>T missense_variant ORF1ab_pp1ab R5627L 9.26e-1 AY.9.2
V2884 16909G>T missense_variant ORF1ab_pp1ab A5637S 9.26e-1 AY.9.2
V289 535G>T stop_gained ORF1ab_pp1a G179* 1.00e+0 AY.9.2
V2894 16982G>T missense_variant ORF1ab_pp1ab R5661L 1.00e+0 AY.9.2
V2896 16988G>T missense_variant ORF1ab_pp1ab R5663L 9.35e-1 AY.9.2
V29 -142G>T upstream_gene_variant ORF1ab_pp1a None 9.26e-1 AY.9.2
V2919 17173G>T missense_variant ORF1ab_pp1ab D5725Y 1.00e+0 AY.9.2
V2923 17198G>T missense_variant ORF1ab_pp1ab R5733L 1.00e+0 AY.9.2
V2933 17287G>T stop_gained ORF1ab_pp1ab G5763* 1.00e+0 AY.9.2
V2935 17297G>T missense_variant ORF1ab_pp1ab R5766L 1.00e+0 AY.9.2
V2936 17300G>T missense_variant ORF1ab_pp1ab R5767L 1.00e+0 AY.9.2
V2956 17455G>T missense_variant ORF1ab_pp1ab V5819L 1.00e+0 AY.9.2
V296 551G>T missense_variant ORF1ab_pp1a R184L 1.00e+0 AY.9.2
V2960 17477G>T missense_variant ORF1ab_pp1ab R5826L 1.00e+0 AY.9.2
V297 559G>T missense_variant ORF1ab_pp1a D187Y 1.00e+0 AY.9.2
V2992 17753G>T missense_variant ORF1ab_pp1ab R5918L 1.00e+0 AY.9.2
V3039 18002G>T missense_variant ORF1ab_pp1ab R6001L 1.00e+0 AY.9.2
V3040 18004G>T stop_gained ORF1ab_pp1ab E6002* 1.00e+0 AY.9.2
V3045 18026G>T missense_variant ORF1ab_pp1ab R6009L 1.00e+0 AY.9.2
V3048 18043G>T missense_variant ORF1ab_pp1ab D6015Y 1.00e+0 AY.9.2
V3049 18049G>T stop_gained ORF1ab_pp1ab E6017* 1.00e+0 AY.9.2
V3085 18263G>T missense_variant ORF1ab_pp1ab R6088L 1.00e+0 AY.9.2
V3102 18389G>T missense_variant ORF1ab_pp1ab R6130L 1.00e+0 AY.9.2
V3105 18413G>T missense_variant ORF1ab_pp1ab R6138L 8.37e-1 AY.9.2
V311 620G>T missense_variant ORF1ab_pp1a R207L 1.00e+0 AY.9.2
V3115 18481G>T missense_variant ORF1ab_pp1ab V6161F 7.34e-1 AY.9.2
V3130 18625G>T stop_gained ORF1ab_pp1ab E6209* 9.26e-1 AY.9.2
V3135 18641G>T missense_variant ORF1ab_pp1ab R6214L 9.26e-1 AY.9.2
V3187 18943G>T missense_variant ORF1ab_pp1ab D6315Y 8.45e-1 AY.9.2
V321 649G>T stop_gained ORF1ab_pp1a E217* 1.00e+0 AY.9.2
V3216 19202G>T missense_variant ORF1ab_pp1ab R6401L 8.45e-1 AY.9.2
V3254 19538G>T missense_variant ORF1ab_pp1ab R6513L 1.00e+0 AY.9.2
V3293 19769G>T missense_variant ORF1ab_pp1ab R6590L 1.00e+0 AY.9.2
V3310 19870G>T missense_variant ORF1ab_pp1ab V6624L 6.24e-1 AY.9.2
V332 695G>T missense_variant ORF1ab_pp1a R232L 9.35e-1 AY.9.2
V3331 20027G>T missense_variant ORF1ab_pp1ab R6676L 1.00e+0 AY.9.2
V3334 20053G>T stop_gained ORF1ab_pp1ab E6685* 1.00e+0 AY.9.2
V3338 20062G>T missense_variant ORF1ab_pp1ab V6688F 1.00e+0 AY.9.2
V3345 20126G>T missense_variant ORF1ab_pp1ab R6709L 9.35e-1 AY.9.2
V336 731G>T missense_variant ORF1ab_pp1a R244L 1.00e+0 AY.9.2
V3415 20527G>T missense_variant ORF1ab_pp1ab A6843S 9.35e-1 AY.9.2
V3428 20683G>T missense_variant ORF1ab_pp1ab D6895Y 9.26e-1 AY.9.2
V3444 20791G>T missense_variant ORF1ab_pp1ab D6931Y 8.45e-1 AY.9.2
V3462 20893G>T missense_variant ORF1ab_pp1ab V6965L 7.71e-1 AY.9.2
V3487 21041G>T missense_variant ORF1ab_pp1ab R7014L 1.00e+0 AY.9.2
V3488 21043G>T stop_gained ORF1ab_pp1ab E7015* 1.00e+0 AY.9.2
V3517 -5G>T upstream_gene_variant S None 1.00e+0 AY.9.2
V3562 101G>T missense_variant S R34L 1.00e+0 AY.9.2
V3621 367G>T missense_variant S A123S 7.56e-1 AY.9.2
V370 902G>T missense_variant ORF1ab_pp1a R301L 6.55e-1 AY.9.2
V38 -114G>T upstream_gene_variant ORF1ab_pp1a None 1.00e+0 AY.9.2
V3822 1030G>T missense_variant S A344S 7.98e-1 AY.9.2
V3857 1231G>T missense_variant S A411S 7.98e-1 AY.9.2
V3959 1730G>T missense_variant S R577L 1.00e+0 AY.9.2
V3985 1901G>T missense_variant S R634L 1.00e+0 AY.9.2
V3991 1937G>T missense_variant S R646L 8.37e-1 AY.9.2
V4005 2014G>T missense_variant S A672S 1.00e+0 AY.9.2
V401 1024G>T stop_gained ORF1ab_pp1a E342* 1.00e+0 AY.9.2
V4024 2042C>T missense_variant S P681L 8.37e-1 AY.9.2
V4025 2045G>T missense_variant S R682L 1.00e+0 AY.9.2
V4026 2048G>T missense_variant S R683L 8.37e-1 AY.9.2
V4029 2054G>T missense_variant S R685L 1.00e+0 AY.9.2
V4065 2294G>T missense_variant S R765L 8.82e-1 AY.9.2
V41 -101G>T upstream_gene_variant ORF1ab_pp1a None 9.35e-1 AY.9.2
V4109 2569G>T missense_variant S G857C 1.00e+0 AY.9.2
V4150 2948G>T missense_variant S R983L 1.00e+0 AY.9.2
V4185 3272G>T missense_variant S R1091L 7.98e-1 AY.9.2
V4235 3554G>T missense_variant S R1185L 1.00e+0 AY.9.2
V4244 3595G>T missense_variant S D1199Y 7.64e-1 AY.9.2
V4345 89G>T missense_variant ORF3a R30L 8.57e-1 AY.9.2
V437 1156G>T stop_gained ORF1ab_pp1a E386* 1.00e+0 AY.9.2
V4379 130G>T stop_gained ORF3a G44* 8.57e-1 AY.9.2
V4391 148G>T missense_variant ORF3a V50F 8.57e-1 AY.9.2
V4459 289G>T missense_variant ORF3a V97F 8.37e-1 AY.9.2
V446 1193G>T missense_variant ORF1ab_pp1a R398L 9.35e-1 AY.9.2
V453 1205G>T missense_variant ORF1ab_pp1a R402L 9.35e-1 AY.9.2
V4614 751G>T missense_variant ORF3a G251C 9.26e-1 AY.9.2
V4620 760G>T stop_gained ORF3a G254* 6.55e-1 AY.9.2
V464 1277G>T missense_variant ORF1ab_pp1a R426L 1.00e+0 AY.9.2
V4686 182G>T missense_variant E R61L 8.45e-1 AY.9.2
V469 1285G>T missense_variant ORF1ab_pp1a A429S 1.00e+0 AY.9.2
V4722 16G>T missense_variant M G6C 6.17e-1 AY.9.2
V4772 320G>T missense_variant M R107L 8.45e-1 AY.9.2
V4782 473G>T missense_variant M R158L 9.35e-1 AY.9.2
V4784 521G>T missense_variant M R174L 1.00e+0 AY.9.2
V4788 593G>T missense_variant M R198L 1.00e+0 AY.9.2
V4800 13G>T missense_variant ORF6 V5F 7.64e-1 AY.9.2
V484 1330G>T stop_gained ORF1ab_pp1a E444* 1.00e+0 AY.9.2
V4864 37G>T missense_variant ORF7a A13S 1.00e+0 AY.9.2
V4895 121G>T stop_gained ORF7a E41* 8.02e-1 AY.9.2
V4930 208G>T missense_variant ORF7a G70C 7.17e-1 AY.9.2
V5056 127G>T missense_variant ORF7b A43S 7.14e-1 AY.9.2
V5061 -4G>T upstream_gene_variant ORF8 None 6.30e-1 AY.9.2
V511 1420G>T missense_variant ORF1ab_pp1a A474S 1.00e+0 AY.9.2
V5173 223G>T missense_variant ORF8 D75Y 8.82e-1 AY.9.2
V5176 229G>T missense_variant ORF8 G77C 1.00e+0 AY.9.2
V5209 340G>T missense_variant ORF8 V114F 1.00e+0 AY.9.2
V5212 344G>T missense_variant ORF8 R115L 8.82e-1 AY.9.2
V5234 -12G>T upstream_gene_variant N None 1.00e+0 AY.9.2
V5266 29G>T missense_variant N R10L 1.00e+0 AY.9.2
V5324 107G>T missense_variant N R36L 9.35e-1 AY.9.2
V5331 119G>T missense_variant N R40L 7.07e-1 AY.9.2
V5333 122G>T missense_variant N R41L 1.00e+0 AY.9.2
V5345 203G>T missense_variant N R68L 1.00e+0 AY.9.2
V5349 214G>T missense_variant N V72F 1.00e+0 AY.9.2
V5355 263G>T missense_variant N R88L 1.00e+0 AY.9.2
V5359 278G>T missense_variant N R93L 1.00e+0 AY.9.2
V5361 284G>T missense_variant N R95L 1.00e+0 AY.9.2
V5364 295G>T missense_variant N G99C 1.00e+0 AY.9.2
V5379 385G>T missense_variant N G129C 1.00e+0 AY.9.2
V5395 446G>T missense_variant N R149L 1.00e+0 AY.9.2
V5404 472G>T missense_variant N V158L 1.00e+0 AY.9.2
V5414 517G>T missense_variant N A173S 9.35e-1 AY.9.2
V5419 535G>T missense_variant N G179C 7.34e-1 AY.9.2
V5429 554G>T missense_variant N R185L 1.00e+0 AY.9.2
V5434 566G>T missense_variant N R189L 8.82e-1 AY.9.2
V5437 572G>T missense_variant N R191L 1.00e+0 AY.9.2
V5536 776G>T missense_variant N R259L 1.00e+0 AY.9.2
V5537 785G>T missense_variant N R262L 1.00e+0 AY.9.2
V554 1625G>T missense_variant ORF1ab_pp1a R542L 1.00e+0 AY.9.2
V5546 823G>T missense_variant N G275C 1.00e+0 AY.9.2
V5547 830G>T missense_variant N R277L 1.00e+0 AY.9.2
V556 1634G>T missense_variant ORF1ab_pp1a R545L 1.00e+0 AY.9.2
V5565 931G>T missense_variant N A311S 9.35e-1 AY.9.2
V5566 946G>T stop_gained N G316* 1.00e+0 AY.9.2
V5570 956G>T missense_variant N R319L 1.00e+0 AY.9.2
V563 1649G>T missense_variant ORF1ab_pp1a R550L 1.00e+0 AY.9.2
V5688 16G>T missense_variant ORF10 V6F 9.26e-1 AY.9.2
V5690 22G>T missense_variant ORF10 A8S 9.26e-1 AY.9.2
V574 1679G>T missense_variant ORF1ab_pp1a R560L 1.00e+0 AY.9.2
V581 1696G>T missense_variant ORF1ab_pp1a A566S 1.00e+0 AY.9.2
V5875 222G>T synonymous_variant ORF1ab_pp1a S74S 8.37e-1 AY.9.2
V5970 726G>T synonymous_variant ORF1ab_pp1a T242T 9.35e-1 AY.9.2
V6010 999G>T synonymous_variant ORF1ab_pp1a T333T 6.84e-1 AY.9.2
V6011 1002C>T synonymous_variant ORF1ab_pp1a G334G 6.55e-1 AY.9.2
V61 -68G>T upstream_gene_variant ORF1ab_pp1a None 8.82e-1 AY.9.2
V6165 2133G>T synonymous_variant ORF1ab_pp1a T711T 1.00e+0 AY.9.2
V631 1879G>T missense_variant ORF1ab_pp1a V627F 7.34e-1 AY.9.2
V643 1933G>T missense_variant ORF1ab_pp1a G645C 1.00e+0 AY.9.2
V6521 4743G>T synonymous_variant ORF1ab_pp1a T1581T 7.56e-1 AY.9.2
V657 1981G>T missense_variant ORF1ab_pp1a G661C 9.35e-1 AY.9.2
V6610 5364G>T synonymous_variant ORF1ab_pp1a T1788T 8.02e-1 AY.9.2
V6634 5592G>T synonymous_variant ORF1ab_pp1a T1864T 9.35e-1 AY.9.2
V6686 6006G>T synonymous_variant ORF1ab_pp1a T2002T 1.00e+0 AY.9.2
V6695 6072G>T synonymous_variant ORF1ab_pp1a S2024S 6.61e-1 AY.9.2
V6704 6099G>T synonymous_variant ORF1ab_pp1a A2033A 1.00e+0 AY.9.2
V6765 6585G>T synonymous_variant ORF1ab_pp1a P2195P 1.00e+0 AY.9.2
V6908 7791G>T synonymous_variant ORF1ab_pp1a T2597T 9.35e-1 AY.9.2
V6950 8088G>T synonymous_variant ORF1ab_pp1a A2696A 1.00e+0 AY.9.2
V6952 8103G>T synonymous_variant ORF1ab_pp1a A2701A 9.35e-1 AY.9.2
V7140 9606G>T synonymous_variant ORF1ab_pp1a T3202T 1.00e+0 AY.9.2
V72 -58G>T upstream_gene_variant ORF1ab_pp1a None 1.00e+0 AY.9.2
V747 2359G>T missense_variant ORF1ab_pp1a G787W 1.00e+0 AY.9.2
V7480 12249G>T synonymous_variant ORF1ab_pp1a T4083T 7.64e-1 AY.9.2
V752 2374G>T stop_gained ORF1ab_pp1a E792* 1.00e+0 AY.9.2
V7528 12681T>C synonymous_variant ORF1ab_pp1a Y4227Y 6.61e-1 AY.9.2
V7567 12975G>T synonymous_variant ORF1ab_pp1a S4325S 1.00e+0 AY.9.2
V7604 13239G>T synonymous_variant ORF1ab_pp1ab P4413P 6.84e-1 AY.9.2
V762 2452G>T missense_variant ORF1ab_pp1a G818C 1.00e+0 AY.9.2
V7699 14004G>T synonymous_variant ORF1ab_pp1ab T4668T 8.57e-1 AY.9.2
V782 2593G>T missense_variant ORF1ab_pp1a G865C 8.45e-1 AY.9.2
V787 2614G>T missense_variant ORF1ab_pp1a A872S 8.45e-1 AY.9.2
V7951 15957G>T synonymous_variant ORF1ab_pp1ab P5319P 1.00e+0 AY.9.2
V8101 17070G>T synonymous_variant ORF1ab_pp1ab T5690T 7.34e-1 AY.9.2
V8252 18198G>T synonymous_variant ORF1ab_pp1ab P6066P 9.35e-1 AY.9.2
V8296 18492G>T synonymous_variant ORF1ab_pp1ab P6164P 7.07e-1 AY.9.2
V8328 18696G>T synonymous_variant ORF1ab_pp1ab A6232A 1.00e+0 AY.9.2
V8388 19191G>T synonymous_variant ORF1ab_pp1ab T6397T 8.45e-1 AY.9.2
V8446 19698G>T synonymous_variant ORF1ab_pp1ab T6566T 6.07e-1 AY.9.2
V8473 19998A>G synonymous_variant ORF1ab_pp1ab L6666L 7.07e-1 AY.9.2
V8502 20205G>T synonymous_variant ORF1ab_pp1ab A6735A 9.35e-1 AY.9.2
V8519 20406G>T synonymous_variant ORF1ab_pp1ab A6802A 9.35e-1 AY.9.2
V8549 20673G>T synonymous_variant ORF1ab_pp1ab T6891T 7.56e-1 AY.9.2
V8698 489G>T synonymous_variant S A163A 6.42e-1 AY.9.2
V8711 624G>T synonymous_variant S T208T 8.82e-1 AY.9.2
V882 2977G>T missense_variant ORF1ab_pp1a G993C 1.00e+0 AY.9.2
V8973 2637G>T synonymous_variant S A879A 6.83e-1 AY.9.2
V9003 2883G>T synonymous_variant S T961T 6.83e-1 AY.9.2
V9154 108G>T synonymous_variant ORF3a P36P 9.26e-1 AY.9.2
V9253 801G>T synonymous_variant ORF3a P267P 8.45e-1 AY.9.2
V9254 804G>T synonymous_variant ORF3a T268T 8.45e-1 AY.9.2
V9274 108G>T synonymous_variant E A36A 8.45e-1 AY.9.2
V9376 525G>T synonymous_variant M T175T 7.07e-1 AY.9.2
V9381 552G>T synonymous_variant M S184S 8.82e-1 AY.9.2
V9480 315G>T synonymous_variant ORF7a A105A 6.55e-1 AY.9.2
V9550 309G>T synonymous_variant ORF8 S103S 9.35e-1 AY.9.2
V9568 48G>T synonymous_variant N T16T 7.64e-1 AY.9.2
V9596 150G>T synonymous_variant N A50A 9.35e-1 AY.9.2
V9753 939G>T synonymous_variant N A313A 7.98e-1 AY.9.2
V978 3319G>T stop_gained ORF1ab_pp1a G1107* 1.00e+0 AY.9.2
V988 3355G>T missense_variant ORF1ab_pp1a G1119C 1.00e+0 AY.9.2
V1002 3424G>T stop_gained ORF1ab_pp1a E1142* 1.00e+0 B.1.1
V1026 3509G>T missense_variant ORF1ab_pp1a R1170L 1.00e+0 B.1.1
V11 -194G>T upstream_gene_variant ORF1ab_pp1a None 1.00e+0 B.1.1
V1133 4127G>T missense_variant ORF1ab_pp1a R1376L 7.07e-1 B.1.1
V1139 4157G>T missense_variant ORF1ab_pp1a R1386L 1.00e+0 B.1.1
V1146 4211G>T missense_variant ORF1ab_pp1a R1404L 7.07e-1 B.1.1
V1159 4318G>T missense_variant ORF1ab_pp1a D1440Y 1.00e+0 B.1.1
V1164 4391G>T missense_variant ORF1ab_pp1a R1464L 1.00e+0 B.1.1
V118 28G>T stop_gained ORF1ab_pp1a E10* 1.00e+0 B.1.1
V120 40G>T missense_variant ORF1ab_pp1a V14F 7.07e-1 B.1.1
V124 71G>T missense_variant ORF1ab_pp1a R24L 1.00e+0 B.1.1
V125 73G>T missense_variant ORF1ab_pp1a D25Y 7.07e-1 B.1.1
V126 76G>T missense_variant ORF1ab_pp1a V26L 7.07e-1 B.1.1
V1298 5248G>T missense_variant ORF1ab_pp1a V1750L 7.07e-1 B.1.1
V130 82G>T missense_variant ORF1ab_pp1a V28L 1.00e+0 B.1.1
V132 86G>T missense_variant ORF1ab_pp1a R29L 1.00e+0 B.1.1
V1345 5548G>T missense_variant ORF1ab_pp1a G1850C 1.00e+0 B.1.1
V139 103G>T missense_variant ORF1ab_pp1a V35L 7.07e-1 B.1.1
V1409 6032G>T missense_variant ORF1ab_pp1a R2011L 1.00e+0 B.1.1
V1439 6124G>T stop_gained ORF1ab_pp1a E2042* 1.00e+0 B.1.1
V1464 6208G>T stop_gained ORF1ab_pp1a E2070* 7.07e-1 B.1.1
V1544 6476G>T missense_variant ORF1ab_pp1a R2159L 1.00e+0 B.1.1
V1546 6488G>T missense_variant ORF1ab_pp1a R2163L 1.00e+0 B.1.1
V1565 6619G>T missense_variant ORF1ab_pp1a G2207C 7.07e-1 B.1.1
V1578 6742G>T missense_variant ORF1ab_pp1a A2248S 1.00e+0 B.1.1
V162 178G>T missense_variant ORF1ab_pp1a V60F 7.07e-1 B.1.1
V1644 7207G>T missense_variant ORF1ab_pp1a G2403C 1.00e+0 B.1.1
V1649 7244G>T missense_variant ORF1ab_pp1a R2415L 1.00e+0 B.1.1
V1651 7264G>T stop_gained ORF1ab_pp1a E2422* 7.07e-1 B.1.1
V1662 7471G>T missense_variant ORF1ab_pp1a V2491F 1.00e+0 B.1.1
V168 218G>T missense_variant ORF1ab_pp1a R73L 1.00e+0 B.1.1
V1712 7783G>T missense_variant ORF1ab_pp1a V2595F 1.00e+0 B.1.1
V1716 7810G>T missense_variant ORF1ab_pp1a V2604L 1.00e+0 B.1.1
V1743 7913G>T missense_variant ORF1ab_pp1a R2638L 1.00e+0 B.1.1
V175 230G>T missense_variant ORF1ab_pp1a R77L 1.00e+0 B.1.1
V1753 8002G>T missense_variant ORF1ab_pp1a D2668Y 1.00e+0 B.1.1
V1760 8057G>T missense_variant ORF1ab_pp1a R2686L 7.07e-1 B.1.1
V1766 8090G>T missense_variant ORF1ab_pp1a R2697L 1.00e+0 B.1.1
V1774 8143G>T missense_variant ORF1ab_pp1a V2715F 7.07e-1 B.1.1
V1777 8177G>T missense_variant ORF1ab_pp1a R2726L 1.00e+0 B.1.1
V1778 8189G>T missense_variant ORF1ab_pp1a R2730L 1.00e+0 B.1.1
V1819 8453G>T missense_variant ORF1ab_pp1a R2818L 1.00e+0 B.1.1
V1829 8522G>T missense_variant ORF1ab_pp1a R2841L 1.00e+0 B.1.1
V1857 8624G>T missense_variant ORF1ab_pp1a R2875L 1.00e+0 B.1.1
V1883 8846G>T missense_variant ORF1ab_pp1a R2949L 1.00e+0 B.1.1
V1886 8858G>T missense_variant ORF1ab_pp1a R2953L 1.00e+0 B.1.1
V1900 8959G>T missense_variant ORF1ab_pp1a G2987C 1.00e+0 B.1.1
V1961 9491G>T missense_variant ORF1ab_pp1a R3164L 1.00e+0 B.1.1
V1964 9581G>T missense_variant ORF1ab_pp1a R3194L 1.00e+0 B.1.1
V1993 9874G>T missense_variant ORF1ab_pp1a G3292C 1.00e+0 B.1.1
V2030 10103G>T missense_variant ORF1ab_pp1a R3368L 1.00e+0 B.1.1
V2055 10417G>T missense_variant ORF1ab_pp1a A3473S 1.00e+0 B.1.1
V2060 10454G>T missense_variant ORF1ab_pp1a R3485L 1.00e+0 B.1.1
V207 277G>T stop_gained ORF1ab_pp1a E93* 1.00e+0 B.1.1
V2079 10570G>T missense_variant ORF1ab_pp1a V3524F 7.07e-1 B.1.1
V2087 10625G>T missense_variant ORF1ab_pp1a R3542L 1.00e+0 B.1.1
V212 292G>T missense_variant ORF1ab_pp1a G98C 1.00e+0 B.1.1
V215 296G>T missense_variant ORF1ab_pp1a R99L 1.00e+0 B.1.1
V2151 10985G>T missense_variant ORF1ab_pp1a R3662L 1.00e+0 B.1.1
V2238 11405G>T missense_variant ORF1ab_pp1a R3802L 1.00e+0 B.1.1
V228 337G>T stop_gained ORF1ab_pp1a E113* 1.00e+0 B.1.1
V2313 11996G>T missense_variant ORF1ab_pp1a R3999L 7.07e-1 B.1.1
V2358 12449G>T missense_variant ORF1ab_pp1a R4150L 1.00e+0 B.1.1
V2362 12469G>T missense_variant ORF1ab_pp1a G4157C 1.00e+0 B.1.1
V2386 12559G>T missense_variant ORF1ab_pp1a D4187Y 1.00e+0 B.1.1
V239 356G>T missense_variant ORF1ab_pp1a R119L 1.00e+0 B.1.1
V2406 12752G>T missense_variant ORF1ab_pp1a R4251L 1.00e+0 B.1.1
V2424 12992G>T missense_variant ORF1ab_pp1a R4331L 1.00e+0 B.1.1
V2438 13114G>T missense_variant ORF1ab_pp1a V4372F 1.00e+0 B.1.1
V2439 13120G>T missense_variant ORF1ab_pp1a G4374C 1.00e+0 B.1.1
V2445 13160G>T missense_variant ORF1ab_pp1a R4387L 1.00e+0 B.1.1
V2446 13162G>T stop_gained ORF1ab_pp1a E4388* 1.00e+0 B.1.1
V245 379G>T missense_variant ORF1ab_pp1a G127C 1.00e+0 B.1.1
V2452 13204G>T missense_variant ORF1ab_pp1a G4402W 1.00e+0 B.1.1
V2453 13213G>T missense_variant ORF1ab_pp1ab G4405C 1.00e+0 B.1.1
V2456 13229G>T missense_variant ORF1ab_pp1ab R4410L 1.00e+0 B.1.1
V2459 13243G>T missense_variant ORF1ab_pp1ab G4415C 1.00e+0 B.1.1
V2463 13267G>T missense_variant ORF1ab_pp1ab V4423L 1.00e+0 B.1.1
V2470 13340G>T missense_variant ORF1ab_pp1ab R4447L 1.00e+0 B.1.1
V2496 13498G>T missense_variant ORF1ab_pp1ab G4500C 7.07e-1 B.1.1
V2503 13529G>T missense_variant ORF1ab_pp1ab R4510L 1.00e+0 B.1.1
V2507 13558G>T missense_variant ORF1ab_pp1ab V4520F 1.00e+0 B.1.1
V251 409G>T missense_variant ORF1ab_pp1a G137C 1.00e+0 B.1.1
V2529 13696G>T missense_variant ORF1ab_pp1ab V4566L 1.00e+0 B.1.1
V2532 13702G>T missense_variant ORF1ab_pp1ab A4568S 1.00e+0 B.1.1
V2534 13718G>T missense_variant ORF1ab_pp1ab R4573L 7.07e-1 B.1.1
V2535 13724G>T missense_variant ORF1ab_pp1ab R4575L 1.00e+0 B.1.1
V2540 13766G>T missense_variant ORF1ab_pp1ab R4589L 1.00e+0 B.1.1
V2543 13834G>T missense_variant ORF1ab_pp1ab G4612C 1.00e+0 B.1.1
V255 412G>T missense_variant ORF1ab_pp1a A138S 1.00e+0 B.1.1
V2584 14030G>T missense_variant ORF1ab_pp1ab R4677L 1.00e+0 B.1.1
V2612 14320G>T missense_variant ORF1ab_pp1ab A4774S 1.00e+0 B.1.1
V2615 14351G>T missense_variant ORF1ab_pp1ab R4784L 1.00e+0 B.1.1
V2620 14413G>T missense_variant ORF1ab_pp1ab G4805C 1.00e+0 B.1.1
V2631 14530G>T missense_variant ORF1ab_pp1ab D4844Y 1.00e+0 B.1.1
V2632 14546G>T missense_variant ORF1ab_pp1ab R4849L 1.00e+0 B.1.1
V2641 14659G>T missense_variant ORF1ab_pp1ab V4887F 1.00e+0 B.1.1
V2654 14774G>T missense_variant ORF1ab_pp1ab R4925L 1.00e+0 B.1.1
V2656 14840G>T missense_variant ORF1ab_pp1ab R4947L 1.00e+0 B.1.1
V2657 14845G>T missense_variant ORF1ab_pp1ab V4949L 1.00e+0 B.1.1
V2680 15095G>T missense_variant ORF1ab_pp1ab R5032L 1.00e+0 B.1.1
V2687 15128G>T missense_variant ORF1ab_pp1ab R5043L 7.07e-1 B.1.1
V2695 15187G>T missense_variant ORF1ab_pp1ab G5063C 7.07e-1 B.1.1
V270 442G>T stop_gained ORF1ab_pp1a E148* 1.00e+0 B.1.1
V2702 15325G>T missense_variant ORF1ab_pp1ab D5109Y 7.07e-1 B.1.1
V2706 15338G>T missense_variant ORF1ab_pp1ab R5113L 1.00e+0 B.1.1
V2715 15415G>T missense_variant ORF1ab_pp1ab A5139S 1.00e+0 B.1.1
V2716 15425G>T missense_variant ORF1ab_pp1ab R5142L 7.07e-1 B.1.1
V2746 15749G>T missense_variant ORF1ab_pp1ab R5250L 1.00e+0 B.1.1
V2747 15754G>T missense_variant ORF1ab_pp1ab V5252L 1.00e+0 B.1.1
V2772 16034G>T missense_variant ORF1ab_pp1ab R5345L 1.00e+0 B.1.1
V2796 16273G>T missense_variant ORF1ab_pp1ab D5425Y 1.00e+0 B.1.1
V2812 16436G>T missense_variant ORF1ab_pp1ab R5479L 1.00e+0 B.1.1
V2822 16505G>T missense_variant ORF1ab_pp1ab R5502L 1.00e+0 B.1.1
V2823 16529G>T missense_variant ORF1ab_pp1ab R5510L 1.00e+0 B.1.1
V2834 16607G>T missense_variant ORF1ab_pp1ab R5536L 7.07e-1 B.1.1
V285 512G>T missense_variant ORF1ab_pp1a R171L 1.00e+0 B.1.1
V287 524G>T missense_variant ORF1ab_pp1a R175L 7.07e-1 B.1.1
V2880 16880G>T missense_variant ORF1ab_pp1ab R5627L 1.00e+0 B.1.1
V2884 16909G>T missense_variant ORF1ab_pp1ab A5637S 1.00e+0 B.1.1
V289 535G>T stop_gained ORF1ab_pp1a G179* 1.00e+0 B.1.1
V2894 16982G>T missense_variant ORF1ab_pp1ab R5661L 7.07e-1 B.1.1
V2896 16988G>T missense_variant ORF1ab_pp1ab R5663L 7.07e-1 B.1.1
V2919 17173G>T missense_variant ORF1ab_pp1ab D5725Y 1.00e+0 B.1.1
V2923 17198G>T missense_variant ORF1ab_pp1ab R5733L 1.00e+0 B.1.1
V2933 17287G>T stop_gained ORF1ab_pp1ab G5763* 1.00e+0 B.1.1
V2935 17297G>T missense_variant ORF1ab_pp1ab R5766L 7.07e-1 B.1.1
V2936 17300G>T missense_variant ORF1ab_pp1ab R5767L 1.00e+0 B.1.1
V2956 17455G>T missense_variant ORF1ab_pp1ab V5819L 1.00e+0 B.1.1
V296 551G>T missense_variant ORF1ab_pp1a R184L 1.00e+0 B.1.1
V2960 17477G>T missense_variant ORF1ab_pp1ab R5826L 1.00e+0 B.1.1
V297 559G>T missense_variant ORF1ab_pp1a D187Y 1.00e+0 B.1.1
V2992 17753G>T missense_variant ORF1ab_pp1ab R5918L 1.00e+0 B.1.1
V3040 18004G>T stop_gained ORF1ab_pp1ab E6002* 1.00e+0 B.1.1
V3045 18026G>T missense_variant ORF1ab_pp1ab R6009L 1.00e+0 B.1.1
V3048 18043G>T missense_variant ORF1ab_pp1ab D6015Y 1.00e+0 B.1.1
V3049 18049G>T stop_gained ORF1ab_pp1ab E6017* 1.00e+0 B.1.1
V3085 18263G>T missense_variant ORF1ab_pp1ab R6088L 1.00e+0 B.1.1
V3130 18625G>T stop_gained ORF1ab_pp1ab E6209* 1.00e+0 B.1.1
V3135 18641G>T missense_variant ORF1ab_pp1ab R6214L 1.00e+0 B.1.1
V3187 18943G>T missense_variant ORF1ab_pp1ab D6315Y 1.00e+0 B.1.1
V321 649G>T stop_gained ORF1ab_pp1a E217* 1.00e+0 B.1.1
V3216 19202G>T missense_variant ORF1ab_pp1ab R6401L 1.00e+0 B.1.1
V3254 19538G>T missense_variant ORF1ab_pp1ab R6513L 1.00e+0 B.1.1
V332 695G>T missense_variant ORF1ab_pp1a R232L 1.00e+0 B.1.1
V3331 20027G>T missense_variant ORF1ab_pp1ab R6676L 1.00e+0 B.1.1
V3334 20053G>T stop_gained ORF1ab_pp1ab E6685* 1.00e+0 B.1.1
V3338 20062G>T missense_variant ORF1ab_pp1ab V6688F 1.00e+0 B.1.1
V336 731G>T missense_variant ORF1ab_pp1a R244L 1.00e+0 B.1.1
V3415 20527G>T missense_variant ORF1ab_pp1ab A6843S 1.00e+0 B.1.1
V3428 20683G>T missense_variant ORF1ab_pp1ab D6895Y 1.00e+0 B.1.1
V3444 20791G>T missense_variant ORF1ab_pp1ab D6931Y 1.00e+0 B.1.1
V3462 20893G>T missense_variant ORF1ab_pp1ab V6965L 1.00e+0 B.1.1
V3487 21041G>T missense_variant ORF1ab_pp1ab R7014L 1.00e+0 B.1.1
V3488 21043G>T stop_gained ORF1ab_pp1ab E7015* 1.00e+0 B.1.1
V3517 -5G>T upstream_gene_variant S None 1.00e+0 B.1.1
V3562 101G>T missense_variant S R34L 1.00e+0 B.1.1
V3621 367G>T missense_variant S A123S 1.00e+0 B.1.1
V370 902G>T missense_variant ORF1ab_pp1a R301L 7.07e-1 B.1.1
V38 -114G>T upstream_gene_variant ORF1ab_pp1a None 1.00e+0 B.1.1
V3857 1231G>T missense_variant S A411S 7.07e-1 B.1.1
V3959 1730G>T missense_variant S R577L 7.07e-1 B.1.1
V396 1003G>T missense_variant ORF1ab_pp1a D335Y 1.00e+0 B.1.1
V3985 1901G>T missense_variant S R634L 1.00e+0 B.1.1
V3991 1937G>T missense_variant S R646L 7.07e-1 B.1.1
V401 1024G>T stop_gained ORF1ab_pp1a E342* 1.00e+0 B.1.1
V4025 2045G>T missense_variant S R682L 1.00e+0 B.1.1
V4029 2054G>T missense_variant S R685L 1.00e+0 B.1.1
V41 -101G>T upstream_gene_variant ORF1ab_pp1a None 7.07e-1 B.1.1
V4109 2569G>T missense_variant S G857C 1.00e+0 B.1.1
V4150 2948G>T missense_variant S R983L 1.00e+0 B.1.1
V4235 3554G>T missense_variant S R1185L 1.00e+0 B.1.1
V4244 3595G>T missense_variant S D1199Y 1.00e+0 B.1.1
V4302 -6G>T upstream_gene_variant ORF3a None 1.00e+0 B.1.1
V437 1156G>T stop_gained ORF1ab_pp1a E386* 1.00e+0 B.1.1
V4379 130G>T stop_gained ORF3a G44* 7.07e-1 B.1.1
V4391 148G>T missense_variant ORF3a V50F 1.00e+0 B.1.1
V4410 175G>T missense_variant ORF3a A59S 7.07e-1 B.1.1
V446 1193G>T missense_variant ORF1ab_pp1a R398L 1.00e+0 B.1.1
V453 1205G>T missense_variant ORF1ab_pp1a R402L 1.00e+0 B.1.1
V4672 70G>T missense_variant E V24L 1.00e+0 B.1.1
V4686 182G>T missense_variant E R61L 7.07e-1 B.1.1
V469 1285G>T missense_variant ORF1ab_pp1a A429S 1.00e+0 B.1.1
V4772 320G>T missense_variant M R107L 7.07e-1 B.1.1
V4782 473G>T missense_variant M R158L 1.00e+0 B.1.1
V4784 521G>T missense_variant M R174L 1.00e+0 B.1.1
V4788 593G>T missense_variant M R198L 1.00e+0 B.1.1
V484 1330G>T stop_gained ORF1ab_pp1a E444* 1.00e+0 B.1.1
V4864 37G>T missense_variant ORF7a A13S 7.07e-1 B.1.1
V5234 -12G>T upstream_gene_variant N None 7.07e-1 B.1.1
V5266 29G>T missense_variant N R10L 7.07e-1 B.1.1
V5349 214G>T missense_variant N V72F 1.00e+0 B.1.1
V5355 263G>T missense_variant N R88L 1.00e+0 B.1.1
V5364 295G>T missense_variant N G99C 1.00e+0 B.1.1
V5379 385G>T missense_variant N G129C 1.00e+0 B.1.1
V5395 446G>T missense_variant N R149L 1.00e+0 B.1.1
V5404 472G>T missense_variant N V158L 1.00e+0 B.1.1
V5414 517G>T missense_variant N A173S 1.00e+0 B.1.1
V5434 566G>T missense_variant N R189L 7.07e-1 B.1.1
V5536 776G>T missense_variant N R259L 1.00e+0 B.1.1
V5537 785G>T missense_variant N R262L 1.00e+0 B.1.1
V5546 823G>T missense_variant N G275C 1.00e+0 B.1.1
V5547 830G>T missense_variant N R277L 1.00e+0 B.1.1
V556 1634G>T missense_variant ORF1ab_pp1a R545L 1.00e+0 B.1.1
V5565 931G>T missense_variant N A311S 7.07e-1 B.1.1
V5566 946G>T stop_gained N G316* 1.00e+0 B.1.1
V5570 956G>T missense_variant N R319L 1.00e+0 B.1.1
V563 1649G>T missense_variant ORF1ab_pp1a R550L 1.00e+0 B.1.1
V581 1696G>T missense_variant ORF1ab_pp1a A566S 1.00e+0 B.1.1
V6165 2133G>T synonymous_variant ORF1ab_pp1a T711T 7.07e-1 B.1.1
V6704 6099G>T synonymous_variant ORF1ab_pp1a A2033A 1.00e+0 B.1.1
V6908 7791G>T synonymous_variant ORF1ab_pp1a T2597T 1.00e+0 B.1.1
V72 -58G>T upstream_gene_variant ORF1ab_pp1a None 7.07e-1 B.1.1
V747 2359G>T missense_variant ORF1ab_pp1a G787W 7.07e-1 B.1.1
V752 2374G>T stop_gained ORF1ab_pp1a E792* 1.00e+0 B.1.1
V7567 12975G>T synonymous_variant ORF1ab_pp1a S4325S 1.00e+0 B.1.1
V762 2452G>T missense_variant ORF1ab_pp1a G818C 1.00e+0 B.1.1
V7751 14358G>T synonymous_variant ORF1ab_pp1ab T4786T 1.00e+0 B.1.1
V782 2593G>T missense_variant ORF1ab_pp1a G865C 7.07e-1 B.1.1
V787 2614G>T missense_variant ORF1ab_pp1a A872S 1.00e+0 B.1.1
V7951 15957G>T synonymous_variant ORF1ab_pp1ab P5319P 7.07e-1 B.1.1
V8252 18198G>T synonymous_variant ORF1ab_pp1ab P6066P 7.07e-1 B.1.1
V8502 20205G>T synonymous_variant ORF1ab_pp1ab A6735A 1.00e+0 B.1.1
V8519 20406G>T synonymous_variant ORF1ab_pp1ab A6802A 1.00e+0 B.1.1
V8711 624G>T synonymous_variant S T208T 1.00e+0 B.1.1
V882 2977G>T missense_variant ORF1ab_pp1a G993C 7.07e-1 B.1.1
V9253 801G>T synonymous_variant ORF3a P267P 1.00e+0 B.1.1
V9274 108G>T synonymous_variant E A36A 7.07e-1 B.1.1
V9550 309G>T synonymous_variant ORF8 S103S 7.07e-1 B.1.1
V978 3319G>T stop_gained ORF1ab_pp1a G1107* 1.00e+0 B.1.1
V988 3355G>T missense_variant ORF1ab_pp1a G1119C 1.00e+0 B.1.1
V1002 3424G>T stop_gained ORF1ab_pp1a E1142* 9.26e-1 B.1.617.2
V1026 3509G>T missense_variant ORF1ab_pp1a R1170L 8.51e-1 B.1.617.2
V103 -20G>T upstream_gene_variant ORF1ab_pp1a None 7.42e-1 B.1.617.2
V11 -194G>T upstream_gene_variant ORF1ab_pp1a None 6.21e-1 B.1.617.2
V1133 4127G>T missense_variant ORF1ab_pp1a R1376L 8.78e-1 B.1.617.2
V1139 4157G>T missense_variant ORF1ab_pp1a R1386L 9.26e-1 B.1.617.2
V1146 4211G>T missense_variant ORF1ab_pp1a R1404L 9.26e-1 B.1.617.2
V1159 4318G>T missense_variant ORF1ab_pp1a D1440Y 8.37e-1 B.1.617.2
V1164 4391G>T missense_variant ORF1ab_pp1a R1464L 8.29e-1 B.1.617.2
V118 28G>T stop_gained ORF1ab_pp1a E10* 8.74e-1 B.1.617.2
V120 40G>T missense_variant ORF1ab_pp1a V14F 9.00e-1 B.1.617.2
V124 71G>T missense_variant ORF1ab_pp1a R24L 9.26e-1 B.1.617.2
V125 73G>T missense_variant ORF1ab_pp1a D25Y 8.57e-1 B.1.617.2
V1252 4883G>T missense_variant ORF1ab_pp1a R1628L 8.10e-1 B.1.617.2
V126 76G>T missense_variant ORF1ab_pp1a V26L 9.26e-1 B.1.617.2
V1298 5248G>T missense_variant ORF1ab_pp1a V1750L 6.84e-1 B.1.617.2
V130 82G>T missense_variant ORF1ab_pp1a V28L 8.57e-1 B.1.617.2
V132 86G>T missense_variant ORF1ab_pp1a R29L 9.01e-1 B.1.617.2
V1345 5548G>T missense_variant ORF1ab_pp1a G1850C 6.56e-1 B.1.617.2
V1374 5767G>T missense_variant ORF1ab_pp1a A1923S 9.01e-1 B.1.617.2
V139 103G>T missense_variant ORF1ab_pp1a V35L 8.78e-1 B.1.617.2
V1409 6032G>T missense_variant ORF1ab_pp1a R2011L 8.73e-1 B.1.617.2
V1432 6097G>T missense_variant ORF1ab_pp1a A2033S 7.94e-1 B.1.617.2
V1439 6124G>T stop_gained ORF1ab_pp1a E2042* 9.00e-1 B.1.617.2
V146 128G>T missense_variant ORF1ab_pp1a R43L 9.01e-1 B.1.617.2
V1464 6208G>T stop_gained ORF1ab_pp1a E2070* 9.26e-1 B.1.617.2
V1544 6476G>T missense_variant ORF1ab_pp1a R2159L 8.74e-1 B.1.617.2
V1546 6488G>T missense_variant ORF1ab_pp1a R2163L 9.00e-1 B.1.617.2
V1565 6619G>T missense_variant ORF1ab_pp1a G2207C 6.08e-1 B.1.617.2
V1578 6742G>T missense_variant ORF1ab_pp1a A2248S 6.83e-1 B.1.617.2
V162 178G>T missense_variant ORF1ab_pp1a V60F 8.37e-1 B.1.617.2
V1644 7207G>T missense_variant ORF1ab_pp1a G2403C 9.26e-1 B.1.617.2
V1649 7244G>T missense_variant ORF1ab_pp1a R2415L 9.26e-1 B.1.617.2
V1651 7264G>T stop_gained ORF1ab_pp1a E2422* 9.26e-1 B.1.617.2
V1662 7471G>T missense_variant ORF1ab_pp1a V2491F 9.26e-1 B.1.617.2
V168 218G>T missense_variant ORF1ab_pp1a R73L 9.26e-1 B.1.617.2
V1712 7783G>T missense_variant ORF1ab_pp1a V2595F 8.78e-1 B.1.617.2
V1716 7810G>T missense_variant ORF1ab_pp1a V2604L 9.26e-1 B.1.617.2
V1743 7913G>T missense_variant ORF1ab_pp1a R2638L 8.78e-1 B.1.617.2
V175 230G>T missense_variant ORF1ab_pp1a R77L 9.01e-1 B.1.617.2
V1753 8002G>T missense_variant ORF1ab_pp1a D2668Y 9.26e-1 B.1.617.2
V1760 8057G>T missense_variant ORF1ab_pp1a R2686L 9.26e-1 B.1.617.2
V1766 8090G>T missense_variant ORF1ab_pp1a R2697L 9.26e-1 B.1.617.2
V1774 8143G>T missense_variant ORF1ab_pp1a V2715F 6.55e-1 B.1.617.2
V1777 8177G>T missense_variant ORF1ab_pp1a R2726L 9.26e-1 B.1.617.2
V1778 8189G>T missense_variant ORF1ab_pp1a R2730L 9.26e-1 B.1.617.2
V1819 8453G>T missense_variant ORF1ab_pp1a R2818L 9.01e-1 B.1.617.2
V1829 8522G>T missense_variant ORF1ab_pp1a R2841L 9.01e-1 B.1.617.2
V1846 8596G>T missense_variant ORF1ab_pp1a V2866L 9.01e-1 B.1.617.2
V1857 8624G>T missense_variant ORF1ab_pp1a R2875L 9.01e-1 B.1.617.2
V1883 8846G>T missense_variant ORF1ab_pp1a R2949L 8.78e-1 B.1.617.2
V1886 8858G>T missense_variant ORF1ab_pp1a R2953L 7.29e-1 B.1.617.2
V1900 8959G>T missense_variant ORF1ab_pp1a G2987C 9.01e-1 B.1.617.2
V1961 9491G>T missense_variant ORF1ab_pp1a R3164L 8.57e-1 B.1.617.2
V1964 9581G>T missense_variant ORF1ab_pp1a R3194L 9.26e-1 B.1.617.2
V1993 9874G>T missense_variant ORF1ab_pp1a G3292C 9.26e-1 B.1.617.2
V1997 9892G>T missense_variant ORF1ab_pp1a V3298L 7.56e-1 B.1.617.2
V2005 9968G>T missense_variant ORF1ab_pp1a R3323L 8.37e-1 B.1.617.2
V2030 10103G>T missense_variant ORF1ab_pp1a R3368L 9.00e-1 B.1.617.2
V2055 10417G>T missense_variant ORF1ab_pp1a A3473S 9.01e-1 B.1.617.2
V2060 10454G>T missense_variant ORF1ab_pp1a R3485L 8.57e-1 B.1.617.2
V207 277G>T stop_gained ORF1ab_pp1a E93* 9.26e-1 B.1.617.2
V2079 10570G>T missense_variant ORF1ab_pp1a V3524F 8.57e-1 B.1.617.2
V2087 10625G>T missense_variant ORF1ab_pp1a R3542L 9.00e-1 B.1.617.2
V212 292G>T missense_variant ORF1ab_pp1a G98C 8.78e-1 B.1.617.2
V215 296G>T missense_variant ORF1ab_pp1a R99L 8.78e-1 B.1.617.2
V2151 10985G>T missense_variant ORF1ab_pp1a R3662L 9.26e-1 B.1.617.2
V2238 11405G>T missense_variant ORF1ab_pp1a R3802L 8.78e-1 B.1.617.2
V228 337G>T stop_gained ORF1ab_pp1a E113* 9.00e-1 B.1.617.2
V2310 11978G>T missense_variant ORF1ab_pp1a R3993L 8.78e-1 B.1.617.2
V2313 11996G>T missense_variant ORF1ab_pp1a R3999L 8.19e-1 B.1.617.2
V2358 12449G>T missense_variant ORF1ab_pp1a R4150L 8.74e-1 B.1.617.2
V2362 12469G>T missense_variant ORF1ab_pp1a G4157C 9.00e-1 B.1.617.2
V2386 12559G>T missense_variant ORF1ab_pp1a D4187Y 9.26e-1 B.1.617.2
V239 356G>T missense_variant ORF1ab_pp1a R119L 7.42e-1 B.1.617.2
V2406 12752G>T missense_variant ORF1ab_pp1a R4251L 9.26e-1 B.1.617.2
V2424 12992G>T missense_variant ORF1ab_pp1a R4331L 9.26e-1 B.1.617.2
V243 371G>T missense_variant ORF1ab_pp1a R124L 8.02e-1 B.1.617.2
V2438 13114G>T missense_variant ORF1ab_pp1a V4372F 9.01e-1 B.1.617.2
V2439 13120G>T missense_variant ORF1ab_pp1a G4374C 7.17e-1 B.1.617.2
V2445 13160G>T missense_variant ORF1ab_pp1a R4387L 9.26e-1 B.1.617.2
V2446 13162G>T stop_gained ORF1ab_pp1a E4388* 9.26e-1 B.1.617.2
V245 379G>T missense_variant ORF1ab_pp1a G127C 9.01e-1 B.1.617.2
V2452 13204G>T missense_variant ORF1ab_pp1a G4402W 8.78e-1 B.1.617.2
V2453 13213G>T missense_variant ORF1ab_pp1ab G4405C 8.78e-1 B.1.617.2
V2456 13229G>T missense_variant ORF1ab_pp1ab R4410L 9.26e-1 B.1.617.2
V2459 13243G>T missense_variant ORF1ab_pp1ab G4415C 9.26e-1 B.1.617.2
V2463 13267G>T missense_variant ORF1ab_pp1ab V4423L 9.26e-1 B.1.617.2
V2470 13340G>T missense_variant ORF1ab_pp1ab R4447L 9.26e-1 B.1.617.2
V2474 13357G>T stop_gained ORF1ab_pp1ab E4453* 9.26e-1 B.1.617.2
V2496 13498G>T missense_variant ORF1ab_pp1ab G4500C 8.19e-1 B.1.617.2
V2500 13523G>T missense_variant ORF1ab_pp1ab R4508L 9.26e-1 B.1.617.2
V2503 13529G>T missense_variant ORF1ab_pp1ab R4510L 9.01e-1 B.1.617.2
V2507 13558G>T missense_variant ORF1ab_pp1ab V4520F 9.26e-1 B.1.617.2
V251 409G>T missense_variant ORF1ab_pp1a G137C 7.86e-1 B.1.617.2
V2528 13694G>T missense_variant ORF1ab_pp1ab R4565L 9.26e-1 B.1.617.2
V2529 13696G>T missense_variant ORF1ab_pp1ab V4566L 8.37e-1 B.1.617.2
V2532 13702G>T missense_variant ORF1ab_pp1ab A4568S 8.19e-1 B.1.617.2
V2534 13718G>T missense_variant ORF1ab_pp1ab R4573L 8.78e-1 B.1.617.2
V2535 13724G>T missense_variant ORF1ab_pp1ab R4575L 9.26e-1 B.1.617.2
V2540 13766G>T missense_variant ORF1ab_pp1ab R4589L 8.78e-1 B.1.617.2
V2543 13834G>T missense_variant ORF1ab_pp1ab G4612C 9.26e-1 B.1.617.2
V255 412G>T missense_variant ORF1ab_pp1a A138S 8.37e-1 B.1.617.2
V257 415G>T missense_variant ORF1ab_pp1a D139Y 7.70e-1 B.1.617.2
V2584 14030G>T missense_variant ORF1ab_pp1ab R4677L 9.26e-1 B.1.617.2
V2612 14320G>T missense_variant ORF1ab_pp1ab A4774S 8.57e-1 B.1.617.2
V2615 14351G>T missense_variant ORF1ab_pp1ab R4784L 9.00e-1 B.1.617.2
V2620 14413G>T missense_variant ORF1ab_pp1ab G4805C 8.51e-1 B.1.617.2
V2631 14530G>T missense_variant ORF1ab_pp1ab D4844Y 9.26e-1 B.1.617.2
V2632 14546G>T missense_variant ORF1ab_pp1ab R4849L 9.26e-1 B.1.617.2
V2641 14659G>T missense_variant ORF1ab_pp1ab V4887F 9.26e-1 B.1.617.2
V2652 14761G>T missense_variant ORF1ab_pp1ab A4921S 6.89e-1 B.1.617.2
V2654 14774G>T missense_variant ORF1ab_pp1ab R4925L 9.00e-1 B.1.617.2
V2656 14840G>T missense_variant ORF1ab_pp1ab R4947L 9.26e-1 B.1.617.2
V2657 14845G>T missense_variant ORF1ab_pp1ab V4949L 9.26e-1 B.1.617.2
V2660 14917G>T missense_variant ORF1ab_pp1ab A4973S 8.37e-1 B.1.617.2
V2680 15095G>T missense_variant ORF1ab_pp1ab R5032L 9.00e-1 B.1.617.2
V2687 15128G>T missense_variant ORF1ab_pp1ab R5043L 8.51e-1 B.1.617.2
V270 442G>T stop_gained ORF1ab_pp1a E148* 9.26e-1 B.1.617.2
V2702 15325G>T missense_variant ORF1ab_pp1ab D5109Y 9.26e-1 B.1.617.2
V2706 15338G>T missense_variant ORF1ab_pp1ab R5113L 9.00e-1 B.1.617.2
V2715 15415G>T missense_variant ORF1ab_pp1ab A5139S 8.01e-1 B.1.617.2
V2716 15425G>T missense_variant ORF1ab_pp1ab R5142L 8.74e-1 B.1.617.2
V2719 15457G>T missense_variant ORF1ab_pp1ab D5153Y 9.26e-1 B.1.617.2
V2743 15697G>T missense_variant ORF1ab_pp1ab G5233C 9.00e-1 B.1.617.2
V2746 15749G>T missense_variant ORF1ab_pp1ab R5250L 8.57e-1 B.1.617.2
V2747 15754G>T missense_variant ORF1ab_pp1ab V5252L 9.26e-1 B.1.617.2
V2772 16034G>T missense_variant ORF1ab_pp1ab R5345L 9.26e-1 B.1.617.2
V2796 16273G>T missense_variant ORF1ab_pp1ab D5425Y 9.01e-1 B.1.617.2
V2812 16436G>T missense_variant ORF1ab_pp1ab R5479L 7.27e-1 B.1.617.2
V2822 16505G>T missense_variant ORF1ab_pp1ab R5502L 9.00e-1 B.1.617.2
V2823 16529G>T missense_variant ORF1ab_pp1ab R5510L 8.51e-1 B.1.617.2
V2834 16607G>T missense_variant ORF1ab_pp1ab R5536L 9.26e-1 B.1.617.2
V285 512G>T missense_variant ORF1ab_pp1a R171L 9.01e-1 B.1.617.2
V287 524G>T missense_variant ORF1ab_pp1a R175L 8.37e-1 B.1.617.2
V2880 16880G>T missense_variant ORF1ab_pp1ab R5627L 9.26e-1 B.1.617.2
V2884 16909G>T missense_variant ORF1ab_pp1ab A5637S 9.26e-1 B.1.617.2
V289 535G>T stop_gained ORF1ab_pp1a G179* 9.01e-1 B.1.617.2
V2894 16982G>T missense_variant ORF1ab_pp1ab R5661L 8.78e-1 B.1.617.2
V2896 16988G>T missense_variant ORF1ab_pp1ab R5663L 9.01e-1 B.1.617.2
V2919 17173G>T missense_variant ORF1ab_pp1ab D5725Y 9.01e-1 B.1.617.2
V2923 17198G>T missense_variant ORF1ab_pp1ab R5733L 9.26e-1 B.1.617.2
V2933 17287G>T stop_gained ORF1ab_pp1ab G5763* 9.26e-1 B.1.617.2
V2935 17297G>T missense_variant ORF1ab_pp1ab R5766L 9.26e-1 B.1.617.2
V2936 17300G>T missense_variant ORF1ab_pp1ab R5767L 9.26e-1 B.1.617.2
V2956 17455G>T missense_variant ORF1ab_pp1ab V5819L 9.26e-1 B.1.617.2
V296 551G>T missense_variant ORF1ab_pp1a R184L 8.57e-1 B.1.617.2
V2960 17477G>T missense_variant ORF1ab_pp1ab R5826L 9.01e-1 B.1.617.2
V297 559G>T missense_variant ORF1ab_pp1a D187Y 9.26e-1 B.1.617.2
V2992 17753G>T missense_variant ORF1ab_pp1ab R5918L 8.19e-1 B.1.617.2
V3039 18002G>T missense_variant ORF1ab_pp1ab R6001L 9.01e-1 B.1.617.2
V3040 18004G>T stop_gained ORF1ab_pp1ab E6002* 9.26e-1 B.1.617.2
V3045 18026G>T missense_variant ORF1ab_pp1ab R6009L 9.01e-1 B.1.617.2
V3048 18043G>T missense_variant ORF1ab_pp1ab D6015Y 9.26e-1 B.1.617.2
V3049 18049G>T stop_gained ORF1ab_pp1ab E6017* 9.26e-1 B.1.617.2
V3085 18263G>T missense_variant ORF1ab_pp1ab R6088L 8.29e-1 B.1.617.2
V3102 18389G>T missense_variant ORF1ab_pp1ab R6130L 8.78e-1 B.1.617.2
V3105 18413G>T missense_variant ORF1ab_pp1ab R6138L 6.29e-1 B.1.617.2
V311 620G>T missense_variant ORF1ab_pp1a R207L 7.70e-1 B.1.617.2
V3115 18481G>T missense_variant ORF1ab_pp1ab V6161F 9.01e-1 B.1.617.2
V3130 18625G>T stop_gained ORF1ab_pp1ab E6209* 9.00e-1 B.1.617.2
V3135 18641G>T missense_variant ORF1ab_pp1ab R6214L 8.51e-1 B.1.617.2
V3187 18943G>T missense_variant ORF1ab_pp1ab D6315Y 7.32e-1 B.1.617.2
V321 649G>T stop_gained ORF1ab_pp1a E217* 9.26e-1 B.1.617.2
V3216 19202G>T missense_variant ORF1ab_pp1ab R6401L 6.55e-1 B.1.617.2
V3254 19538G>T missense_variant ORF1ab_pp1ab R6513L 9.00e-1 B.1.617.2
V3293 19769G>T missense_variant ORF1ab_pp1ab R6590L 7.42e-1 B.1.617.2
V332 695G>T missense_variant ORF1ab_pp1a R232L 9.01e-1 B.1.617.2
V3331 20027G>T missense_variant ORF1ab_pp1ab R6676L 9.26e-1 B.1.617.2
V3334 20053G>T stop_gained ORF1ab_pp1ab E6685* 9.26e-1 B.1.617.2
V3338 20062G>T missense_variant ORF1ab_pp1ab V6688F 9.26e-1 B.1.617.2
V336 731G>T missense_variant ORF1ab_pp1a R244L 9.26e-1 B.1.617.2
V3415 20527G>T missense_variant ORF1ab_pp1ab A6843S 9.26e-1 B.1.617.2
V3428 20683G>T missense_variant ORF1ab_pp1ab D6895Y 9.00e-1 B.1.617.2
V3444 20791G>T missense_variant ORF1ab_pp1ab D6931Y 9.00e-1 B.1.617.2
V3462 20893G>T missense_variant ORF1ab_pp1ab V6965L 8.74e-1 B.1.617.2
V3487 21041G>T missense_variant ORF1ab_pp1ab R7014L 6.37e-1 B.1.617.2
V3488 21043G>T stop_gained ORF1ab_pp1ab E7015* 8.16e-1 B.1.617.2
V3517 -5G>T upstream_gene_variant S None 8.73e-1 B.1.617.2
V3562 101G>T missense_variant S R34L 6.08e-1 B.1.617.2
V3621 367G>T missense_variant S A123S 7.51e-1 B.1.617.2
V370 902G>T missense_variant ORF1ab_pp1a R301L 8.01e-1 B.1.617.2
V38 -114G>T upstream_gene_variant ORF1ab_pp1a None 8.47e-1 B.1.617.2
V3959 1730G>T missense_variant S R577L 8.78e-1 B.1.617.2
V396 1003G>T missense_variant ORF1ab_pp1a D335Y 6.17e-1 B.1.617.2
V3985 1901G>T missense_variant S R634L 9.01e-1 B.1.617.2
V3991 1937G>T missense_variant S R646L 8.57e-1 B.1.617.2
V4005 2014G>T missense_variant S A672S 9.01e-1 B.1.617.2
V401 1024G>T stop_gained ORF1ab_pp1a E342* 9.01e-1 B.1.617.2
V4029 2054G>T missense_variant S R685L 9.26e-1 B.1.617.2
V41 -101G>T upstream_gene_variant ORF1ab_pp1a None 8.01e-1 B.1.617.2
V4109 2569G>T missense_variant S G857C 8.29e-1 B.1.617.2
V4150 2948G>T missense_variant S R983L 9.26e-1 B.1.617.2
V4235 3554G>T missense_variant S R1185L 6.37e-1 B.1.617.2
V4244 3595G>T missense_variant S D1199Y 6.77e-1 B.1.617.2
V4302 -6G>T upstream_gene_variant ORF3a None 9.01e-1 B.1.617.2
V437 1156G>T stop_gained ORF1ab_pp1a E386* 8.74e-1 B.1.617.2
V4379 130G>T stop_gained ORF3a G44* 9.00e-1 B.1.617.2
V4391 148G>T missense_variant ORF3a V50F 7.56e-1 B.1.617.2
V446 1193G>T missense_variant ORF1ab_pp1a R398L 8.29e-1 B.1.617.2
V453 1205G>T missense_variant ORF1ab_pp1a R402L 9.00e-1 B.1.617.2
V4614 751G>T missense_variant ORF3a G251C 8.57e-1 B.1.617.2
V464 1277G>T missense_variant ORF1ab_pp1a R426L 8.19e-1 B.1.617.2
V4652 817G>T missense_variant ORF3a V273L 6.55e-1 B.1.617.2
V4672 70G>T missense_variant E V24L 7.70e-1 B.1.617.2
V4686 182G>T missense_variant E R61L 7.70e-1 B.1.617.2
V469 1285G>T missense_variant ORF1ab_pp1a A429S 8.19e-1 B.1.617.2
V4782 473G>T missense_variant M R158L 7.05e-1 B.1.617.2
V4784 521G>T missense_variant M R174L 7.14e-1 B.1.617.2
V4788 593G>T missense_variant M R198L 9.00e-1 B.1.617.2
V4800 13G>T missense_variant ORF6 V5F 7.17e-1 B.1.617.2
V484 1330G>T stop_gained ORF1ab_pp1a E444* 9.01e-1 B.1.617.2
V4864 37G>T missense_variant ORF7a A13S 6.89e-1 B.1.617.2
V5056 127G>T missense_variant ORF7b A43S 8.02e-1 B.1.617.2
V5061 -4G>T upstream_gene_variant ORF8 None 7.05e-1 B.1.617.2
V511 1420G>T missense_variant ORF1ab_pp1a A474S 8.78e-1 B.1.617.2
V5173 223G>T missense_variant ORF8 D75Y 6.37e-1 B.1.617.2
V5209 340G>T missense_variant ORF8 V114F 7.32e-1 B.1.617.2
V5234 -12G>T upstream_gene_variant N None 7.89e-1 B.1.617.2
V5266 29G>T missense_variant N R10L 8.01e-1 B.1.617.2
V5277 41G>T missense_variant N R14L 6.21e-1 B.1.617.2
V5324 107G>T missense_variant N R36L 7.29e-1 B.1.617.2
V5345 203G>T missense_variant N R68L 9.26e-1 B.1.617.2
V5349 214G>T missense_variant N V72F 9.26e-1 B.1.617.2
V5355 263G>T missense_variant N R88L 8.73e-1 B.1.617.2
V5359 278G>T missense_variant N R93L 8.74e-1 B.1.617.2
V5361 284G>T missense_variant N R95L 8.74e-1 B.1.617.2
V5364 295G>T missense_variant N G99C 8.29e-1 B.1.617.2
V5379 385G>T missense_variant N G129C 8.37e-1 B.1.617.2
V5395 446G>T missense_variant N R149L 8.74e-1 B.1.617.2
V5404 472G>T missense_variant N V158L 7.42e-1 B.1.617.2
V5414 517G>T missense_variant N A173S 8.19e-1 B.1.617.2
V5419 535G>T missense_variant N G179C 7.17e-1 B.1.617.2
V5429 554G>T missense_variant N R185L 8.19e-1 B.1.617.2
V5434 566G>T missense_variant N R189L 7.86e-1 B.1.617.2
V5437 572G>T missense_variant N R191L 7.29e-1 B.1.617.2
V5536 776G>T missense_variant N R259L 9.01e-1 B.1.617.2
V5537 785G>T missense_variant N R262L 9.26e-1 B.1.617.2
V554 1625G>T missense_variant ORF1ab_pp1a R542L 7.17e-1 B.1.617.2
V5546 823G>T missense_variant N G275C 8.37e-1 B.1.617.2
V5547 830G>T missense_variant N R277L 9.26e-1 B.1.617.2
V556 1634G>T missense_variant ORF1ab_pp1a R545L 8.37e-1 B.1.617.2
V5565 931G>T missense_variant N A311S 6.64e-1 B.1.617.2
V5566 946G>T stop_gained N G316* 9.01e-1 B.1.617.2
V5570 956G>T missense_variant N R319L 9.26e-1 B.1.617.2
V563 1649G>T missense_variant ORF1ab_pp1a R550L 9.26e-1 B.1.617.2
V5688 16G>T missense_variant ORF10 V6F 7.42e-1 B.1.617.2
V574 1679G>T missense_variant ORF1ab_pp1a R560L 8.19e-1 B.1.617.2
V581 1696G>T missense_variant ORF1ab_pp1a A566S 8.19e-1 B.1.617.2
V5970 726G>T synonymous_variant ORF1ab_pp1a T242T 6.94e-1 B.1.617.2
V6121 1830G>T synonymous_variant ORF1ab_pp1a S610S 8.78e-1 B.1.617.2
V6165 2133G>T synonymous_variant ORF1ab_pp1a T711T 7.29e-1 B.1.617.2
V643 1933G>T missense_variant ORF1ab_pp1a G645C 7.86e-1 B.1.617.2
V657 1981G>T missense_variant ORF1ab_pp1a G661C 8.37e-1 B.1.617.2
V6634 5592G>T synonymous_variant ORF1ab_pp1a T1864T 7.91e-1 B.1.617.2
V6686 6006G>T synonymous_variant ORF1ab_pp1a T2002T 8.29e-1 B.1.617.2
V6704 6099G>T synonymous_variant ORF1ab_pp1a A2033A 6.68e-1 B.1.617.2
V6908 7791G>T synonymous_variant ORF1ab_pp1a T2597T 8.57e-1 B.1.617.2
V6952 8103G>T synonymous_variant ORF1ab_pp1a A2701A 6.74e-1 B.1.617.2
V7140 9606G>T synonymous_variant ORF1ab_pp1a T3202T 9.01e-1 B.1.617.2
V747 2359G>T missense_variant ORF1ab_pp1a G787W 9.00e-1 B.1.617.2
V752 2374G>T stop_gained ORF1ab_pp1a E792* 9.00e-1 B.1.617.2
V7567 12975G>T synonymous_variant ORF1ab_pp1a S4325S 8.02e-1 B.1.617.2
V7604 13239G>T synonymous_variant ORF1ab_pp1ab P4413P 6.84e-1 B.1.617.2
V762 2452G>T missense_variant ORF1ab_pp1a G818C 9.26e-1 B.1.617.2
V7699 14004G>T synonymous_variant ORF1ab_pp1ab T4668T 7.17e-1 B.1.617.2
V7751 14358G>T synonymous_variant ORF1ab_pp1ab T4786T 6.46e-1 B.1.617.2
V782 2593G>T missense_variant ORF1ab_pp1a G865C 8.57e-1 B.1.617.2
V787 2614G>T missense_variant ORF1ab_pp1a A872S 7.56e-1 B.1.617.2
V7951 15957G>T synonymous_variant ORF1ab_pp1ab P5319P 7.56e-1 B.1.617.2
V8252 18198G>T synonymous_variant ORF1ab_pp1ab P6066P 7.05e-1 B.1.617.2
V8328 18696G>T synonymous_variant ORF1ab_pp1ab A6232A 6.46e-1 B.1.617.2
V8502 20205G>T synonymous_variant ORF1ab_pp1ab A6735A 9.01e-1 B.1.617.2
V8519 20406G>T synonymous_variant ORF1ab_pp1ab A6802A 8.78e-1 B.1.617.2
V8711 624G>T synonymous_variant S T208T 6.72e-1 B.1.617.2
V882 2977G>T missense_variant ORF1ab_pp1a G993C 6.94e-1 B.1.617.2
V9253 801G>T synonymous_variant ORF3a P267P 9.01e-1 B.1.617.2
V9262 18G>T synonymous_variant E S6S 6.74e-1 B.1.617.2
V9274 108G>T synonymous_variant E A36A 8.02e-1 B.1.617.2
V9596 150G>T synonymous_variant N A50A 8.51e-1 B.1.617.2
V978 3319G>T stop_gained ORF1ab_pp1a G1107* 9.26e-1 B.1.617.2
V988 3355G>T missense_variant ORF1ab_pp1a G1119C 6.21e-1 B.1.617.2
V1002 3424G>T stop_gained ORF1ab_pp1a E1142* 7.07e-1 B.1
V1409 6032G>T missense_variant ORF1ab_pp1a R2011L 7.07e-1 B.1
V2358 12449G>T missense_variant ORF1ab_pp1a R4150L 7.07e-1 B.1
V2362 12469G>T missense_variant ORF1ab_pp1a G4157C 7.07e-1 B.1
V2438 13114G>T missense_variant ORF1ab_pp1a V4372F 7.07e-1 B.1
V2445 13160G>T missense_variant ORF1ab_pp1a R4387L 7.07e-1 B.1
V2680 15095G>T missense_variant ORF1ab_pp1ab R5032L 7.07e-1 B.1
V2716 15425G>T missense_variant ORF1ab_pp1ab R5142L 7.07e-1 B.1
V3123 18568G>T missense_variant ORF1ab_pp1ab G6190C 7.07e-1 B.1
V3216 19202G>T missense_variant ORF1ab_pp1ab R6401L 7.07e-1 B.1
V3428 20683G>T missense_variant ORF1ab_pp1ab D6895Y 7.07e-1 B.1
V3444 20791G>T missense_variant ORF1ab_pp1ab D6931Y 7.07e-1 B.1
V3959 1730G>T missense_variant S R577L 7.07e-1 B.1
V4150 2948G>T missense_variant S R983L 7.07e-1 B.1
V6686 6006G>T synonymous_variant ORF1ab_pp1a T2002T 7.07e-1 B.1
V9274 108G>T synonymous_variant E A36A 7.07e-1 B.1
V1002 3424G>T stop_gained ORF1ab_pp1a E1142* 1.00e+0 BA.1.1.1
V1026 3509G>T missense_variant ORF1ab_pp1a R1170L 1.00e+0 BA.1.1.1
V103 -20G>T upstream_gene_variant ORF1ab_pp1a None 1.00e+0 BA.1.1.1
V1047 3610G>T missense_variant ORF1ab_pp1a A1204S 1.00e+0 BA.1.1.1
V111 -10G>T upstream_gene_variant ORF1ab_pp1a None 7.75e-1 BA.1.1.1
V1133 4127G>T missense_variant ORF1ab_pp1a R1376L 1.00e+0 BA.1.1.1
V1139 4157G>T missense_variant ORF1ab_pp1a R1386L 1.00e+0 BA.1.1.1
V1146 4211G>T missense_variant ORF1ab_pp1a R1404L 1.00e+0 BA.1.1.1
V1159 4318G>T missense_variant ORF1ab_pp1a D1440Y 1.00e+0 BA.1.1.1
V1164 4391G>T missense_variant ORF1ab_pp1a R1464L 1.00e+0 BA.1.1.1
V118 28G>T stop_gained ORF1ab_pp1a E10* 1.00e+0 BA.1.1.1
V120 40G>T missense_variant ORF1ab_pp1a V14F 1.00e+0 BA.1.1.1
V124 71G>T missense_variant ORF1ab_pp1a R24L 1.00e+0 BA.1.1.1
V125 73G>T missense_variant ORF1ab_pp1a D25Y 1.00e+0 BA.1.1.1
V1252 4883G>T missense_variant ORF1ab_pp1a R1628L 7.75e-1 BA.1.1.1
V126 76G>T missense_variant ORF1ab_pp1a V26L 8.66e-1 BA.1.1.1
V130 82G>T missense_variant ORF1ab_pp1a V28L 8.66e-1 BA.1.1.1
V132 86G>T missense_variant ORF1ab_pp1a R29L 1.00e+0 BA.1.1.1
V1345 5548G>T missense_variant ORF1ab_pp1a G1850C 1.00e+0 BA.1.1.1
V1374 5767G>T missense_variant ORF1ab_pp1a A1923S 1.00e+0 BA.1.1.1
V139 103G>T missense_variant ORF1ab_pp1a V35L 8.66e-1 BA.1.1.1
V1409 6032G>T missense_variant ORF1ab_pp1a R2011L 1.00e+0 BA.1.1.1
V1432 6097G>T missense_variant ORF1ab_pp1a A2033S 7.75e-1 BA.1.1.1
V1439 6124G>T stop_gained ORF1ab_pp1a E2042* 1.00e+0 BA.1.1.1
V1458 6181G>T missense_variant ORF1ab_pp1a V2061F 7.07e-1 BA.1.1.1
V146 128G>T missense_variant ORF1ab_pp1a R43L 1.00e+0 BA.1.1.1
V1464 6208G>T stop_gained ORF1ab_pp1a E2070* 1.00e+0 BA.1.1.1
V1544 6476G>T missense_variant ORF1ab_pp1a R2159L 1.00e+0 BA.1.1.1
V1546 6488G>T missense_variant ORF1ab_pp1a R2163L 1.00e+0 BA.1.1.1
V1565 6619G>T missense_variant ORF1ab_pp1a G2207C 1.00e+0 BA.1.1.1
V1578 6742G>T missense_variant ORF1ab_pp1a A2248S 1.00e+0 BA.1.1.1
V162 178G>T missense_variant ORF1ab_pp1a V60F 1.00e+0 BA.1.1.1
V1644 7207G>T missense_variant ORF1ab_pp1a G2403C 1.00e+0 BA.1.1.1
V1649 7244G>T missense_variant ORF1ab_pp1a R2415L 1.00e+0 BA.1.1.1
V1651 7264G>T stop_gained ORF1ab_pp1a E2422* 1.00e+0 BA.1.1.1
V1662 7471G>T missense_variant ORF1ab_pp1a V2491F 1.00e+0 BA.1.1.1
V168 218G>T missense_variant ORF1ab_pp1a R73L 1.00e+0 BA.1.1.1
V1712 7783G>T missense_variant ORF1ab_pp1a V2595F 1.00e+0 BA.1.1.1
V1716 7810G>T missense_variant ORF1ab_pp1a V2604L 1.00e+0 BA.1.1.1
V1743 7913G>T missense_variant ORF1ab_pp1a R2638L 1.00e+0 BA.1.1.1
V175 230G>T missense_variant ORF1ab_pp1a R77L 1.00e+0 BA.1.1.1
V1753 8002G>T missense_variant ORF1ab_pp1a D2668Y 1.00e+0 BA.1.1.1
V1760 8057G>T missense_variant ORF1ab_pp1a R2686L 1.00e+0 BA.1.1.1
V1766 8090G>T missense_variant ORF1ab_pp1a R2697L 1.00e+0 BA.1.1.1
V1774 8143G>T missense_variant ORF1ab_pp1a V2715F 8.66e-1 BA.1.1.1
V1777 8177G>T missense_variant ORF1ab_pp1a R2726L 1.00e+0 BA.1.1.1
V1778 8189G>T missense_variant ORF1ab_pp1a R2730L 1.00e+0 BA.1.1.1
V1819 8453G>T missense_variant ORF1ab_pp1a R2818L 1.00e+0 BA.1.1.1
V1829 8522G>T missense_variant ORF1ab_pp1a R2841L 1.00e+0 BA.1.1.1
V1846 8596G>T missense_variant ORF1ab_pp1a V2866L 1.00e+0 BA.1.1.1
V1857 8624G>T missense_variant ORF1ab_pp1a R2875L 1.00e+0 BA.1.1.1
V1883 8846G>T missense_variant ORF1ab_pp1a R2949L 1.00e+0 BA.1.1.1
V1886 8858G>T missense_variant ORF1ab_pp1a R2953L 1.00e+0 BA.1.1.1
V1900 8959G>T missense_variant ORF1ab_pp1a G2987C 1.00e+0 BA.1.1.1
V1961 9491G>T missense_variant ORF1ab_pp1a R3164L 1.00e+0 BA.1.1.1
V1964 9581G>T missense_variant ORF1ab_pp1a R3194L 1.00e+0 BA.1.1.1
V1993 9874G>T missense_variant ORF1ab_pp1a G3292C 1.00e+0 BA.1.1.1
V1997 9892G>T missense_variant ORF1ab_pp1a V3298L 8.66e-1 BA.1.1.1
V2005 9968G>T missense_variant ORF1ab_pp1a R3323L 1.00e+0 BA.1.1.1
V2030 10103G>T missense_variant ORF1ab_pp1a R3368L 1.00e+0 BA.1.1.1
V2055 10417G>T missense_variant ORF1ab_pp1a A3473S 1.00e+0 BA.1.1.1
V2060 10454G>T missense_variant ORF1ab_pp1a R3485L 1.00e+0 BA.1.1.1
V207 277G>T stop_gained ORF1ab_pp1a E93* 1.00e+0 BA.1.1.1
V2079 10570G>T missense_variant ORF1ab_pp1a V3524F 1.00e+0 BA.1.1.1
V2087 10625G>T missense_variant ORF1ab_pp1a R3542L 1.00e+0 BA.1.1.1
V212 292G>T missense_variant ORF1ab_pp1a G98C 7.75e-1 BA.1.1.1
V215 296G>T missense_variant ORF1ab_pp1a R99L 8.66e-1 BA.1.1.1
V2151 10985G>T missense_variant ORF1ab_pp1a R3662L 7.75e-1 BA.1.1.1
V2238 11405G>T missense_variant ORF1ab_pp1a R3802L 8.66e-1 BA.1.1.1
V228 337G>T stop_gained ORF1ab_pp1a E113* 1.00e+0 BA.1.1.1
V2310 11978G>T missense_variant ORF1ab_pp1a R3993L 1.00e+0 BA.1.1.1
V2313 11996G>T missense_variant ORF1ab_pp1a R3999L 1.00e+0 BA.1.1.1
V2358 12449G>T missense_variant ORF1ab_pp1a R4150L 1.00e+0 BA.1.1.1
V2362 12469G>T missense_variant ORF1ab_pp1a G4157C 1.00e+0 BA.1.1.1
V2386 12559G>T missense_variant ORF1ab_pp1a D4187Y 1.00e+0 BA.1.1.1
V239 356G>T missense_variant ORF1ab_pp1a R119L 1.00e+0 BA.1.1.1
V2406 12752G>T missense_variant ORF1ab_pp1a R4251L 1.00e+0 BA.1.1.1
V2424 12992G>T missense_variant ORF1ab_pp1a R4331L 1.00e+0 BA.1.1.1
V243 371G>T missense_variant ORF1ab_pp1a R124L 1.00e+0 BA.1.1.1
V2438 13114G>T missense_variant ORF1ab_pp1a V4372F 1.00e+0 BA.1.1.1
V2439 13120G>T missense_variant ORF1ab_pp1a G4374C 6.12e-1 BA.1.1.1
V2445 13160G>T missense_variant ORF1ab_pp1a R4387L 1.00e+0 BA.1.1.1
V2446 13162G>T stop_gained ORF1ab_pp1a E4388* 1.00e+0 BA.1.1.1
V245 379G>T missense_variant ORF1ab_pp1a G127C 1.00e+0 BA.1.1.1
V2452 13204G>T missense_variant ORF1ab_pp1a G4402W 1.00e+0 BA.1.1.1
V2453 13213G>T missense_variant ORF1ab_pp1ab G4405C 1.00e+0 BA.1.1.1
V2456 13229G>T missense_variant ORF1ab_pp1ab R4410L 1.00e+0 BA.1.1.1
V2459 13243G>T missense_variant ORF1ab_pp1ab G4415C 1.00e+0 BA.1.1.1
V2463 13267G>T missense_variant ORF1ab_pp1ab V4423L 1.00e+0 BA.1.1.1
V2470 13340G>T missense_variant ORF1ab_pp1ab R4447L 1.00e+0 BA.1.1.1
V2474 13357G>T stop_gained ORF1ab_pp1ab E4453* 1.00e+0 BA.1.1.1
V2496 13498G>T missense_variant ORF1ab_pp1ab G4500C 7.75e-1 BA.1.1.1
V2500 13523G>T missense_variant ORF1ab_pp1ab R4508L 1.00e+0 BA.1.1.1
V2503 13529G>T missense_variant ORF1ab_pp1ab R4510L 1.00e+0 BA.1.1.1
V2507 13558G>T missense_variant ORF1ab_pp1ab V4520F 1.00e+0 BA.1.1.1
V251 409G>T missense_variant ORF1ab_pp1a G137C 1.00e+0 BA.1.1.1
V2528 13694G>T missense_variant ORF1ab_pp1ab R4565L 1.00e+0 BA.1.1.1
V2529 13696G>T missense_variant ORF1ab_pp1ab V4566L 1.00e+0 BA.1.1.1
V2532 13702G>T missense_variant ORF1ab_pp1ab A4568S 1.00e+0 BA.1.1.1
V2534 13718G>T missense_variant ORF1ab_pp1ab R4573L 1.00e+0 BA.1.1.1
V2535 13724G>T missense_variant ORF1ab_pp1ab R4575L 1.00e+0 BA.1.1.1
V2540 13766G>T missense_variant ORF1ab_pp1ab R4589L 1.00e+0 BA.1.1.1
V2543 13834G>T missense_variant ORF1ab_pp1ab G4612C 1.00e+0 BA.1.1.1
V255 412G>T missense_variant ORF1ab_pp1a A138S 1.00e+0 BA.1.1.1
V257 415G>T missense_variant ORF1ab_pp1a D139Y 1.00e+0 BA.1.1.1
V2584 14030G>T missense_variant ORF1ab_pp1ab R4677L 1.00e+0 BA.1.1.1
V2612 14320G>T missense_variant ORF1ab_pp1ab A4774S 1.00e+0 BA.1.1.1
V2615 14351G>T missense_variant ORF1ab_pp1ab R4784L 1.00e+0 BA.1.1.1
V2620 14413G>T missense_variant ORF1ab_pp1ab G4805C 1.00e+0 BA.1.1.1
V2631 14530G>T missense_variant ORF1ab_pp1ab D4844Y 1.00e+0 BA.1.1.1
V2632 14546G>T missense_variant ORF1ab_pp1ab R4849L 1.00e+0 BA.1.1.1
V2641 14659G>T missense_variant ORF1ab_pp1ab V4887F 1.00e+0 BA.1.1.1
V2654 14774G>T missense_variant ORF1ab_pp1ab R4925L 1.00e+0 BA.1.1.1
V2656 14840G>T missense_variant ORF1ab_pp1ab R4947L 1.00e+0 BA.1.1.1
V2657 14845G>T missense_variant ORF1ab_pp1ab V4949L 1.00e+0 BA.1.1.1
V2660 14917G>T missense_variant ORF1ab_pp1ab A4973S 1.00e+0 BA.1.1.1
V2680 15095G>T missense_variant ORF1ab_pp1ab R5032L 1.00e+0 BA.1.1.1
V2687 15128G>T missense_variant ORF1ab_pp1ab R5043L 1.00e+0 BA.1.1.1
V269 439G>T missense_variant ORF1ab_pp1a D147Y 1.00e+0 BA.1.1.1
V270 442G>T stop_gained ORF1ab_pp1a E148* 1.00e+0 BA.1.1.1
V2702 15325G>T missense_variant ORF1ab_pp1ab D5109Y 1.00e+0 BA.1.1.1
V2706 15338G>T missense_variant ORF1ab_pp1ab R5113L 1.00e+0 BA.1.1.1
V2715 15415G>T missense_variant ORF1ab_pp1ab A5139S 6.55e-1 BA.1.1.1
V2716 15425G>T missense_variant ORF1ab_pp1ab R5142L 1.00e+0 BA.1.1.1
V2719 15457G>T missense_variant ORF1ab_pp1ab D5153Y 1.00e+0 BA.1.1.1
V2743 15697G>T missense_variant ORF1ab_pp1ab G5233C 1.00e+0 BA.1.1.1
V2746 15749G>T missense_variant ORF1ab_pp1ab R5250L 1.00e+0 BA.1.1.1
V2747 15754G>T missense_variant ORF1ab_pp1ab V5252L 1.00e+0 BA.1.1.1
V2772 16034G>T missense_variant ORF1ab_pp1ab R5345L 1.00e+0 BA.1.1.1
V2796 16273G>T missense_variant ORF1ab_pp1ab D5425Y 1.00e+0 BA.1.1.1
V2812 16436G>T missense_variant ORF1ab_pp1ab R5479L 1.00e+0 BA.1.1.1
V2822 16505G>T missense_variant ORF1ab_pp1ab R5502L 1.00e+0 BA.1.1.1
V2823 16529G>T missense_variant ORF1ab_pp1ab R5510L 1.00e+0 BA.1.1.1
V2834 16607G>T missense_variant ORF1ab_pp1ab R5536L 1.00e+0 BA.1.1.1
V285 512G>T missense_variant ORF1ab_pp1a R171L 1.00e+0 BA.1.1.1
V287 524G>T missense_variant ORF1ab_pp1a R175L 1.00e+0 BA.1.1.1
V2880 16880G>T missense_variant ORF1ab_pp1ab R5627L 1.00e+0 BA.1.1.1
V2884 16909G>T missense_variant ORF1ab_pp1ab A5637S 1.00e+0 BA.1.1.1
V289 535G>T stop_gained ORF1ab_pp1a G179* 1.00e+0 BA.1.1.1
V2894 16982G>T missense_variant ORF1ab_pp1ab R5661L 1.00e+0 BA.1.1.1
V2896 16988G>T missense_variant ORF1ab_pp1ab R5663L 1.00e+0 BA.1.1.1
V2919 17173G>T missense_variant ORF1ab_pp1ab D5725Y 1.00e+0 BA.1.1.1
V2923 17198G>T missense_variant ORF1ab_pp1ab R5733L 1.00e+0 BA.1.1.1
V2933 17287G>T stop_gained ORF1ab_pp1ab G5763* 1.00e+0 BA.1.1.1
V2935 17297G>T missense_variant ORF1ab_pp1ab R5766L 8.66e-1 BA.1.1.1
V2936 17300G>T missense_variant ORF1ab_pp1ab R5767L 1.00e+0 BA.1.1.1
V2956 17455G>T missense_variant ORF1ab_pp1ab V5819L 1.00e+0 BA.1.1.1
V296 551G>T missense_variant ORF1ab_pp1a R184L 1.00e+0 BA.1.1.1
V2960 17477G>T missense_variant ORF1ab_pp1ab R5826L 1.00e+0 BA.1.1.1
V297 559G>T missense_variant ORF1ab_pp1a D187Y 1.00e+0 BA.1.1.1
V2992 17753G>T missense_variant ORF1ab_pp1ab R5918L 1.00e+0 BA.1.1.1
V3016 17899A>T missense_variant ORF1ab_pp1ab I5967L 8.66e-1 BA.1.1.1
V3039 18002G>T missense_variant ORF1ab_pp1ab R6001L 7.75e-1 BA.1.1.1
V3040 18004G>T stop_gained ORF1ab_pp1ab E6002* 1.00e+0 BA.1.1.1
V3045 18026G>T missense_variant ORF1ab_pp1ab R6009L 1.00e+0 BA.1.1.1
V3048 18043G>T missense_variant ORF1ab_pp1ab D6015Y 1.00e+0 BA.1.1.1
V3049 18049G>T stop_gained ORF1ab_pp1ab E6017* 1.00e+0 BA.1.1.1
V3085 18263G>T missense_variant ORF1ab_pp1ab R6088L 1.00e+0 BA.1.1.1
V3092 18319G>T missense_variant ORF1ab_pp1ab V6107L 1.00e+0 BA.1.1.1
V3102 18389G>T missense_variant ORF1ab_pp1ab R6130L 1.00e+0 BA.1.1.1
V3105 18413G>T missense_variant ORF1ab_pp1ab R6138L 7.75e-1 BA.1.1.1
V311 620G>T missense_variant ORF1ab_pp1a R207L 1.00e+0 BA.1.1.1
V3115 18481G>T missense_variant ORF1ab_pp1ab V6161F 8.66e-1 BA.1.1.1
V3130 18625G>T stop_gained ORF1ab_pp1ab E6209* 1.00e+0 BA.1.1.1
V3135 18641G>T missense_variant ORF1ab_pp1ab R6214L 8.66e-1 BA.1.1.1
V3187 18943G>T missense_variant ORF1ab_pp1ab D6315Y 8.66e-1 BA.1.1.1
V321 649G>T stop_gained ORF1ab_pp1a E217* 1.00e+0 BA.1.1.1
V3216 19202G>T missense_variant ORF1ab_pp1ab R6401L 1.00e+0 BA.1.1.1
V3220 19261G>T missense_variant ORF1ab_pp1ab D6421Y 8.66e-1 BA.1.1.1
V3254 19538G>T missense_variant ORF1ab_pp1ab R6513L 1.00e+0 BA.1.1.1
V3293 19769G>T missense_variant ORF1ab_pp1ab R6590L 8.66e-1 BA.1.1.1
V332 695G>T missense_variant ORF1ab_pp1a R232L 1.00e+0 BA.1.1.1
V3331 20027G>T missense_variant ORF1ab_pp1ab R6676L 1.00e+0 BA.1.1.1
V3334 20053G>T stop_gained ORF1ab_pp1ab E6685* 1.00e+0 BA.1.1.1
V3338 20062G>T missense_variant ORF1ab_pp1ab V6688F 1.00e+0 BA.1.1.1
V3345 20126G>T missense_variant ORF1ab_pp1ab R6709L 1.00e+0 BA.1.1.1
V336 731G>T missense_variant ORF1ab_pp1a R244L 1.00e+0 BA.1.1.1
V3415 20527G>T missense_variant ORF1ab_pp1ab A6843S 1.00e+0 BA.1.1.1
V3428 20683G>T missense_variant ORF1ab_pp1ab D6895Y 1.00e+0 BA.1.1.1
V3444 20791G>T missense_variant ORF1ab_pp1ab D6931Y 1.00e+0 BA.1.1.1
V3462 20893G>T missense_variant ORF1ab_pp1ab V6965L 1.00e+0 BA.1.1.1
V3475 20956G>T missense_variant ORF1ab_pp1ab A6986S 7.75e-1 BA.1.1.1
V3487 21041G>T missense_variant ORF1ab_pp1ab R7014L 1.00e+0 BA.1.1.1
V3488 21043G>T stop_gained ORF1ab_pp1ab E7015* 1.00e+0 BA.1.1.1
V3517 -5G>T upstream_gene_variant S None 1.00e+0 BA.1.1.1
V3562 101G>T missense_variant S R34L 1.00e+0 BA.1.1.1
V3621 367G>T missense_variant S A123S 1.00e+0 BA.1.1.1
V370 902G>T missense_variant ORF1ab_pp1a R301L 1.00e+0 BA.1.1.1
V3737 641G>T missense_variant S R214L 7.75e-1 BA.1.1.1
V38 -114G>T upstream_gene_variant ORF1ab_pp1a None 8.66e-1 BA.1.1.1
V3822 1030G>T missense_variant S A344S 1.00e+0 BA.1.1.1
V3923 1478A>T missense_variant S Q493L 7.75e-1 BA.1.1.1
V3959 1730G>T missense_variant S R577L 1.00e+0 BA.1.1.1
V396 1003G>T missense_variant ORF1ab_pp1a D335Y 1.00e+0 BA.1.1.1
V3985 1901G>T missense_variant S R634L 1.00e+0 BA.1.1.1
V3991 1937G>T missense_variant S R646L 1.00e+0 BA.1.1.1
V4005 2014G>T missense_variant S A672S 1.00e+0 BA.1.1.1
V401 1024G>T stop_gained ORF1ab_pp1a E342* 1.00e+0 BA.1.1.1
V4025 2045G>T missense_variant S R682L 1.00e+0 BA.1.1.1
V4026 2048G>T missense_variant S R683L 8.66e-1 BA.1.1.1
V4029 2054G>T missense_variant S R685L 1.00e+0 BA.1.1.1
V4065 2294G>T missense_variant S R765L 7.75e-1 BA.1.1.1
V41 -101G>T upstream_gene_variant ORF1ab_pp1a None 8.66e-1 BA.1.1.1
V4150 2948G>T missense_variant S R983L 1.00e+0 BA.1.1.1
V4185 3272G>T missense_variant S R1091L 8.66e-1 BA.1.1.1
V4235 3554G>T missense_variant S R1185L 1.00e+0 BA.1.1.1
V4244 3595G>T missense_variant S D1199Y 1.00e+0 BA.1.1.1
V4289 3778G>T missense_variant S D1260Y 8.66e-1 BA.1.1.1
V4302 -6G>T upstream_gene_variant ORF3a None 1.00e+0 BA.1.1.1
V4345 89G>T missense_variant ORF3a R30L 8.66e-1 BA.1.1.1
V4347 91G>T missense_variant ORF3a A31S 1.00e+0 BA.1.1.1
V437 1156G>T stop_gained ORF1ab_pp1a E386* 1.00e+0 BA.1.1.1
V4379 130G>T stop_gained ORF3a G44* 8.66e-1 BA.1.1.1
V4391 148G>T missense_variant ORF3a V50F 7.07e-1 BA.1.1.1
V4410 175G>T missense_variant ORF3a A59S 7.75e-1 BA.1.1.1
V4459 289G>T missense_variant ORF3a V97F 1.00e+0 BA.1.1.1
V4512 401G>T missense_variant ORF3a R134L 7.75e-1 BA.1.1.1
V453 1205G>T missense_variant ORF1ab_pp1a R402L 1.00e+0 BA.1.1.1
V4614 751G>T missense_variant ORF3a G251C 1.00e+0 BA.1.1.1
V4620 760G>T stop_gained ORF3a G254* 6.55e-1 BA.1.1.1
V464 1277G>T missense_variant ORF1ab_pp1a R426L 8.66e-1 BA.1.1.1
V4672 70G>T missense_variant E V24L 1.00e+0 BA.1.1.1
V469 1285G>T missense_variant ORF1ab_pp1a A429S 1.00e+0 BA.1.1.1
V4722 16G>T missense_variant M G6C 1.00e+0 BA.1.1.1
V4757 232G>T missense_variant M G78C 8.66e-1 BA.1.1.1
V4763 247G>T missense_variant M A83S 8.66e-1 BA.1.1.1
V4772 320G>T missense_variant M R107L 1.00e+0 BA.1.1.1
V4812 59G>T missense_variant ORF6 R20M 8.66e-1 BA.1.1.1
V484 1330G>T stop_gained ORF1ab_pp1a E444* 1.00e+0 BA.1.1.1
V4864 37G>T missense_variant ORF7a A13S 1.00e+0 BA.1.1.1
V4895 121G>T stop_gained ORF7a E41* 7.75e-1 BA.1.1.1
V4930 208G>T missense_variant ORF7a G70C 7.07e-1 BA.1.1.1
V4937 220G>T missense_variant ORF7a V74F 6.55e-1 BA.1.1.1
V4943 233G>T missense_variant ORF7a R78L 1.00e+0 BA.1.1.1
V5056 127G>T missense_variant ORF7b A43S 8.66e-1 BA.1.1.1
V5061 -4G>T upstream_gene_variant ORF8 None 8.66e-1 BA.1.1.1
V511 1420G>T missense_variant ORF1ab_pp1a A474S 1.00e+0 BA.1.1.1
V5173 223G>T missense_variant ORF8 D75Y 7.75e-1 BA.1.1.1
V5176 229G>T missense_variant ORF8 G77C 8.66e-1 BA.1.1.1
V5196 302G>T missense_variant ORF8 R101L 1.00e+0 BA.1.1.1
V5209 340G>T missense_variant ORF8 V114F 1.00e+0 BA.1.1.1
V5212 344G>T missense_variant ORF8 R115L 7.07e-1 BA.1.1.1
V5234 -12G>T upstream_gene_variant N None 1.00e+0 BA.1.1.1
V5266 29G>T missense_variant N R10L 8.16e-1 BA.1.1.1
V5277 41G>T missense_variant N R14L 8.16e-1 BA.1.1.1
V5345 203G>T missense_variant N R68L 8.66e-1 BA.1.1.1
V5349 214G>T missense_variant N V72F 1.00e+0 BA.1.1.1
V5355 263G>T missense_variant N R88L 1.00e+0 BA.1.1.1
V5359 278G>T missense_variant N R93L 1.00e+0 BA.1.1.1
V5361 284G>T missense_variant N R95L 1.00e+0 BA.1.1.1
V5364 295G>T missense_variant N G99C 1.00e+0 BA.1.1.1
V5379 385G>T missense_variant N G129C 1.00e+0 BA.1.1.1
V5395 446G>T missense_variant N R149L 1.00e+0 BA.1.1.1
V5404 472G>T missense_variant N V158L 1.00e+0 BA.1.1.1
V5414 517G>T missense_variant N A173S 8.66e-1 BA.1.1.1
V5419 535G>T missense_variant N G179C 7.75e-1 BA.1.1.1
V5429 554G>T missense_variant N R185L 1.00e+0 BA.1.1.1
V5434 566G>T missense_variant N R189L 7.75e-1 BA.1.1.1
V5437 572G>T missense_variant N R191L 8.66e-1 BA.1.1.1
V5467 611G>T missense_variant N G204V 8.66e-1 BA.1.1.1
V5496 643G>T missense_variant N G215C 6.55e-1 BA.1.1.1
V5536 776G>T missense_variant N R259L 1.00e+0 BA.1.1.1
V5537 785G>T missense_variant N R262L 1.00e+0 BA.1.1.1
V554 1625G>T missense_variant ORF1ab_pp1a R542L 1.00e+0 BA.1.1.1
V5546 823G>T missense_variant N G275C 1.00e+0 BA.1.1.1
V5547 830G>T missense_variant N R277L 1.00e+0 BA.1.1.1
V556 1634G>T missense_variant ORF1ab_pp1a R545L 1.00e+0 BA.1.1.1
V5565 931G>T missense_variant N A311S 1.00e+0 BA.1.1.1
V5566 946G>T stop_gained N G316* 1.00e+0 BA.1.1.1
V5570 956G>T missense_variant N R319L 1.00e+0 BA.1.1.1
V563 1649G>T missense_variant ORF1ab_pp1a R550L 1.00e+0 BA.1.1.1
V5688 16G>T missense_variant ORF10 V6F 1.00e+0 BA.1.1.1
V5690 22G>T missense_variant ORF10 A8S 8.66e-1 BA.1.1.1
V574 1679G>T missense_variant ORF1ab_pp1a R560L 1.00e+0 BA.1.1.1
V581 1696G>T missense_variant ORF1ab_pp1a A566S 1.00e+0 BA.1.1.1
V5875 222G>T synonymous_variant ORF1ab_pp1a S74S 1.00e+0 BA.1.1.1
V5970 726G>T synonymous_variant ORF1ab_pp1a T242T 6.12e-1 BA.1.1.1
V5998 921G>T synonymous_variant ORF1ab_pp1a A307A 6.55e-1 BA.1.1.1
V6010 999G>T synonymous_variant ORF1ab_pp1a T333T 7.75e-1 BA.1.1.1
V61 -68G>T upstream_gene_variant ORF1ab_pp1a None 8.66e-1 BA.1.1.1
V6121 1830G>T synonymous_variant ORF1ab_pp1a S610S 1.00e+0 BA.1.1.1
V6165 2133G>T synonymous_variant ORF1ab_pp1a T711T 8.66e-1 BA.1.1.1
V6413 3942G>T synonymous_variant ORF1ab_pp1a A1314A 8.66e-1 BA.1.1.1
V6420 3990G>T synonymous_variant ORF1ab_pp1a P1330P 7.75e-1 BA.1.1.1
V643 1933G>T missense_variant ORF1ab_pp1a G645C 7.07e-1 BA.1.1.1
V6481 4455G>T synonymous_variant ORF1ab_pp1a A1485A 8.66e-1 BA.1.1.1
V6521 4743G>T synonymous_variant ORF1ab_pp1a T1581T 6.55e-1 BA.1.1.1
V657 1981G>T missense_variant ORF1ab_pp1a G661C 1.00e+0 BA.1.1.1
V6634 5592G>T synonymous_variant ORF1ab_pp1a T1864T 1.00e+0 BA.1.1.1
V6686 6006G>T synonymous_variant ORF1ab_pp1a T2002T 1.00e+0 BA.1.1.1
V6695 6072G>T synonymous_variant ORF1ab_pp1a S2024S 8.66e-1 BA.1.1.1
V6704 6099G>T synonymous_variant ORF1ab_pp1a A2033A 1.00e+0 BA.1.1.1
V6765 6585G>T synonymous_variant ORF1ab_pp1a P2195P 1.00e+0 BA.1.1.1
V6908 7791G>T synonymous_variant ORF1ab_pp1a T2597T 1.00e+0 BA.1.1.1
V6950 8088G>T synonymous_variant ORF1ab_pp1a A2696A 1.00e+0 BA.1.1.1
V6952 8103G>T synonymous_variant ORF1ab_pp1a A2701A 1.00e+0 BA.1.1.1
V7125 9537G>T synonymous_variant ORF1ab_pp1a A3179A 7.75e-1 BA.1.1.1
V7140 9606G>T synonymous_variant ORF1ab_pp1a T3202T 1.00e+0 BA.1.1.1
V72 -58G>T upstream_gene_variant ORF1ab_pp1a None 7.75e-1 BA.1.1.1
V7246 10377G>T synonymous_variant ORF1ab_pp1a T3459T 6.55e-1 BA.1.1.1
V747 2359G>T missense_variant ORF1ab_pp1a G787W 1.00e+0 BA.1.1.1
V7502 12504G>T synonymous_variant ORF1ab_pp1a A4168A 7.07e-1 BA.1.1.1
V752 2374G>T stop_gained ORF1ab_pp1a E792* 1.00e+0 BA.1.1.1
V7567 12975G>T synonymous_variant ORF1ab_pp1a S4325S 7.75e-1 BA.1.1.1
V7602 13194G>T synonymous_variant ORF1ab_pp1a S4398S 6.55e-1 BA.1.1.1
V7604 13239G>T synonymous_variant ORF1ab_pp1ab P4413P 1.00e+0 BA.1.1.1
V762 2452G>T missense_variant ORF1ab_pp1a G818C 1.00e+0 BA.1.1.1
V7677 13854G>T synonymous_variant ORF1ab_pp1ab T4618T 1.00e+0 BA.1.1.1
V7699 14004G>T synonymous_variant ORF1ab_pp1ab T4668T 1.00e+0 BA.1.1.1
V7751 14358G>T synonymous_variant ORF1ab_pp1ab T4786T 1.00e+0 BA.1.1.1
V782 2593G>T missense_variant ORF1ab_pp1a G865C 1.00e+0 BA.1.1.1
V7846 15108G>T synonymous_variant ORF1ab_pp1ab T5036T 6.12e-1 BA.1.1.1
V787 2614G>T missense_variant ORF1ab_pp1a A872S 1.00e+0 BA.1.1.1
V7951 15957G>T synonymous_variant ORF1ab_pp1ab P5319P 1.00e+0 BA.1.1.1
V8011 16383G>T synonymous_variant ORF1ab_pp1ab T5461T 8.66e-1 BA.1.1.1
V81 -47G>T upstream_gene_variant ORF1ab_pp1a None 6.12e-1 BA.1.1.1
V8252 18198G>T synonymous_variant ORF1ab_pp1ab P6066P 1.00e+0 BA.1.1.1
V8296 18492G>T synonymous_variant ORF1ab_pp1ab P6164P 6.55e-1 BA.1.1.1
V8328 18696G>T synonymous_variant ORF1ab_pp1ab A6232A 6.12e-1 BA.1.1.1
V8388 19191G>T synonymous_variant ORF1ab_pp1ab T6397T 1.00e+0 BA.1.1.1
V8446 19698G>T synonymous_variant ORF1ab_pp1ab T6566T 7.75e-1 BA.1.1.1
V8502 20205G>T synonymous_variant ORF1ab_pp1ab A6735A 1.00e+0 BA.1.1.1
V8519 20406G>T synonymous_variant ORF1ab_pp1ab A6802A 8.66e-1 BA.1.1.1
V8521 20415G>T synonymous_variant ORF1ab_pp1ab P6805P 6.12e-1 BA.1.1.1
V8549 20673G>T synonymous_variant ORF1ab_pp1ab T6891T 1.00e+0 BA.1.1.1
V8678 336G>T synonymous_variant S S112S 1.00e+0 BA.1.1.1
V882 2977G>T missense_variant ORF1ab_pp1a G993C 7.75e-1 BA.1.1.1
V9003 2883G>T synonymous_variant S T961T 1.00e+0 BA.1.1.1
V9151 102G>T synonymous_variant ORF3a T34T 8.66e-1 BA.1.1.1
V9154 108G>T synonymous_variant ORF3a P36P 6.55e-1 BA.1.1.1
V9253 801G>T synonymous_variant ORF3a P267P 1.00e+0 BA.1.1.1
V9254 804G>T synonymous_variant ORF3a T268T 8.66e-1 BA.1.1.1
V9256 807G>T synonymous_variant ORF3a T269T 8.66e-1 BA.1.1.1
V9262 18G>T synonymous_variant E S6S 8.66e-1 BA.1.1.1
V9274 108G>T synonymous_variant E A36A 6.67e-1 BA.1.1.1
V9351 396G>T synonymous_variant M P132P 6.12e-1 BA.1.1.1
V9480 315G>T synonymous_variant ORF7a A105A 6.55e-1 BA.1.1.1
V9550 309G>T synonymous_variant ORF8 S103S 6.55e-1 BA.1.1.1
V9753 939G>T synonymous_variant N A313A 8.66e-1 BA.1.1.1
V9764 981G>T synonymous_variant N S327S 6.12e-1 BA.1.1.1
V9766 987G>T synonymous_variant N T329T 7.75e-1 BA.1.1.1
V978 3319G>T stop_gained ORF1ab_pp1a G1107* 1.00e+0 BA.1.1.1
V9824 30G>T synonymous_variant ORF10 P10P 8.66e-1 BA.1.1.1
V9825 36G>T synonymous_variant ORF10 T12T 6.12e-1 BA.1.1.1
V988 3355G>T missense_variant ORF1ab_pp1a G1119C 7.75e-1 BA.1.1.1
V2621 14444C>T missense_variant ORF1ab_pp1ab A4815V 1.00e+0 A.27
V5588 1042G>T missense_variant N D348Y 1.00e+0 A.27
V659 1987C>A missense_variant ORF1ab_pp1a Q663K 1.00e+0 A.27
V9623 330C>T synonymous_variant N F110F 1.00e+0 A.27
V1002 3424G>T stop_gained ORF1ab_pp1a E1142* 1.00e+0 AY.106
V1026 3509G>T missense_variant ORF1ab_pp1a R1170L 1.00e+0 AY.106
V103 -20G>T upstream_gene_variant ORF1ab_pp1a None 1.00e+0 AY.106
V1047 3610G>T missense_variant ORF1ab_pp1a A1204S 1.00e+0 AY.106
V1133 4127G>T missense_variant ORF1ab_pp1a R1376L 1.00e+0 AY.106
V1139 4157G>T missense_variant ORF1ab_pp1a R1386L 1.00e+0 AY.106
V1146 4211G>T missense_variant ORF1ab_pp1a R1404L 1.00e+0 AY.106
V1159 4318G>T missense_variant ORF1ab_pp1a D1440Y 1.00e+0 AY.106
V1164 4391G>T missense_variant ORF1ab_pp1a R1464L 1.00e+0 AY.106
V118 28G>T stop_gained ORF1ab_pp1a E10* 1.00e+0 AY.106
V120 40G>T missense_variant ORF1ab_pp1a V14F 1.00e+0 AY.106
V124 71G>T missense_variant ORF1ab_pp1a R24L 1.00e+0 AY.106
V125 73G>T missense_variant ORF1ab_pp1a D25Y 1.00e+0 AY.106
V1252 4883G>T missense_variant ORF1ab_pp1a R1628L 1.00e+0 AY.106
V126 76G>T missense_variant ORF1ab_pp1a V26L 1.00e+0 AY.106
V1298 5248G>T missense_variant ORF1ab_pp1a V1750L 1.00e+0 AY.106
V130 82G>T missense_variant ORF1ab_pp1a V28L 1.00e+0 AY.106
V132 86G>T missense_variant ORF1ab_pp1a R29L 1.00e+0 AY.106
V1345 5548G>T missense_variant ORF1ab_pp1a G1850C 1.00e+0 AY.106
V1374 5767G>T missense_variant ORF1ab_pp1a A1923S 1.00e+0 AY.106
V139 103G>T missense_variant ORF1ab_pp1a V35L 1.00e+0 AY.106
V1409 6032G>T missense_variant ORF1ab_pp1a R2011L 1.00e+0 AY.106
V1432 6097G>T missense_variant ORF1ab_pp1a A2033S 1.00e+0 AY.106
V1439 6124G>T stop_gained ORF1ab_pp1a E2042* 1.00e+0 AY.106
V1458 6181G>T missense_variant ORF1ab_pp1a V2061F 1.00e+0 AY.106
V146 128G>T missense_variant ORF1ab_pp1a R43L 1.00e+0 AY.106
V1464 6208G>T stop_gained ORF1ab_pp1a E2070* 1.00e+0 AY.106
V1544 6476G>T missense_variant ORF1ab_pp1a R2159L 1.00e+0 AY.106
V1546 6488G>T missense_variant ORF1ab_pp1a R2163L 1.00e+0 AY.106
V1565 6619G>T missense_variant ORF1ab_pp1a G2207C 1.00e+0 AY.106
V1578 6742G>T missense_variant ORF1ab_pp1a A2248S 1.00e+0 AY.106
V162 178G>T missense_variant ORF1ab_pp1a V60F 7.07e-1 AY.106
V1644 7207G>T missense_variant ORF1ab_pp1a G2403C 1.00e+0 AY.106
V1649 7244G>T missense_variant ORF1ab_pp1a R2415L 1.00e+0 AY.106
V1651 7264G>T stop_gained ORF1ab_pp1a E2422* 1.00e+0 AY.106
V1662 7471G>T missense_variant ORF1ab_pp1a V2491F 1.00e+0 AY.106
V168 218G>T missense_variant ORF1ab_pp1a R73L 1.00e+0 AY.106
V1712 7783G>T missense_variant ORF1ab_pp1a V2595F 1.00e+0 AY.106
V1716 7810G>T missense_variant ORF1ab_pp1a V2604L 1.00e+0 AY.106
V1743 7913G>T missense_variant ORF1ab_pp1a R2638L 1.00e+0 AY.106
V175 230G>T missense_variant ORF1ab_pp1a R77L 1.00e+0 AY.106
V1753 8002G>T missense_variant ORF1ab_pp1a D2668Y 1.00e+0 AY.106
V1760 8057G>T missense_variant ORF1ab_pp1a R2686L 1.00e+0 AY.106
V1766 8090G>T missense_variant ORF1ab_pp1a R2697L 1.00e+0 AY.106
V1774 8143G>T missense_variant ORF1ab_pp1a V2715F 1.00e+0 AY.106
V1777 8177G>T missense_variant ORF1ab_pp1a R2726L 1.00e+0 AY.106
V1778 8189G>T missense_variant ORF1ab_pp1a R2730L 1.00e+0 AY.106
V1819 8453G>T missense_variant ORF1ab_pp1a R2818L 1.00e+0 AY.106
V1829 8522G>T missense_variant ORF1ab_pp1a R2841L 1.00e+0 AY.106
V1846 8596G>T missense_variant ORF1ab_pp1a V2866L 1.00e+0 AY.106
V1857 8624G>T missense_variant ORF1ab_pp1a R2875L 1.00e+0 AY.106
V1883 8846G>T missense_variant ORF1ab_pp1a R2949L 1.00e+0 AY.106
V1886 8858G>T missense_variant ORF1ab_pp1a R2953L 1.00e+0 AY.106
V1900 8959G>T missense_variant ORF1ab_pp1a G2987C 1.00e+0 AY.106
V1961 9491G>T missense_variant ORF1ab_pp1a R3164L 1.00e+0 AY.106
V1964 9581G>T missense_variant ORF1ab_pp1a R3194L 1.00e+0 AY.106
V1979 9703G>T missense_variant ORF1ab_pp1a A3235S 1.00e+0 AY.106
V1993 9874G>T missense_variant ORF1ab_pp1a G3292C 1.00e+0 AY.106
V1997 9892G>T missense_variant ORF1ab_pp1a V3298L 1.00e+0 AY.106
V2005 9968G>T missense_variant ORF1ab_pp1a R3323L 1.00e+0 AY.106
V2030 10103G>T missense_variant ORF1ab_pp1a R3368L 1.00e+0 AY.106
V2055 10417G>T missense_variant ORF1ab_pp1a A3473S 1.00e+0 AY.106
V2060 10454G>T missense_variant ORF1ab_pp1a R3485L 1.00e+0 AY.106
V207 277G>T stop_gained ORF1ab_pp1a E93* 1.00e+0 AY.106
V2079 10570G>T missense_variant ORF1ab_pp1a V3524F 1.00e+0 AY.106
V2087 10625G>T missense_variant ORF1ab_pp1a R3542L 1.00e+0 AY.106
V212 292G>T missense_variant ORF1ab_pp1a G98C 1.00e+0 AY.106
V215 296G>T missense_variant ORF1ab_pp1a R99L 1.00e+0 AY.106
V2151 10985G>T missense_variant ORF1ab_pp1a R3662L 1.00e+0 AY.106
V2238 11405G>T missense_variant ORF1ab_pp1a R3802L 1.00e+0 AY.106
V228 337G>T stop_gained ORF1ab_pp1a E113* 1.00e+0 AY.106
V2310 11978G>T missense_variant ORF1ab_pp1a R3993L 1.00e+0 AY.106
V2313 11996G>T missense_variant ORF1ab_pp1a R3999L 1.00e+0 AY.106
V2358 12449G>T missense_variant ORF1ab_pp1a R4150L 1.00e+0 AY.106
V2362 12469G>T missense_variant ORF1ab_pp1a G4157C 1.00e+0 AY.106
V2386 12559G>T missense_variant ORF1ab_pp1a D4187Y 1.00e+0 AY.106
V239 356G>T missense_variant ORF1ab_pp1a R119L 7.07e-1 AY.106
V2406 12752G>T missense_variant ORF1ab_pp1a R4251L 1.00e+0 AY.106
V2424 12992G>T missense_variant ORF1ab_pp1a R4331L 1.00e+0 AY.106
V243 371G>T missense_variant ORF1ab_pp1a R124L 1.00e+0 AY.106
V2438 13114G>T missense_variant ORF1ab_pp1a V4372F 1.00e+0 AY.106
V2439 13120G>T missense_variant ORF1ab_pp1a G4374C 1.00e+0 AY.106
V2445 13160G>T missense_variant ORF1ab_pp1a R4387L 1.00e+0 AY.106
V2446 13162G>T stop_gained ORF1ab_pp1a E4388* 1.00e+0 AY.106
V245 379G>T missense_variant ORF1ab_pp1a G127C 1.00e+0 AY.106
V2452 13204G>T missense_variant ORF1ab_pp1a G4402W 1.00e+0 AY.106
V2453 13213G>T missense_variant ORF1ab_pp1ab G4405C 1.00e+0 AY.106
V2456 13229G>T missense_variant ORF1ab_pp1ab R4410L 1.00e+0 AY.106
V2459 13243G>T missense_variant ORF1ab_pp1ab G4415C 1.00e+0 AY.106
V2463 13267G>T missense_variant ORF1ab_pp1ab V4423L 1.00e+0 AY.106
V2470 13340G>T missense_variant ORF1ab_pp1ab R4447L 1.00e+0 AY.106
V2474 13357G>T stop_gained ORF1ab_pp1ab E4453* 1.00e+0 AY.106
V2496 13498G>T missense_variant ORF1ab_pp1ab G4500C 1.00e+0 AY.106
V2500 13523G>T missense_variant ORF1ab_pp1ab R4508L 1.00e+0 AY.106
V2503 13529G>T missense_variant ORF1ab_pp1ab R4510L 1.00e+0 AY.106
V2507 13558G>T missense_variant ORF1ab_pp1ab V4520F 1.00e+0 AY.106
V251 409G>T missense_variant ORF1ab_pp1a G137C 1.00e+0 AY.106
V2528 13694G>T missense_variant ORF1ab_pp1ab R4565L 1.00e+0 AY.106
V2529 13696G>T missense_variant ORF1ab_pp1ab V4566L 1.00e+0 AY.106
V2532 13702G>T missense_variant ORF1ab_pp1ab A4568S 1.00e+0 AY.106
V2534 13718G>T missense_variant ORF1ab_pp1ab R4573L 1.00e+0 AY.106
V2535 13724G>T missense_variant ORF1ab_pp1ab R4575L 1.00e+0 AY.106
V2540 13766G>T missense_variant ORF1ab_pp1ab R4589L 1.00e+0 AY.106
V2543 13834G>T missense_variant ORF1ab_pp1ab G4612C 1.00e+0 AY.106
V255 412G>T missense_variant ORF1ab_pp1a A138S 1.00e+0 AY.106
V257 415G>T missense_variant ORF1ab_pp1a D139Y 1.00e+0 AY.106
V2584 14030G>T missense_variant ORF1ab_pp1ab R4677L 1.00e+0 AY.106
V2612 14320G>T missense_variant ORF1ab_pp1ab A4774S 1.00e+0 AY.106
V2615 14351G>T missense_variant ORF1ab_pp1ab R4784L 1.00e+0 AY.106
V2620 14413G>T missense_variant ORF1ab_pp1ab G4805C 1.00e+0 AY.106
V2631 14530G>T missense_variant ORF1ab_pp1ab D4844Y 1.00e+0 AY.106
V2632 14546G>T missense_variant ORF1ab_pp1ab R4849L 1.00e+0 AY.106
V2641 14659G>T missense_variant ORF1ab_pp1ab V4887F 1.00e+0 AY.106
V2652 14761G>T missense_variant ORF1ab_pp1ab A4921S 7.07e-1 AY.106
V2654 14774G>T missense_variant ORF1ab_pp1ab R4925L 1.00e+0 AY.106
V2656 14840G>T missense_variant ORF1ab_pp1ab R4947L 1.00e+0 AY.106
V2657 14845G>T missense_variant ORF1ab_pp1ab V4949L 1.00e+0 AY.106
V2660 14917G>T missense_variant ORF1ab_pp1ab A4973S 1.00e+0 AY.106
V2680 15095G>T missense_variant ORF1ab_pp1ab R5032L 1.00e+0 AY.106
V2687 15128G>T missense_variant ORF1ab_pp1ab R5043L 1.00e+0 AY.106
V269 439G>T missense_variant ORF1ab_pp1a D147Y 1.00e+0 AY.106
V270 442G>T stop_gained ORF1ab_pp1a E148* 1.00e+0 AY.106
V2702 15325G>T missense_variant ORF1ab_pp1ab D5109Y 1.00e+0 AY.106
V2706 15338G>T missense_variant ORF1ab_pp1ab R5113L 1.00e+0 AY.106
V2715 15415G>T missense_variant ORF1ab_pp1ab A5139S 1.00e+0 AY.106
V2716 15425G>T missense_variant ORF1ab_pp1ab R5142L 1.00e+0 AY.106
V2719 15457G>T missense_variant ORF1ab_pp1ab D5153Y 1.00e+0 AY.106
V2743 15697G>T missense_variant ORF1ab_pp1ab G5233C 1.00e+0 AY.106
V2746 15749G>T missense_variant ORF1ab_pp1ab R5250L 1.00e+0 AY.106
V2747 15754G>T missense_variant ORF1ab_pp1ab V5252L 1.00e+0 AY.106
V2772 16034G>T missense_variant ORF1ab_pp1ab R5345L 1.00e+0 AY.106
V2796 16273G>T missense_variant ORF1ab_pp1ab D5425Y 1.00e+0 AY.106
V2812 16436G>T missense_variant ORF1ab_pp1ab R5479L 7.07e-1 AY.106
V2822 16505G>T missense_variant ORF1ab_pp1ab R5502L 1.00e+0 AY.106
V2823 16529G>T missense_variant ORF1ab_pp1ab R5510L 1.00e+0 AY.106
V2834 16607G>T missense_variant ORF1ab_pp1ab R5536L 1.00e+0 AY.106
V285 512G>T missense_variant ORF1ab_pp1a R171L 1.00e+0 AY.106
V287 524G>T missense_variant ORF1ab_pp1a R175L 1.00e+0 AY.106
V2880 16880G>T missense_variant ORF1ab_pp1ab R5627L 1.00e+0 AY.106
V2884 16909G>T missense_variant ORF1ab_pp1ab A5637S 1.00e+0 AY.106
V289 535G>T stop_gained ORF1ab_pp1a G179* 1.00e+0 AY.106
V2894 16982G>T missense_variant ORF1ab_pp1ab R5661L 1.00e+0 AY.106
V2896 16988G>T missense_variant ORF1ab_pp1ab R5663L 1.00e+0 AY.106
V29 -142G>T upstream_gene_variant ORF1ab_pp1a None 1.00e+0 AY.106
V2919 17173G>T missense_variant ORF1ab_pp1ab D5725Y 1.00e+0 AY.106
V2923 17198G>T missense_variant ORF1ab_pp1ab R5733L 1.00e+0 AY.106
V2933 17287G>T stop_gained ORF1ab_pp1ab G5763* 1.00e+0 AY.106
V2935 17297G>T missense_variant ORF1ab_pp1ab R5766L 1.00e+0 AY.106
V2936 17300G>T missense_variant ORF1ab_pp1ab R5767L 1.00e+0 AY.106
V2956 17455G>T missense_variant ORF1ab_pp1ab V5819L 1.00e+0 AY.106
V296 551G>T missense_variant ORF1ab_pp1a R184L 1.00e+0 AY.106
V2960 17477G>T missense_variant ORF1ab_pp1ab R5826L 1.00e+0 AY.106
V297 559G>T missense_variant ORF1ab_pp1a D187Y 1.00e+0 AY.106
V2992 17753G>T missense_variant ORF1ab_pp1ab R5918L 1.00e+0 AY.106
V3039 18002G>T missense_variant ORF1ab_pp1ab R6001L 1.00e+0 AY.106
V3040 18004G>T stop_gained ORF1ab_pp1ab E6002* 1.00e+0 AY.106
V3045 18026G>T missense_variant ORF1ab_pp1ab R6009L 1.00e+0 AY.106
V3048 18043G>T missense_variant ORF1ab_pp1ab D6015Y 1.00e+0 AY.106
V3049 18049G>T stop_gained ORF1ab_pp1ab E6017* 1.00e+0 AY.106
V3085 18263G>T missense_variant ORF1ab_pp1ab R6088L 1.00e+0 AY.106
V3092 18319G>T missense_variant ORF1ab_pp1ab V6107L 7.07e-1 AY.106
V3102 18389G>T missense_variant ORF1ab_pp1ab R6130L 1.00e+0 AY.106
V3105 18413G>T missense_variant ORF1ab_pp1ab R6138L 1.00e+0 AY.106
V311 620G>T missense_variant ORF1ab_pp1a R207L 1.00e+0 AY.106
V3115 18481G>T missense_variant ORF1ab_pp1ab V6161F 1.00e+0 AY.106
V3130 18625G>T stop_gained ORF1ab_pp1ab E6209* 1.00e+0 AY.106
V3135 18641G>T missense_variant ORF1ab_pp1ab R6214L 1.00e+0 AY.106
V321 649G>T stop_gained ORF1ab_pp1a E217* 1.00e+0 AY.106
V3254 19538G>T missense_variant ORF1ab_pp1ab R6513L 1.00e+0 AY.106
V3293 19769G>T missense_variant ORF1ab_pp1ab R6590L 1.00e+0 AY.106
V332 695G>T missense_variant ORF1ab_pp1a R232L 1.00e+0 AY.106
V3331 20027G>T missense_variant ORF1ab_pp1ab R6676L 1.00e+0 AY.106
V3334 20053G>T stop_gained ORF1ab_pp1ab E6685* 1.00e+0 AY.106
V3338 20062G>T missense_variant ORF1ab_pp1ab V6688F 1.00e+0 AY.106
V3345 20126G>T missense_variant ORF1ab_pp1ab R6709L 1.00e+0 AY.106
V336 731G>T missense_variant ORF1ab_pp1a R244L 1.00e+0 AY.106
V3415 20527G>T missense_variant ORF1ab_pp1ab A6843S 1.00e+0 AY.106
V3428 20683G>T missense_variant ORF1ab_pp1ab D6895Y 1.00e+0 AY.106
V3444 20791G>T missense_variant ORF1ab_pp1ab D6931Y 1.00e+0 AY.106
V3462 20893G>T missense_variant ORF1ab_pp1ab V6965L 1.00e+0 AY.106
V3487 21041G>T missense_variant ORF1ab_pp1ab R7014L 1.00e+0 AY.106
V3488 21043G>T stop_gained ORF1ab_pp1ab E7015* 1.00e+0 AY.106
V3517 -5G>T upstream_gene_variant S None 1.00e+0 AY.106
V3562 101G>T missense_variant S R34L 1.00e+0 AY.106
V3621 367G>T missense_variant S A123S 1.00e+0 AY.106
V370 902G>T missense_variant ORF1ab_pp1a R301L 1.00e+0 AY.106
V38 -114G>T upstream_gene_variant ORF1ab_pp1a None 1.00e+0 AY.106
V3822 1030G>T missense_variant S A344S 1.00e+0 AY.106
V3857 1231G>T missense_variant S A411S 1.00e+0 AY.106
V3959 1730G>T missense_variant S R577L 1.00e+0 AY.106
V396 1003G>T missense_variant ORF1ab_pp1a D335Y 1.00e+0 AY.106
V3985 1901G>T missense_variant S R634L 1.00e+0 AY.106
V3991 1937G>T missense_variant S R646L 1.00e+0 AY.106
V4005 2014G>T missense_variant S A672S 1.00e+0 AY.106
V401 1024G>T stop_gained ORF1ab_pp1a E342* 1.00e+0 AY.106
V4024 2042C>T missense_variant S P681L 1.00e+0 AY.106
V4025 2045G>T missense_variant S R682L 1.00e+0 AY.106
V4026 2048G>T missense_variant S R683L 1.00e+0 AY.106
V4029 2054G>T missense_variant S R685L 1.00e+0 AY.106
V4065 2294G>T missense_variant S R765L 7.07e-1 AY.106
V41 -101G>T upstream_gene_variant ORF1ab_pp1a None 1.00e+0 AY.106
V4109 2569G>T missense_variant S G857C 1.00e+0 AY.106
V4150 2948G>T missense_variant S R983L 1.00e+0 AY.106
V4185 3272G>T missense_variant S R1091L 1.00e+0 AY.106
V4235 3554G>T missense_variant S R1185L 1.00e+0 AY.106
V4244 3595G>T missense_variant S D1199Y 1.00e+0 AY.106
V4302 -6G>T upstream_gene_variant ORF3a None 1.00e+0 AY.106
V4347 91G>T missense_variant ORF3a A31S 7.07e-1 AY.106
V437 1156G>T stop_gained ORF1ab_pp1a E386* 1.00e+0 AY.106
V4379 130G>T stop_gained ORF3a G44* 1.00e+0 AY.106
V4391 148G>T missense_variant ORF3a V50F 1.00e+0 AY.106
V4410 175G>T missense_variant ORF3a A59S 7.07e-1 AY.106
V4459 289G>T missense_variant ORF3a V97F 1.00e+0 AY.106
V446 1193G>T missense_variant ORF1ab_pp1a R398L 1.00e+0 AY.106
V4512 401G>T missense_variant ORF3a R134L 1.00e+0 AY.106
V453 1205G>T missense_variant ORF1ab_pp1a R402L 1.00e+0 AY.106
V4614 751G>T missense_variant ORF3a G251C 1.00e+0 AY.106
V4620 760G>T stop_gained ORF3a G254* 1.00e+0 AY.106
V464 1277G>T missense_variant ORF1ab_pp1a R426L 1.00e+0 AY.106
V4652 817G>T missense_variant ORF3a V273L 7.07e-1 AY.106
V4672 70G>T missense_variant E V24L 1.00e+0 AY.106
V4678 145G>T missense_variant E V49L 1.00e+0 AY.106
V469 1285G>T missense_variant ORF1ab_pp1a A429S 1.00e+0 AY.106
V4722 16G>T missense_variant M G6C 1.00e+0 AY.106
V4757 232G>T missense_variant M G78C 1.00e+0 AY.106
V4763 247G>T missense_variant M A83S 1.00e+0 AY.106
V4772 320G>T missense_variant M R107L 1.00e+0 AY.106
V4782 473G>T missense_variant M R158L 1.00e+0 AY.106
V4784 521G>T missense_variant M R174L 1.00e+0 AY.106
V4788 593G>T missense_variant M R198L 1.00e+0 AY.106
V4800 13G>T missense_variant ORF6 V5F 1.00e+0 AY.106
V484 1330G>T stop_gained ORF1ab_pp1a E444* 1.00e+0 AY.106
V4864 37G>T missense_variant ORF7a A13S 1.00e+0 AY.106
V4895 121G>T stop_gained ORF7a E41* 1.00e+0 AY.106
V4930 208G>T missense_variant ORF7a G70C 1.00e+0 AY.106
V4932 211G>T missense_variant ORF7a V71L 7.07e-1 AY.106
V4937 220G>T missense_variant ORF7a V74F 7.07e-1 AY.106
V4943 233G>T missense_variant ORF7a R78L 1.00e+0 AY.106
V5056 127G>T missense_variant ORF7b A43S 1.00e+0 AY.106
V5061 -4G>T upstream_gene_variant ORF8 None 1.00e+0 AY.106
V511 1420G>T missense_variant ORF1ab_pp1a A474S 1.00e+0 AY.106
V5173 223G>T missense_variant ORF8 D75Y 1.00e+0 AY.106
V5176 229G>T missense_variant ORF8 G77C 1.00e+0 AY.106
V5196 302G>T missense_variant ORF8 R101L 7.07e-1 AY.106
V5209 340G>T missense_variant ORF8 V114F 1.00e+0 AY.106
V5212 344G>T missense_variant ORF8 R115L 1.00e+0 AY.106
V5234 -12G>T upstream_gene_variant N None 1.00e+0 AY.106
V5266 29G>T missense_variant N R10L 1.00e+0 AY.106
V5277 41G>T missense_variant N R14L 1.00e+0 AY.106
V5324 107G>T missense_variant N R36L 1.00e+0 AY.106
V5331 119G>T missense_variant N R40L 1.00e+0 AY.106
V5345 203G>T missense_variant N R68L 1.00e+0 AY.106
V5349 214G>T missense_variant N V72F 1.00e+0 AY.106
V5355 263G>T missense_variant N R88L 1.00e+0 AY.106
V5359 278G>T missense_variant N R93L 1.00e+0 AY.106
V5361 284G>T missense_variant N R95L 1.00e+0 AY.106
V5364 295G>T missense_variant N G99C 1.00e+0 AY.106
V5379 385G>T missense_variant N G129C 1.00e+0 AY.106
V5395 446G>T missense_variant N R149L 1.00e+0 AY.106
V5404 472G>T missense_variant N V158L 1.00e+0 AY.106
V5414 517G>T missense_variant N A173S 1.00e+0 AY.106
V5419 535G>T missense_variant N G179C 7.07e-1 AY.106
V5429 554G>T missense_variant N R185L 1.00e+0 AY.106
V5434 566G>T missense_variant N R189L 1.00e+0 AY.106
V5437 572G>T missense_variant N R191L 1.00e+0 AY.106
V5536 776G>T missense_variant N R259L 1.00e+0 AY.106
V5537 785G>T missense_variant N R262L 1.00e+0 AY.106
V554 1625G>T missense_variant ORF1ab_pp1a R542L 1.00e+0 AY.106
V5546 823G>T missense_variant N G275C 1.00e+0 AY.106
V5547 830G>T missense_variant N R277L 1.00e+0 AY.106
V556 1634G>T missense_variant ORF1ab_pp1a R545L 1.00e+0 AY.106
V5566 946G>T stop_gained N G316* 1.00e+0 AY.106
V5570 956G>T missense_variant N R319L 1.00e+0 AY.106
V563 1649G>T missense_variant ORF1ab_pp1a R550L 1.00e+0 AY.106
V5688 16G>T missense_variant ORF10 V6F 1.00e+0 AY.106
V5708 71G>T missense_variant ORF10 R24L 7.07e-1 AY.106
V574 1679G>T missense_variant ORF1ab_pp1a R560L 1.00e+0 AY.106
V5794 *4371G>T downstream_gene_variant S None 7.07e-1 AY.106
V581 1696G>T missense_variant ORF1ab_pp1a A566S 1.00e+0 AY.106
V5875 222G>T synonymous_variant ORF1ab_pp1a S74S 1.00e+0 AY.106
V5970 726G>T synonymous_variant ORF1ab_pp1a T242T 1.00e+0 AY.106
V5998 921G>T synonymous_variant ORF1ab_pp1a A307A 1.00e+0 AY.106
V61 -68G>T upstream_gene_variant ORF1ab_pp1a None 1.00e+0 AY.106
V6121 1830G>T synonymous_variant ORF1ab_pp1a S610S 1.00e+0 AY.106
V6165 2133G>T synonymous_variant ORF1ab_pp1a T711T 1.00e+0 AY.106
V631 1879G>T missense_variant ORF1ab_pp1a V627F 7.07e-1 AY.106
V6420 3990G>T synonymous_variant ORF1ab_pp1a P1330P 1.00e+0 AY.106
V643 1933G>T missense_variant ORF1ab_pp1a G645C 1.00e+0 AY.106
V6481 4455G>T synonymous_variant ORF1ab_pp1a A1485A 1.00e+0 AY.106
V6521 4743G>T synonymous_variant ORF1ab_pp1a T1581T 1.00e+0 AY.106
V657 1981G>T missense_variant ORF1ab_pp1a G661C 1.00e+0 AY.106
V6634 5592G>T synonymous_variant ORF1ab_pp1a T1864T 1.00e+0 AY.106
V6686 6006G>T synonymous_variant ORF1ab_pp1a T2002T 1.00e+0 AY.106
V6695 6072G>T synonymous_variant ORF1ab_pp1a S2024S 7.07e-1 AY.106
V6704 6099G>T synonymous_variant ORF1ab_pp1a A2033A 1.00e+0 AY.106
V6900 7752G>T synonymous_variant ORF1ab_pp1a A2584A 1.00e+0 AY.106
V6908 7791G>T synonymous_variant ORF1ab_pp1a T2597T 1.00e+0 AY.106
V6950 8088G>T synonymous_variant ORF1ab_pp1a A2696A 1.00e+0 AY.106
V6952 8103G>T synonymous_variant ORF1ab_pp1a A2701A 1.00e+0 AY.106
V7125 9537G>T synonymous_variant ORF1ab_pp1a A3179A 7.07e-1 AY.106
V7140 9606G>T synonymous_variant ORF1ab_pp1a T3202T 1.00e+0 AY.106
V72 -58G>T upstream_gene_variant ORF1ab_pp1a None 1.00e+0 AY.106
V7246 10377G>T synonymous_variant ORF1ab_pp1a T3459T 1.00e+0 AY.106
V747 2359G>T missense_variant ORF1ab_pp1a G787W 1.00e+0 AY.106
V7502 12504G>T synonymous_variant ORF1ab_pp1a A4168A 7.07e-1 AY.106
V752 2374G>T stop_gained ORF1ab_pp1a E792* 1.00e+0 AY.106
V7559 12936G>T synonymous_variant ORF1ab_pp1a P4312P 7.07e-1 AY.106
V7567 12975G>T synonymous_variant ORF1ab_pp1a S4325S 1.00e+0 AY.106
V7602 13194G>T synonymous_variant ORF1ab_pp1a S4398S 7.07e-1 AY.106
V7604 13239G>T synonymous_variant ORF1ab_pp1ab P4413P 1.00e+0 AY.106
V762 2452G>T missense_variant ORF1ab_pp1a G818C 1.00e+0 AY.106
V7677 13854G>T synonymous_variant ORF1ab_pp1ab T4618T 1.00e+0 AY.106
V7699 14004G>T synonymous_variant ORF1ab_pp1ab T4668T 1.00e+0 AY.106
V7751 14358G>T synonymous_variant ORF1ab_pp1ab T4786T 1.00e+0 AY.106
V782 2593G>T missense_variant ORF1ab_pp1a G865C 1.00e+0 AY.106
V787 2614G>T missense_variant ORF1ab_pp1a A872S 1.00e+0 AY.106
V7951 15957G>T synonymous_variant ORF1ab_pp1ab P5319P 1.00e+0 AY.106
V7974 16113G>T synonymous_variant ORF1ab_pp1ab P5371P 7.07e-1 AY.106
V8011 16383G>T synonymous_variant ORF1ab_pp1ab T5461T 1.00e+0 AY.106
V8101 17070G>T synonymous_variant ORF1ab_pp1ab T5690T 1.00e+0 AY.106
V8252 18198G>T synonymous_variant ORF1ab_pp1ab P6066P 1.00e+0 AY.106
V8296 18492G>T synonymous_variant ORF1ab_pp1ab P6164P 7.07e-1 AY.106
V8328 18696G>T synonymous_variant ORF1ab_pp1ab A6232A 7.07e-1 AY.106
V8502 20205G>T synonymous_variant ORF1ab_pp1ab A6735A 1.00e+0 AY.106
V8519 20406G>T synonymous_variant ORF1ab_pp1ab A6802A 1.00e+0 AY.106
V8549 20673G>T synonymous_variant ORF1ab_pp1ab T6891T 1.00e+0 AY.106
V8663 250C>T synonymous_variant S L84L 1.00e+0 AY.106
V8698 489G>T synonymous_variant S A163A 1.00e+0 AY.106
V8711 624G>T synonymous_variant S T208T 1.00e+0 AY.106
V882 2977G>T missense_variant ORF1ab_pp1a G993C 1.00e+0 AY.106
V9154 108G>T synonymous_variant ORF3a P36P 1.00e+0 AY.106
V9253 801G>T synonymous_variant ORF3a P267P 1.00e+0 AY.106
V9254 804G>T synonymous_variant ORF3a T268T 1.00e+0 AY.106
V9256 807G>T synonymous_variant ORF3a T269T 1.00e+0 AY.106
V9274 108G>T synonymous_variant E A36A 1.00e+0 AY.106
V9325 300C>T synonymous_variant M F100F 1.00e+0 AY.106
V9332 318G>T synonymous_variant M T106T 1.00e+0 AY.106
V9381 552G>T synonymous_variant M S184S 1.00e+0 AY.106
V9550 309G>T synonymous_variant ORF8 S103S 1.00e+0 AY.106
V9568 48G>T synonymous_variant N T16T 7.07e-1 AY.106
V9596 150G>T synonymous_variant N A50A 1.00e+0 AY.106
V9753 939G>T synonymous_variant N A313A 1.00e+0 AY.106
V978 3319G>T stop_gained ORF1ab_pp1a G1107* 1.00e+0 AY.106
V9824 30G>T synonymous_variant ORF10 P10P 1.00e+0 AY.106
V9825 36G>T synonymous_variant ORF10 T12T 1.00e+0 AY.106
V988 3355G>T missense_variant ORF1ab_pp1a G1119C 1.00e+0 AY.106
V1002 3424G>T stop_gained ORF1ab_pp1a E1142* 1.00e+0 AY.111
V1026 3509G>T missense_variant ORF1ab_pp1a R1170L 1.00e+0 AY.111
V103 -20G>T upstream_gene_variant ORF1ab_pp1a None 1.00e+0 AY.111
V1047 3610G>T missense_variant ORF1ab_pp1a A1204S 1.00e+0 AY.111
V11 -194G>T upstream_gene_variant ORF1ab_pp1a None 1.00e+0 AY.111
V111 -10G>T upstream_gene_variant ORF1ab_pp1a None 6.32e-1 AY.111
V1133 4127G>T missense_variant ORF1ab_pp1a R1376L 1.00e+0 AY.111
V1139 4157G>T missense_variant ORF1ab_pp1a R1386L 1.00e+0 AY.111
V1146 4211G>T missense_variant ORF1ab_pp1a R1404L 1.00e+0 AY.111
V1159 4318G>T missense_variant ORF1ab_pp1a D1440Y 1.00e+0 AY.111
V1164 4391G>T missense_variant ORF1ab_pp1a R1464L 1.00e+0 AY.111
V118 28G>T stop_gained ORF1ab_pp1a E10* 1.00e+0 AY.111
V120 40G>T missense_variant ORF1ab_pp1a V14F 8.16e-1 AY.111
V124 71G>T missense_variant ORF1ab_pp1a R24L 1.00e+0 AY.111
V125 73G>T missense_variant ORF1ab_pp1a D25Y 1.00e+0 AY.111
V1252 4883G>T missense_variant ORF1ab_pp1a R1628L 1.00e+0 AY.111
V1254 4885G>T missense_variant ORF1ab_pp1a V1629F 7.07e-1 AY.111
V126 76G>T missense_variant ORF1ab_pp1a V26L 1.00e+0 AY.111
V1298 5248G>T missense_variant ORF1ab_pp1a V1750L 1.00e+0 AY.111
V130 82G>T missense_variant ORF1ab_pp1a V28L 1.00e+0 AY.111
V132 86G>T missense_variant ORF1ab_pp1a R29L 1.00e+0 AY.111
V1345 5548G>T missense_variant ORF1ab_pp1a G1850C 1.00e+0 AY.111
V1374 5767G>T missense_variant ORF1ab_pp1a A1923S 6.32e-1 AY.111
V139 103G>T missense_variant ORF1ab_pp1a V35L 1.00e+0 AY.111
V1409 6032G>T missense_variant ORF1ab_pp1a R2011L 1.00e+0 AY.111
V1432 6097G>T missense_variant ORF1ab_pp1a A2033S 1.00e+0 AY.111
V1439 6124G>T stop_gained ORF1ab_pp1a E2042* 1.00e+0 AY.111
V1458 6181G>T missense_variant ORF1ab_pp1a V2061F 7.07e-1 AY.111
V146 128G>T missense_variant ORF1ab_pp1a R43L 1.00e+0 AY.111
V1464 6208G>T stop_gained ORF1ab_pp1a E2070* 1.00e+0 AY.111
V1544 6476G>T missense_variant ORF1ab_pp1a R2159L 1.00e+0 AY.111
V1546 6488G>T missense_variant ORF1ab_pp1a R2163L 1.00e+0 AY.111
V1565 6619G>T missense_variant ORF1ab_pp1a G2207C 8.16e-1 AY.111
V1578 6742G>T missense_variant ORF1ab_pp1a A2248S 1.00e+0 AY.111
V162 178G>T missense_variant ORF1ab_pp1a V60F 7.07e-1 AY.111
V1644 7207G>T missense_variant ORF1ab_pp1a G2403C 1.00e+0 AY.111
V1649 7244G>T missense_variant ORF1ab_pp1a R2415L 1.00e+0 AY.111
V1651 7264G>T stop_gained ORF1ab_pp1a E2422* 1.00e+0 AY.111
V1662 7471G>T missense_variant ORF1ab_pp1a V2491F 1.00e+0 AY.111
V168 218G>T missense_variant ORF1ab_pp1a R73L 1.00e+0 AY.111
V1712 7783G>T missense_variant ORF1ab_pp1a V2595F 1.00e+0 AY.111
V1716 7810G>T missense_variant ORF1ab_pp1a V2604L 1.00e+0 AY.111
V1743 7913G>T missense_variant ORF1ab_pp1a R2638L 1.00e+0 AY.111
V175 230G>T missense_variant ORF1ab_pp1a R77L 1.00e+0 AY.111
V1753 8002G>T missense_variant ORF1ab_pp1a D2668Y 1.00e+0 AY.111
V1760 8057G>T missense_variant ORF1ab_pp1a R2686L 1.00e+0 AY.111
V1766 8090G>T missense_variant ORF1ab_pp1a R2697L 1.00e+0 AY.111
V1777 8177G>T missense_variant ORF1ab_pp1a R2726L 1.00e+0 AY.111
V1778 8189G>T missense_variant ORF1ab_pp1a R2730L 1.00e+0 AY.111
V1819 8453G>T missense_variant ORF1ab_pp1a R2818L 1.00e+0 AY.111
V1829 8522G>T missense_variant ORF1ab_pp1a R2841L 8.16e-1 AY.111
V1846 8596G>T missense_variant ORF1ab_pp1a V2866L 1.00e+0 AY.111
V1857 8624G>T missense_variant ORF1ab_pp1a R2875L 1.00e+0 AY.111
V1883 8846G>T missense_variant ORF1ab_pp1a R2949L 1.00e+0 AY.111
V1886 8858G>T missense_variant ORF1ab_pp1a R2953L 1.00e+0 AY.111
V1900 8959G>T missense_variant ORF1ab_pp1a G2987C 1.00e+0 AY.111
V1961 9491G>T missense_variant ORF1ab_pp1a R3164L 1.00e+0 AY.111
V1964 9581G>T missense_variant ORF1ab_pp1a R3194L 1.00e+0 AY.111
V1979 9703G>T missense_variant ORF1ab_pp1a A3235S 8.16e-1 AY.111
V1993 9874G>T missense_variant ORF1ab_pp1a G3292C 1.00e+0 AY.111
V1997 9892G>T missense_variant ORF1ab_pp1a V3298L 1.00e+0 AY.111
V2005 9968G>T missense_variant ORF1ab_pp1a R3323L 1.00e+0 AY.111
V2030 10103G>T missense_variant ORF1ab_pp1a R3368L 1.00e+0 AY.111
V2055 10417G>T missense_variant ORF1ab_pp1a A3473S 1.00e+0 AY.111
V2060 10454G>T missense_variant ORF1ab_pp1a R3485L 1.00e+0 AY.111
V207 277G>T stop_gained ORF1ab_pp1a E93* 1.00e+0 AY.111
V2079 10570G>T missense_variant ORF1ab_pp1a V3524F 1.00e+0 AY.111
V2087 10625G>T missense_variant ORF1ab_pp1a R3542L 1.00e+0 AY.111
V21 -165G>T upstream_gene_variant ORF1ab_pp1a None 1.00e+0 AY.111
V212 292G>T missense_variant ORF1ab_pp1a G98C 1.00e+0 AY.111
V215 296G>T missense_variant ORF1ab_pp1a R99L 1.00e+0 AY.111
V2151 10985G>T missense_variant ORF1ab_pp1a R3662L 1.00e+0 AY.111
V2238 11405G>T missense_variant ORF1ab_pp1a R3802L 1.00e+0 AY.111
V228 337G>T stop_gained ORF1ab_pp1a E113* 1.00e+0 AY.111
V2310 11978G>T missense_variant ORF1ab_pp1a R3993L 1.00e+0 AY.111
V2313 11996G>T missense_variant ORF1ab_pp1a R3999L 1.00e+0 AY.111
V2358 12449G>T missense_variant ORF1ab_pp1a R4150L 1.00e+0 AY.111
V2362 12469G>T missense_variant ORF1ab_pp1a G4157C 1.00e+0 AY.111
V2386 12559G>T missense_variant ORF1ab_pp1a D4187Y 1.00e+0 AY.111
V239 356G>T missense_variant ORF1ab_pp1a R119L 1.00e+0 AY.111
V2406 12752G>T missense_variant ORF1ab_pp1a R4251L 1.00e+0 AY.111
V2424 12992G>T missense_variant ORF1ab_pp1a R4331L 1.00e+0 AY.111
V243 371G>T missense_variant ORF1ab_pp1a R124L 1.00e+0 AY.111
V2438 13114G>T missense_variant ORF1ab_pp1a V4372F 1.00e+0 AY.111
V2439 13120G>T missense_variant ORF1ab_pp1a G4374C 1.00e+0 AY.111
V2445 13160G>T missense_variant ORF1ab_pp1a R4387L 1.00e+0 AY.111
V2446 13162G>T stop_gained ORF1ab_pp1a E4388* 1.00e+0 AY.111
V245 379G>T missense_variant ORF1ab_pp1a G127C 1.00e+0 AY.111
V2452 13204G>T missense_variant ORF1ab_pp1a G4402W 1.00e+0 AY.111
V2453 13213G>T missense_variant ORF1ab_pp1ab G4405C 1.00e+0 AY.111
V2456 13229G>T missense_variant ORF1ab_pp1ab R4410L 1.00e+0 AY.111
V2459 13243G>T missense_variant ORF1ab_pp1ab G4415C 1.00e+0 AY.111
V2463 13267G>T missense_variant ORF1ab_pp1ab V4423L 1.00e+0 AY.111
V2470 13340G>T missense_variant ORF1ab_pp1ab R4447L 1.00e+0 AY.111
V2474 13357G>T stop_gained ORF1ab_pp1ab E4453* 1.00e+0 AY.111
V2496 13498G>T missense_variant ORF1ab_pp1ab G4500C 1.00e+0 AY.111
V2500 13523G>T missense_variant ORF1ab_pp1ab R4508L 1.00e+0 AY.111
V2503 13529G>T missense_variant ORF1ab_pp1ab R4510L 1.00e+0 AY.111
V2507 13558G>T missense_variant ORF1ab_pp1ab V4520F 1.00e+0 AY.111
V251 409G>T missense_variant ORF1ab_pp1a G137C 1.00e+0 AY.111
V2528 13694G>T missense_variant ORF1ab_pp1ab R4565L 1.00e+0 AY.111
V2529 13696G>T missense_variant ORF1ab_pp1ab V4566L 1.00e+0 AY.111
V2532 13702G>T missense_variant ORF1ab_pp1ab A4568S 8.16e-1 AY.111
V2534 13718G>T missense_variant ORF1ab_pp1ab R4573L 1.00e+0 AY.111
V2535 13724G>T missense_variant ORF1ab_pp1ab R4575L 1.00e+0 AY.111
V2540 13766G>T missense_variant ORF1ab_pp1ab R4589L 1.00e+0 AY.111
V2543 13834G>T missense_variant ORF1ab_pp1ab G4612C 1.00e+0 AY.111
V255 412G>T missense_variant ORF1ab_pp1a A138S 1.00e+0 AY.111
V257 415G>T missense_variant ORF1ab_pp1a D139Y 1.00e+0 AY.111
V2584 14030G>T missense_variant ORF1ab_pp1ab R4677L 1.00e+0 AY.111
V2612 14320G>T missense_variant ORF1ab_pp1ab A4774S 1.00e+0 AY.111
V2615 14351G>T missense_variant ORF1ab_pp1ab R4784L 1.00e+0 AY.111
V2620 14413G>T missense_variant ORF1ab_pp1ab G4805C 1.00e+0 AY.111
V2631 14530G>T missense_variant ORF1ab_pp1ab D4844Y 1.00e+0 AY.111
V2632 14546G>T missense_variant ORF1ab_pp1ab R4849L 1.00e+0 AY.111
V2641 14659G>T missense_variant ORF1ab_pp1ab V4887F 1.00e+0 AY.111
V2652 14761G>T missense_variant ORF1ab_pp1ab A4921S 1.00e+0 AY.111
V2654 14774G>T missense_variant ORF1ab_pp1ab R4925L 1.00e+0 AY.111
V2656 14840G>T missense_variant ORF1ab_pp1ab R4947L 1.00e+0 AY.111
V2657 14845G>T missense_variant ORF1ab_pp1ab V4949L 1.00e+0 AY.111
V2660 14917G>T missense_variant ORF1ab_pp1ab A4973S 1.00e+0 AY.111
V2680 15095G>T missense_variant ORF1ab_pp1ab R5032L 1.00e+0 AY.111
V2687 15128G>T missense_variant ORF1ab_pp1ab R5043L 1.00e+0 AY.111
V269 439G>T missense_variant ORF1ab_pp1a D147Y 8.16e-1 AY.111
V270 442G>T stop_gained ORF1ab_pp1a E148* 1.00e+0 AY.111
V2702 15325G>T missense_variant ORF1ab_pp1ab D5109Y 1.00e+0 AY.111
V2706 15338G>T missense_variant ORF1ab_pp1ab R5113L 1.00e+0 AY.111
V2715 15415G>T missense_variant ORF1ab_pp1ab A5139S 1.00e+0 AY.111
V2716 15425G>T missense_variant ORF1ab_pp1ab R5142L 1.00e+0 AY.111
V2719 15457G>T missense_variant ORF1ab_pp1ab D5153Y 1.00e+0 AY.111
V2743 15697G>T missense_variant ORF1ab_pp1ab G5233C 1.00e+0 AY.111
V2745 15718G>T missense_variant ORF1ab_pp1ab V5240L 8.16e-1 AY.111
V2746 15749G>T missense_variant ORF1ab_pp1ab R5250L 1.00e+0 AY.111
V2747 15754G>T missense_variant ORF1ab_pp1ab V5252L 1.00e+0 AY.111
V2772 16034G>T missense_variant ORF1ab_pp1ab R5345L 1.00e+0 AY.111
V2796 16273G>T missense_variant ORF1ab_pp1ab D5425Y 1.00e+0 AY.111
V2812 16436G>T missense_variant ORF1ab_pp1ab R5479L 6.32e-1 AY.111
V2822 16505G>T missense_variant ORF1ab_pp1ab R5502L 1.00e+0 AY.111
V2823 16529G>T missense_variant ORF1ab_pp1ab R5510L 1.00e+0 AY.111
V2834 16607G>T missense_variant ORF1ab_pp1ab R5536L 1.00e+0 AY.111
V285 512G>T missense_variant ORF1ab_pp1a R171L 1.00e+0 AY.111
V287 524G>T missense_variant ORF1ab_pp1a R175L 1.00e+0 AY.111
V2880 16880G>T missense_variant ORF1ab_pp1ab R5627L 1.00e+0 AY.111
V2884 16909G>T missense_variant ORF1ab_pp1ab A5637S 1.00e+0 AY.111
V289 535G>T stop_gained ORF1ab_pp1a G179* 1.00e+0 AY.111
V2894 16982G>T missense_variant ORF1ab_pp1ab R5661L 1.00e+0 AY.111
V2896 16988G>T missense_variant ORF1ab_pp1ab R5663L 1.00e+0 AY.111
V29 -142G>T upstream_gene_variant ORF1ab_pp1a None 1.00e+0 AY.111
V2919 17173G>T missense_variant ORF1ab_pp1ab D5725Y 1.00e+0 AY.111
V2923 17198G>T missense_variant ORF1ab_pp1ab R5733L 1.00e+0 AY.111
V2933 17287G>T stop_gained ORF1ab_pp1ab G5763* 1.00e+0 AY.111
V2935 17297G>T missense_variant ORF1ab_pp1ab R5766L 1.00e+0 AY.111
V2936 17300G>T missense_variant ORF1ab_pp1ab R5767L 1.00e+0 AY.111
V2956 17455G>T missense_variant ORF1ab_pp1ab V5819L 1.00e+0 AY.111
V296 551G>T missense_variant ORF1ab_pp1a R184L 1.00e+0 AY.111
V2960 17477G>T missense_variant ORF1ab_pp1ab R5826L 1.00e+0 AY.111
V297 559G>T missense_variant ORF1ab_pp1a D187Y 1.00e+0 AY.111
V2992 17753G>T missense_variant ORF1ab_pp1ab R5918L 1.00e+0 AY.111
V3039 18002G>T missense_variant ORF1ab_pp1ab R6001L 1.00e+0 AY.111
V3040 18004G>T stop_gained ORF1ab_pp1ab E6002* 1.00e+0 AY.111
V3045 18026G>T missense_variant ORF1ab_pp1ab R6009L 1.00e+0 AY.111
V3048 18043G>T missense_variant ORF1ab_pp1ab D6015Y 1.00e+0 AY.111
V3049 18049G>T stop_gained ORF1ab_pp1ab E6017* 1.00e+0 AY.111
V3085 18263G>T missense_variant ORF1ab_pp1ab R6088L 1.00e+0 AY.111
V3092 18319G>T missense_variant ORF1ab_pp1ab V6107L 1.00e+0 AY.111
V3102 18389G>T missense_variant ORF1ab_pp1ab R6130L 1.00e+0 AY.111
V3105 18413G>T missense_variant ORF1ab_pp1ab R6138L 1.00e+0 AY.111
V311 620G>T missense_variant ORF1ab_pp1a R207L 1.00e+0 AY.111
V3130 18625G>T stop_gained ORF1ab_pp1ab E6209* 1.00e+0 AY.111
V3135 18641G>T missense_variant ORF1ab_pp1ab R6214L 1.00e+0 AY.111
V321 649G>T stop_gained ORF1ab_pp1a E217* 1.00e+0 AY.111
V3254 19538G>T missense_variant ORF1ab_pp1ab R6513L 1.00e+0 AY.111
V3293 19769G>T missense_variant ORF1ab_pp1ab R6590L 8.16e-1 AY.111
V3310 19870G>T missense_variant ORF1ab_pp1ab V6624L 1.00e+0 AY.111
V332 695G>T missense_variant ORF1ab_pp1a R232L 1.00e+0 AY.111
V3331 20027G>T missense_variant ORF1ab_pp1ab R6676L 1.00e+0 AY.111
V3334 20053G>T stop_gained ORF1ab_pp1ab E6685* 1.00e+0 AY.111
V3338 20062G>T missense_variant ORF1ab_pp1ab V6688F 1.00e+0 AY.111
V3345 20126G>T missense_variant ORF1ab_pp1ab R6709L 1.00e+0 AY.111
V336 731G>T missense_variant ORF1ab_pp1a R244L 1.00e+0 AY.111
V3415 20527G>T missense_variant ORF1ab_pp1ab A6843S 1.00e+0 AY.111
V3428 20683G>T missense_variant ORF1ab_pp1ab D6895Y 1.00e+0 AY.111
V3444 20791G>T missense_variant ORF1ab_pp1ab D6931Y 1.00e+0 AY.111
V3462 20893G>T missense_variant ORF1ab_pp1ab V6965L 1.00e+0 AY.111
V3475 20956G>T missense_variant ORF1ab_pp1ab A6986S 7.07e-1 AY.111
V3487 21041G>T missense_variant ORF1ab_pp1ab R7014L 1.00e+0 AY.111
V3488 21043G>T stop_gained ORF1ab_pp1ab E7015* 1.00e+0 AY.111
V3517 -5G>T upstream_gene_variant S None 1.00e+0 AY.111
V3562 101G>T missense_variant S R34L 1.00e+0 AY.111
V3621 367G>T missense_variant S A123S 1.00e+0 AY.111
V370 902G>T missense_variant ORF1ab_pp1a R301L 1.00e+0 AY.111
V38 -114G>T upstream_gene_variant ORF1ab_pp1a None 1.00e+0 AY.111
V3959 1730G>T missense_variant S R577L 1.00e+0 AY.111
V396 1003G>T missense_variant ORF1ab_pp1a D335Y 1.00e+0 AY.111
V3985 1901G>T missense_variant S R634L 1.00e+0 AY.111
V3991 1937G>T missense_variant S R646L 1.00e+0 AY.111
V4005 2014G>T missense_variant S A672S 1.00e+0 AY.111
V401 1024G>T stop_gained ORF1ab_pp1a E342* 1.00e+0 AY.111
V4024 2042C>T missense_variant S P681L 1.00e+0 AY.111
V4025 2045G>T missense_variant S R682L 1.00e+0 AY.111
V4026 2048G>T missense_variant S R683L 8.16e-1 AY.111
V4029 2054G>T missense_variant S R685L 1.00e+0 AY.111
V4065 2294G>T missense_variant S R765L 8.16e-1 AY.111
V41 -101G>T upstream_gene_variant ORF1ab_pp1a None 1.00e+0 AY.111
V4109 2569G>T missense_variant S G857C 1.00e+0 AY.111
V4150 2948G>T missense_variant S R983L 1.00e+0 AY.111
V4235 3554G>T missense_variant S R1185L 1.00e+0 AY.111
V4244 3595G>T missense_variant S D1199Y 1.00e+0 AY.111
V4289 3778G>T missense_variant S D1260Y 1.00e+0 AY.111
V4302 -6G>T upstream_gene_variant ORF3a None 1.00e+0 AY.111
V4347 91G>T missense_variant ORF3a A31S 8.16e-1 AY.111
V437 1156G>T stop_gained ORF1ab_pp1a E386* 1.00e+0 AY.111
V4379 130G>T stop_gained ORF3a G44* 1.00e+0 AY.111
V4391 148G>T missense_variant ORF3a V50F 1.00e+0 AY.111
V4410 175G>T missense_variant ORF3a A59S 1.00e+0 AY.111
V4459 289G>T missense_variant ORF3a V97F 1.00e+0 AY.111
V446 1193G>T missense_variant ORF1ab_pp1a R398L 1.00e+0 AY.111
V4512 401G>T missense_variant ORF3a R134L 7.07e-1 AY.111
V453 1205G>T missense_variant ORF1ab_pp1a R402L 1.00e+0 AY.111
V4614 751G>T missense_variant ORF3a G251C 1.00e+0 AY.111
V4620 760G>T stop_gained ORF3a G254* 1.00e+0 AY.111
V464 1277G>T missense_variant ORF1ab_pp1a R426L 1.00e+0 AY.111
V4672 70G>T missense_variant E V24L 8.16e-1 AY.111
V4678 145G>T missense_variant E V49L 1.00e+0 AY.111
V4685 172G>T missense_variant E V58F 1.00e+0 AY.111
V4686 182G>T missense_variant E R61L 8.16e-1 AY.111
V469 1285G>T missense_variant ORF1ab_pp1a A429S 1.00e+0 AY.111
V4722 16G>T missense_variant M G6C 1.00e+0 AY.111
V4757 232G>T missense_variant M G78C 8.16e-1 AY.111
V4763 247G>T missense_variant M A83S 1.00e+0 AY.111
V4772 320G>T missense_variant M R107L 1.00e+0 AY.111
V4782 473G>T missense_variant M R158L 1.00e+0 AY.111
V4784 521G>T missense_variant M R174L 1.00e+0 AY.111
V4788 593G>T missense_variant M R198L 1.00e+0 AY.111
V48 -92G>T upstream_gene_variant ORF1ab_pp1a None 6.32e-1 AY.111
V4800 13G>T missense_variant ORF6 V5F 1.00e+0 AY.111
V484 1330G>T stop_gained ORF1ab_pp1a E444* 1.00e+0 AY.111
V4864 37G>T missense_variant ORF7a A13S 1.00e+0 AY.111
V4895 121G>T stop_gained ORF7a E41* 8.16e-1 AY.111
V4930 208G>T missense_variant ORF7a G70C 8.16e-1 AY.111
V4932 211G>T missense_variant ORF7a V71L 8.16e-1 AY.111
V4937 220G>T missense_variant ORF7a V74F 1.00e+0 AY.111
V4943 233G>T missense_variant ORF7a R78L 1.00e+0 AY.111
V5056 127G>T missense_variant ORF7b A43S 1.00e+0 AY.111
V5061 -4G>T upstream_gene_variant ORF8 None 1.00e+0 AY.111
V511 1420G>T missense_variant ORF1ab_pp1a A474S 1.00e+0 AY.111
V5144 184G>T missense_variant ORF8 V62L 6.32e-1 AY.111
V5173 223G>T missense_variant ORF8 D75Y 1.00e+0 AY.111
V5176 229G>T missense_variant ORF8 G77C 1.00e+0 AY.111
V5196 302G>T missense_variant ORF8 R101L 1.00e+0 AY.111
V5209 340G>T missense_variant ORF8 V114F 1.00e+0 AY.111
V5212 344G>T missense_variant ORF8 R115L 1.00e+0 AY.111
V5234 -12G>T upstream_gene_variant N None 1.00e+0 AY.111
V5266 29G>T missense_variant N R10L 1.00e+0 AY.111
V5277 41G>T missense_variant N R14L 8.16e-1 AY.111
V5324 107G>T missense_variant N R36L 1.00e+0 AY.111
V5331 119G>T missense_variant N R40L 1.00e+0 AY.111
V5345 203G>T missense_variant N R68L 1.00e+0 AY.111
V5349 214G>T missense_variant N V72F 1.00e+0 AY.111
V5355 263G>T missense_variant N R88L 1.00e+0 AY.111
V5359 278G>T missense_variant N R93L 1.00e+0 AY.111
V5361 284G>T missense_variant N R95L 1.00e+0 AY.111
V5364 295G>T missense_variant N G99C 1.00e+0 AY.111
V5379 385G>T missense_variant N G129C 1.00e+0 AY.111
V5395 446G>T missense_variant N R149L 1.00e+0 AY.111
V5404 472G>T missense_variant N V158L 1.00e+0 AY.111
V5414 517G>T missense_variant N A173S 1.00e+0 AY.111
V5419 535G>T missense_variant N G179C 1.00e+0 AY.111
V5429 554G>T missense_variant N R185L 8.16e-1 AY.111
V5434 566G>T missense_variant N R189L 1.00e+0 AY.111
V5437 572G>T missense_variant N R191L 1.00e+0 AY.111
V5536 776G>T missense_variant N R259L 1.00e+0 AY.111
V5537 785G>T missense_variant N R262L 1.00e+0 AY.111
V554 1625G>T missense_variant ORF1ab_pp1a R542L 1.00e+0 AY.111
V5546 823G>T missense_variant N G275C 1.00e+0 AY.111
V5547 830G>T missense_variant N R277L 1.00e+0 AY.111
V556 1634G>T missense_variant ORF1ab_pp1a R545L 1.00e+0 AY.111
V5565 931G>T missense_variant N A311S 1.00e+0 AY.111
V5566 946G>T stop_gained N G316* 1.00e+0 AY.111
V5570 956G>T missense_variant N R319L 1.00e+0 AY.111
V5594 1075G>T missense_variant N A359S 7.07e-1 AY.111
V563 1649G>T missense_variant ORF1ab_pp1a R550L 1.00e+0 AY.111
V5688 16G>T missense_variant ORF10 V6F 1.00e+0 AY.111
V5690 22G>T missense_variant ORF10 A8S 1.00e+0 AY.111
V5708 71G>T missense_variant ORF10 R24L 8.16e-1 AY.111
V574 1679G>T missense_variant ORF1ab_pp1a R560L 1.00e+0 AY.111
V5762 *4350G>T downstream_gene_variant S None 8.16e-1 AY.111
V5781 *4360G>T downstream_gene_variant S None 7.07e-1 AY.111
V5790 *4367G>T downstream_gene_variant S None 8.16e-1 AY.111
V5794 *4371G>T downstream_gene_variant S None 1.00e+0 AY.111
V581 1696G>T missense_variant ORF1ab_pp1a A566S 1.00e+0 AY.111
V5970 726G>T synonymous_variant ORF1ab_pp1a T242T 8.16e-1 AY.111
V5998 921G>T synonymous_variant ORF1ab_pp1a A307A 1.00e+0 AY.111
V6010 999G>T synonymous_variant ORF1ab_pp1a T333T 1.00e+0 AY.111
V61 -68G>T upstream_gene_variant ORF1ab_pp1a None 8.16e-1 AY.111
V6121 1830G>T synonymous_variant ORF1ab_pp1a S610S 1.00e+0 AY.111
V6165 2133G>T synonymous_variant ORF1ab_pp1a T711T 1.00e+0 AY.111
V631 1879G>T missense_variant ORF1ab_pp1a V627F 1.00e+0 AY.111
V6413 3942G>T synonymous_variant ORF1ab_pp1a A1314A 7.07e-1 AY.111
V6420 3990G>T synonymous_variant ORF1ab_pp1a P1330P 1.00e+0 AY.111
V643 1933G>T missense_variant ORF1ab_pp1a G645C 7.07e-1 AY.111
V6481 4455G>T synonymous_variant ORF1ab_pp1a A1485A 8.16e-1 AY.111
V657 1981G>T missense_variant ORF1ab_pp1a G661C 1.00e+0 AY.111
V6610 5364G>T synonymous_variant ORF1ab_pp1a T1788T 1.00e+0 AY.111
V6634 5592G>T synonymous_variant ORF1ab_pp1a T1864T 1.00e+0 AY.111
V6686 6006G>T synonymous_variant ORF1ab_pp1a T2002T 8.16e-1 AY.111
V6695 6072G>T synonymous_variant ORF1ab_pp1a S2024S 6.32e-1 AY.111
V6704 6099G>T synonymous_variant ORF1ab_pp1a A2033A 8.16e-1 AY.111
V6765 6585G>T synonymous_variant ORF1ab_pp1a P2195P 1.00e+0 AY.111
V6830 7128G>T synonymous_variant ORF1ab_pp1a P2376P 7.07e-1 AY.111
V69 -62G>T upstream_gene_variant ORF1ab_pp1a None 8.16e-1 AY.111
V6908 7791G>T synonymous_variant ORF1ab_pp1a T2597T 1.00e+0 AY.111
V6950 8088G>T synonymous_variant ORF1ab_pp1a A2696A 1.00e+0 AY.111
V6952 8103G>T synonymous_variant ORF1ab_pp1a A2701A 1.00e+0 AY.111
V7125 9537G>T synonymous_variant ORF1ab_pp1a A3179A 1.00e+0 AY.111
V7140 9606G>T synonymous_variant ORF1ab_pp1a T3202T 1.00e+0 AY.111
V72 -58G>T upstream_gene_variant ORF1ab_pp1a None 1.00e+0 AY.111
V7246 10377G>T synonymous_variant ORF1ab_pp1a T3459T 1.00e+0 AY.111
V747 2359G>T missense_variant ORF1ab_pp1a G787W 1.00e+0 AY.111
V7480 12249G>T synonymous_variant ORF1ab_pp1a T4083T 8.16e-1 AY.111
V752 2374G>T stop_gained ORF1ab_pp1a E792* 1.00e+0 AY.111
V7559 12936G>T synonymous_variant ORF1ab_pp1a P4312P 1.00e+0 AY.111
V7602 13194G>T synonymous_variant ORF1ab_pp1a S4398S 8.16e-1 AY.111
V7604 13239G>T synonymous_variant ORF1ab_pp1ab P4413P 1.00e+0 AY.111
V762 2452G>T missense_variant ORF1ab_pp1a G818C 1.00e+0 AY.111
V7677 13854G>T synonymous_variant ORF1ab_pp1ab T4618T 1.00e+0 AY.111
V768 2482G>T missense_variant ORF1ab_pp1a D828Y 7.07e-1 AY.111
V7699 14004G>T synonymous_variant ORF1ab_pp1ab T4668T 1.00e+0 AY.111
V7751 14358G>T synonymous_variant ORF1ab_pp1ab T4786T 8.16e-1 AY.111
V782 2593G>T missense_variant ORF1ab_pp1a G865C 1.00e+0 AY.111
V7846 15108G>T synonymous_variant ORF1ab_pp1ab T5036T 8.16e-1 AY.111
V787 2614G>T missense_variant ORF1ab_pp1a A872S 1.00e+0 AY.111
V7951 15957G>T synonymous_variant ORF1ab_pp1ab P5319P 1.00e+0 AY.111
V8011 16383G>T synonymous_variant ORF1ab_pp1ab T5461T 7.07e-1 AY.111
V81 -47G>T upstream_gene_variant ORF1ab_pp1a None 8.16e-1 AY.111
V8101 17070G>T synonymous_variant ORF1ab_pp1ab T5690T 1.00e+0 AY.111
V8145 17415G>T synonymous_variant ORF1ab_pp1ab T5805T 7.07e-1 AY.111
V8252 18198G>T synonymous_variant ORF1ab_pp1ab P6066P 1.00e+0 AY.111
V8296 18492G>T synonymous_variant ORF1ab_pp1ab P6164P 8.16e-1 AY.111
V8328 18696G>T synonymous_variant ORF1ab_pp1ab A6232A 1.00e+0 AY.111
V8502 20205G>T synonymous_variant ORF1ab_pp1ab A6735A 1.00e+0 AY.111
V8519 20406G>T synonymous_variant ORF1ab_pp1ab A6802A 1.00e+0 AY.111
V8547 20667G>T synonymous_variant ORF1ab_pp1ab T6889T 8.16e-1 AY.111
V8549 20673G>T synonymous_variant ORF1ab_pp1ab T6891T 8.16e-1 AY.111
V8678 336G>T synonymous_variant S S112S 1.00e+0 AY.111
V8698 489G>T synonymous_variant S A163A 1.00e+0 AY.111
V8711 624G>T synonymous_variant S T208T 1.00e+0 AY.111
V8721 663G>T synonymous_variant S S221S 8.16e-1 AY.111
V8749 906G>T synonymous_variant S T302T 7.07e-1 AY.111
V882 2977G>T missense_variant ORF1ab_pp1a G993C 1.00e+0 AY.111
V8973 2637G>T synonymous_variant S A879A 7.07e-1 AY.111
V9003 2883G>T synonymous_variant S T961T 8.16e-1 AY.111
V9151 102G>T synonymous_variant ORF3a T34T 8.16e-1 AY.111
V9253 801G>T synonymous_variant ORF3a P267P 1.00e+0 AY.111
V9254 804G>T synonymous_variant ORF3a T268T 1.00e+0 AY.111
V9262 18G>T synonymous_variant E S6S 1.00e+0 AY.111
V9274 108G>T synonymous_variant E A36A 1.00e+0 AY.111
V9330 312G>T synonymous_variant M A104A 8.16e-1 AY.111
V9332 318G>T synonymous_variant M T106T 6.32e-1 AY.111
V9376 525G>T synonymous_variant M T175T 1.00e+0 AY.111
V9381 552G>T synonymous_variant M S184S 1.00e+0 AY.111
V9550 309G>T synonymous_variant ORF8 S103S 1.00e+0 AY.111
V9568 48G>T synonymous_variant N T16T 1.00e+0 AY.111
V9596 150G>T synonymous_variant N A50A 1.00e+0 AY.111
V9753 939G>T synonymous_variant N A313A 1.00e+0 AY.111
V9758 954G>T synonymous_variant N S318S 8.16e-1 AY.111
V978 3319G>T stop_gained ORF1ab_pp1a G1107* 1.00e+0 AY.111
V9824 30G>T synonymous_variant ORF10 P10P 1.00e+0 AY.111
V9825 36G>T synonymous_variant ORF10 T12T 1.00e+0 AY.111
V995 3388C>T missense_variant ORF1ab_pp1a L1130F 7.07e-1 AY.111
V1002 3424G>T stop_gained ORF1ab_pp1a E1142* 1.00e+0 AY.112
V1026 3509G>T missense_variant ORF1ab_pp1a R1170L 1.00e+0 AY.112
V103 -20G>T upstream_gene_variant ORF1ab_pp1a None 7.75e-1 AY.112
V11 -194G>T upstream_gene_variant ORF1ab_pp1a None 8.16e-1 AY.112
V111 -10G>T upstream_gene_variant ORF1ab_pp1a None 8.66e-1 AY.112
V1133 4127G>T missense_variant ORF1ab_pp1a R1376L 1.00e+0 AY.112
V1139 4157G>T missense_variant ORF1ab_pp1a R1386L 1.00e+0 AY.112
V1146 4211G>T missense_variant ORF1ab_pp1a R1404L 1.00e+0 AY.112
V1159 4318G>T missense_variant ORF1ab_pp1a D1440Y 1.00e+0 AY.112
V1164 4391G>T missense_variant ORF1ab_pp1a R1464L 1.00e+0 AY.112
V118 28G>T stop_gained ORF1ab_pp1a E10* 1.00e+0 AY.112
V120 40G>T missense_variant ORF1ab_pp1a V14F 1.00e+0 AY.112
V124 71G>T missense_variant ORF1ab_pp1a R24L 1.00e+0 AY.112
V125 73G>T missense_variant ORF1ab_pp1a D25Y 1.00e+0 AY.112
V1252 4883G>T missense_variant ORF1ab_pp1a R1628L 8.66e-1 AY.112
V126 76G>T missense_variant ORF1ab_pp1a V26L 1.00e+0 AY.112
V130 82G>T missense_variant ORF1ab_pp1a V28L 8.66e-1 AY.112
V132 86G>T missense_variant ORF1ab_pp1a R29L 1.00e+0 AY.112
V1345 5548G>T missense_variant ORF1ab_pp1a G1850C 1.00e+0 AY.112
V1374 5767G>T missense_variant ORF1ab_pp1a A1923S 1.00e+0 AY.112
V139 103G>T missense_variant ORF1ab_pp1a V35L 1.00e+0 AY.112
V1409 6032G>T missense_variant ORF1ab_pp1a R2011L 1.00e+0 AY.112
V1432 6097G>T missense_variant ORF1ab_pp1a A2033S 6.55e-1 AY.112
V1439 6124G>T stop_gained ORF1ab_pp1a E2042* 1.00e+0 AY.112
V146 128G>T missense_variant ORF1ab_pp1a R43L 1.00e+0 AY.112
V1464 6208G>T stop_gained ORF1ab_pp1a E2070* 1.00e+0 AY.112
V1544 6476G>T missense_variant ORF1ab_pp1a R2159L 8.66e-1 AY.112
V1546 6488G>T missense_variant ORF1ab_pp1a R2163L 7.75e-1 AY.112
V1565 6619G>T missense_variant ORF1ab_pp1a G2207C 7.07e-1 AY.112
V1578 6742G>T missense_variant ORF1ab_pp1a A2248S 1.00e+0 AY.112
V162 178G>T missense_variant ORF1ab_pp1a V60F 1.00e+0 AY.112
V1644 7207G>T missense_variant ORF1ab_pp1a G2403C 1.00e+0 AY.112
V1649 7244G>T missense_variant ORF1ab_pp1a R2415L 1.00e+0 AY.112
V1651 7264G>T stop_gained ORF1ab_pp1a E2422* 1.00e+0 AY.112
V1662 7471G>T missense_variant ORF1ab_pp1a V2491F 1.00e+0 AY.112
V168 218G>T missense_variant ORF1ab_pp1a R73L 1.00e+0 AY.112
V1712 7783G>T missense_variant ORF1ab_pp1a V2595F 1.00e+0 AY.112
V1716 7810G>T missense_variant ORF1ab_pp1a V2604L 1.00e+0 AY.112
V1743 7913G>T missense_variant ORF1ab_pp1a R2638L 1.00e+0 AY.112
V175 230G>T missense_variant ORF1ab_pp1a R77L 1.00e+0 AY.112
V1753 8002G>T missense_variant ORF1ab_pp1a D2668Y 1.00e+0 AY.112
V1760 8057G>T missense_variant ORF1ab_pp1a R2686L 1.00e+0 AY.112
V1766 8090G>T missense_variant ORF1ab_pp1a R2697L 1.00e+0 AY.112
V1774 8143G>T missense_variant ORF1ab_pp1a V2715F 1.00e+0 AY.112
V1777 8177G>T missense_variant ORF1ab_pp1a R2726L 1.00e+0 AY.112
V1778 8189G>T missense_variant ORF1ab_pp1a R2730L 1.00e+0 AY.112
V1819 8453G>T missense_variant ORF1ab_pp1a R2818L 1.00e+0 AY.112
V1829 8522G>T missense_variant ORF1ab_pp1a R2841L 1.00e+0 AY.112
V1846 8596G>T missense_variant ORF1ab_pp1a V2866L 8.66e-1 AY.112
V1857 8624G>T missense_variant ORF1ab_pp1a R2875L 8.66e-1 AY.112
V1883 8846G>T missense_variant ORF1ab_pp1a R2949L 1.00e+0 AY.112
V1886 8858G>T missense_variant ORF1ab_pp1a R2953L 1.00e+0 AY.112
V1900 8959G>T missense_variant ORF1ab_pp1a G2987C 1.00e+0 AY.112
V1961 9491G>T missense_variant ORF1ab_pp1a R3164L 1.00e+0 AY.112
V1964 9581G>T missense_variant ORF1ab_pp1a R3194L 1.00e+0 AY.112
V1993 9874G>T missense_variant ORF1ab_pp1a G3292C 1.00e+0 AY.112
V1997 9892G>T missense_variant ORF1ab_pp1a V3298L 7.07e-1 AY.112
V2005 9968G>T missense_variant ORF1ab_pp1a R3323L 1.00e+0 AY.112
V2030 10103G>T missense_variant ORF1ab_pp1a R3368L 1.00e+0 AY.112
V2055 10417G>T missense_variant ORF1ab_pp1a A3473S 1.00e+0 AY.112
V2060 10454G>T missense_variant ORF1ab_pp1a R3485L 1.00e+0 AY.112
V207 277G>T stop_gained ORF1ab_pp1a E93* 1.00e+0 AY.112
V2079 10570G>T missense_variant ORF1ab_pp1a V3524F 1.00e+0 AY.112
V2087 10625G>T missense_variant ORF1ab_pp1a R3542L 1.00e+0 AY.112
V21 -165G>T upstream_gene_variant ORF1ab_pp1a None 7.75e-1 AY.112
V212 292G>T missense_variant ORF1ab_pp1a G98C 1.00e+0 AY.112
V215 296G>T missense_variant ORF1ab_pp1a R99L 1.00e+0 AY.112
V2151 10985G>T missense_variant ORF1ab_pp1a R3662L 1.00e+0 AY.112
V2238 11405G>T missense_variant ORF1ab_pp1a R3802L 1.00e+0 AY.112
V228 337G>T stop_gained ORF1ab_pp1a E113* 1.00e+0 AY.112
V2310 11978G>T missense_variant ORF1ab_pp1a R3993L 1.00e+0 AY.112
V2313 11996G>T missense_variant ORF1ab_pp1a R3999L 1.00e+0 AY.112
V2358 12449G>T missense_variant ORF1ab_pp1a R4150L 1.00e+0 AY.112
V2362 12469G>T missense_variant ORF1ab_pp1a G4157C 1.00e+0 AY.112
V2386 12559G>T missense_variant ORF1ab_pp1a D4187Y 1.00e+0 AY.112
V239 356G>T missense_variant ORF1ab_pp1a R119L 8.66e-1 AY.112
V2406 12752G>T missense_variant ORF1ab_pp1a R4251L 1.00e+0 AY.112
V2424 12992G>T missense_variant ORF1ab_pp1a R4331L 1.00e+0 AY.112
V243 371G>T missense_variant ORF1ab_pp1a R124L 1.00e+0 AY.112
V2438 13114G>T missense_variant ORF1ab_pp1a V4372F 1.00e+0 AY.112
V2439 13120G>T missense_variant ORF1ab_pp1a G4374C 1.00e+0 AY.112
V2445 13160G>T missense_variant ORF1ab_pp1a R4387L 1.00e+0 AY.112
V2446 13162G>T stop_gained ORF1ab_pp1a E4388* 1.00e+0 AY.112
V245 379G>T missense_variant ORF1ab_pp1a G127C 1.00e+0 AY.112
V2452 13204G>T missense_variant ORF1ab_pp1a G4402W 1.00e+0 AY.112
V2453 13213G>T missense_variant ORF1ab_pp1ab G4405C 1.00e+0 AY.112
V2456 13229G>T missense_variant ORF1ab_pp1ab R4410L 1.00e+0 AY.112
V2459 13243G>T missense_variant ORF1ab_pp1ab G4415C 1.00e+0 AY.112
V2463 13267G>T missense_variant ORF1ab_pp1ab V4423L 1.00e+0 AY.112
V2470 13340G>T missense_variant ORF1ab_pp1ab R4447L 1.00e+0 AY.112
V2474 13357G>T stop_gained ORF1ab_pp1ab E4453* 1.00e+0 AY.112
V2496 13498G>T missense_variant ORF1ab_pp1ab G4500C 1.00e+0 AY.112
V2500 13523G>T missense_variant ORF1ab_pp1ab R4508L 1.00e+0 AY.112
V2503 13529G>T missense_variant ORF1ab_pp1ab R4510L 1.00e+0 AY.112
V2507 13558G>T missense_variant ORF1ab_pp1ab V4520F 1.00e+0 AY.112
V251 409G>T missense_variant ORF1ab_pp1a G137C 8.66e-1 AY.112
V2528 13694G>T missense_variant ORF1ab_pp1ab R4565L 1.00e+0 AY.112
V2529 13696G>T missense_variant ORF1ab_pp1ab V4566L 1.00e+0 AY.112
V2532 13702G>T missense_variant ORF1ab_pp1ab A4568S 1.00e+0 AY.112
V2534 13718G>T missense_variant ORF1ab_pp1ab R4573L 1.00e+0 AY.112
V2535 13724G>T missense_variant ORF1ab_pp1ab R4575L 1.00e+0 AY.112
V2540 13766G>T missense_variant ORF1ab_pp1ab R4589L 8.66e-1 AY.112
V2543 13834G>T missense_variant ORF1ab_pp1ab G4612C 1.00e+0 AY.112
V255 412G>T missense_variant ORF1ab_pp1a A138S 1.00e+0 AY.112
V257 415G>T missense_variant ORF1ab_pp1a D139Y 1.00e+0 AY.112
V2584 14030G>T missense_variant ORF1ab_pp1ab R4677L 1.00e+0 AY.112
V2612 14320G>T missense_variant ORF1ab_pp1ab A4774S 1.00e+0 AY.112
V2615 14351G>T missense_variant ORF1ab_pp1ab R4784L 1.00e+0 AY.112
V2620 14413G>T missense_variant ORF1ab_pp1ab G4805C 1.00e+0 AY.112
V2631 14530G>T missense_variant ORF1ab_pp1ab D4844Y 1.00e+0 AY.112
V2632 14546G>T missense_variant ORF1ab_pp1ab R4849L 1.00e+0 AY.112
V2641 14659G>T missense_variant ORF1ab_pp1ab V4887F 1.00e+0 AY.112
V2652 14761G>T missense_variant ORF1ab_pp1ab A4921S 1.00e+0 AY.112
V2654 14774G>T missense_variant ORF1ab_pp1ab R4925L 1.00e+0 AY.112
V2656 14840G>T missense_variant ORF1ab_pp1ab R4947L 1.00e+0 AY.112
V2657 14845G>T missense_variant ORF1ab_pp1ab V4949L 1.00e+0 AY.112
V2660 14917G>T missense_variant ORF1ab_pp1ab A4973S 8.66e-1 AY.112
V2680 15095G>T missense_variant ORF1ab_pp1ab R5032L 1.00e+0 AY.112
V2687 15128G>T missense_variant ORF1ab_pp1ab R5043L 8.66e-1 AY.112
V269 439G>T missense_variant ORF1ab_pp1a D147Y 1.00e+0 AY.112
V270 442G>T stop_gained ORF1ab_pp1a E148* 1.00e+0 AY.112
V2702 15325G>T missense_variant ORF1ab_pp1ab D5109Y 1.00e+0 AY.112
V2706 15338G>T missense_variant ORF1ab_pp1ab R5113L 1.00e+0 AY.112
V2715 15415G>T missense_variant ORF1ab_pp1ab A5139S 1.00e+0 AY.112
V2719 15457G>T missense_variant ORF1ab_pp1ab D5153Y 1.00e+0 AY.112
V2743 15697G>T missense_variant ORF1ab_pp1ab G5233C 1.00e+0 AY.112
V2745 15718G>T missense_variant ORF1ab_pp1ab V5240L 7.07e-1 AY.112
V2746 15749G>T missense_variant ORF1ab_pp1ab R5250L 1.00e+0 AY.112
V2747 15754G>T missense_variant ORF1ab_pp1ab V5252L 1.00e+0 AY.112
V2772 16034G>T missense_variant ORF1ab_pp1ab R5345L 1.00e+0 AY.112
V2796 16273G>T missense_variant ORF1ab_pp1ab D5425Y 1.00e+0 AY.112
V2812 16436G>T missense_variant ORF1ab_pp1ab R5479L 7.75e-1 AY.112
V2822 16505G>T missense_variant ORF1ab_pp1ab R5502L 1.00e+0 AY.112
V2823 16529G>T missense_variant ORF1ab_pp1ab R5510L 1.00e+0 AY.112
V2834 16607G>T missense_variant ORF1ab_pp1ab R5536L 1.00e+0 AY.112
V285 512G>T missense_variant ORF1ab_pp1a R171L 1.00e+0 AY.112
V287 524G>T missense_variant ORF1ab_pp1a R175L 1.00e+0 AY.112
V2880 16880G>T missense_variant ORF1ab_pp1ab R5627L 1.00e+0 AY.112
V2884 16909G>T missense_variant ORF1ab_pp1ab A5637S 1.00e+0 AY.112
V289 535G>T stop_gained ORF1ab_pp1a G179* 1.00e+0 AY.112
V2894 16982G>T missense_variant ORF1ab_pp1ab R5661L 1.00e+0 AY.112
V2896 16988G>T missense_variant ORF1ab_pp1ab R5663L 1.00e+0 AY.112
V29 -142G>T upstream_gene_variant ORF1ab_pp1a None 8.66e-1 AY.112
V2919 17173G>T missense_variant ORF1ab_pp1ab D5725Y 1.00e+0 AY.112
V2923 17198G>T missense_variant ORF1ab_pp1ab R5733L 1.00e+0 AY.112
V2933 17287G>T stop_gained ORF1ab_pp1ab G5763* 1.00e+0 AY.112
V2935 17297G>T missense_variant ORF1ab_pp1ab R5766L 1.00e+0 AY.112
V2936 17300G>T missense_variant ORF1ab_pp1ab R5767L 1.00e+0 AY.112
V2956 17455G>T missense_variant ORF1ab_pp1ab V5819L 1.00e+0 AY.112
V296 551G>T missense_variant ORF1ab_pp1a R184L 8.66e-1 AY.112
V2960 17477G>T missense_variant ORF1ab_pp1ab R5826L 1.00e+0 AY.112
V297 559G>T missense_variant ORF1ab_pp1a D187Y 1.00e+0 AY.112
V2992 17753G>T missense_variant ORF1ab_pp1ab R5918L 1.00e+0 AY.112
V3039 18002G>T missense_variant ORF1ab_pp1ab R6001L 8.66e-1 AY.112
V3040 18004G>T stop_gained ORF1ab_pp1ab E6002* 1.00e+0 AY.112
V3045 18026G>T missense_variant ORF1ab_pp1ab R6009L 1.00e+0 AY.112
V3048 18043G>T missense_variant ORF1ab_pp1ab D6015Y 1.00e+0 AY.112
V3049 18049G>T stop_gained ORF1ab_pp1ab E6017* 1.00e+0 AY.112
V3085 18263G>T missense_variant ORF1ab_pp1ab R6088L 1.00e+0 AY.112
V3092 18319G>T missense_variant ORF1ab_pp1ab V6107L 6.55e-1 AY.112
V3102 18389G>T missense_variant ORF1ab_pp1ab R6130L 1.00e+0 AY.112
V3105 18413G>T missense_variant ORF1ab_pp1ab R6138L 7.07e-1 AY.112
V3115 18481G>T missense_variant ORF1ab_pp1ab V6161F 8.66e-1 AY.112
V3130 18625G>T stop_gained ORF1ab_pp1ab E6209* 1.00e+0 AY.112
V3135 18641G>T missense_variant ORF1ab_pp1ab R6214L 1.00e+0 AY.112
V3187 18943G>T missense_variant ORF1ab_pp1ab D6315Y 8.16e-1 AY.112
V321 649G>T stop_gained ORF1ab_pp1a E217* 1.00e+0 AY.112
V3254 19538G>T missense_variant ORF1ab_pp1ab R6513L 1.00e+0 AY.112
V3293 19769G>T missense_variant ORF1ab_pp1ab R6590L 1.00e+0 AY.112
V332 695G>T missense_variant ORF1ab_pp1a R232L 1.00e+0 AY.112
V3331 20027G>T missense_variant ORF1ab_pp1ab R6676L 1.00e+0 AY.112
V3334 20053G>T stop_gained ORF1ab_pp1ab E6685* 1.00e+0 AY.112
V3338 20062G>T missense_variant ORF1ab_pp1ab V6688F 8.66e-1 AY.112
V3345 20126G>T missense_variant ORF1ab_pp1ab R6709L 7.07e-1 AY.112
V336 731G>T missense_variant ORF1ab_pp1a R244L 1.00e+0 AY.112
V3415 20527G>T missense_variant ORF1ab_pp1ab A6843S 1.00e+0 AY.112
V3428 20683G>T missense_variant ORF1ab_pp1ab D6895Y 1.00e+0 AY.112
V3444 20791G>T missense_variant ORF1ab_pp1ab D6931Y 1.00e+0 AY.112
V3462 20893G>T missense_variant ORF1ab_pp1ab V6965L 1.00e+0 AY.112
V3487 21041G>T missense_variant ORF1ab_pp1ab R7014L 8.66e-1 AY.112
V3488 21043G>T stop_gained ORF1ab_pp1ab E7015* 1.00e+0 AY.112
V3517 -5G>T upstream_gene_variant S None 1.00e+0 AY.112
V3562 101G>T missense_variant S R34L 7.75e-1 AY.112
V3621 367G>T missense_variant S A123S 7.75e-1 AY.112
V370 902G>T missense_variant ORF1ab_pp1a R301L 8.66e-1 AY.112
V38 -114G>T upstream_gene_variant ORF1ab_pp1a None 1.00e+0 AY.112
V3959 1730G>T missense_variant S R577L 1.00e+0 AY.112
V396 1003G>T missense_variant ORF1ab_pp1a D335Y 1.00e+0 AY.112
V3985 1901G>T missense_variant S R634L 1.00e+0 AY.112
V3991 1937G>T missense_variant S R646L 1.00e+0 AY.112
V4005 2014G>T missense_variant S A672S 1.00e+0 AY.112
V401 1024G>T stop_gained ORF1ab_pp1a E342* 1.00e+0 AY.112
V4024 2042C>T missense_variant S P681L 6.55e-1 AY.112
V4025 2045G>T missense_variant S R682L 8.66e-1 AY.112
V4026 2048G>T missense_variant S R683L 7.07e-1 AY.112
V4029 2054G>T missense_variant S R685L 1.00e+0 AY.112
V4065 2294G>T missense_variant S R765L 7.75e-1 AY.112
V41 -101G>T upstream_gene_variant ORF1ab_pp1a None 8.66e-1 AY.112
V4109 2569G>T missense_variant S G857C 1.00e+0 AY.112
V4150 2948G>T missense_variant S R983L 1.00e+0 AY.112
V4185 3272G>T missense_variant S R1091L 6.12e-1 AY.112
V4235 3554G>T missense_variant S R1185L 1.00e+0 AY.112
V4244 3595G>T missense_variant S D1199Y 7.07e-1 AY.112
V4302 -6G>T upstream_gene_variant ORF3a None 1.00e+0 AY.112
V4347 91G>T missense_variant ORF3a A31S 8.66e-1 AY.112
V437 1156G>T stop_gained ORF1ab_pp1a E386* 1.00e+0 AY.112
V4379 130G>T stop_gained ORF3a G44* 1.00e+0 AY.112
V4391 148G>T missense_variant ORF3a V50F 6.55e-1 AY.112
V4459 289G>T missense_variant ORF3a V97F 8.66e-1 AY.112
V446 1193G>T missense_variant ORF1ab_pp1a R398L 1.00e+0 AY.112
V453 1205G>T missense_variant ORF1ab_pp1a R402L 1.00e+0 AY.112
V4614 751G>T missense_variant ORF3a G251C 1.00e+0 AY.112
V4620 760G>T stop_gained ORF3a G254* 6.55e-1 AY.112
V464 1277G>T missense_variant ORF1ab_pp1a R426L 7.75e-1 AY.112
V4672 70G>T missense_variant E V24L 8.66e-1 AY.112
V4678 145G>T missense_variant E V49L 7.07e-1 AY.112
V4686 182G>T missense_variant E R61L 8.66e-1 AY.112
V469 1285G>T missense_variant ORF1ab_pp1a A429S 8.66e-1 AY.112
V4722 16G>T missense_variant M G6C 1.00e+0 AY.112
V4757 232G>T missense_variant M G78C 6.55e-1 AY.112
V4772 320G>T missense_variant M R107L 8.66e-1 AY.112
V4782 473G>T missense_variant M R158L 7.07e-1 AY.112
V4784 521G>T missense_variant M R174L 7.75e-1 AY.112
V4788 593G>T missense_variant M R198L 1.00e+0 AY.112
V4800 13G>T missense_variant ORF6 V5F 7.75e-1 AY.112
V484 1330G>T stop_gained ORF1ab_pp1a E444* 1.00e+0 AY.112
V4864 37G>T missense_variant ORF7a A13S 6.12e-1 AY.112
V4932 211G>T missense_variant ORF7a V71L 8.66e-1 AY.112
V4937 220G>T missense_variant ORF7a V74F 8.66e-1 AY.112
V4943 233G>T missense_variant ORF7a R78L 7.75e-1 AY.112
V5056 127G>T missense_variant ORF7b A43S 1.00e+0 AY.112
V5061 -4G>T upstream_gene_variant ORF8 None 8.66e-1 AY.112
V5173 223G>T missense_variant ORF8 D75Y 7.75e-1 AY.112
V5176 229G>T missense_variant ORF8 G77C 7.75e-1 AY.112
V5209 340G>T missense_variant ORF8 V114F 8.16e-1 AY.112
V5234 -12G>T upstream_gene_variant N None 8.16e-1 AY.112
V5266 29G>T missense_variant N R10L 1.00e+0 AY.112
V5277 41G>T missense_variant N R14L 6.12e-1 AY.112
V5324 107G>T missense_variant N R36L 8.66e-1 AY.112
V5331 119G>T missense_variant N R40L 7.07e-1 AY.112
V5333 122G>T missense_variant N R41L 6.12e-1 AY.112
V5345 203G>T missense_variant N R68L 1.00e+0 AY.112
V5349 214G>T missense_variant N V72F 1.00e+0 AY.112
V5355 263G>T missense_variant N R88L 1.00e+0 AY.112
V5359 278G>T missense_variant N R93L 1.00e+0 AY.112
V5361 284G>T missense_variant N R95L 8.66e-1 AY.112
V5364 295G>T missense_variant N G99C 1.00e+0 AY.112
V5379 385G>T missense_variant N G129C 1.00e+0 AY.112
V5395 446G>T missense_variant N R149L 1.00e+0 AY.112
V5404 472G>T missense_variant N V158L 1.00e+0 AY.112
V5414 517G>T missense_variant N A173S 8.66e-1 AY.112
V5419 535G>T missense_variant N G179C 1.00e+0 AY.112
V5429 554G>T missense_variant N R185L 8.66e-1 AY.112
V5434 566G>T missense_variant N R189L 7.75e-1 AY.112
V5437 572G>T missense_variant N R191L 1.00e+0 AY.112
V5536 776G>T missense_variant N R259L 1.00e+0 AY.112
V5537 785G>T missense_variant N R262L 1.00e+0 AY.112
V554 1625G>T missense_variant ORF1ab_pp1a R542L 8.66e-1 AY.112
V5546 823G>T missense_variant N G275C 1.00e+0 AY.112
V5547 830G>T missense_variant N R277L 1.00e+0 AY.112
V556 1634G>T missense_variant ORF1ab_pp1a R545L 8.16e-1 AY.112
V5565 931G>T missense_variant N A311S 7.75e-1 AY.112
V5566 946G>T stop_gained N G316* 1.00e+0 AY.112
V5570 956G>T missense_variant N R319L 1.00e+0 AY.112
V563 1649G>T missense_variant ORF1ab_pp1a R550L 1.00e+0 AY.112
V5688 16G>T missense_variant ORF10 V6F 7.07e-1 AY.112
V574 1679G>T missense_variant ORF1ab_pp1a R560L 8.66e-1 AY.112
V581 1696G>T missense_variant ORF1ab_pp1a A566S 1.00e+0 AY.112
V5970 726G>T synonymous_variant ORF1ab_pp1a T242T 8.66e-1 AY.112
V5998 921G>T synonymous_variant ORF1ab_pp1a A307A 7.75e-1 AY.112
V6010 999G>T synonymous_variant ORF1ab_pp1a T333T 7.75e-1 AY.112
V61 -68G>T upstream_gene_variant ORF1ab_pp1a None 7.07e-1 AY.112
V6121 1830G>T synonymous_variant ORF1ab_pp1a S610S 7.75e-1 AY.112
V6165 2133G>T synonymous_variant ORF1ab_pp1a T711T 8.66e-1 AY.112
V643 1933G>T missense_variant ORF1ab_pp1a G645C 1.00e+0 AY.112
V657 1981G>T missense_variant ORF1ab_pp1a G661C 8.66e-1 AY.112
V6686 6006G>T synonymous_variant ORF1ab_pp1a T2002T 8.66e-1 AY.112
V6704 6099G>T synonymous_variant ORF1ab_pp1a A2033A 1.00e+0 AY.112
V6765 6585G>T synonymous_variant ORF1ab_pp1a P2195P 6.12e-1 AY.112
V6900 7752G>T synonymous_variant ORF1ab_pp1a A2584A 7.07e-1 AY.112
V6908 7791G>T synonymous_variant ORF1ab_pp1a T2597T 8.66e-1 AY.112
V6950 8088G>T synonymous_variant ORF1ab_pp1a A2696A 1.00e+0 AY.112
V6952 8103G>T synonymous_variant ORF1ab_pp1a A2701A 6.12e-1 AY.112
V7140 9606G>T synonymous_variant ORF1ab_pp1a T3202T 1.00e+0 AY.112
V747 2359G>T missense_variant ORF1ab_pp1a G787W 1.00e+0 AY.112
V752 2374G>T stop_gained ORF1ab_pp1a E792* 1.00e+0 AY.112
V7567 12975G>T synonymous_variant ORF1ab_pp1a S4325S 8.66e-1 AY.112
V7604 13239G>T synonymous_variant ORF1ab_pp1ab P4413P 7.75e-1 AY.112
V762 2452G>T missense_variant ORF1ab_pp1a G818C 1.00e+0 AY.112
V7699 14004G>T synonymous_variant ORF1ab_pp1ab T4668T 1.00e+0 AY.112
V7751 14358G>T synonymous_variant ORF1ab_pp1ab T4786T 8.66e-1 AY.112
V782 2593G>T missense_variant ORF1ab_pp1a G865C 1.00e+0 AY.112
V787 2614G>T missense_variant ORF1ab_pp1a A872S 8.66e-1 AY.112
V7951 15957G>T synonymous_variant ORF1ab_pp1ab P5319P 1.00e+0 AY.112
V8101 17070G>T synonymous_variant ORF1ab_pp1ab T5690T 7.07e-1 AY.112
V8328 18696G>T synonymous_variant ORF1ab_pp1ab A6232A 7.75e-1 AY.112
V8502 20205G>T synonymous_variant ORF1ab_pp1ab A6735A 1.00e+0 AY.112
V8519 20406G>T synonymous_variant ORF1ab_pp1ab A6802A 1.00e+0 AY.112
V8678 336G>T synonymous_variant S S112S 8.66e-1 AY.112
V8711 624G>T synonymous_variant S T208T 1.00e+0 AY.112
V882 2977G>T missense_variant ORF1ab_pp1a G993C 7.75e-1 AY.112
V9154 108G>T synonymous_variant ORF3a P36P 7.07e-1 AY.112
V9253 801G>T synonymous_variant ORF3a P267P 1.00e+0 AY.112
V9254 804G>T synonymous_variant ORF3a T268T 1.00e+0 AY.112
V9256 807G>T synonymous_variant ORF3a T269T 6.55e-1 AY.112
V9262 18G>T synonymous_variant E S6S 7.75e-1 AY.112
V9274 108G>T synonymous_variant E A36A 1.00e+0 AY.112
V9480 315G>T synonymous_variant ORF7a A105A 8.66e-1 AY.112
V9550 309G>T synonymous_variant ORF8 S103S 1.00e+0 AY.112
V9596 150G>T synonymous_variant N A50A 1.00e+0 AY.112
V978 3319G>T stop_gained ORF1ab_pp1a G1107* 1.00e+0 AY.112
V9824 30G>T synonymous_variant ORF10 P10P 8.66e-1 AY.112
V9825 36G>T synonymous_variant ORF10 T12T 7.07e-1 AY.112
V988 3355G>T missense_variant ORF1ab_pp1a G1119C 8.66e-1 AY.112
V1002 3424G>T stop_gained ORF1ab_pp1a E1142* 1.00e+0 AY.120.2
V1026 3509G>T missense_variant ORF1ab_pp1a R1170L 1.00e+0 AY.120.2
V103 -20G>T upstream_gene_variant ORF1ab_pp1a None 1.00e+0 AY.120.2
V1047 3610G>T missense_variant ORF1ab_pp1a A1204S 1.00e+0 AY.120.2
V111 -10G>T upstream_gene_variant ORF1ab_pp1a None 1.00e+0 AY.120.2
V1133 4127G>T missense_variant ORF1ab_pp1a R1376L 1.00e+0 AY.120.2
V1139 4157G>T missense_variant ORF1ab_pp1a R1386L 1.00e+0 AY.120.2
V1146 4211G>T missense_variant ORF1ab_pp1a R1404L 1.00e+0 AY.120.2
V1159 4318G>T missense_variant ORF1ab_pp1a D1440Y 1.00e+0 AY.120.2
V1164 4391G>T missense_variant ORF1ab_pp1a R1464L 1.00e+0 AY.120.2
V118 28G>T stop_gained ORF1ab_pp1a E10* 1.00e+0 AY.120.2
V120 40G>T missense_variant ORF1ab_pp1a V14F 1.00e+0 AY.120.2
V124 71G>T missense_variant ORF1ab_pp1a R24L 1.00e+0 AY.120.2
V125 73G>T missense_variant ORF1ab_pp1a D25Y 1.00e+0 AY.120.2
V1252 4883G>T missense_variant ORF1ab_pp1a R1628L 1.00e+0 AY.120.2
V126 76G>T missense_variant ORF1ab_pp1a V26L 1.00e+0 AY.120.2
V1298 5248G>T missense_variant ORF1ab_pp1a V1750L 1.00e+0 AY.120.2
V130 82G>T missense_variant ORF1ab_pp1a V28L 1.00e+0 AY.120.2
V132 86G>T missense_variant ORF1ab_pp1a R29L 1.00e+0 AY.120.2
V1345 5548G>T missense_variant ORF1ab_pp1a G1850C 1.00e+0 AY.120.2
V1374 5767G>T missense_variant ORF1ab_pp1a A1923S 1.00e+0 AY.120.2
V139 103G>T missense_variant ORF1ab_pp1a V35L 1.00e+0 AY.120.2
V1439 6124G>T stop_gained ORF1ab_pp1a E2042* 1.00e+0 AY.120.2
V1458 6181G>T missense_variant ORF1ab_pp1a V2061F 1.00e+0 AY.120.2
V146 128G>T missense_variant ORF1ab_pp1a R43L 1.00e+0 AY.120.2
V1464 6208G>T stop_gained ORF1ab_pp1a E2070* 1.00e+0 AY.120.2
V1544 6476G>T missense_variant ORF1ab_pp1a R2159L 1.00e+0 AY.120.2
V1546 6488G>T missense_variant ORF1ab_pp1a R2163L 1.00e+0 AY.120.2
V1565 6619G>T missense_variant ORF1ab_pp1a G2207C 1.00e+0 AY.120.2
V1578 6742G>T missense_variant ORF1ab_pp1a A2248S 1.00e+0 AY.120.2
V162 178G>T missense_variant ORF1ab_pp1a V60F 1.00e+0 AY.120.2
V1644 7207G>T missense_variant ORF1ab_pp1a G2403C 1.00e+0 AY.120.2
V1649 7244G>T missense_variant ORF1ab_pp1a R2415L 1.00e+0 AY.120.2
V1651 7264G>T stop_gained ORF1ab_pp1a E2422* 1.00e+0 AY.120.2
V1662 7471G>T missense_variant ORF1ab_pp1a V2491F 1.00e+0 AY.120.2
V168 218G>T missense_variant ORF1ab_pp1a R73L 1.00e+0 AY.120.2
V1712 7783G>T missense_variant ORF1ab_pp1a V2595F 1.00e+0 AY.120.2
V1716 7810G>T missense_variant ORF1ab_pp1a V2604L 1.00e+0 AY.120.2
V1743 7913G>T missense_variant ORF1ab_pp1a R2638L 1.00e+0 AY.120.2
V175 230G>T missense_variant ORF1ab_pp1a R77L 1.00e+0 AY.120.2
V1753 8002G>T missense_variant ORF1ab_pp1a D2668Y 1.00e+0 AY.120.2
V1760 8057G>T missense_variant ORF1ab_pp1a R2686L 1.00e+0 AY.120.2
V1766 8090G>T missense_variant ORF1ab_pp1a R2697L 1.00e+0 AY.120.2
V1774 8143G>T missense_variant ORF1ab_pp1a V2715F 1.00e+0 AY.120.2
V1777 8177G>T missense_variant ORF1ab_pp1a R2726L 1.00e+0 AY.120.2
V1778 8189G>T missense_variant ORF1ab_pp1a R2730L 1.00e+0 AY.120.2
V1819 8453G>T missense_variant ORF1ab_pp1a R2818L 1.00e+0 AY.120.2
V1829 8522G>T missense_variant ORF1ab_pp1a R2841L 1.00e+0 AY.120.2
V1846 8596G>T missense_variant ORF1ab_pp1a V2866L 1.00e+0 AY.120.2
V1857 8624G>T missense_variant ORF1ab_pp1a R2875L 1.00e+0 AY.120.2
V1883 8846G>T missense_variant ORF1ab_pp1a R2949L 1.00e+0 AY.120.2
V1886 8858G>T missense_variant ORF1ab_pp1a R2953L 1.00e+0 AY.120.2
V1900 8959G>T missense_variant ORF1ab_pp1a G2987C 1.00e+0 AY.120.2
V1961 9491G>T missense_variant ORF1ab_pp1a R3164L 1.00e+0 AY.120.2
V1964 9581G>T missense_variant ORF1ab_pp1a R3194L 1.00e+0 AY.120.2
V1979 9703G>T missense_variant ORF1ab_pp1a A3235S 1.00e+0 AY.120.2
V1993 9874G>T missense_variant ORF1ab_pp1a G3292C 1.00e+0 AY.120.2
V1997 9892G>T missense_variant ORF1ab_pp1a V3298L 1.00e+0 AY.120.2
V2005 9968G>T missense_variant ORF1ab_pp1a R3323L 1.00e+0 AY.120.2
V2030 10103G>T missense_variant ORF1ab_pp1a R3368L 1.00e+0 AY.120.2
V2055 10417G>T missense_variant ORF1ab_pp1a A3473S 1.00e+0 AY.120.2
V2060 10454G>T missense_variant ORF1ab_pp1a R3485L 1.00e+0 AY.120.2
V207 277G>T stop_gained ORF1ab_pp1a E93* 1.00e+0 AY.120.2
V2079 10570G>T missense_variant ORF1ab_pp1a V3524F 1.00e+0 AY.120.2
V2087 10625G>T missense_variant ORF1ab_pp1a R3542L 1.00e+0 AY.120.2
V212 292G>T missense_variant ORF1ab_pp1a G98C 1.00e+0 AY.120.2
V215 296G>T missense_variant ORF1ab_pp1a R99L 1.00e+0 AY.120.2
V2151 10985G>T missense_variant ORF1ab_pp1a R3662L 1.00e+0 AY.120.2
V2188 11152G>T missense_variant ORF1ab_pp1a V3718F 1.00e+0 AY.120.2
V2238 11405G>T missense_variant ORF1ab_pp1a R3802L 1.00e+0 AY.120.2
V228 337G>T stop_gained ORF1ab_pp1a E113* 1.00e+0 AY.120.2
V2310 11978G>T missense_variant ORF1ab_pp1a R3993L 1.00e+0 AY.120.2
V2313 11996G>T missense_variant ORF1ab_pp1a R3999L 1.00e+0 AY.120.2
V2358 12449G>T missense_variant ORF1ab_pp1a R4150L 1.00e+0 AY.120.2
V2362 12469G>T missense_variant ORF1ab_pp1a G4157C 1.00e+0 AY.120.2
V2386 12559G>T missense_variant ORF1ab_pp1a D4187Y 1.00e+0 AY.120.2
V239 356G>T missense_variant ORF1ab_pp1a R119L 1.00e+0 AY.120.2
V2406 12752G>T missense_variant ORF1ab_pp1a R4251L 1.00e+0 AY.120.2
V2424 12992G>T missense_variant ORF1ab_pp1a R4331L 1.00e+0 AY.120.2
V243 371G>T missense_variant ORF1ab_pp1a R124L 1.00e+0 AY.120.2
V2438 13114G>T missense_variant ORF1ab_pp1a V4372F 1.00e+0 AY.120.2
V2439 13120G>T missense_variant ORF1ab_pp1a G4374C 1.00e+0 AY.120.2
V2445 13160G>T missense_variant ORF1ab_pp1a R4387L 1.00e+0 AY.120.2
V2446 13162G>T stop_gained ORF1ab_pp1a E4388* 1.00e+0 AY.120.2
V245 379G>T missense_variant ORF1ab_pp1a G127C 1.00e+0 AY.120.2
V2452 13204G>T missense_variant ORF1ab_pp1a G4402W 1.00e+0 AY.120.2
V2453 13213G>T missense_variant ORF1ab_pp1ab G4405C 1.00e+0 AY.120.2
V2456 13229G>T missense_variant ORF1ab_pp1ab R4410L 1.00e+0 AY.120.2
V2459 13243G>T missense_variant ORF1ab_pp1ab G4415C 1.00e+0 AY.120.2
V2463 13267G>T missense_variant ORF1ab_pp1ab V4423L 1.00e+0 AY.120.2
V2470 13340G>T missense_variant ORF1ab_pp1ab R4447L 1.00e+0 AY.120.2
V2496 13498G>T missense_variant ORF1ab_pp1ab G4500C 1.00e+0 AY.120.2
V2500 13523G>T missense_variant ORF1ab_pp1ab R4508L 1.00e+0 AY.120.2
V2503 13529G>T missense_variant ORF1ab_pp1ab R4510L 1.00e+0 AY.120.2
V2507 13558G>T missense_variant ORF1ab_pp1ab V4520F 1.00e+0 AY.120.2
V251 409G>T missense_variant ORF1ab_pp1a G137C 1.00e+0 AY.120.2
V2528 13694G>T missense_variant ORF1ab_pp1ab R4565L 1.00e+0 AY.120.2
V2529 13696G>T missense_variant ORF1ab_pp1ab V4566L 1.00e+0 AY.120.2
V2532 13702G>T missense_variant ORF1ab_pp1ab A4568S 1.00e+0 AY.120.2
V2535 13724G>T missense_variant ORF1ab_pp1ab R4575L 1.00e+0 AY.120.2
V2540 13766G>T missense_variant ORF1ab_pp1ab R4589L 1.00e+0 AY.120.2
V2543 13834G>T missense_variant ORF1ab_pp1ab G4612C 1.00e+0 AY.120.2
V255 412G>T missense_variant ORF1ab_pp1a A138S 1.00e+0 AY.120.2
V257 415G>T missense_variant ORF1ab_pp1a D139Y 1.00e+0 AY.120.2
V2584 14030G>T missense_variant ORF1ab_pp1ab R4677L 1.00e+0 AY.120.2
V2612 14320G>T missense_variant ORF1ab_pp1ab A4774S 1.00e+0 AY.120.2
V2615 14351G>T missense_variant ORF1ab_pp1ab R4784L 1.00e+0 AY.120.2
V2620 14413G>T missense_variant ORF1ab_pp1ab G4805C 1.00e+0 AY.120.2
V2631 14530G>T missense_variant ORF1ab_pp1ab D4844Y 1.00e+0 AY.120.2
V2632 14546G>T missense_variant ORF1ab_pp1ab R4849L 1.00e+0 AY.120.2
V2641 14659G>T missense_variant ORF1ab_pp1ab V4887F 1.00e+0 AY.120.2
V2652 14761G>T missense_variant ORF1ab_pp1ab A4921S 1.00e+0 AY.120.2
V2654 14774G>T missense_variant ORF1ab_pp1ab R4925L 1.00e+0 AY.120.2
V2656 14840G>T missense_variant ORF1ab_pp1ab R4947L 1.00e+0 AY.120.2
V2657 14845G>T missense_variant ORF1ab_pp1ab V4949L 1.00e+0 AY.120.2
V2680 15095G>T missense_variant ORF1ab_pp1ab R5032L 1.00e+0 AY.120.2
V2687 15128G>T missense_variant ORF1ab_pp1ab R5043L 1.00e+0 AY.120.2
V269 439G>T missense_variant ORF1ab_pp1a D147Y 1.00e+0 AY.120.2
V2694 15187G>A missense_variant ORF1ab_pp1ab G5063S -7.07e-1 AY.120.2
V270 442G>T stop_gained ORF1ab_pp1a E148* 1.00e+0 AY.120.2
V2702 15325G>T missense_variant ORF1ab_pp1ab D5109Y 1.00e+0 AY.120.2
V2706 15338G>T missense_variant ORF1ab_pp1ab R5113L 1.00e+0 AY.120.2
V2715 15415G>T missense_variant ORF1ab_pp1ab A5139S 1.00e+0 AY.120.2
V2716 15425G>T missense_variant ORF1ab_pp1ab R5142L 1.00e+0 AY.120.2
V2745 15718G>T missense_variant ORF1ab_pp1ab V5240L 1.00e+0 AY.120.2
V2746 15749G>T missense_variant ORF1ab_pp1ab R5250L 1.00e+0 AY.120.2
V2747 15754G>T missense_variant ORF1ab_pp1ab V5252L 1.00e+0 AY.120.2
V2772 16034G>T missense_variant ORF1ab_pp1ab R5345L 1.00e+0 AY.120.2
V2796 16273G>T missense_variant ORF1ab_pp1ab D5425Y 1.00e+0 AY.120.2
V2812 16436G>T missense_variant ORF1ab_pp1ab R5479L 1.00e+0 AY.120.2
V2822 16505G>T missense_variant ORF1ab_pp1ab R5502L 1.00e+0 AY.120.2
V2823 16529G>T missense_variant ORF1ab_pp1ab R5510L 1.00e+0 AY.120.2
V2834 16607G>T missense_variant ORF1ab_pp1ab R5536L 1.00e+0 AY.120.2
V285 512G>T missense_variant ORF1ab_pp1a R171L 1.00e+0 AY.120.2
V287 524G>T missense_variant ORF1ab_pp1a R175L 1.00e+0 AY.120.2
V2880 16880G>T missense_variant ORF1ab_pp1ab R5627L 1.00e+0 AY.120.2
V2884 16909G>T missense_variant ORF1ab_pp1ab A5637S 1.00e+0 AY.120.2
V289 535G>T stop_gained ORF1ab_pp1a G179* 1.00e+0 AY.120.2
V2894 16982G>T missense_variant ORF1ab_pp1ab R5661L 1.00e+0 AY.120.2
V2896 16988G>T missense_variant ORF1ab_pp1ab R5663L 1.00e+0 AY.120.2
V2919 17173G>T missense_variant ORF1ab_pp1ab D5725Y 1.00e+0 AY.120.2
V2923 17198G>T missense_variant ORF1ab_pp1ab R5733L 1.00e+0 AY.120.2
V2933 17287G>T stop_gained ORF1ab_pp1ab G5763* 1.00e+0 AY.120.2
V2935 17297G>T missense_variant ORF1ab_pp1ab R5766L 1.00e+0 AY.120.2
V2936 17300G>T missense_variant ORF1ab_pp1ab R5767L 1.00e+0 AY.120.2
V2956 17455G>T missense_variant ORF1ab_pp1ab V5819L 1.00e+0 AY.120.2
V2960 17477G>T missense_variant ORF1ab_pp1ab R5826L 1.00e+0 AY.120.2
V297 559G>T missense_variant ORF1ab_pp1a D187Y 1.00e+0 AY.120.2
V2992 17753G>T missense_variant ORF1ab_pp1ab R5918L 1.00e+0 AY.120.2
V3039 18002G>T missense_variant ORF1ab_pp1ab R6001L 1.00e+0 AY.120.2
V3040 18004G>T stop_gained ORF1ab_pp1ab E6002* 1.00e+0 AY.120.2
V3045 18026G>T missense_variant ORF1ab_pp1ab R6009L 1.00e+0 AY.120.2
V3048 18043G>T missense_variant ORF1ab_pp1ab D6015Y 1.00e+0 AY.120.2
V3049 18049G>T stop_gained ORF1ab_pp1ab E6017* 1.00e+0 AY.120.2
V3085 18263G>T missense_variant ORF1ab_pp1ab R6088L 1.00e+0 AY.120.2
V3092 18319G>T missense_variant ORF1ab_pp1ab V6107L 1.00e+0 AY.120.2
V3102 18389G>T missense_variant ORF1ab_pp1ab R6130L 1.00e+0 AY.120.2
V3105 18413G>T missense_variant ORF1ab_pp1ab R6138L 1.00e+0 AY.120.2
V311 620G>T missense_variant ORF1ab_pp1a R207L 1.00e+0 AY.120.2
V3115 18481G>T missense_variant ORF1ab_pp1ab V6161F 1.00e+0 AY.120.2
V3130 18625G>T stop_gained ORF1ab_pp1ab E6209* 1.00e+0 AY.120.2
V3135 18641G>T missense_variant ORF1ab_pp1ab R6214L 1.00e+0 AY.120.2
V3187 18943G>T missense_variant ORF1ab_pp1ab D6315Y 1.00e+0 AY.120.2
V321 649G>T stop_gained ORF1ab_pp1a E217* 1.00e+0 AY.120.2
V3216 19202G>T missense_variant ORF1ab_pp1ab R6401L 1.00e+0 AY.120.2
V3220 19261G>T missense_variant ORF1ab_pp1ab D6421Y 1.00e+0 AY.120.2
V3254 19538G>T missense_variant ORF1ab_pp1ab R6513L 1.00e+0 AY.120.2
V3293 19769G>T missense_variant ORF1ab_pp1ab R6590L 1.00e+0 AY.120.2
V3310 19870G>T missense_variant ORF1ab_pp1ab V6624L 7.07e-1 AY.120.2
V332 695G>T missense_variant ORF1ab_pp1a R232L 1.00e+0 AY.120.2
V3331 20027G>T missense_variant ORF1ab_pp1ab R6676L 1.00e+0 AY.120.2
V3334 20053G>T stop_gained ORF1ab_pp1ab E6685* 1.00e+0 AY.120.2
V3338 20062G>T missense_variant ORF1ab_pp1ab V6688F 1.00e+0 AY.120.2
V3345 20126G>T missense_variant ORF1ab_pp1ab R6709L 1.00e+0 AY.120.2
V336 731G>T missense_variant ORF1ab_pp1a R244L 1.00e+0 AY.120.2
V3415 20527G>T missense_variant ORF1ab_pp1ab A6843S 1.00e+0 AY.120.2
V3428 20683G>T missense_variant ORF1ab_pp1ab D6895Y 1.00e+0 AY.120.2
V3444 20791G>T missense_variant ORF1ab_pp1ab D6931Y 1.00e+0 AY.120.2
V3462 20893G>T missense_variant ORF1ab_pp1ab V6965L 1.00e+0 AY.120.2
V3475 20956G>T missense_variant ORF1ab_pp1ab A6986S 1.00e+0 AY.120.2
V3487 21041G>T missense_variant ORF1ab_pp1ab R7014L 1.00e+0 AY.120.2
V3488 21043G>T stop_gained ORF1ab_pp1ab E7015* 1.00e+0 AY.120.2
V3517 -5G>T upstream_gene_variant S None 1.00e+0 AY.120.2
V3621 367G>T missense_variant S A123S 1.00e+0 AY.120.2
V370 902G>T missense_variant ORF1ab_pp1a R301L 1.00e+0 AY.120.2
V3737 641G>T missense_variant S R214L 1.00e+0 AY.120.2
V3822 1030G>T missense_variant S A344S 1.00e+0 AY.120.2
V3857 1231G>T missense_variant S A411S 1.00e+0 AY.120.2
V3959 1730G>T missense_variant S R577L 1.00e+0 AY.120.2
V396 1003G>T missense_variant ORF1ab_pp1a D335Y 1.00e+0 AY.120.2
V3985 1901G>T missense_variant S R634L 1.00e+0 AY.120.2
V3991 1937G>T missense_variant S R646L 1.00e+0 AY.120.2
V4005 2014G>T missense_variant S A672S 1.00e+0 AY.120.2
V401 1024G>T stop_gained ORF1ab_pp1a E342* 1.00e+0 AY.120.2
V4024 2042C>T missense_variant S P681L 1.00e+0 AY.120.2
V4025 2045G>T missense_variant S R682L 1.00e+0 AY.120.2
V4026 2048G>T missense_variant S R683L 1.00e+0 AY.120.2
V4029 2054G>T missense_variant S R685L 1.00e+0 AY.120.2
V4065 2294G>T missense_variant S R765L 1.00e+0 AY.120.2
V4109 2569G>T missense_variant S G857C 1.00e+0 AY.120.2
V4150 2948G>T missense_variant S R983L 1.00e+0 AY.120.2
V4185 3272G>T missense_variant S R1091L 1.00e+0 AY.120.2
V4289 3778G>T missense_variant S D1260Y 1.00e+0 AY.120.2
V4345 89G>T missense_variant ORF3a R30L 1.00e+0 AY.120.2
V4347 91G>T missense_variant ORF3a A31S 1.00e+0 AY.120.2
V437 1156G>T stop_gained ORF1ab_pp1a E386* 1.00e+0 AY.120.2
V4379 130G>T stop_gained ORF3a G44* 1.00e+0 AY.120.2
V4391 148G>T missense_variant ORF3a V50F 1.00e+0 AY.120.2
V4459 289G>T missense_variant ORF3a V97F 1.00e+0 AY.120.2
V446 1193G>T missense_variant ORF1ab_pp1a R398L 1.00e+0 AY.120.2
V4502 383G>T missense_variant ORF3a W128L 7.07e-1 AY.120.2
V4512 401G>T missense_variant ORF3a R134L 1.00e+0 AY.120.2
V453 1205G>T missense_variant ORF1ab_pp1a R402L 1.00e+0 AY.120.2
V4614 751G>T missense_variant ORF3a G251C 1.00e+0 AY.120.2
V4620 760G>T stop_gained ORF3a G254* 1.00e+0 AY.120.2
V464 1277G>T missense_variant ORF1ab_pp1a R426L 1.00e+0 AY.120.2
V4652 817G>T missense_variant ORF3a V273L 1.00e+0 AY.120.2
V4672 70G>T missense_variant E V24L 1.00e+0 AY.120.2
V4678 145G>T missense_variant E V49L 1.00e+0 AY.120.2
V4685 172G>T missense_variant E V58F 7.07e-1 AY.120.2
V4686 182G>T missense_variant E R61L 1.00e+0 AY.120.2
V469 1285G>T missense_variant ORF1ab_pp1a A429S 1.00e+0 AY.120.2
V4722 16G>T missense_variant M G6C 1.00e+0 AY.120.2
V4760 245T>C missense_variant M I82T -1.00e+0 AY.120.2
V4772 320G>T missense_variant M R107L 1.00e+0 AY.120.2
V4782 473G>T missense_variant M R158L 7.07e-1 AY.120.2
V4784 521G>T missense_variant M R174L 1.00e+0 AY.120.2
V4788 593G>T missense_variant M R198L 1.00e+0 AY.120.2
V4800 13G>T missense_variant ORF6 V5F 1.00e+0 AY.120.2
V484 1330G>T stop_gained ORF1ab_pp1a E444* 1.00e+0 AY.120.2
V4844 -4G>T upstream_gene_variant ORF7a None 7.07e-1 AY.120.2
V4864 37G>T missense_variant ORF7a A13S 1.00e+0 AY.120.2
V4895 121G>T stop_gained ORF7a E41* 1.00e+0 AY.120.2
V4930 208G>T missense_variant ORF7a G70C 1.00e+0 AY.120.2
V4932 211G>T missense_variant ORF7a V71L 1.00e+0 AY.120.2
V4937 220G>T missense_variant ORF7a V74F 1.00e+0 AY.120.2
V4943 233G>T missense_variant ORF7a R78L 1.00e+0 AY.120.2
V5056 127G>T missense_variant ORF7b A43S 1.00e+0 AY.120.2
V5061 -4G>T upstream_gene_variant ORF8 None 1.00e+0 AY.120.2
V511 1420G>T missense_variant ORF1ab_pp1a A474S 1.00e+0 AY.120.2
V5144 184G>T missense_variant ORF8 V62L 1.00e+0 AY.120.2
V5173 223G>T missense_variant ORF8 D75Y 1.00e+0 AY.120.2
V5176 229G>T missense_variant ORF8 G77C 1.00e+0 AY.120.2
V5196 302G>T missense_variant ORF8 R101L 1.00e+0 AY.120.2
V5209 340G>T missense_variant ORF8 V114F 1.00e+0 AY.120.2
V5212 344G>T missense_variant ORF8 R115L 1.00e+0 AY.120.2
V5234 -12G>T upstream_gene_variant N None 1.00e+0 AY.120.2
V5266 29G>T missense_variant N R10L 1.00e+0 AY.120.2
V5277 41G>T missense_variant N R14L 1.00e+0 AY.120.2
V5324 107G>T missense_variant N R36L 1.00e+0 AY.120.2
V5331 119G>T missense_variant N R40L 1.00e+0 AY.120.2
V5333 122G>T missense_variant N R41L 1.00e+0 AY.120.2
V5345 203G>T missense_variant N R68L 1.00e+0 AY.120.2
V5349 214G>T missense_variant N V72F 1.00e+0 AY.120.2
V5355 263G>T missense_variant N R88L 1.00e+0 AY.120.2
V5359 278G>T missense_variant N R93L 1.00e+0 AY.120.2
V5361 284G>T missense_variant N R95L 1.00e+0 AY.120.2
V5364 295G>T missense_variant N G99C 1.00e+0 AY.120.2
V5379 385G>T missense_variant N G129C 1.00e+0 AY.120.2
V5395 446G>T missense_variant N R149L 1.00e+0 AY.120.2
V5404 472G>T missense_variant N V158L 1.00e+0 AY.120.2
V5414 517G>T missense_variant N A173S 1.00e+0 AY.120.2
V5419 535G>T missense_variant N G179C 1.00e+0 AY.120.2
V5429 554G>T missense_variant N R185L 1.00e+0 AY.120.2
V5434 566G>T missense_variant N R189L 1.00e+0 AY.120.2
V5437 572G>T missense_variant N R191L 1.00e+0 AY.120.2
V5536 776G>T missense_variant N R259L 1.00e+0 AY.120.2
V5537 785G>T missense_variant N R262L 1.00e+0 AY.120.2
V554 1625G>T missense_variant ORF1ab_pp1a R542L 1.00e+0 AY.120.2
V5546 823G>T missense_variant N G275C 1.00e+0 AY.120.2
V5547 830G>T missense_variant N R277L 1.00e+0 AY.120.2
V556 1634G>T missense_variant ORF1ab_pp1a R545L 1.00e+0 AY.120.2
V5565 931G>T missense_variant N A311S 1.00e+0 AY.120.2
V5566 946G>T stop_gained N G316* 1.00e+0 AY.120.2
V5570 956G>T missense_variant N R319L 1.00e+0 AY.120.2
V5594 1075G>T missense_variant N A359S 1.00e+0 AY.120.2
V563 1649G>T missense_variant ORF1ab_pp1a R550L 1.00e+0 AY.120.2
V5688 16G>T missense_variant ORF10 V6F 1.00e+0 AY.120.2
V5690 22G>T missense_variant ORF10 A8S 1.00e+0 AY.120.2
V5708 71G>T missense_variant ORF10 R24L 1.00e+0 AY.120.2
V574 1679G>T missense_variant ORF1ab_pp1a R560L 1.00e+0 AY.120.2
V5762 *4350G>T downstream_gene_variant S None 7.07e-1 AY.120.2
V5781 *4360G>T downstream_gene_variant S None 1.00e+0 AY.120.2
V5790 *4367G>T downstream_gene_variant S None 7.07e-1 AY.120.2
V5794 *4371G>T downstream_gene_variant S None 1.00e+0 AY.120.2
V581 1696G>T missense_variant ORF1ab_pp1a A566S 1.00e+0 AY.120.2
V5875 222G>T synonymous_variant ORF1ab_pp1a S74S 1.00e+0 AY.120.2
V5970 726G>T synonymous_variant ORF1ab_pp1a T242T 1.00e+0 AY.120.2
V5998 921G>T synonymous_variant ORF1ab_pp1a A307A 1.00e+0 AY.120.2
V6010 999G>T synonymous_variant ORF1ab_pp1a T333T 1.00e+0 AY.120.2
V61 -68G>T upstream_gene_variant ORF1ab_pp1a None 1.00e+0 AY.120.2
V6121 1830G>T synonymous_variant ORF1ab_pp1a S610S 1.00e+0 AY.120.2
V6165 2133G>T synonymous_variant ORF1ab_pp1a T711T 1.00e+0 AY.120.2
V6413 3942G>T synonymous_variant ORF1ab_pp1a A1314A 1.00e+0 AY.120.2
V6420 3990G>T synonymous_variant ORF1ab_pp1a P1330P 1.00e+0 AY.120.2
V643 1933G>T missense_variant ORF1ab_pp1a G645C 1.00e+0 AY.120.2
V6481 4455G>T synonymous_variant ORF1ab_pp1a A1485A 1.00e+0 AY.120.2
V6521 4743G>T synonymous_variant ORF1ab_pp1a T1581T 1.00e+0 AY.120.2
V657 1981G>T missense_variant ORF1ab_pp1a G661C 1.00e+0 AY.120.2
V6610 5364G>T synonymous_variant ORF1ab_pp1a T1788T 7.07e-1 AY.120.2
V6634 5592G>T synonymous_variant ORF1ab_pp1a T1864T 1.00e+0 AY.120.2
V6765 6585G>T synonymous_variant ORF1ab_pp1a P2195P 1.00e+0 AY.120.2
V6830 7128G>T synonymous_variant ORF1ab_pp1a P2376P 1.00e+0 AY.120.2
V6859 7410G>T synonymous_variant ORF1ab_pp1a A2470A 1.00e+0 AY.120.2
V6890 7671G>T synonymous_variant ORF1ab_pp1a A2557A 1.00e+0 AY.120.2
V69 -62G>T upstream_gene_variant ORF1ab_pp1a None 1.00e+0 AY.120.2
V6900 7752G>T synonymous_variant ORF1ab_pp1a A2584A 1.00e+0 AY.120.2
V6908 7791G>T synonymous_variant ORF1ab_pp1a T2597T 1.00e+0 AY.120.2
V6950 8088G>T synonymous_variant ORF1ab_pp1a A2696A 1.00e+0 AY.120.2
V6952 8103G>T synonymous_variant ORF1ab_pp1a A2701A 1.00e+0 AY.120.2
V7011 8586G>T synonymous_variant ORF1ab_pp1a V2862V 7.07e-1 AY.120.2
V7125 9537G>T synonymous_variant ORF1ab_pp1a A3179A 1.00e+0 AY.120.2
V7140 9606G>T synonymous_variant ORF1ab_pp1a T3202T 1.00e+0 AY.120.2
V72 -58G>T upstream_gene_variant ORF1ab_pp1a None 1.00e+0 AY.120.2
V7246 10377G>T synonymous_variant ORF1ab_pp1a T3459T 1.00e+0 AY.120.2
V747 2359G>T missense_variant ORF1ab_pp1a G787W 1.00e+0 AY.120.2
V7480 12249G>T synonymous_variant ORF1ab_pp1a T4083T 1.00e+0 AY.120.2
V7502 12504G>T synonymous_variant ORF1ab_pp1a A4168A 1.00e+0 AY.120.2
V752 2374G>T stop_gained ORF1ab_pp1a E792* 1.00e+0 AY.120.2
V7567 12975G>T synonymous_variant ORF1ab_pp1a S4325S 1.00e+0 AY.120.2
V7602 13194G>T synonymous_variant ORF1ab_pp1a S4398S 1.00e+0 AY.120.2
V762 2452G>T missense_variant ORF1ab_pp1a G818C 1.00e+0 AY.120.2
V7677 13854G>T synonymous_variant ORF1ab_pp1ab T4618T 1.00e+0 AY.120.2
V7699 14004G>T synonymous_variant ORF1ab_pp1ab T4668T 1.00e+0 AY.120.2
V7751 14358G>T synonymous_variant ORF1ab_pp1ab T4786T 1.00e+0 AY.120.2
V782 2593G>T missense_variant ORF1ab_pp1a G865C 1.00e+0 AY.120.2
V7846 15108G>T synonymous_variant ORF1ab_pp1ab T5036T 1.00e+0 AY.120.2
V7869 15279G>T synonymous_variant ORF1ab_pp1ab T5093T 7.07e-1 AY.120.2
V787 2614G>T missense_variant ORF1ab_pp1a A872S 1.00e+0 AY.120.2
V7951 15957G>T synonymous_variant ORF1ab_pp1ab P5319P 1.00e+0 AY.120.2
V7974 16113G>T synonymous_variant ORF1ab_pp1ab P5371P 1.00e+0 AY.120.2
V8011 16383G>T synonymous_variant ORF1ab_pp1ab T5461T 7.07e-1 AY.120.2
V81 -47G>T upstream_gene_variant ORF1ab_pp1a None 1.00e+0 AY.120.2
V8101 17070G>T synonymous_variant ORF1ab_pp1ab T5690T 1.00e+0 AY.120.2
V8145 17415G>T synonymous_variant ORF1ab_pp1ab T5805T 7.07e-1 AY.120.2
V8252 18198G>T synonymous_variant ORF1ab_pp1ab P6066P 1.00e+0 AY.120.2
V8296 18492G>T synonymous_variant ORF1ab_pp1ab P6164P 7.07e-1 AY.120.2
V8328 18696G>T synonymous_variant ORF1ab_pp1ab A6232A 1.00e+0 AY.120.2
V8388 19191G>T synonymous_variant ORF1ab_pp1ab T6397T 1.00e+0 AY.120.2
V8446 19698G>T synonymous_variant ORF1ab_pp1ab T6566T 1.00e+0 AY.120.2
V8502 20205G>T synonymous_variant ORF1ab_pp1ab A6735A 1.00e+0 AY.120.2
V8519 20406G>T synonymous_variant ORF1ab_pp1ab A6802A 1.00e+0 AY.120.2
V8521 20415G>T synonymous_variant ORF1ab_pp1ab P6805P 1.00e+0 AY.120.2
V8547 20667G>T synonymous_variant ORF1ab_pp1ab T6889T 1.00e+0 AY.120.2
V8549 20673G>T synonymous_variant ORF1ab_pp1ab T6891T 1.00e+0 AY.120.2
V8592 20991G>T synonymous_variant ORF1ab_pp1ab A6997A 1.00e+0 AY.120.2
V8678 336G>T synonymous_variant S S112S 1.00e+0 AY.120.2
V8698 489G>T synonymous_variant S A163A 1.00e+0 AY.120.2
V8711 624G>T synonymous_variant S T208T 1.00e+0 AY.120.2
V8721 663G>T synonymous_variant S S221S 1.00e+0 AY.120.2
V8749 906G>T synonymous_variant S T302T 1.00e+0 AY.120.2
V882 2977G>T missense_variant ORF1ab_pp1a G993C 1.00e+0 AY.120.2
V8973 2637G>T synonymous_variant S A879A 1.00e+0 AY.120.2
V9003 2883G>T synonymous_variant S T961T 1.00e+0 AY.120.2
V9151 102G>T synonymous_variant ORF3a T34T 1.00e+0 AY.120.2
V9154 108G>T synonymous_variant ORF3a P36P 1.00e+0 AY.120.2
V9253 801G>T synonymous_variant ORF3a P267P 1.00e+0 AY.120.2
V9254 804G>T synonymous_variant ORF3a T268T 1.00e+0 AY.120.2
V9256 807G>T synonymous_variant ORF3a T269T 1.00e+0 AY.120.2
V9262 18G>T synonymous_variant E S6S 7.07e-1 AY.120.2
V9274 108G>T synonymous_variant E A36A 1.00e+0 AY.120.2
V9330 312G>T synonymous_variant M A104A 1.00e+0 AY.120.2
V9332 318G>T synonymous_variant M T106T 1.00e+0 AY.120.2
V9351 396G>T synonymous_variant M P132P 1.00e+0 AY.120.2
V9376 525G>T synonymous_variant M T175T 1.00e+0 AY.120.2
V9381 552G>T synonymous_variant M S184S 1.00e+0 AY.120.2
V9480 315G>T synonymous_variant ORF7a A105A 1.00e+0 AY.120.2
V9523 108G>T synonymous_variant ORF8 P36P 7.07e-1 AY.120.2
V9550 309G>T synonymous_variant ORF8 S103S 1.00e+0 AY.120.2
V9568 48G>T synonymous_variant N T16T 1.00e+0 AY.120.2
V9582 105G>T synonymous_variant N A35A 1.00e+0 AY.120.2
V9596 150G>T synonymous_variant N A50A 1.00e+0 AY.120.2
V9744 906G>T synonymous_variant N P302P 1.00e+0 AY.120.2
V9753 939G>T synonymous_variant N A313A 1.00e+0 AY.120.2
V9764 981G>T synonymous_variant N S327S 1.00e+0 AY.120.2
V9766 987G>T synonymous_variant N T329T 1.00e+0 AY.120.2
V978 3319G>T stop_gained ORF1ab_pp1a G1107* 1.00e+0 AY.120.2
V9797 1149G>T synonymous_variant N P383P 1.00e+0 AY.120.2
V9825 36G>T synonymous_variant ORF10 T12T 1.00e+0 AY.120.2
V988 3355G>T missense_variant ORF1ab_pp1a G1119C 1.00e+0 AY.120.2
V1002 3424G>T stop_gained ORF1ab_pp1a E1142* 1.00e+0 AY.120
V1026 3509G>T missense_variant ORF1ab_pp1a R1170L 1.00e+0 AY.120
V103 -20G>T upstream_gene_variant ORF1ab_pp1a None 1.00e+0 AY.120
V1047 3610G>T missense_variant ORF1ab_pp1a A1204S 1.00e+0 AY.120
V11 -194G>T upstream_gene_variant ORF1ab_pp1a None 1.00e+0 AY.120
V111 -10G>T upstream_gene_variant ORF1ab_pp1a None 7.07e-1 AY.120
V1133 4127G>T missense_variant ORF1ab_pp1a R1376L 1.00e+0 AY.120
V1139 4157G>T missense_variant ORF1ab_pp1a R1386L 1.00e+0 AY.120
V1146 4211G>T missense_variant ORF1ab_pp1a R1404L 1.00e+0 AY.120
V1159 4318G>T missense_variant ORF1ab_pp1a D1440Y 1.00e+0 AY.120
V1164 4391G>T missense_variant ORF1ab_pp1a R1464L 1.00e+0 AY.120
V118 28G>T stop_gained ORF1ab_pp1a E10* 1.00e+0 AY.120
V120 40G>T missense_variant ORF1ab_pp1a V14F 1.00e+0 AY.120
V124 71G>T missense_variant ORF1ab_pp1a R24L 1.00e+0 AY.120
V125 73G>T missense_variant ORF1ab_pp1a D25Y 1.00e+0 AY.120
V1252 4883G>T missense_variant ORF1ab_pp1a R1628L 1.00e+0 AY.120
V126 76G>T missense_variant ORF1ab_pp1a V26L 1.00e+0 AY.120
V130 82G>T missense_variant ORF1ab_pp1a V28L 1.00e+0 AY.120
V132 86G>T missense_variant ORF1ab_pp1a R29L 1.00e+0 AY.120
V1345 5548G>T missense_variant ORF1ab_pp1a G1850C 1.00e+0 AY.120
V1374 5767G>T missense_variant ORF1ab_pp1a A1923S 1.00e+0 AY.120
V1409 6032G>T missense_variant ORF1ab_pp1a R2011L 1.00e+0 AY.120
V1432 6097G>T missense_variant ORF1ab_pp1a A2033S 1.00e+0 AY.120
V1439 6124G>T stop_gained ORF1ab_pp1a E2042* 1.00e+0 AY.120
V146 128G>T missense_variant ORF1ab_pp1a R43L 7.07e-1 AY.120
V1464 6208G>T stop_gained ORF1ab_pp1a E2070* 1.00e+0 AY.120
V1544 6476G>T missense_variant ORF1ab_pp1a R2159L 1.00e+0 AY.120
V1546 6488G>T missense_variant ORF1ab_pp1a R2163L 1.00e+0 AY.120
V1565 6619G>T missense_variant ORF1ab_pp1a G2207C 1.00e+0 AY.120
V1578 6742G>T missense_variant ORF1ab_pp1a A2248S 1.00e+0 AY.120
V162 178G>T missense_variant ORF1ab_pp1a V60F 1.00e+0 AY.120
V1644 7207G>T missense_variant ORF1ab_pp1a G2403C 1.00e+0 AY.120
V1649 7244G>T missense_variant ORF1ab_pp1a R2415L 1.00e+0 AY.120
V1651 7264G>T stop_gained ORF1ab_pp1a E2422* 1.00e+0 AY.120
V1662 7471G>T missense_variant ORF1ab_pp1a V2491F 1.00e+0 AY.120
V168 218G>T missense_variant ORF1ab_pp1a R73L 1.00e+0 AY.120
V1712 7783G>T missense_variant ORF1ab_pp1a V2595F 1.00e+0 AY.120
V1716 7810G>T missense_variant ORF1ab_pp1a V2604L 1.00e+0 AY.120
V1743 7913G>T missense_variant ORF1ab_pp1a R2638L 1.00e+0 AY.120
V175 230G>T missense_variant ORF1ab_pp1a R77L 1.00e+0 AY.120
V1753 8002G>T missense_variant ORF1ab_pp1a D2668Y 1.00e+0 AY.120
V1760 8057G>T missense_variant ORF1ab_pp1a R2686L 1.00e+0 AY.120
V1766 8090G>T missense_variant ORF1ab_pp1a R2697L 1.00e+0 AY.120
V1774 8143G>T missense_variant ORF1ab_pp1a V2715F 1.00e+0 AY.120
V1777 8177G>T missense_variant ORF1ab_pp1a R2726L 1.00e+0 AY.120
V1778 8189G>T missense_variant ORF1ab_pp1a R2730L 1.00e+0 AY.120
V1819 8453G>T missense_variant ORF1ab_pp1a R2818L 1.00e+0 AY.120
V1829 8522G>T missense_variant ORF1ab_pp1a R2841L 1.00e+0 AY.120
V1846 8596G>T missense_variant ORF1ab_pp1a V2866L 1.00e+0 AY.120
V1857 8624G>T missense_variant ORF1ab_pp1a R2875L 1.00e+0 AY.120
V1883 8846G>T missense_variant ORF1ab_pp1a R2949L 1.00e+0 AY.120
V1886 8858G>T missense_variant ORF1ab_pp1a R2953L 1.00e+0 AY.120
V1900 8959G>T missense_variant ORF1ab_pp1a G2987C 1.00e+0 AY.120
V1961 9491G>T missense_variant ORF1ab_pp1a R3164L 1.00e+0 AY.120
V1964 9581G>T missense_variant ORF1ab_pp1a R3194L 1.00e+0 AY.120
V1993 9874G>T missense_variant ORF1ab_pp1a G3292C 1.00e+0 AY.120
V1997 9892G>T missense_variant ORF1ab_pp1a V3298L 1.00e+0 AY.120
V2005 9968G>T missense_variant ORF1ab_pp1a R3323L 1.00e+0 AY.120
V2030 10103G>T missense_variant ORF1ab_pp1a R3368L 1.00e+0 AY.120
V2055 10417G>T missense_variant ORF1ab_pp1a A3473S 1.00e+0 AY.120
V2060 10454G>T missense_variant ORF1ab_pp1a R3485L 1.00e+0 AY.120
V207 277G>T stop_gained ORF1ab_pp1a E93* 1.00e+0 AY.120
V2079 10570G>T missense_variant ORF1ab_pp1a V3524F 1.00e+0 AY.120
V2087 10625G>T missense_variant ORF1ab_pp1a R3542L 1.00e+0 AY.120
V2151 10985G>T missense_variant ORF1ab_pp1a R3662L 1.00e+0 AY.120
V2238 11405G>T missense_variant ORF1ab_pp1a R3802L 1.00e+0 AY.120
V228 337G>T stop_gained ORF1ab_pp1a E113* 1.00e+0 AY.120
V2310 11978G>T missense_variant ORF1ab_pp1a R3993L 1.00e+0 AY.120
V2313 11996G>T missense_variant ORF1ab_pp1a R3999L 1.00e+0 AY.120
V2358 12449G>T missense_variant ORF1ab_pp1a R4150L 1.00e+0 AY.120
V2362 12469G>T missense_variant ORF1ab_pp1a G4157C 1.00e+0 AY.120
V2386 12559G>T missense_variant ORF1ab_pp1a D4187Y 1.00e+0 AY.120
V239 356G>T missense_variant ORF1ab_pp1a R119L 1.00e+0 AY.120
V2406 12752G>T missense_variant ORF1ab_pp1a R4251L 1.00e+0 AY.120
V2424 12992G>T missense_variant ORF1ab_pp1a R4331L 1.00e+0 AY.120
V2438 13114G>T missense_variant ORF1ab_pp1a V4372F 1.00e+0 AY.120
V2439 13120G>T missense_variant ORF1ab_pp1a G4374C 1.00e+0 AY.120
V2445 13160G>T missense_variant ORF1ab_pp1a R4387L 1.00e+0 AY.120
V2446 13162G>T stop_gained ORF1ab_pp1a E4388* 1.00e+0 AY.120
V245 379G>T missense_variant ORF1ab_pp1a G127C 1.00e+0 AY.120
V2452 13204G>T missense_variant ORF1ab_pp1a G4402W 1.00e+0 AY.120
V2453 13213G>T missense_variant ORF1ab_pp1ab G4405C 1.00e+0 AY.120
V2456 13229G>T missense_variant ORF1ab_pp1ab R4410L 1.00e+0 AY.120
V2459 13243G>T missense_variant ORF1ab_pp1ab G4415C 1.00e+0 AY.120
V2463 13267G>T missense_variant ORF1ab_pp1ab V4423L 1.00e+0 AY.120
V2470 13340G>T missense_variant ORF1ab_pp1ab R4447L 1.00e+0 AY.120
V2474 13357G>T stop_gained ORF1ab_pp1ab E4453* 1.00e+0 AY.120
V2496 13498G>T missense_variant ORF1ab_pp1ab G4500C 1.00e+0 AY.120
V2500 13523G>T missense_variant ORF1ab_pp1ab R4508L 1.00e+0 AY.120
V2503 13529G>T missense_variant ORF1ab_pp1ab R4510L 1.00e+0 AY.120
V2507 13558G>T missense_variant ORF1ab_pp1ab V4520F 1.00e+0 AY.120
V251 409G>T missense_variant ORF1ab_pp1a G137C 1.00e+0 AY.120
V2528 13694G>T missense_variant ORF1ab_pp1ab R4565L 7.07e-1 AY.120
V2529 13696G>T missense_variant ORF1ab_pp1ab V4566L 1.00e+0 AY.120
V2532 13702G>T missense_variant ORF1ab_pp1ab A4568S 1.00e+0 AY.120
V2535 13724G>T missense_variant ORF1ab_pp1ab R4575L 1.00e+0 AY.120
V2540 13766G>T missense_variant ORF1ab_pp1ab R4589L 1.00e+0 AY.120
V2543 13834G>T missense_variant ORF1ab_pp1ab G4612C 1.00e+0 AY.120
V255 412G>T missense_variant ORF1ab_pp1a A138S 1.00e+0 AY.120
V257 415G>T missense_variant ORF1ab_pp1a D139Y 7.07e-1 AY.120
V2584 14030G>T missense_variant ORF1ab_pp1ab R4677L 1.00e+0 AY.120
V2612 14320G>T missense_variant ORF1ab_pp1ab A4774S 1.00e+0 AY.120
V2615 14351G>T missense_variant ORF1ab_pp1ab R4784L 1.00e+0 AY.120
V2620 14413G>T missense_variant ORF1ab_pp1ab G4805C 1.00e+0 AY.120
V2631 14530G>T missense_variant ORF1ab_pp1ab D4844Y 1.00e+0 AY.120
V2632 14546G>T missense_variant ORF1ab_pp1ab R4849L 1.00e+0 AY.120
V2641 14659G>T missense_variant ORF1ab_pp1ab V4887F 1.00e+0 AY.120
V2654 14774G>T missense_variant ORF1ab_pp1ab R4925L 1.00e+0 AY.120
V2656 14840G>T missense_variant ORF1ab_pp1ab R4947L 1.00e+0 AY.120
V2657 14845G>T missense_variant ORF1ab_pp1ab V4949L 1.00e+0 AY.120
V2660 14917G>T missense_variant ORF1ab_pp1ab A4973S 1.00e+0 AY.120
V2680 15095G>T missense_variant ORF1ab_pp1ab R5032L 1.00e+0 AY.120
V2687 15128G>T missense_variant ORF1ab_pp1ab R5043L 7.07e-1 AY.120
V269 439G>T missense_variant ORF1ab_pp1a D147Y 1.00e+0 AY.120
V270 442G>T stop_gained ORF1ab_pp1a E148* 1.00e+0 AY.120
V2702 15325G>T missense_variant ORF1ab_pp1ab D5109Y 1.00e+0 AY.120
V2706 15338G>T missense_variant ORF1ab_pp1ab R5113L 1.00e+0 AY.120
V2715 15415G>T missense_variant ORF1ab_pp1ab A5139S 1.00e+0 AY.120
V2716 15425G>T missense_variant ORF1ab_pp1ab R5142L 1.00e+0 AY.120
V2719 15457G>T missense_variant ORF1ab_pp1ab D5153Y 1.00e+0 AY.120
V2743 15697G>T missense_variant ORF1ab_pp1ab G5233C 1.00e+0 AY.120
V2746 15749G>T missense_variant ORF1ab_pp1ab R5250L 1.00e+0 AY.120
V2747 15754G>T missense_variant ORF1ab_pp1ab V5252L 1.00e+0 AY.120
V2772 16034G>T missense_variant ORF1ab_pp1ab R5345L 1.00e+0 AY.120
V2796 16273G>T missense_variant ORF1ab_pp1ab D5425Y 1.00e+0 AY.120
V2812 16436G>T missense_variant ORF1ab_pp1ab R5479L 7.07e-1 AY.120
V2822 16505G>T missense_variant ORF1ab_pp1ab R5502L 1.00e+0 AY.120
V2823 16529G>T missense_variant ORF1ab_pp1ab R5510L 1.00e+0 AY.120
V2834 16607G>T missense_variant ORF1ab_pp1ab R5536L 1.00e+0 AY.120
V285 512G>T missense_variant ORF1ab_pp1a R171L 1.00e+0 AY.120
V2884 16909G>T missense_variant ORF1ab_pp1ab A5637S 1.00e+0 AY.120
V289 535G>T stop_gained ORF1ab_pp1a G179* 1.00e+0 AY.120
V2894 16982G>T missense_variant ORF1ab_pp1ab R5661L 1.00e+0 AY.120
V2896 16988G>T missense_variant ORF1ab_pp1ab R5663L 1.00e+0 AY.120
V29 -142G>T upstream_gene_variant ORF1ab_pp1a None 1.00e+0 AY.120
V2919 17173G>T missense_variant ORF1ab_pp1ab D5725Y 1.00e+0 AY.120
V2923 17198G>T missense_variant ORF1ab_pp1ab R5733L 1.00e+0 AY.120
V2933 17287G>T stop_gained ORF1ab_pp1ab G5763* 1.00e+0 AY.120
V2935 17297G>T missense_variant ORF1ab_pp1ab R5766L 1.00e+0 AY.120
V2936 17300G>T missense_variant ORF1ab_pp1ab R5767L 1.00e+0 AY.120
V2956 17455G>T missense_variant ORF1ab_pp1ab V5819L 1.00e+0 AY.120
V296 551G>T missense_variant ORF1ab_pp1a R184L 1.00e+0 AY.120
V2960 17477G>T missense_variant ORF1ab_pp1ab R5826L 1.00e+0 AY.120
V297 559G>T missense_variant ORF1ab_pp1a D187Y 1.00e+0 AY.120
V2992 17753G>T missense_variant ORF1ab_pp1ab R5918L 1.00e+0 AY.120
V3039 18002G>T missense_variant ORF1ab_pp1ab R6001L 7.07e-1 AY.120
V3040 18004G>T stop_gained ORF1ab_pp1ab E6002* 1.00e+0 AY.120
V3045 18026G>T missense_variant ORF1ab_pp1ab R6009L 1.00e+0 AY.120
V3048 18043G>T missense_variant ORF1ab_pp1ab D6015Y 1.00e+0 AY.120
V3049 18049G>T stop_gained ORF1ab_pp1ab E6017* 1.00e+0 AY.120
V3102 18389G>T missense_variant ORF1ab_pp1ab R6130L 1.00e+0 AY.120
V3105 18413G>T missense_variant ORF1ab_pp1ab R6138L 7.07e-1 AY.120
V311 620G>T missense_variant ORF1ab_pp1a R207L 1.00e+0 AY.120
V3115 18481G>T missense_variant ORF1ab_pp1ab V6161F 1.00e+0 AY.120
V3130 18625G>T stop_gained ORF1ab_pp1ab E6209* 1.00e+0 AY.120
V3135 18641G>T missense_variant ORF1ab_pp1ab R6214L 1.00e+0 AY.120
V321 649G>T stop_gained ORF1ab_pp1a E217* 1.00e+0 AY.120
V3254 19538G>T missense_variant ORF1ab_pp1ab R6513L 1.00e+0 AY.120
V3293 19769G>T missense_variant ORF1ab_pp1ab R6590L 1.00e+0 AY.120
V332 695G>T missense_variant ORF1ab_pp1a R232L 1.00e+0 AY.120
V3331 20027G>T missense_variant ORF1ab_pp1ab R6676L 1.00e+0 AY.120
V3334 20053G>T stop_gained ORF1ab_pp1ab E6685* 1.00e+0 AY.120
V3338 20062G>T missense_variant ORF1ab_pp1ab V6688F 1.00e+0 AY.120
V3345 20126G>T missense_variant ORF1ab_pp1ab R6709L 1.00e+0 AY.120
V336 731G>T missense_variant ORF1ab_pp1a R244L 1.00e+0 AY.120
V3415 20527G>T missense_variant ORF1ab_pp1ab A6843S 1.00e+0 AY.120
V3428 20683G>T missense_variant ORF1ab_pp1ab D6895Y 1.00e+0 AY.120
V3444 20791G>T missense_variant ORF1ab_pp1ab D6931Y 1.00e+0 AY.120
V3462 20893G>T missense_variant ORF1ab_pp1ab V6965L 1.00e+0 AY.120
V3475 20956G>T missense_variant ORF1ab_pp1ab A6986S 1.00e+0 AY.120
V3487 21041G>T missense_variant ORF1ab_pp1ab R7014L 7.07e-1 AY.120
V3488 21043G>T stop_gained ORF1ab_pp1ab E7015* 1.00e+0 AY.120
V3517 -5G>T upstream_gene_variant S None 1.00e+0 AY.120
V370 902G>T missense_variant ORF1ab_pp1a R301L 7.07e-1 AY.120
V38 -114G>T upstream_gene_variant ORF1ab_pp1a None 7.07e-1 AY.120
V3959 1730G>T missense_variant S R577L 1.00e+0 AY.120
V396 1003G>T missense_variant ORF1ab_pp1a D335Y 1.00e+0 AY.120
V3985 1901G>T missense_variant S R634L 1.00e+0 AY.120
V3991 1937G>T missense_variant S R646L 7.07e-1 AY.120
V4005 2014G>T missense_variant S A672S 1.00e+0 AY.120
V401 1024G>T stop_gained ORF1ab_pp1a E342* 1.00e+0 AY.120
V4024 2042C>T missense_variant S P681L 7.07e-1 AY.120
V4029 2054G>T missense_variant S R685L 1.00e+0 AY.120
V41 -101G>T upstream_gene_variant ORF1ab_pp1a None 1.00e+0 AY.120
V4109 2569G>T missense_variant S G857C 1.00e+0 AY.120
V4150 2948G>T missense_variant S R983L 1.00e+0 AY.120
V4185 3272G>T missense_variant S R1091L 7.07e-1 AY.120
V4235 3554G>T missense_variant S R1185L 7.07e-1 AY.120
V4244 3595G>T missense_variant S D1199Y 1.00e+0 AY.120
V4302 -6G>T upstream_gene_variant ORF3a None 1.00e+0 AY.120
V437 1156G>T stop_gained ORF1ab_pp1a E386* 1.00e+0 AY.120
V4379 130G>T stop_gained ORF3a G44* 1.00e+0 AY.120
V4391 148G>T missense_variant ORF3a V50F 1.00e+0 AY.120
V446 1193G>T missense_variant ORF1ab_pp1a R398L 1.00e+0 AY.120
V4614 751G>T missense_variant ORF3a G251C 1.00e+0 AY.120
V464 1277G>T missense_variant ORF1ab_pp1a R426L 1.00e+0 AY.120
V4672 70G>T missense_variant E V24L 7.07e-1 AY.120
V4686 182G>T missense_variant E R61L 1.00e+0 AY.120
V469 1285G>T missense_variant ORF1ab_pp1a A429S 1.00e+0 AY.120
V4722 16G>T missense_variant M G6C 1.00e+0 AY.120
V4763 247G>T missense_variant M A83S 1.00e+0 AY.120
V4772 320G>T missense_variant M R107L 1.00e+0 AY.120
V4784 521G>T missense_variant M R174L 1.00e+0 AY.120
V4788 593G>T missense_variant M R198L 1.00e+0 AY.120
V484 1330G>T stop_gained ORF1ab_pp1a E444* 1.00e+0 AY.120
V4864 37G>T missense_variant ORF7a A13S 1.00e+0 AY.120
V4895 121G>T stop_gained ORF7a E41* 1.00e+0 AY.120
V4937 220G>T missense_variant ORF7a V74F 1.00e+0 AY.120
V511 1420G>T missense_variant ORF1ab_pp1a A474S 1.00e+0 AY.120
V5173 223G>T missense_variant ORF8 D75Y 1.00e+0 AY.120
V5209 340G>T missense_variant ORF8 V114F 1.00e+0 AY.120
V5212 344G>T missense_variant ORF8 R115L 7.07e-1 AY.120
V5234 -12G>T upstream_gene_variant N None 1.00e+0 AY.120
V5266 29G>T missense_variant N R10L 1.00e+0 AY.120
V5277 41G>T missense_variant N R14L 7.07e-1 AY.120
V5324 107G>T missense_variant N R36L 1.00e+0 AY.120
V5345 203G>T missense_variant N R68L 1.00e+0 AY.120
V5349 214G>T missense_variant N V72F 1.00e+0 AY.120
V5355 263G>T missense_variant N R88L 1.00e+0 AY.120
V5359 278G>T missense_variant N R93L 1.00e+0 AY.120
V5361 284G>T missense_variant N R95L 7.07e-1 AY.120
V5364 295G>T missense_variant N G99C 1.00e+0 AY.120
V5379 385G>T missense_variant N G129C 1.00e+0 AY.120
V5395 446G>T missense_variant N R149L 1.00e+0 AY.120
V5404 472G>T missense_variant N V158L 1.00e+0 AY.120
V5414 517G>T missense_variant N A173S 7.07e-1 AY.120
V5419 535G>T missense_variant N G179C 7.07e-1 AY.120
V5429 554G>T missense_variant N R185L 1.00e+0 AY.120
V5434 566G>T missense_variant N R189L 1.00e+0 AY.120
V5437 572G>T missense_variant N R191L 1.00e+0 AY.120
V5536 776G>T missense_variant N R259L 1.00e+0 AY.120
V5537 785G>T missense_variant N R262L 1.00e+0 AY.120
V5546 823G>T missense_variant N G275C 1.00e+0 AY.120
V5547 830G>T missense_variant N R277L 1.00e+0 AY.120
V556 1634G>T missense_variant ORF1ab_pp1a R545L 1.00e+0 AY.120
V5565 931G>T missense_variant N A311S 7.07e-1 AY.120
V5566 946G>T stop_gained N G316* 1.00e+0 AY.120
V5570 956G>T missense_variant N R319L 1.00e+0 AY.120
V563 1649G>T missense_variant ORF1ab_pp1a R550L 1.00e+0 AY.120
V5688 16G>T missense_variant ORF10 V6F 1.00e+0 AY.120
V5690 22G>T missense_variant ORF10 A8S 1.00e+0 AY.120
V574 1679G>T missense_variant ORF1ab_pp1a R560L 1.00e+0 AY.120
V581 1696G>T missense_variant ORF1ab_pp1a A566S 1.00e+0 AY.120
V5970 726G>T synonymous_variant ORF1ab_pp1a T242T 1.00e+0 AY.120
V6010 999G>T synonymous_variant ORF1ab_pp1a T333T 7.07e-1 AY.120
V61 -68G>T upstream_gene_variant ORF1ab_pp1a None 7.07e-1 AY.120
V6121 1830G>T synonymous_variant ORF1ab_pp1a S610S 1.00e+0 AY.120
V6165 2133G>T synonymous_variant ORF1ab_pp1a T711T 1.00e+0 AY.120
V643 1933G>T missense_variant ORF1ab_pp1a G645C 1.00e+0 AY.120
V6481 4455G>T synonymous_variant ORF1ab_pp1a A1485A 1.00e+0 AY.120
V657 1981G>T missense_variant ORF1ab_pp1a G661C 7.07e-1 AY.120
V6634 5592G>T synonymous_variant ORF1ab_pp1a T1864T 1.00e+0 AY.120
V6686 6006G>T synonymous_variant ORF1ab_pp1a T2002T 1.00e+0 AY.120
V6704 6099G>T synonymous_variant ORF1ab_pp1a A2033A 7.07e-1 AY.120
V6765 6585G>T synonymous_variant ORF1ab_pp1a P2195P 1.00e+0 AY.120
V6908 7791G>T synonymous_variant ORF1ab_pp1a T2597T 1.00e+0 AY.120
V6950 8088G>T synonymous_variant ORF1ab_pp1a A2696A 7.07e-1 AY.120
V6952 8103G>T synonymous_variant ORF1ab_pp1a A2701A 7.07e-1 AY.120
V7140 9606G>T synonymous_variant ORF1ab_pp1a T3202T 1.00e+0 AY.120
V72 -58G>T upstream_gene_variant ORF1ab_pp1a None 1.00e+0 AY.120
V747 2359G>T missense_variant ORF1ab_pp1a G787W 1.00e+0 AY.120
V752 2374G>T stop_gained ORF1ab_pp1a E792* 1.00e+0 AY.120
V7604 13239G>T synonymous_variant ORF1ab_pp1ab P4413P 7.07e-1 AY.120
V762 2452G>T missense_variant ORF1ab_pp1a G818C 1.00e+0 AY.120
V7699 14004G>T synonymous_variant ORF1ab_pp1ab T4668T 7.07e-1 AY.120
V7751 14358G>T synonymous_variant ORF1ab_pp1ab T4786T 1.00e+0 AY.120
V787 2614G>T missense_variant ORF1ab_pp1a A872S 1.00e+0 AY.120
V8252 18198G>T synonymous_variant ORF1ab_pp1ab P6066P 1.00e+0 AY.120
V8328 18696G>T synonymous_variant ORF1ab_pp1ab A6232A 1.00e+0 AY.120
V8502 20205G>T synonymous_variant ORF1ab_pp1ab A6735A 1.00e+0 AY.120
V8519 20406G>T synonymous_variant ORF1ab_pp1ab A6802A 1.00e+0 AY.120
V8678 336G>T synonymous_variant S S112S 7.07e-1 AY.120
V8711 624G>T synonymous_variant S T208T 7.07e-1 AY.120
V9253 801G>T synonymous_variant ORF3a P267P 1.00e+0 AY.120
V9274 108G>T synonymous_variant E A36A 1.00e+0 AY.120
V9550 309G>T synonymous_variant ORF8 S103S 7.07e-1 AY.120
V9596 150G>T synonymous_variant N A50A 1.00e+0 AY.120
V978 3319G>T stop_gained ORF1ab_pp1a G1107* 1.00e+0 AY.120
V9825 36G>T synonymous_variant ORF10 T12T 1.00e+0 AY.120
V1002 3424G>T stop_gained ORF1ab_pp1a E1142* 1.00e+0 AY.127
V1026 3509G>T missense_variant ORF1ab_pp1a R1170L 1.00e+0 AY.127
V103 -20G>T upstream_gene_variant ORF1ab_pp1a None 1.00e+0 AY.127
V1047 3610G>T missense_variant ORF1ab_pp1a A1204S 9.43e-1 AY.127
V11 -194G>T upstream_gene_variant ORF1ab_pp1a None 8.82e-1 AY.127
V111 -10G>T upstream_gene_variant ORF1ab_pp1a None 9.49e-1 AY.127
V1133 4127G>T missense_variant ORF1ab_pp1a R1376L 1.00e+0 AY.127
V1139 4157G>T missense_variant ORF1ab_pp1a R1386L 1.00e+0 AY.127
V1146 4211G>T missense_variant ORF1ab_pp1a R1404L 1.00e+0 AY.127
V1159 4318G>T missense_variant ORF1ab_pp1a D1440Y 1.00e+0 AY.127
V1164 4391G>T missense_variant ORF1ab_pp1a R1464L 1.00e+0 AY.127
V118 28G>T stop_gained ORF1ab_pp1a E10* 1.00e+0 AY.127
V120 40G>T missense_variant ORF1ab_pp1a V14F 9.05e-1 AY.127
V124 71G>T missense_variant ORF1ab_pp1a R24L 1.00e+0 AY.127
V125 73G>T missense_variant ORF1ab_pp1a D25Y 9.43e-1 AY.127
V1252 4883G>T missense_variant ORF1ab_pp1a R1628L 9.49e-1 AY.127
V126 76G>T missense_variant ORF1ab_pp1a V26L 1.00e+0 AY.127
V1298 5248G>T missense_variant ORF1ab_pp1a V1750L 1.00e+0 AY.127
V130 82G>T missense_variant ORF1ab_pp1a V28L 1.00e+0 AY.127
V132 86G>T missense_variant ORF1ab_pp1a R29L 1.00e+0 AY.127
V1345 5548G>T missense_variant ORF1ab_pp1a G1850C 1.00e+0 AY.127
V1374 5767G>T missense_variant ORF1ab_pp1a A1923S 1.00e+0 AY.127
V139 103G>T missense_variant ORF1ab_pp1a V35L 1.00e+0 AY.127
V1409 6032G>T missense_variant ORF1ab_pp1a R2011L 9.43e-1 AY.127
V1432 6097G>T missense_variant ORF1ab_pp1a A2033S 9.43e-1 AY.127
V1439 6124G>T stop_gained ORF1ab_pp1a E2042* 1.00e+0 AY.127
V1458 6181G>T missense_variant ORF1ab_pp1a V2061F 8.32e-1 AY.127
V146 128G>T missense_variant ORF1ab_pp1a R43L 1.00e+0 AY.127
V1464 6208G>T stop_gained ORF1ab_pp1a E2070* 1.00e+0 AY.127
V1544 6476G>T missense_variant ORF1ab_pp1a R2159L 1.00e+0 AY.127
V1546 6488G>T missense_variant ORF1ab_pp1a R2163L 1.00e+0 AY.127
V1565 6619G>T missense_variant ORF1ab_pp1a G2207C 1.00e+0 AY.127
V1578 6742G>T missense_variant ORF1ab_pp1a A2248S 9.49e-1 AY.127
V162 178G>T missense_variant ORF1ab_pp1a V60F 9.49e-1 AY.127
V1644 7207G>T missense_variant ORF1ab_pp1a G2403C 1.00e+0 AY.127
V1649 7244G>T missense_variant ORF1ab_pp1a R2415L 1.00e+0 AY.127
V1651 7264G>T stop_gained ORF1ab_pp1a E2422* 1.00e+0 AY.127
V1662 7471G>T missense_variant ORF1ab_pp1a V2491F 1.00e+0 AY.127
V168 218G>T missense_variant ORF1ab_pp1a R73L 1.00e+0 AY.127
V1712 7783G>T missense_variant ORF1ab_pp1a V2595F 1.00e+0 AY.127
V1716 7810G>T missense_variant ORF1ab_pp1a V2604L 1.00e+0 AY.127
V1743 7913G>T missense_variant ORF1ab_pp1a R2638L 1.00e+0 AY.127
V175 230G>T missense_variant ORF1ab_pp1a R77L 1.00e+0 AY.127
V1753 8002G>T missense_variant ORF1ab_pp1a D2668Y 1.00e+0 AY.127
V1760 8057G>T missense_variant ORF1ab_pp1a R2686L 1.00e+0 AY.127
V1766 8090G>T missense_variant ORF1ab_pp1a R2697L 1.00e+0 AY.127
V1774 8143G>T missense_variant ORF1ab_pp1a V2715F 1.00e+0 AY.127
V1777 8177G>T missense_variant ORF1ab_pp1a R2726L 9.05e-1 AY.127
V1778 8189G>T missense_variant ORF1ab_pp1a R2730L 1.00e+0 AY.127
V1819 8453G>T missense_variant ORF1ab_pp1a R2818L 1.00e+0 AY.127
V1829 8522G>T missense_variant ORF1ab_pp1a R2841L 1.00e+0 AY.127
V1846 8596G>T missense_variant ORF1ab_pp1a V2866L 1.00e+0 AY.127
V1857 8624G>T missense_variant ORF1ab_pp1a R2875L 1.00e+0 AY.127
V1883 8846G>T missense_variant ORF1ab_pp1a R2949L 1.00e+0 AY.127
V1886 8858G>T missense_variant ORF1ab_pp1a R2953L 1.00e+0 AY.127
V1900 8959G>T missense_variant ORF1ab_pp1a G2987C 1.00e+0 AY.127
V1961 9491G>T missense_variant ORF1ab_pp1a R3164L 1.00e+0 AY.127
V1964 9581G>T missense_variant ORF1ab_pp1a R3194L 1.00e+0 AY.127
V1979 9703G>T missense_variant ORF1ab_pp1a A3235S 9.49e-1 AY.127
V1993 9874G>T missense_variant ORF1ab_pp1a G3292C 1.00e+0 AY.127
V1997 9892G>T missense_variant ORF1ab_pp1a V3298L 1.00e+0 AY.127
V2005 9968G>T missense_variant ORF1ab_pp1a R3323L 1.00e+0 AY.127
V2030 10103G>T missense_variant ORF1ab_pp1a R3368L 1.00e+0 AY.127
V2055 10417G>T missense_variant ORF1ab_pp1a A3473S 1.00e+0 AY.127
V2060 10454G>T missense_variant ORF1ab_pp1a R3485L 1.00e+0 AY.127
V207 277G>T stop_gained ORF1ab_pp1a E93* 1.00e+0 AY.127
V2079 10570G>T missense_variant ORF1ab_pp1a V3524F 1.00e+0 AY.127
V2087 10625G>T missense_variant ORF1ab_pp1a R3542L 1.00e+0 AY.127
V21 -165G>T upstream_gene_variant ORF1ab_pp1a None 8.43e-1 AY.127
V212 292G>T missense_variant ORF1ab_pp1a G98C 1.00e+0 AY.127
V215 296G>T missense_variant ORF1ab_pp1a R99L 9.49e-1 AY.127
V2151 10985G>T missense_variant ORF1ab_pp1a R3662L 1.00e+0 AY.127
V2238 11405G>T missense_variant ORF1ab_pp1a R3802L 1.00e+0 AY.127
V228 337G>T stop_gained ORF1ab_pp1a E113* 1.00e+0 AY.127
V2310 11978G>T missense_variant ORF1ab_pp1a R3993L 1.00e+0 AY.127
V2313 11996G>T missense_variant ORF1ab_pp1a R3999L 1.00e+0 AY.127
V2358 12449G>T missense_variant ORF1ab_pp1a R4150L 1.00e+0 AY.127
V2362 12469G>T missense_variant ORF1ab_pp1a G4157C 1.00e+0 AY.127
V2386 12559G>T missense_variant ORF1ab_pp1a D4187Y 1.00e+0 AY.127
V239 356G>T missense_variant ORF1ab_pp1a R119L 9.49e-1 AY.127
V2406 12752G>T missense_variant ORF1ab_pp1a R4251L 1.00e+0 AY.127
V2424 12992G>T missense_variant ORF1ab_pp1a R4331L 1.00e+0 AY.127
V243 371G>T missense_variant ORF1ab_pp1a R124L 1.00e+0 AY.127
V2438 13114G>T missense_variant ORF1ab_pp1a V4372F 1.00e+0 AY.127
V2439 13120G>T missense_variant ORF1ab_pp1a G4374C 8.66e-1 AY.127
V2445 13160G>T missense_variant ORF1ab_pp1a R4387L 1.00e+0 AY.127
V2446 13162G>T stop_gained ORF1ab_pp1a E4388* 1.00e+0 AY.127
V245 379G>T missense_variant ORF1ab_pp1a G127C 1.00e+0 AY.127
V2452 13204G>T missense_variant ORF1ab_pp1a G4402W 1.00e+0 AY.127
V2453 13213G>T missense_variant ORF1ab_pp1ab G4405C 1.00e+0 AY.127
V2456 13229G>T missense_variant ORF1ab_pp1ab R4410L 1.00e+0 AY.127
V2459 13243G>T missense_variant ORF1ab_pp1ab G4415C 1.00e+0 AY.127
V2463 13267G>T missense_variant ORF1ab_pp1ab V4423L 1.00e+0 AY.127
V2470 13340G>T missense_variant ORF1ab_pp1ab R4447L 1.00e+0 AY.127
V2474 13357G>T stop_gained ORF1ab_pp1ab E4453* 8.82e-1 AY.127
V2496 13498G>T missense_variant ORF1ab_pp1ab G4500C 9.05e-1 AY.127
V2500 13523G>T missense_variant ORF1ab_pp1ab R4508L 1.00e+0 AY.127
V2503 13529G>T missense_variant ORF1ab_pp1ab R4510L 1.00e+0 AY.127
V2507 13558G>T missense_variant ORF1ab_pp1ab V4520F 1.00e+0 AY.127
V251 409G>T missense_variant ORF1ab_pp1a G137C 9.05e-1 AY.127
V2528 13694G>T missense_variant ORF1ab_pp1ab R4565L 1.00e+0 AY.127
V2529 13696G>T missense_variant ORF1ab_pp1ab V4566L 1.00e+0 AY.127
V2532 13702G>T missense_variant ORF1ab_pp1ab A4568S 1.00e+0 AY.127
V2534 13718G>T missense_variant ORF1ab_pp1ab R4573L 1.00e+0 AY.127
V2535 13724G>T missense_variant ORF1ab_pp1ab R4575L 1.00e+0 AY.127
V2540 13766G>T missense_variant ORF1ab_pp1ab R4589L 1.00e+0 AY.127
V2543 13834G>T missense_variant ORF1ab_pp1ab G4612C 1.00e+0 AY.127
V255 412G>T missense_variant ORF1ab_pp1a A138S 9.49e-1 AY.127
V257 415G>T missense_variant ORF1ab_pp1a D139Y 1.00e+0 AY.127
V2584 14030G>T missense_variant ORF1ab_pp1ab R4677L 1.00e+0 AY.127
V2612 14320G>T missense_variant ORF1ab_pp1ab A4774S 1.00e+0 AY.127
V2615 14351G>T missense_variant ORF1ab_pp1ab R4784L 1.00e+0 AY.127
V2620 14413G>T missense_variant ORF1ab_pp1ab G4805C 1.00e+0 AY.127
V2631 14530G>T missense_variant ORF1ab_pp1ab D4844Y 1.00e+0 AY.127
V2632 14546G>T missense_variant ORF1ab_pp1ab R4849L 1.00e+0 AY.127
V2641 14659G>T missense_variant ORF1ab_pp1ab V4887F 1.00e+0 AY.127
V2652 14761G>T missense_variant ORF1ab_pp1ab A4921S 1.00e+0 AY.127
V2654 14774G>T missense_variant ORF1ab_pp1ab R4925L 1.00e+0 AY.127
V2656 14840G>T missense_variant ORF1ab_pp1ab R4947L 1.00e+0 AY.127
V2657 14845G>T missense_variant ORF1ab_pp1ab V4949L 1.00e+0 AY.127
V2660 14917G>T missense_variant ORF1ab_pp1ab A4973S 8.82e-1 AY.127
V2680 15095G>T missense_variant ORF1ab_pp1ab R5032L 1.00e+0 AY.127
V2687 15128G>T missense_variant ORF1ab_pp1ab R5043L 1.00e+0 AY.127
V269 439G>T missense_variant ORF1ab_pp1a D147Y 1.00e+0 AY.127
V270 442G>T stop_gained ORF1ab_pp1a E148* 1.00e+0 AY.127
V2702 15325G>T missense_variant ORF1ab_pp1ab D5109Y 1.00e+0 AY.127
V2706 15338G>T missense_variant ORF1ab_pp1ab R5113L 1.00e+0 AY.127
V2716 15425G>T missense_variant ORF1ab_pp1ab R5142L 1.00e+0 AY.127
V2719 15457G>T missense_variant ORF1ab_pp1ab D5153Y 8.82e-1 AY.127
V2743 15697G>T missense_variant ORF1ab_pp1ab G5233C 8.82e-1 AY.127
V2745 15718G>T missense_variant ORF1ab_pp1ab V5240L 6.71e-1 AY.127
V2746 15749G>T missense_variant ORF1ab_pp1ab R5250L 1.00e+0 AY.127
V2747 15754G>T missense_variant ORF1ab_pp1ab V5252L 1.00e+0 AY.127
V2772 16034G>T missense_variant ORF1ab_pp1ab R5345L 1.00e+0 AY.127
V2796 16273G>T missense_variant ORF1ab_pp1ab D5425Y 1.00e+0 AY.127
V2812 16436G>T missense_variant ORF1ab_pp1ab R5479L 1.00e+0 AY.127
V2822 16505G>T missense_variant ORF1ab_pp1ab R5502L 1.00e+0 AY.127
V2823 16529G>T missense_variant ORF1ab_pp1ab R5510L 1.00e+0 AY.127
V2834 16607G>T missense_variant ORF1ab_pp1ab R5536L 1.00e+0 AY.127
V285 512G>T missense_variant ORF1ab_pp1a R171L 1.00e+0 AY.127
V287 524G>T missense_variant ORF1ab_pp1a R175L 1.00e+0 AY.127
V2880 16880G>T missense_variant ORF1ab_pp1ab R5627L 1.00e+0 AY.127
V2884 16909G>T missense_variant ORF1ab_pp1ab A5637S 1.00e+0 AY.127
V289 535G>T stop_gained ORF1ab_pp1a G179* 1.00e+0 AY.127
V2894 16982G>T missense_variant ORF1ab_pp1ab R5661L 1.00e+0 AY.127
V2896 16988G>T missense_variant ORF1ab_pp1ab R5663L 1.00e+0 AY.127
V29 -142G>T upstream_gene_variant ORF1ab_pp1a None 9.43e-1 AY.127
V2919 17173G>T missense_variant ORF1ab_pp1ab D5725Y 1.00e+0 AY.127
V2923 17198G>T missense_variant ORF1ab_pp1ab R5733L 1.00e+0 AY.127
V2933 17287G>T stop_gained ORF1ab_pp1ab G5763* 1.00e+0 AY.127
V2935 17297G>T missense_variant ORF1ab_pp1ab R5766L 1.00e+0 AY.127
V2936 17300G>T missense_variant ORF1ab_pp1ab R5767L 1.00e+0 AY.127
V2956 17455G>T missense_variant ORF1ab_pp1ab V5819L 1.00e+0 AY.127
V296 551G>T missense_variant ORF1ab_pp1a R184L 1.00e+0 AY.127
V2960 17477G>T missense_variant ORF1ab_pp1ab R5826L 1.00e+0 AY.127
V297 559G>T missense_variant ORF1ab_pp1a D187Y 1.00e+0 AY.127
V2992 17753G>T missense_variant ORF1ab_pp1ab R5918L 1.00e+0 AY.127
V3039 18002G>T missense_variant ORF1ab_pp1ab R6001L 9.05e-1 AY.127
V3040 18004G>T stop_gained ORF1ab_pp1ab E6002* 1.00e+0 AY.127
V3045 18026G>T missense_variant ORF1ab_pp1ab R6009L 1.00e+0 AY.127
V3048 18043G>T missense_variant ORF1ab_pp1ab D6015Y 1.00e+0 AY.127
V3049 18049G>T stop_gained ORF1ab_pp1ab E6017* 1.00e+0 AY.127
V3085 18263G>T missense_variant ORF1ab_pp1ab R6088L 1.00e+0 AY.127
V3092 18319G>T missense_variant ORF1ab_pp1ab V6107L 8.02e-1 AY.127
V3102 18389G>T missense_variant ORF1ab_pp1ab R6130L 1.00e+0 AY.127
V3105 18413G>T missense_variant ORF1ab_pp1ab R6138L 8.32e-1 AY.127
V311 620G>T missense_variant ORF1ab_pp1a R207L 9.49e-1 AY.127
V3115 18481G>T missense_variant ORF1ab_pp1ab V6161F 9.43e-1 AY.127
V3130 18625G>T stop_gained ORF1ab_pp1ab E6209* 1.00e+0 AY.127
V3135 18641G>T missense_variant ORF1ab_pp1ab R6214L 1.00e+0 AY.127
V3187 18943G>T missense_variant ORF1ab_pp1ab D6315Y 9.49e-1 AY.127
V321 649G>T stop_gained ORF1ab_pp1a E217* 1.00e+0 AY.127
V3254 19538G>T missense_variant ORF1ab_pp1ab R6513L 1.00e+0 AY.127
V3293 19769G>T missense_variant ORF1ab_pp1ab R6590L 1.00e+0 AY.127
V3310 19870G>T missense_variant ORF1ab_pp1ab V6624L 7.07e-1 AY.127
V332 695G>T missense_variant ORF1ab_pp1a R232L 1.00e+0 AY.127
V3331 20027G>T missense_variant ORF1ab_pp1ab R6676L 1.00e+0 AY.127
V3334 20053G>T stop_gained ORF1ab_pp1ab E6685* 1.00e+0 AY.127
V3338 20062G>T missense_variant ORF1ab_pp1ab V6688F 9.49e-1 AY.127
V3345 20126G>T missense_variant ORF1ab_pp1ab R6709L 9.05e-1 AY.127
V336 731G>T missense_variant ORF1ab_pp1a R244L 1.00e+0 AY.127
V3415 20527G>T missense_variant ORF1ab_pp1ab A6843S 1.00e+0 AY.127
V3428 20683G>T missense_variant ORF1ab_pp1ab D6895Y 1.00e+0 AY.127
V3444 20791G>T missense_variant ORF1ab_pp1ab D6931Y 1.00e+0 AY.127
V3462 20893G>T missense_variant ORF1ab_pp1ab V6965L 9.49e-1 AY.127
V3487 21041G>T missense_variant ORF1ab_pp1ab R7014L 9.43e-1 AY.127
V3488 21043G>T stop_gained ORF1ab_pp1ab E7015* 1.00e+0 AY.127
V3517 -5G>T upstream_gene_variant S None 1.00e+0 AY.127
V3562 101G>T missense_variant S R34L 1.00e+0 AY.127
V3621 367G>T missense_variant S A123S 7.07e-1 AY.127
V370 902G>T missense_variant ORF1ab_pp1a R301L 1.00e+0 AY.127
V38 -114G>T upstream_gene_variant ORF1ab_pp1a None 1.00e+0 AY.127
V3822 1030G>T missense_variant S A344S 7.27e-1 AY.127
V3857 1231G>T missense_variant S A411S 8.02e-1 AY.127
V3959 1730G>T missense_variant S R577L 1.00e+0 AY.127
V396 1003G>T missense_variant ORF1ab_pp1a D335Y 1.00e+0 AY.127
V3991 1937G>T missense_variant S R646L 1.00e+0 AY.127
V4005 2014G>T missense_variant S A672S 1.00e+0 AY.127
V401 1024G>T stop_gained ORF1ab_pp1a E342* 1.00e+0 AY.127
V4024 2042C>T missense_variant S P681L 9.05e-1 AY.127
V4025 2045G>T missense_variant S R682L 1.00e+0 AY.127
V4026 2048G>T missense_variant S R683L 8.32e-1 AY.127
V4029 2054G>T missense_variant S R685L 1.00e+0 AY.127
V4065 2294G>T missense_variant S R765L 8.43e-1 AY.127
V41 -101G>T upstream_gene_variant ORF1ab_pp1a None 1.00e+0 AY.127
V4109 2569G>T missense_variant S G857C 1.00e+0 AY.127
V4150 2948G>T missense_variant S R983L 1.00e+0 AY.127
V4185 3272G>T missense_variant S R1091L 7.50e-1 AY.127
V4235 3554G>T missense_variant S R1185L 1.00e+0 AY.127
V4244 3595G>T missense_variant S D1199Y 9.49e-1 AY.127
V4289 3778G>T missense_variant S D1260Y 8.02e-1 AY.127
V4302 -6G>T upstream_gene_variant ORF3a None 8.82e-1 AY.127
V4345 89G>T missense_variant ORF3a R30L 7.07e-1 AY.127
V4347 91G>T missense_variant ORF3a A31S 8.02e-1 AY.127
V437 1156G>T stop_gained ORF1ab_pp1a E386* 1.00e+0 AY.127
V4379 130G>T stop_gained ORF3a G44* 1.00e+0 AY.127
V4391 148G>T missense_variant ORF3a V50F 1.00e+0 AY.127
V4410 175G>T missense_variant ORF3a A59S 6.73e-1 AY.127
V4459 289G>T missense_variant ORF3a V97F 6.25e-1 AY.127
V446 1193G>T missense_variant ORF1ab_pp1a R398L 9.49e-1 AY.127
V4512 401G>T missense_variant ORF3a R134L 6.67e-1 AY.127
V453 1205G>T missense_variant ORF1ab_pp1a R402L 1.00e+0 AY.127
V4614 751G>T missense_variant ORF3a G251C 1.00e+0 AY.127
V4620 760G>T stop_gained ORF3a G254* 9.05e-1 AY.127
V464 1277G>T missense_variant ORF1ab_pp1a R426L 9.49e-1 AY.127
V4652 817G>T missense_variant ORF3a V273L 6.88e-1 AY.127
V4672 70G>T missense_variant E V24L 9.49e-1 AY.127
V4678 145G>T missense_variant E V49L 9.05e-1 AY.127
V4685 172G>T missense_variant E V58F 7.50e-1 AY.127
V4686 182G>T missense_variant E R61L 8.66e-1 AY.127
V469 1285G>T missense_variant ORF1ab_pp1a A429S 9.05e-1 AY.127
V4722 16G>T missense_variant M G6C 9.49e-1 AY.127
V4757 232G>T missense_variant M G78C 8.89e-1 AY.127
V4763 247G>T missense_variant M A83S 8.25e-1 AY.127
V4772 320G>T missense_variant M R107L 1.00e+0 AY.127
V4782 473G>T missense_variant M R158L 1.00e+0 AY.127
V4784 521G>T missense_variant M R174L 1.00e+0 AY.127
V4788 593G>T missense_variant M R198L 1.00e+0 AY.127
V48 -92G>T upstream_gene_variant ORF1ab_pp1a None 6.39e-1 AY.127
V484 1330G>T stop_gained ORF1ab_pp1a E444* 9.43e-1 AY.127
V4864 37G>T missense_variant ORF7a A13S 1.00e+0 AY.127
V4930 208G>T missense_variant ORF7a G70C 6.23e-1 AY.127
V4932 211G>T missense_variant ORF7a V71L 7.78e-1 AY.127
V4937 220G>T missense_variant ORF7a V74F 8.82e-1 AY.127
V4943 233G>T missense_variant ORF7a R78L 7.03e-1 AY.127
V5056 127G>T missense_variant ORF7b A43S 1.00e+0 AY.127
V5061 -4G>T upstream_gene_variant ORF8 None 1.00e+0 AY.127
V511 1420G>T missense_variant ORF1ab_pp1a A474S 9.49e-1 AY.127
V5173 223G>T missense_variant ORF8 D75Y 9.49e-1 AY.127
V5176 229G>T missense_variant ORF8 G77C 8.66e-1 AY.127
V5196 302G>T missense_variant ORF8 R101L 9.49e-1 AY.127
V5209 340G>T missense_variant ORF8 V114F 9.43e-1 AY.127
V5212 344G>T missense_variant ORF8 R115L 6.88e-1 AY.127
V5234 -12G>T upstream_gene_variant N None 9.43e-1 AY.127
V5266 29G>T missense_variant N R10L 9.43e-1 AY.127
V5277 41G>T missense_variant N R14L 6.12e-1 AY.127
V5324 107G>T missense_variant N R36L 9.43e-1 AY.127
V5331 119G>T missense_variant N R40L 9.43e-1 AY.127
V5333 122G>T missense_variant N R41L 8.32e-1 AY.127
V5345 203G>T missense_variant N R68L 1.00e+0 AY.127
V5349 214G>T missense_variant N V72F 9.49e-1 AY.127
V5355 263G>T missense_variant N R88L 1.00e+0 AY.127
V5359 278G>T missense_variant N R93L 1.00e+0 AY.127
V5361 284G>T missense_variant N R95L 1.00e+0 AY.127
V5364 295G>T missense_variant N G99C 1.00e+0 AY.127
V5379 385G>T missense_variant N G129C 1.00e+0 AY.127
V5395 446G>T missense_variant N R149L 1.00e+0 AY.127
V5404 472G>T missense_variant N V158L 9.05e-1 AY.127
V5414 517G>T missense_variant N A173S 1.00e+0 AY.127
V5419 535G>T missense_variant N G179C 1.00e+0 AY.127
V5429 554G>T missense_variant N R185L 9.49e-1 AY.127
V5434 566G>T missense_variant N R189L 1.00e+0 AY.127
V5437 572G>T missense_variant N R191L 8.66e-1 AY.127
V5536 776G>T missense_variant N R259L 1.00e+0 AY.127
V5537 785G>T missense_variant N R262L 9.49e-1 AY.127
V554 1625G>T missense_variant ORF1ab_pp1a R542L 8.32e-1 AY.127
V5546 823G>T missense_variant N G275C 1.00e+0 AY.127
V5547 830G>T missense_variant N R277L 1.00e+0 AY.127
V556 1634G>T missense_variant ORF1ab_pp1a R545L 1.00e+0 AY.127
V5565 931G>T missense_variant N A311S 9.05e-1 AY.127
V5566 946G>T stop_gained N G316* 1.00e+0 AY.127
V5570 956G>T missense_variant N R319L 1.00e+0 AY.127
V5594 1075G>T missense_variant N A359S 7.27e-1 AY.127
V563 1649G>T missense_variant ORF1ab_pp1a R550L 1.00e+0 AY.127
V5688 16G>T missense_variant ORF10 V6F 1.00e+0 AY.127
V5690 22G>T missense_variant ORF10 A8S 1.00e+0 AY.127
V5708 71G>T missense_variant ORF10 R24L 7.07e-1 AY.127
V574 1679G>T missense_variant ORF1ab_pp1a R560L 1.00e+0 AY.127
V5781 *4360G>T downstream_gene_variant S None 6.80e-1 AY.127
V581 1696G>T missense_variant ORF1ab_pp1a A566S 1.00e+0 AY.127
V5875 222G>T synonymous_variant ORF1ab_pp1a S74S 7.75e-1 AY.127
V5998 921G>T synonymous_variant ORF1ab_pp1a A307A 7.75e-1 AY.127
V6010 999G>T synonymous_variant ORF1ab_pp1a T333T 8.66e-1 AY.127
V61 -68G>T upstream_gene_variant ORF1ab_pp1a None 9.49e-1 AY.127
V6121 1830G>T synonymous_variant ORF1ab_pp1a S610S 1.00e+0 AY.127
V6165 2133G>T synonymous_variant ORF1ab_pp1a T711T 6.12e-1 AY.127
V631 1879G>T missense_variant ORF1ab_pp1a V627F 8.32e-1 AY.127
V6420 3990G>T synonymous_variant ORF1ab_pp1a P1330P 8.02e-1 AY.127
V643 1933G>T missense_variant ORF1ab_pp1a G645C 1.00e+0 AY.127
V6521 4743G>T synonymous_variant ORF1ab_pp1a T1581T 6.12e-1 AY.127
V657 1981G>T missense_variant ORF1ab_pp1a G661C 1.00e+0 AY.127
V6610 5364G>T synonymous_variant ORF1ab_pp1a T1788T 7.27e-1 AY.127
V6634 5592G>T synonymous_variant ORF1ab_pp1a T1864T 7.75e-1 AY.127
V6686 6006G>T synonymous_variant ORF1ab_pp1a T2002T 1.00e+0 AY.127
V6695 6072G>T synonymous_variant ORF1ab_pp1a S2024S 7.03e-1 AY.127
V6704 6099G>T synonymous_variant ORF1ab_pp1a A2033A 9.43e-1 AY.127
V6765 6585G>T synonymous_variant ORF1ab_pp1a P2195P 9.05e-1 AY.127
V6830 7128G>T synonymous_variant ORF1ab_pp1a P2376P 8.66e-1 AY.127
V6890 7671G>T synonymous_variant ORF1ab_pp1a A2557A 6.71e-1 AY.127
V69 -62G>T upstream_gene_variant ORF1ab_pp1a None 7.50e-1 AY.127
V6908 7791G>T synonymous_variant ORF1ab_pp1a T2597T 9.49e-1 AY.127
V6950 8088G>T synonymous_variant ORF1ab_pp1a A2696A 9.49e-1 AY.127
V6952 8103G>T synonymous_variant ORF1ab_pp1a A2701A 1.00e+0 AY.127
V7140 9606G>T synonymous_variant ORF1ab_pp1a T3202T 1.00e+0 AY.127
V72 -58G>T upstream_gene_variant ORF1ab_pp1a None 8.66e-1 AY.127
V747 2359G>T missense_variant ORF1ab_pp1a G787W 1.00e+0 AY.127
V7480 12249G>T synonymous_variant ORF1ab_pp1a T4083T 8.02e-1 AY.127
V7502 12504G>T synonymous_variant ORF1ab_pp1a A4168A 8.02e-1 AY.127
V752 2374G>T stop_gained ORF1ab_pp1a E792* 1.00e+0 AY.127
V7567 12975G>T synonymous_variant ORF1ab_pp1a S4325S 1.00e+0 AY.127
V7604 13239G>T synonymous_variant ORF1ab_pp1ab P4413P 1.00e+0 AY.127
V762 2452G>T missense_variant ORF1ab_pp1a G818C 1.00e+0 AY.127
V7677 13854G>T synonymous_variant ORF1ab_pp1ab T4618T 6.88e-1 AY.127
V7699 14004G>T synonymous_variant ORF1ab_pp1ab T4668T 1.00e+0 AY.127
V7751 14358G>T synonymous_variant ORF1ab_pp1ab T4786T 9.49e-1 AY.127
V782 2593G>T missense_variant ORF1ab_pp1a G865C 1.00e+0 AY.127
V7869 15279G>T synonymous_variant ORF1ab_pp1ab T5093T 7.27e-1 AY.127
V787 2614G>T missense_variant ORF1ab_pp1a A872S 9.49e-1 AY.127
V7951 15957G>T synonymous_variant ORF1ab_pp1ab P5319P 1.00e+0 AY.127
V8011 16383G>T synonymous_variant ORF1ab_pp1ab T5461T 8.02e-1 AY.127
V81 -47G>T upstream_gene_variant ORF1ab_pp1a None 7.07e-1 AY.127
V8101 17070G>T synonymous_variant ORF1ab_pp1ab T5690T 9.05e-1 AY.127
V8145 17415G>T synonymous_variant ORF1ab_pp1ab T5805T 7.27e-1 AY.127
V8252 18198G>T synonymous_variant ORF1ab_pp1ab P6066P 1.00e+0 AY.127
V8328 18696G>T synonymous_variant ORF1ab_pp1ab A6232A 1.00e+0 AY.127
V8502 20205G>T synonymous_variant ORF1ab_pp1ab A6735A 1.00e+0 AY.127
V8519 20406G>T synonymous_variant ORF1ab_pp1ab A6802A 1.00e+0 AY.127
V8549 20673G>T synonymous_variant ORF1ab_pp1ab T6891T 1.00e+0 AY.127
V8678 336G>T synonymous_variant S S112S 8.16e-1 AY.127
V8698 489G>T synonymous_variant S A163A 7.78e-1 AY.127
V8711 624G>T synonymous_variant S T208T 8.89e-1 AY.127
V882 2977G>T missense_variant ORF1ab_pp1a G993C 8.02e-1 AY.127
V8973 2637G>T synonymous_variant S A879A 6.25e-1 AY.127
V9003 2883G>T synonymous_variant S T961T 9.49e-1 AY.127
V9151 102G>T synonymous_variant ORF3a T34T 1.00e+0 AY.127
V9154 108G>T synonymous_variant ORF3a P36P 1.00e+0 AY.127
V9253 801G>T synonymous_variant ORF3a P267P 1.00e+0 AY.127
V9256 807G>T synonymous_variant ORF3a T269T 6.71e-1 AY.127
V9262 18G>T synonymous_variant E S6S 1.00e+0 AY.127
V9274 108G>T synonymous_variant E A36A 1.00e+0 AY.127
V9330 312G>T synonymous_variant M A104A 8.66e-1 AY.127
V9332 318G>T synonymous_variant M T106T 8.66e-1 AY.127
V9351 396G>T synonymous_variant M P132P 6.55e-1 AY.127
V9376 525G>T synonymous_variant M T175T 1.00e+0 AY.127
V9381 552G>T synonymous_variant M S184S 8.66e-1 AY.127
V9480 315G>T synonymous_variant ORF7a A105A 9.43e-1 AY.127
V9550 309G>T synonymous_variant ORF8 S103S 1.00e+0 AY.127
V9568 48G>T synonymous_variant N T16T 6.28e-1 AY.127
V9596 150G>T synonymous_variant N A50A 9.05e-1 AY.127
V9744 906G>T synonymous_variant N P302P 6.12e-1 AY.127
V978 3319G>T stop_gained ORF1ab_pp1a G1107* 1.00e+0 AY.127
V9824 30G>T synonymous_variant ORF10 P10P 8.82e-1 AY.127
V9825 36G>T synonymous_variant ORF10 T12T 8.32e-1 AY.127
V988 3355G>T missense_variant ORF1ab_pp1a G1119C 1.00e+0 AY.127
V1002 3424G>T stop_gained ORF1ab_pp1a E1142* 1.00e+0 B.1.1.306
V1026 3509G>T missense_variant ORF1ab_pp1a R1170L 1.00e+0 B.1.1.306
V103 -20G>T upstream_gene_variant ORF1ab_pp1a None 1.00e+0 B.1.1.306
V1047 3610G>T missense_variant ORF1ab_pp1a A1204S 1.00e+0 B.1.1.306
V11 -194G>T upstream_gene_variant ORF1ab_pp1a None 1.00e+0 B.1.1.306
V111 -10G>T upstream_gene_variant ORF1ab_pp1a None 1.00e+0 B.1.1.306
V1133 4127G>T missense_variant ORF1ab_pp1a R1376L 1.00e+0 B.1.1.306
V1139 4157G>T missense_variant ORF1ab_pp1a R1386L 1.00e+0 B.1.1.306
V1146 4211G>T missense_variant ORF1ab_pp1a R1404L 1.00e+0 B.1.1.306
V1159 4318G>T missense_variant ORF1ab_pp1a D1440Y 1.00e+0 B.1.1.306
V1164 4391G>T missense_variant ORF1ab_pp1a R1464L 7.07e-1 B.1.1.306
V118 28G>T stop_gained ORF1ab_pp1a E10* 1.00e+0 B.1.1.306
V120 40G>T missense_variant ORF1ab_pp1a V14F 1.00e+0 B.1.1.306
V124 71G>T missense_variant ORF1ab_pp1a R24L 1.00e+0 B.1.1.306
V125 73G>T missense_variant ORF1ab_pp1a D25Y 1.00e+0 B.1.1.306
V1252 4883G>T missense_variant ORF1ab_pp1a R1628L 1.00e+0 B.1.1.306
V126 76G>T missense_variant ORF1ab_pp1a V26L 1.00e+0 B.1.1.306
V130 82G>T missense_variant ORF1ab_pp1a V28L 1.00e+0 B.1.1.306
V132 86G>T missense_variant ORF1ab_pp1a R29L 1.00e+0 B.1.1.306
V1345 5548G>T missense_variant ORF1ab_pp1a G1850C 1.00e+0 B.1.1.306
V1374 5767G>T missense_variant ORF1ab_pp1a A1923S 7.07e-1 B.1.1.306
V139 103G>T missense_variant ORF1ab_pp1a V35L 7.07e-1 B.1.1.306
V1409 6032G>T missense_variant ORF1ab_pp1a R2011L 1.00e+0 B.1.1.306
V1432 6097G>T missense_variant ORF1ab_pp1a A2033S 1.00e+0 B.1.1.306
V1439 6124G>T stop_gained ORF1ab_pp1a E2042* 1.00e+0 B.1.1.306
V1458 6181G>T missense_variant ORF1ab_pp1a V2061F 1.00e+0 B.1.1.306
V146 128G>T missense_variant ORF1ab_pp1a R43L 1.00e+0 B.1.1.306
V1464 6208G>T stop_gained ORF1ab_pp1a E2070* 1.00e+0 B.1.1.306
V1544 6476G>T missense_variant ORF1ab_pp1a R2159L 1.00e+0 B.1.1.306
V1546 6488G>T missense_variant ORF1ab_pp1a R2163L 1.00e+0 B.1.1.306
V1565 6619G>T missense_variant ORF1ab_pp1a G2207C 1.00e+0 B.1.1.306
V1578 6742G>T missense_variant ORF1ab_pp1a A2248S 1.00e+0 B.1.1.306
V162 178G>T missense_variant ORF1ab_pp1a V60F 1.00e+0 B.1.1.306
V1644 7207G>T missense_variant ORF1ab_pp1a G2403C 1.00e+0 B.1.1.306
V1649 7244G>T missense_variant ORF1ab_pp1a R2415L 1.00e+0 B.1.1.306
V1651 7264G>T stop_gained ORF1ab_pp1a E2422* 1.00e+0 B.1.1.306
V1662 7471G>T missense_variant ORF1ab_pp1a V2491F 1.00e+0 B.1.1.306
V168 218G>T missense_variant ORF1ab_pp1a R73L 1.00e+0 B.1.1.306
V1712 7783G>T missense_variant ORF1ab_pp1a V2595F 1.00e+0 B.1.1.306
V1716 7810G>T missense_variant ORF1ab_pp1a V2604L 1.00e+0 B.1.1.306
V1743 7913G>T missense_variant ORF1ab_pp1a R2638L 1.00e+0 B.1.1.306
V175 230G>T missense_variant ORF1ab_pp1a R77L 1.00e+0 B.1.1.306
V1753 8002G>T missense_variant ORF1ab_pp1a D2668Y 1.00e+0 B.1.1.306
V1760 8057G>T missense_variant ORF1ab_pp1a R2686L 1.00e+0 B.1.1.306
V1766 8090G>T missense_variant ORF1ab_pp1a R2697L 1.00e+0 B.1.1.306
V1774 8143G>T missense_variant ORF1ab_pp1a V2715F 1.00e+0 B.1.1.306
V1777 8177G>T missense_variant ORF1ab_pp1a R2726L 1.00e+0 B.1.1.306
V1778 8189G>T missense_variant ORF1ab_pp1a R2730L 1.00e+0 B.1.1.306
V1819 8453G>T missense_variant ORF1ab_pp1a R2818L 1.00e+0 B.1.1.306
V1829 8522G>T missense_variant ORF1ab_pp1a R2841L 1.00e+0 B.1.1.306
V1846 8596G>T missense_variant ORF1ab_pp1a V2866L 1.00e+0 B.1.1.306
V1857 8624G>T missense_variant ORF1ab_pp1a R2875L 1.00e+0 B.1.1.306
V1883 8846G>T missense_variant ORF1ab_pp1a R2949L 1.00e+0 B.1.1.306
V1886 8858G>T missense_variant ORF1ab_pp1a R2953L 1.00e+0 B.1.1.306
V1900 8959G>T missense_variant ORF1ab_pp1a G2987C 1.00e+0 B.1.1.306
V1961 9491G>T missense_variant ORF1ab_pp1a R3164L 7.07e-1 B.1.1.306
V1964 9581G>T missense_variant ORF1ab_pp1a R3194L 1.00e+0 B.1.1.306
V1979 9703G>T missense_variant ORF1ab_pp1a A3235S 1.00e+0 B.1.1.306
V1993 9874G>T missense_variant ORF1ab_pp1a G3292C 1.00e+0 B.1.1.306
V1997 9892G>T missense_variant ORF1ab_pp1a V3298L 7.07e-1 B.1.1.306
V2005 9968G>T missense_variant ORF1ab_pp1a R3323L 1.00e+0 B.1.1.306
V2030 10103G>T missense_variant ORF1ab_pp1a R3368L 1.00e+0 B.1.1.306
V2055 10417G>T missense_variant ORF1ab_pp1a A3473S 1.00e+0 B.1.1.306
V2060 10454G>T missense_variant ORF1ab_pp1a R3485L 1.00e+0 B.1.1.306
V207 277G>T stop_gained ORF1ab_pp1a E93* 1.00e+0 B.1.1.306
V2079 10570G>T missense_variant ORF1ab_pp1a V3524F 1.00e+0 B.1.1.306
V2087 10625G>T missense_variant ORF1ab_pp1a R3542L 1.00e+0 B.1.1.306
V21 -165G>T upstream_gene_variant ORF1ab_pp1a None 1.00e+0 B.1.1.306
V212 292G>T missense_variant ORF1ab_pp1a G98C 1.00e+0 B.1.1.306
V215 296G>T missense_variant ORF1ab_pp1a R99L 1.00e+0 B.1.1.306
V2151 10985G>T missense_variant ORF1ab_pp1a R3662L 1.00e+0 B.1.1.306
V2238 11405G>T missense_variant ORF1ab_pp1a R3802L 1.00e+0 B.1.1.306
V228 337G>T stop_gained ORF1ab_pp1a E113* 1.00e+0 B.1.1.306
V2310 11978G>T missense_variant ORF1ab_pp1a R3993L 1.00e+0 B.1.1.306
V2313 11996G>T missense_variant ORF1ab_pp1a R3999L 1.00e+0 B.1.1.306
V2358 12449G>T missense_variant ORF1ab_pp1a R4150L 1.00e+0 B.1.1.306
V2362 12469G>T missense_variant ORF1ab_pp1a G4157C 1.00e+0 B.1.1.306
V2386 12559G>T missense_variant ORF1ab_pp1a D4187Y 1.00e+0 B.1.1.306
V239 356G>T missense_variant ORF1ab_pp1a R119L 1.00e+0 B.1.1.306
V2406 12752G>T missense_variant ORF1ab_pp1a R4251L 1.00e+0 B.1.1.306
V2424 12992G>T missense_variant ORF1ab_pp1a R4331L 1.00e+0 B.1.1.306
V243 371G>T missense_variant ORF1ab_pp1a R124L 1.00e+0 B.1.1.306
V2438 13114G>T missense_variant ORF1ab_pp1a V4372F 1.00e+0 B.1.1.306
V2439 13120G>T missense_variant ORF1ab_pp1a G4374C 1.00e+0 B.1.1.306
V2445 13160G>T missense_variant ORF1ab_pp1a R4387L 1.00e+0 B.1.1.306
V2446 13162G>T stop_gained ORF1ab_pp1a E4388* 1.00e+0 B.1.1.306
V245 379G>T missense_variant ORF1ab_pp1a G127C 1.00e+0 B.1.1.306
V2452 13204G>T missense_variant ORF1ab_pp1a G4402W 1.00e+0 B.1.1.306
V2453 13213G>T missense_variant ORF1ab_pp1ab G4405C 1.00e+0 B.1.1.306
V2456 13229G>T missense_variant ORF1ab_pp1ab R4410L 1.00e+0 B.1.1.306
V2459 13243G>T missense_variant ORF1ab_pp1ab G4415C 1.00e+0 B.1.1.306
V2463 13267G>T missense_variant ORF1ab_pp1ab V4423L 1.00e+0 B.1.1.306
V2470 13340G>T missense_variant ORF1ab_pp1ab R4447L 1.00e+0 B.1.1.306
V2496 13498G>T missense_variant ORF1ab_pp1ab G4500C 1.00e+0 B.1.1.306
V2500 13523G>T missense_variant ORF1ab_pp1ab R4508L 1.00e+0 B.1.1.306
V2503 13529G>T missense_variant ORF1ab_pp1ab R4510L 1.00e+0 B.1.1.306
V2507 13558G>T missense_variant ORF1ab_pp1ab V4520F 1.00e+0 B.1.1.306
V251 409G>T missense_variant ORF1ab_pp1a G137C 1.00e+0 B.1.1.306
V2528 13694G>T missense_variant ORF1ab_pp1ab R4565L 1.00e+0 B.1.1.306
V2529 13696G>T missense_variant ORF1ab_pp1ab V4566L 1.00e+0 B.1.1.306
V2532 13702G>T missense_variant ORF1ab_pp1ab A4568S 1.00e+0 B.1.1.306
V2534 13718G>T missense_variant ORF1ab_pp1ab R4573L 1.00e+0 B.1.1.306
V2535 13724G>T missense_variant ORF1ab_pp1ab R4575L 1.00e+0 B.1.1.306
V2540 13766G>T missense_variant ORF1ab_pp1ab R4589L 1.00e+0 B.1.1.306
V2543 13834G>T missense_variant ORF1ab_pp1ab G4612C 1.00e+0 B.1.1.306
V255 412G>T missense_variant ORF1ab_pp1a A138S 1.00e+0 B.1.1.306
V257 415G>T missense_variant ORF1ab_pp1a D139Y 1.00e+0 B.1.1.306
V2584 14030G>T missense_variant ORF1ab_pp1ab R4677L 1.00e+0 B.1.1.306
V2612 14320G>T missense_variant ORF1ab_pp1ab A4774S 1.00e+0 B.1.1.306
V2615 14351G>T missense_variant ORF1ab_pp1ab R4784L 1.00e+0 B.1.1.306
V2620 14413G>T missense_variant ORF1ab_pp1ab G4805C 1.00e+0 B.1.1.306
V2631 14530G>T missense_variant ORF1ab_pp1ab D4844Y 1.00e+0 B.1.1.306
V2632 14546G>T missense_variant ORF1ab_pp1ab R4849L 1.00e+0 B.1.1.306
V2641 14659G>T missense_variant ORF1ab_pp1ab V4887F 1.00e+0 B.1.1.306
V2654 14774G>T missense_variant ORF1ab_pp1ab R4925L 1.00e+0 B.1.1.306
V2656 14840G>T missense_variant ORF1ab_pp1ab R4947L 1.00e+0 B.1.1.306
V2657 14845G>T missense_variant ORF1ab_pp1ab V4949L 1.00e+0 B.1.1.306
V2680 15095G>T missense_variant ORF1ab_pp1ab R5032L 1.00e+0 B.1.1.306
V2687 15128G>T missense_variant ORF1ab_pp1ab R5043L 1.00e+0 B.1.1.306
V269 439G>T missense_variant ORF1ab_pp1a D147Y 1.00e+0 B.1.1.306
V2695 15187G>T missense_variant ORF1ab_pp1ab G5063C 1.00e+0 B.1.1.306
V270 442G>T stop_gained ORF1ab_pp1a E148* 1.00e+0 B.1.1.306
V2702 15325G>T missense_variant ORF1ab_pp1ab D5109Y 1.00e+0 B.1.1.306
V2706 15338G>T missense_variant ORF1ab_pp1ab R5113L 1.00e+0 B.1.1.306
V2715 15415G>T missense_variant ORF1ab_pp1ab A5139S 1.00e+0 B.1.1.306
V2716 15425G>T missense_variant ORF1ab_pp1ab R5142L 1.00e+0 B.1.1.306
V2746 15749G>T missense_variant ORF1ab_pp1ab R5250L 1.00e+0 B.1.1.306
V2747 15754G>T missense_variant ORF1ab_pp1ab V5252L 1.00e+0 B.1.1.306
V2772 16034G>T missense_variant ORF1ab_pp1ab R5345L 1.00e+0 B.1.1.306
V2796 16273G>T missense_variant ORF1ab_pp1ab D5425Y 1.00e+0 B.1.1.306
V2812 16436G>T missense_variant ORF1ab_pp1ab R5479L 7.07e-1 B.1.1.306
V2822 16505G>T missense_variant ORF1ab_pp1ab R5502L 1.00e+0 B.1.1.306
V2823 16529G>T missense_variant ORF1ab_pp1ab R5510L 1.00e+0 B.1.1.306
V285 512G>T missense_variant ORF1ab_pp1a R171L 1.00e+0 B.1.1.306
V287 524G>T missense_variant ORF1ab_pp1a R175L 1.00e+0 B.1.1.306
V2880 16880G>T missense_variant ORF1ab_pp1ab R5627L 1.00e+0 B.1.1.306
V2884 16909G>T missense_variant ORF1ab_pp1ab A5637S 1.00e+0 B.1.1.306
V289 535G>T stop_gained ORF1ab_pp1a G179* 1.00e+0 B.1.1.306
V2894 16982G>T missense_variant ORF1ab_pp1ab R5661L 1.00e+0 B.1.1.306
V2896 16988G>T missense_variant ORF1ab_pp1ab R5663L 1.00e+0 B.1.1.306
V29 -142G>T upstream_gene_variant ORF1ab_pp1a None 1.00e+0 B.1.1.306
V2919 17173G>T missense_variant ORF1ab_pp1ab D5725Y 1.00e+0 B.1.1.306
V2923 17198G>T missense_variant ORF1ab_pp1ab R5733L 1.00e+0 B.1.1.306
V2933 17287G>T stop_gained ORF1ab_pp1ab G5763* 1.00e+0 B.1.1.306
V2935 17297G>T missense_variant ORF1ab_pp1ab R5766L 1.00e+0 B.1.1.306
V2936 17300G>T missense_variant ORF1ab_pp1ab R5767L 1.00e+0 B.1.1.306
V2956 17455G>T missense_variant ORF1ab_pp1ab V5819L 1.00e+0 B.1.1.306
V296 551G>T missense_variant ORF1ab_pp1a R184L 1.00e+0 B.1.1.306
V2960 17477G>T missense_variant ORF1ab_pp1ab R5826L 1.00e+0 B.1.1.306
V297 559G>T missense_variant ORF1ab_pp1a D187Y 1.00e+0 B.1.1.306
V2992 17753G>T missense_variant ORF1ab_pp1ab R5918L 1.00e+0 B.1.1.306
V3039 18002G>T missense_variant ORF1ab_pp1ab R6001L 1.00e+0 B.1.1.306
V3040 18004G>T stop_gained ORF1ab_pp1ab E6002* 1.00e+0 B.1.1.306
V3045 18026G>T missense_variant ORF1ab_pp1ab R6009L 1.00e+0 B.1.1.306
V3048 18043G>T missense_variant ORF1ab_pp1ab D6015Y 1.00e+0 B.1.1.306
V3049 18049G>T stop_gained ORF1ab_pp1ab E6017* 1.00e+0 B.1.1.306
V3085 18263G>T missense_variant ORF1ab_pp1ab R6088L 1.00e+0 B.1.1.306
V3092 18319G>T missense_variant ORF1ab_pp1ab V6107L 1.00e+0 B.1.1.306
V3102 18389G>T missense_variant ORF1ab_pp1ab R6130L 1.00e+0 B.1.1.306
V3105 18413G>T missense_variant ORF1ab_pp1ab R6138L 7.07e-1 B.1.1.306
V311 620G>T missense_variant ORF1ab_pp1a R207L 1.00e+0 B.1.1.306
V3130 18625G>T stop_gained ORF1ab_pp1ab E6209* 1.00e+0 B.1.1.306
V3135 18641G>T missense_variant ORF1ab_pp1ab R6214L 7.07e-1 B.1.1.306
V3187 18943G>T missense_variant ORF1ab_pp1ab D6315Y 1.00e+0 B.1.1.306
V321 649G>T stop_gained ORF1ab_pp1a E217* 1.00e+0 B.1.1.306
V3216 19202G>T missense_variant ORF1ab_pp1ab R6401L 1.00e+0 B.1.1.306
V3220 19261G>T missense_variant ORF1ab_pp1ab D6421Y 1.00e+0 B.1.1.306
V3254 19538G>T missense_variant ORF1ab_pp1ab R6513L 1.00e+0 B.1.1.306
V3293 19769G>T missense_variant ORF1ab_pp1ab R6590L 7.07e-1 B.1.1.306
V332 695G>T missense_variant ORF1ab_pp1a R232L 1.00e+0 B.1.1.306
V3331 20027G>T missense_variant ORF1ab_pp1ab R6676L 1.00e+0 B.1.1.306
V3334 20053G>T stop_gained ORF1ab_pp1ab E6685* 1.00e+0 B.1.1.306
V3338 20062G>T missense_variant ORF1ab_pp1ab V6688F 1.00e+0 B.1.1.306
V3345 20126G>T missense_variant ORF1ab_pp1ab R6709L 1.00e+0 B.1.1.306
V336 731G>T missense_variant ORF1ab_pp1a R244L 1.00e+0 B.1.1.306
V3415 20527G>T missense_variant ORF1ab_pp1ab A6843S 1.00e+0 B.1.1.306
V3428 20683G>T missense_variant ORF1ab_pp1ab D6895Y 1.00e+0 B.1.1.306
V3444 20791G>T missense_variant ORF1ab_pp1ab D6931Y 1.00e+0 B.1.1.306
V3462 20893G>T missense_variant ORF1ab_pp1ab V6965L 1.00e+0 B.1.1.306
V3487 21041G>T missense_variant ORF1ab_pp1ab R7014L 1.00e+0 B.1.1.306
V3488 21043G>T stop_gained ORF1ab_pp1ab E7015* 1.00e+0 B.1.1.306
V3517 -5G>T upstream_gene_variant S None 1.00e+0 B.1.1.306
V3562 101G>T missense_variant S R34L 1.00e+0 B.1.1.306
V3621 367G>T missense_variant S A123S 7.07e-1 B.1.1.306
V370 902G>T missense_variant ORF1ab_pp1a R301L 1.00e+0 B.1.1.306
V38 -114G>T upstream_gene_variant ORF1ab_pp1a None 1.00e+0 B.1.1.306
V3822 1030G>T missense_variant S A344S 1.00e+0 B.1.1.306
V3857 1231G>T missense_variant S A411S 1.00e+0 B.1.1.306
V3959 1730G>T missense_variant S R577L 1.00e+0 B.1.1.306
V396 1003G>T missense_variant ORF1ab_pp1a D335Y 1.00e+0 B.1.1.306
V3985 1901G>T missense_variant S R634L 1.00e+0 B.1.1.306
V3991 1937G>T missense_variant S R646L 1.00e+0 B.1.1.306
V4005 2014G>T missense_variant S A672S 1.00e+0 B.1.1.306
V401 1024G>T stop_gained ORF1ab_pp1a E342* 1.00e+0 B.1.1.306
V4025 2045G>T missense_variant S R682L 1.00e+0 B.1.1.306
V4026 2048G>T missense_variant S R683L 1.00e+0 B.1.1.306
V4029 2054G>T missense_variant S R685L 1.00e+0 B.1.1.306
V4065 2294G>T missense_variant S R765L 1.00e+0 B.1.1.306
V41 -101G>T upstream_gene_variant ORF1ab_pp1a None 1.00e+0 B.1.1.306
V4109 2569G>T missense_variant S G857C 1.00e+0 B.1.1.306
V4150 2948G>T missense_variant S R983L 1.00e+0 B.1.1.306
V4185 3272G>T missense_variant S R1091L 1.00e+0 B.1.1.306
V4235 3554G>T missense_variant S R1185L 1.00e+0 B.1.1.306
V4244 3595G>T missense_variant S D1199Y 7.07e-1 B.1.1.306
V4302 -6G>T upstream_gene_variant ORF3a None 1.00e+0 B.1.1.306
V4345 89G>T missense_variant ORF3a R30L 1.00e+0 B.1.1.306
V4347 91G>T missense_variant ORF3a A31S 1.00e+0 B.1.1.306
V437 1156G>T stop_gained ORF1ab_pp1a E386* 1.00e+0 B.1.1.306
V4379 130G>T stop_gained ORF3a G44* 1.00e+0 B.1.1.306
V4391 148G>T missense_variant ORF3a V50F 1.00e+0 B.1.1.306
V4410 175G>T missense_variant ORF3a A59S 1.00e+0 B.1.1.306
V446 1193G>T missense_variant ORF1ab_pp1a R398L 1.00e+0 B.1.1.306
V4512 401G>T missense_variant ORF3a R134L 1.00e+0 B.1.1.306
V453 1205G>T missense_variant ORF1ab_pp1a R402L 1.00e+0 B.1.1.306
V4614 751G>T missense_variant ORF3a G251C 7.07e-1 B.1.1.306
V4620 760G>T stop_gained ORF3a G254* 7.07e-1 B.1.1.306
V464 1277G>T missense_variant ORF1ab_pp1a R426L 1.00e+0 B.1.1.306
V4652 817G>T missense_variant ORF3a V273L 1.00e+0 B.1.1.306
V4672 70G>T missense_variant E V24L 1.00e+0 B.1.1.306
V4678 145G>T missense_variant E V49L 1.00e+0 B.1.1.306
V4686 182G>T missense_variant E R61L 1.00e+0 B.1.1.306
V469 1285G>T missense_variant ORF1ab_pp1a A429S 1.00e+0 B.1.1.306
V4722 16G>T missense_variant M G6C 1.00e+0 B.1.1.306
V4757 232G>T missense_variant M G78C 7.07e-1 B.1.1.306
V4763 247G>T missense_variant M A83S 1.00e+0 B.1.1.306
V4772 320G>T missense_variant M R107L 1.00e+0 B.1.1.306
V4782 473G>T missense_variant M R158L 1.00e+0 B.1.1.306
V4784 521G>T missense_variant M R174L 1.00e+0 B.1.1.306
V4788 593G>T missense_variant M R198L 1.00e+0 B.1.1.306
V48 -92G>T upstream_gene_variant ORF1ab_pp1a None 1.00e+0 B.1.1.306
V4800 13G>T missense_variant ORF6 V5F 1.00e+0 B.1.1.306
V484 1330G>T stop_gained ORF1ab_pp1a E444* 1.00e+0 B.1.1.306
V4844 -4G>T upstream_gene_variant ORF7a None 1.00e+0 B.1.1.306
V4864 37G>T missense_variant ORF7a A13S 1.00e+0 B.1.1.306
V4895 121G>T stop_gained ORF7a E41* 1.00e+0 B.1.1.306
V4932 211G>T missense_variant ORF7a V71L 1.00e+0 B.1.1.306
V4937 220G>T missense_variant ORF7a V74F 1.00e+0 B.1.1.306
V4943 233G>T missense_variant ORF7a R78L 1.00e+0 B.1.1.306
V5056 127G>T missense_variant ORF7b A43S 1.00e+0 B.1.1.306
V5061 -4G>T upstream_gene_variant ORF8 None 1.00e+0 B.1.1.306
V511 1420G>T missense_variant ORF1ab_pp1a A474S 1.00e+0 B.1.1.306
V5173 223G>T missense_variant ORF8 D75Y 1.00e+0 B.1.1.306
V5176 229G>T missense_variant ORF8 G77C 1.00e+0 B.1.1.306
V5196 302G>T missense_variant ORF8 R101L 1.00e+0 B.1.1.306
V5209 340G>T missense_variant ORF8 V114F 1.00e+0 B.1.1.306
V5212 344G>T missense_variant ORF8 R115L 7.07e-1 B.1.1.306
V5234 -12G>T upstream_gene_variant N None 1.00e+0 B.1.1.306
V5266 29G>T missense_variant N R10L 1.00e+0 B.1.1.306
V5277 41G>T missense_variant N R14L 1.00e+0 B.1.1.306
V5324 107G>T missense_variant N R36L 1.00e+0 B.1.1.306
V5331 119G>T missense_variant N R40L 1.00e+0 B.1.1.306
V5333 122G>T missense_variant N R41L 1.00e+0 B.1.1.306
V5337 163G>T missense_variant N A55S 1.00e+0 B.1.1.306
V5345 203G>T missense_variant N R68L 1.00e+0 B.1.1.306
V5349 214G>T missense_variant N V72F 1.00e+0 B.1.1.306
V5355 263G>T missense_variant N R88L 1.00e+0 B.1.1.306
V5359 278G>T missense_variant N R93L 1.00e+0 B.1.1.306
V5361 284G>T missense_variant N R95L 1.00e+0 B.1.1.306
V5364 295G>T missense_variant N G99C 1.00e+0 B.1.1.306
V5379 385G>T missense_variant N G129C 1.00e+0 B.1.1.306
V5395 446G>T missense_variant N R149L 1.00e+0 B.1.1.306
V5404 472G>T missense_variant N V158L 1.00e+0 B.1.1.306
V5414 517G>T missense_variant N A173S 1.00e+0 B.1.1.306
V5419 535G>T missense_variant N G179C 1.00e+0 B.1.1.306
V5429 554G>T missense_variant N R185L 1.00e+0 B.1.1.306
V5434 566G>T missense_variant N R189L 1.00e+0 B.1.1.306
V5437 572G>T missense_variant N R191L 1.00e+0 B.1.1.306
V5467 611G>T missense_variant N G204V 7.07e-1 B.1.1.306
V5496 643G>T missense_variant N G215C 1.00e+0 B.1.1.306
V5536 776G>T missense_variant N R259L 1.00e+0 B.1.1.306
V5537 785G>T missense_variant N R262L 1.00e+0 B.1.1.306
V554 1625G>T missense_variant ORF1ab_pp1a R542L 7.07e-1 B.1.1.306
V5546 823G>T missense_variant N G275C 1.00e+0 B.1.1.306
V5547 830G>T missense_variant N R277L 1.00e+0 B.1.1.306
V556 1634G>T missense_variant ORF1ab_pp1a R545L 1.00e+0 B.1.1.306
V5565 931G>T missense_variant N A311S 1.00e+0 B.1.1.306
V5566 946G>T stop_gained N G316* 1.00e+0 B.1.1.306
V5570 956G>T missense_variant N R319L 1.00e+0 B.1.1.306
V563 1649G>T missense_variant ORF1ab_pp1a R550L 1.00e+0 B.1.1.306
V5688 16G>T missense_variant ORF10 V6F 1.00e+0 B.1.1.306
V5708 71G>T missense_variant ORF10 R24L 1.00e+0 B.1.1.306
V574 1679G>T missense_variant ORF1ab_pp1a R560L 1.00e+0 B.1.1.306
V5762 *4350G>T downstream_gene_variant S None 7.07e-1 B.1.1.306
V5790 *4367G>T downstream_gene_variant S None 7.07e-1 B.1.1.306
V581 1696G>T missense_variant ORF1ab_pp1a A566S 1.00e+0 B.1.1.306
V5875 222G>T synonymous_variant ORF1ab_pp1a S74S 7.07e-1 B.1.1.306
V5970 726G>T synonymous_variant ORF1ab_pp1a T242T 1.00e+0 B.1.1.306
V5998 921G>T synonymous_variant ORF1ab_pp1a A307A 1.00e+0 B.1.1.306
V6010 999G>T synonymous_variant ORF1ab_pp1a T333T 7.07e-1 B.1.1.306
V61 -68G>T upstream_gene_variant ORF1ab_pp1a None 1.00e+0 B.1.1.306
V6121 1830G>T synonymous_variant ORF1ab_pp1a S610S 1.00e+0 B.1.1.306
V6165 2133G>T synonymous_variant ORF1ab_pp1a T711T 1.00e+0 B.1.1.306
V631 1879G>T missense_variant ORF1ab_pp1a V627F 1.00e+0 B.1.1.306
V643 1933G>T missense_variant ORF1ab_pp1a G645C 1.00e+0 B.1.1.306
V6481 4455G>T synonymous_variant ORF1ab_pp1a A1485A 7.07e-1 B.1.1.306
V6521 4743G>T synonymous_variant ORF1ab_pp1a T1581T 7.07e-1 B.1.1.306
V657 1981G>T missense_variant ORF1ab_pp1a G661C 1.00e+0 B.1.1.306
V6610 5364G>T synonymous_variant ORF1ab_pp1a T1788T 1.00e+0 B.1.1.306
V6634 5592G>T synonymous_variant ORF1ab_pp1a T1864T 1.00e+0 B.1.1.306
V6686 6006G>T synonymous_variant ORF1ab_pp1a T2002T 1.00e+0 B.1.1.306
V6695 6072G>T synonymous_variant ORF1ab_pp1a S2024S 1.00e+0 B.1.1.306
V6704 6099G>T synonymous_variant ORF1ab_pp1a A2033A 1.00e+0 B.1.1.306
V6765 6585G>T synonymous_variant ORF1ab_pp1a P2195P 1.00e+0 B.1.1.306
V6830 7128G>T synonymous_variant ORF1ab_pp1a P2376P 7.07e-1 B.1.1.306
V6908 7791G>T synonymous_variant ORF1ab_pp1a T2597T 1.00e+0 B.1.1.306
V6950 8088G>T synonymous_variant ORF1ab_pp1a A2696A 1.00e+0 B.1.1.306
V6952 8103G>T synonymous_variant ORF1ab_pp1a A2701A 1.00e+0 B.1.1.306
V7125 9537G>T synonymous_variant ORF1ab_pp1a A3179A 1.00e+0 B.1.1.306
V7140 9606G>T synonymous_variant ORF1ab_pp1a T3202T 1.00e+0 B.1.1.306
V72 -58G>T upstream_gene_variant ORF1ab_pp1a None 1.00e+0 B.1.1.306
V747 2359G>T missense_variant ORF1ab_pp1a G787W 1.00e+0 B.1.1.306
V7480 12249G>T synonymous_variant ORF1ab_pp1a T4083T 1.00e+0 B.1.1.306
V7502 12504G>T synonymous_variant ORF1ab_pp1a A4168A 1.00e+0 B.1.1.306
V752 2374G>T stop_gained ORF1ab_pp1a E792* 1.00e+0 B.1.1.306
V7567 12975G>T synonymous_variant ORF1ab_pp1a S4325S 1.00e+0 B.1.1.306
V7602 13194G>T synonymous_variant ORF1ab_pp1a S4398S 1.00e+0 B.1.1.306
V7604 13239G>T synonymous_variant ORF1ab_pp1ab P4413P 1.00e+0 B.1.1.306
V762 2452G>T missense_variant ORF1ab_pp1a G818C 1.00e+0 B.1.1.306
V7677 13854G>T synonymous_variant ORF1ab_pp1ab T4618T 7.07e-1 B.1.1.306
V7699 14004G>T synonymous_variant ORF1ab_pp1ab T4668T 1.00e+0 B.1.1.306
V7751 14358G>T synonymous_variant ORF1ab_pp1ab T4786T 1.00e+0 B.1.1.306
V782 2593G>T missense_variant ORF1ab_pp1a G865C 1.00e+0 B.1.1.306
V787 2614G>T missense_variant ORF1ab_pp1a A872S 1.00e+0 B.1.1.306
V7951 15957G>T synonymous_variant ORF1ab_pp1ab P5319P 1.00e+0 B.1.1.306
V8011 16383G>T synonymous_variant ORF1ab_pp1ab T5461T 7.07e-1 B.1.1.306
V8145 17415G>T synonymous_variant ORF1ab_pp1ab T5805T 7.07e-1 B.1.1.306
V8252 18198G>T synonymous_variant ORF1ab_pp1ab P6066P 1.00e+0 B.1.1.306
V8328 18696G>T synonymous_variant ORF1ab_pp1ab A6232A 1.00e+0 B.1.1.306
V8388 19191G>T synonymous_variant ORF1ab_pp1ab T6397T 1.00e+0 B.1.1.306
V8446 19698G>T synonymous_variant ORF1ab_pp1ab T6566T 7.07e-1 B.1.1.306
V8502 20205G>T synonymous_variant ORF1ab_pp1ab A6735A 1.00e+0 B.1.1.306
V8519 20406G>T synonymous_variant ORF1ab_pp1ab A6802A 7.07e-1 B.1.1.306
V8547 20667G>T synonymous_variant ORF1ab_pp1ab T6889T 7.07e-1 B.1.1.306
V8549 20673G>T synonymous_variant ORF1ab_pp1ab T6891T 1.00e+0 B.1.1.306
V8698 489G>T synonymous_variant S A163A 7.07e-1 B.1.1.306
V8711 624G>T synonymous_variant S T208T 1.00e+0 B.1.1.306
V882 2977G>T missense_variant ORF1ab_pp1a G993C 1.00e+0 B.1.1.306
V8973 2637G>T synonymous_variant S A879A 1.00e+0 B.1.1.306
V9003 2883G>T synonymous_variant S T961T 7.07e-1 B.1.1.306
V9151 102G>T synonymous_variant ORF3a T34T 7.07e-1 B.1.1.306
V9154 108G>T synonymous_variant ORF3a P36P 1.00e+0 B.1.1.306
V9253 801G>T synonymous_variant ORF3a P267P 1.00e+0 B.1.1.306
V9254 804G>T synonymous_variant ORF3a T268T 1.00e+0 B.1.1.306
V9256 807G>T synonymous_variant ORF3a T269T 1.00e+0 B.1.1.306
V9274 108G>T synonymous_variant E A36A 1.00e+0 B.1.1.306
V9351 396G>T synonymous_variant M P132P 1.00e+0 B.1.1.306
V9381 552G>T synonymous_variant M S184S 7.07e-1 B.1.1.306
V9480 315G>T synonymous_variant ORF7a A105A 7.07e-1 B.1.1.306
V9550 309G>T synonymous_variant ORF8 S103S 1.00e+0 B.1.1.306
V9596 150G>T synonymous_variant N A50A 7.07e-1 B.1.1.306
V9744 906G>T synonymous_variant N P302P 7.07e-1 B.1.1.306
V9753 939G>T synonymous_variant N A313A 7.07e-1 B.1.1.306
V978 3319G>T stop_gained ORF1ab_pp1a G1107* 1.00e+0 B.1.1.306
V9824 30G>T synonymous_variant ORF10 P10P 7.07e-1 B.1.1.306
V9825 36G>T synonymous_variant ORF10 T12T 1.00e+0 B.1.1.306
V988 3355G>T missense_variant ORF1ab_pp1a G1119C 1.00e+0 B.1.1.306
V3685 531G>C missense_variant S M177I 1.00e+0 B.1.177.65
V4122 2695G>T missense_variant S A899S 1.00e+0 B.1.177.65
V7422 11808C>T synonymous_variant ORF1ab_pp1a D3936D 1.00e+0 B.1.177.65
V8396 19260C>T synonymous_variant ORF1ab_pp1ab L6420L 1.00e+0 B.1.177.65
V1002 3424G>T stop_gained ORF1ab_pp1a E1142* 7.07e-1 B.1.36.16
V1026 3509G>T missense_variant ORF1ab_pp1a R1170L 1.00e+0 B.1.36.16
V103 -20G>T upstream_gene_variant ORF1ab_pp1a None 1.00e+0 B.1.36.16
V1047 3610G>T missense_variant ORF1ab_pp1a A1204S 1.00e+0 B.1.36.16
V11 -194G>T upstream_gene_variant ORF1ab_pp1a None 1.00e+0 B.1.36.16
V111 -10G>T upstream_gene_variant ORF1ab_pp1a None 1.00e+0 B.1.36.16
V1133 4127G>T missense_variant ORF1ab_pp1a R1376L 1.00e+0 B.1.36.16
V1139 4157G>T missense_variant ORF1ab_pp1a R1386L 1.00e+0 B.1.36.16
V1146 4211G>T missense_variant ORF1ab_pp1a R1404L 1.00e+0 B.1.36.16
V1159 4318G>T missense_variant ORF1ab_pp1a D1440Y 1.00e+0 B.1.36.16
V1164 4391G>T missense_variant ORF1ab_pp1a R1464L 1.00e+0 B.1.36.16
V118 28G>T stop_gained ORF1ab_pp1a E10* 1.00e+0 B.1.36.16
V120 40G>T missense_variant ORF1ab_pp1a V14F 1.00e+0 B.1.36.16
V124 71G>T missense_variant ORF1ab_pp1a R24L 1.00e+0 B.1.36.16
V125 73G>T missense_variant ORF1ab_pp1a D25Y 1.00e+0 B.1.36.16
V1252 4883G>T missense_variant ORF1ab_pp1a R1628L 1.00e+0 B.1.36.16
V126 76G>T missense_variant ORF1ab_pp1a V26L 1.00e+0 B.1.36.16
V1298 5248G>T missense_variant ORF1ab_pp1a V1750L 1.00e+0 B.1.36.16
V130 82G>T missense_variant ORF1ab_pp1a V28L 1.00e+0 B.1.36.16
V132 86G>T missense_variant ORF1ab_pp1a R29L 1.00e+0 B.1.36.16
V1345 5548G>T missense_variant ORF1ab_pp1a G1850C 1.00e+0 B.1.36.16
V1374 5767G>T missense_variant ORF1ab_pp1a A1923S 1.00e+0 B.1.36.16
V139 103G>T missense_variant ORF1ab_pp1a V35L 1.00e+0 B.1.36.16
V1409 6032G>T missense_variant ORF1ab_pp1a R2011L 1.00e+0 B.1.36.16
V1432 6097G>T missense_variant ORF1ab_pp1a A2033S 1.00e+0 B.1.36.16
V1439 6124G>T stop_gained ORF1ab_pp1a E2042* 1.00e+0 B.1.36.16
V1458 6181G>T missense_variant ORF1ab_pp1a V2061F 1.00e+0 B.1.36.16
V146 128G>T missense_variant ORF1ab_pp1a R43L 1.00e+0 B.1.36.16
V1464 6208G>T stop_gained ORF1ab_pp1a E2070* 1.00e+0 B.1.36.16
V1544 6476G>T missense_variant ORF1ab_pp1a R2159L 1.00e+0 B.1.36.16
V1546 6488G>T missense_variant ORF1ab_pp1a R2163L 1.00e+0 B.1.36.16
V1565 6619G>T missense_variant ORF1ab_pp1a G2207C 7.07e-1 B.1.36.16
V1578 6742G>T missense_variant ORF1ab_pp1a A2248S 1.00e+0 B.1.36.16
V162 178G>T missense_variant ORF1ab_pp1a V60F 1.00e+0 B.1.36.16
V1644 7207G>T missense_variant ORF1ab_pp1a G2403C 1.00e+0 B.1.36.16
V1649 7244G>T missense_variant ORF1ab_pp1a R2415L 1.00e+0 B.1.36.16
V1651 7264G>T stop_gained ORF1ab_pp1a E2422* 1.00e+0 B.1.36.16
V1662 7471G>T missense_variant ORF1ab_pp1a V2491F 1.00e+0 B.1.36.16
V168 218G>T missense_variant ORF1ab_pp1a R73L 1.00e+0 B.1.36.16
V1712 7783G>T missense_variant ORF1ab_pp1a V2595F 1.00e+0 B.1.36.16
V1716 7810G>T missense_variant ORF1ab_pp1a V2604L 1.00e+0 B.1.36.16
V1743 7913G>T missense_variant ORF1ab_pp1a R2638L 1.00e+0 B.1.36.16
V175 230G>T missense_variant ORF1ab_pp1a R77L 1.00e+0 B.1.36.16
V1753 8002G>T missense_variant ORF1ab_pp1a D2668Y 1.00e+0 B.1.36.16
V1760 8057G>T missense_variant ORF1ab_pp1a R2686L 1.00e+0 B.1.36.16
V1766 8090G>T missense_variant ORF1ab_pp1a R2697L 1.00e+0 B.1.36.16
V1774 8143G>T missense_variant ORF1ab_pp1a V2715F 1.00e+0 B.1.36.16
V1777 8177G>T missense_variant ORF1ab_pp1a R2726L 1.00e+0 B.1.36.16
V1778 8189G>T missense_variant ORF1ab_pp1a R2730L 1.00e+0 B.1.36.16
V1819 8453G>T missense_variant ORF1ab_pp1a R2818L 1.00e+0 B.1.36.16
V1829 8522G>T missense_variant ORF1ab_pp1a R2841L 1.00e+0 B.1.36.16
V1846 8596G>T missense_variant ORF1ab_pp1a V2866L 1.00e+0 B.1.36.16
V1857 8624G>T missense_variant ORF1ab_pp1a R2875L 1.00e+0 B.1.36.16
V1883 8846G>T missense_variant ORF1ab_pp1a R2949L 1.00e+0 B.1.36.16
V1886 8858G>T missense_variant ORF1ab_pp1a R2953L 1.00e+0 B.1.36.16
V1900 8959G>T missense_variant ORF1ab_pp1a G2987C 1.00e+0 B.1.36.16
V1961 9491G>T missense_variant ORF1ab_pp1a R3164L 1.00e+0 B.1.36.16
V1964 9581G>T missense_variant ORF1ab_pp1a R3194L 1.00e+0 B.1.36.16
V1979 9703G>T missense_variant ORF1ab_pp1a A3235S 1.00e+0 B.1.36.16
V1993 9874G>T missense_variant ORF1ab_pp1a G3292C 1.00e+0 B.1.36.16
V1997 9892G>T missense_variant ORF1ab_pp1a V3298L 1.00e+0 B.1.36.16
V2005 9968G>T missense_variant ORF1ab_pp1a R3323L 1.00e+0 B.1.36.16
V2030 10103G>T missense_variant ORF1ab_pp1a R3368L 1.00e+0 B.1.36.16
V2055 10417G>T missense_variant ORF1ab_pp1a A3473S 1.00e+0 B.1.36.16
V2060 10454G>T missense_variant ORF1ab_pp1a R3485L 1.00e+0 B.1.36.16
V207 277G>T stop_gained ORF1ab_pp1a E93* 1.00e+0 B.1.36.16
V2079 10570G>T missense_variant ORF1ab_pp1a V3524F 1.00e+0 B.1.36.16
V2087 10625G>T missense_variant ORF1ab_pp1a R3542L 1.00e+0 B.1.36.16
V21 -165G>T upstream_gene_variant ORF1ab_pp1a None 1.00e+0 B.1.36.16
V212 292G>T missense_variant ORF1ab_pp1a G98C 1.00e+0 B.1.36.16
V215 296G>T missense_variant ORF1ab_pp1a R99L 1.00e+0 B.1.36.16
V2151 10985G>T missense_variant ORF1ab_pp1a R3662L 1.00e+0 B.1.36.16
V2188 11152G>T missense_variant ORF1ab_pp1a V3718F 1.00e+0 B.1.36.16
V2238 11405G>T missense_variant ORF1ab_pp1a R3802L 1.00e+0 B.1.36.16
V228 337G>T stop_gained ORF1ab_pp1a E113* 1.00e+0 B.1.36.16
V2310 11978G>T missense_variant ORF1ab_pp1a R3993L 1.00e+0 B.1.36.16
V2313 11996G>T missense_variant ORF1ab_pp1a R3999L 1.00e+0 B.1.36.16
V2358 12449G>T missense_variant ORF1ab_pp1a R4150L 1.00e+0 B.1.36.16
V2362 12469G>T missense_variant ORF1ab_pp1a G4157C 1.00e+0 B.1.36.16
V2386 12559G>T missense_variant ORF1ab_pp1a D4187Y 1.00e+0 B.1.36.16
V239 356G>T missense_variant ORF1ab_pp1a R119L 1.00e+0 B.1.36.16
V2406 12752G>T missense_variant ORF1ab_pp1a R4251L 1.00e+0 B.1.36.16
V2424 12992G>T missense_variant ORF1ab_pp1a R4331L 1.00e+0 B.1.36.16
V243 371G>T missense_variant ORF1ab_pp1a R124L 1.00e+0 B.1.36.16
V2438 13114G>T missense_variant ORF1ab_pp1a V4372F 1.00e+0 B.1.36.16
V2439 13120G>T missense_variant ORF1ab_pp1a G4374C 1.00e+0 B.1.36.16
V2445 13160G>T missense_variant ORF1ab_pp1a R4387L 1.00e+0 B.1.36.16
V2446 13162G>T stop_gained ORF1ab_pp1a E4388* 1.00e+0 B.1.36.16
V245 379G>T missense_variant ORF1ab_pp1a G127C 1.00e+0 B.1.36.16
V2452 13204G>T missense_variant ORF1ab_pp1a G4402W 1.00e+0 B.1.36.16
V2453 13213G>T missense_variant ORF1ab_pp1ab G4405C 1.00e+0 B.1.36.16
V2456 13229G>T missense_variant ORF1ab_pp1ab R4410L 1.00e+0 B.1.36.16
V2459 13243G>T missense_variant ORF1ab_pp1ab G4415C 1.00e+0 B.1.36.16
V2463 13267G>T missense_variant ORF1ab_pp1ab V4423L 1.00e+0 B.1.36.16
V2470 13340G>T missense_variant ORF1ab_pp1ab R4447L 1.00e+0 B.1.36.16
V2496 13498G>T missense_variant ORF1ab_pp1ab G4500C 1.00e+0 B.1.36.16
V2500 13523G>T missense_variant ORF1ab_pp1ab R4508L 1.00e+0 B.1.36.16
V2503 13529G>T missense_variant ORF1ab_pp1ab R4510L 1.00e+0 B.1.36.16
V2507 13558G>T missense_variant ORF1ab_pp1ab V4520F 1.00e+0 B.1.36.16
V251 409G>T missense_variant ORF1ab_pp1a G137C 1.00e+0 B.1.36.16
V2528 13694G>T missense_variant ORF1ab_pp1ab R4565L 1.00e+0 B.1.36.16
V2529 13696G>T missense_variant ORF1ab_pp1ab V4566L 1.00e+0 B.1.36.16
V2532 13702G>T missense_variant ORF1ab_pp1ab A4568S 1.00e+0 B.1.36.16
V2534 13718G>T missense_variant ORF1ab_pp1ab R4573L 1.00e+0 B.1.36.16
V2535 13724G>T missense_variant ORF1ab_pp1ab R4575L 1.00e+0 B.1.36.16
V2540 13766G>T missense_variant ORF1ab_pp1ab R4589L 1.00e+0 B.1.36.16
V2543 13834G>T missense_variant ORF1ab_pp1ab G4612C 1.00e+0 B.1.36.16
V255 412G>T missense_variant ORF1ab_pp1a A138S 1.00e+0 B.1.36.16
V257 415G>T missense_variant ORF1ab_pp1a D139Y 1.00e+0 B.1.36.16
V2584 14030G>T missense_variant ORF1ab_pp1ab R4677L 1.00e+0 B.1.36.16
V2612 14320G>T missense_variant ORF1ab_pp1ab A4774S 1.00e+0 B.1.36.16
V2615 14351G>T missense_variant ORF1ab_pp1ab R4784L 1.00e+0 B.1.36.16
V2620 14413G>T missense_variant ORF1ab_pp1ab G4805C 1.00e+0 B.1.36.16
V2631 14530G>T missense_variant ORF1ab_pp1ab D4844Y 1.00e+0 B.1.36.16
V2632 14546G>T missense_variant ORF1ab_pp1ab R4849L 1.00e+0 B.1.36.16
V2641 14659G>T missense_variant ORF1ab_pp1ab V4887F 1.00e+0 B.1.36.16
V2652 14761G>T missense_variant ORF1ab_pp1ab A4921S 1.00e+0 B.1.36.16
V2654 14774G>T missense_variant ORF1ab_pp1ab R4925L 1.00e+0 B.1.36.16
V2656 14840G>T missense_variant ORF1ab_pp1ab R4947L 1.00e+0 B.1.36.16
V2657 14845G>T missense_variant ORF1ab_pp1ab V4949L 1.00e+0 B.1.36.16
V2680 15095G>T missense_variant ORF1ab_pp1ab R5032L 1.00e+0 B.1.36.16
V2687 15128G>T missense_variant ORF1ab_pp1ab R5043L 1.00e+0 B.1.36.16
V269 439G>T missense_variant ORF1ab_pp1a D147Y 1.00e+0 B.1.36.16
V2695 15187G>T missense_variant ORF1ab_pp1ab G5063C 1.00e+0 B.1.36.16
V270 442G>T stop_gained ORF1ab_pp1a E148* 1.00e+0 B.1.36.16
V2702 15325G>T missense_variant ORF1ab_pp1ab D5109Y 1.00e+0 B.1.36.16
V2706 15338G>T missense_variant ORF1ab_pp1ab R5113L 1.00e+0 B.1.36.16
V2715 15415G>T missense_variant ORF1ab_pp1ab A5139S 1.00e+0 B.1.36.16
V2716 15425G>T missense_variant ORF1ab_pp1ab R5142L 1.00e+0 B.1.36.16
V2745 15718G>T missense_variant ORF1ab_pp1ab V5240L 1.00e+0 B.1.36.16
V2746 15749G>T missense_variant ORF1ab_pp1ab R5250L 1.00e+0 B.1.36.16
V2747 15754G>T missense_variant ORF1ab_pp1ab V5252L 1.00e+0 B.1.36.16
V2772 16034G>T missense_variant ORF1ab_pp1ab R5345L 1.00e+0 B.1.36.16
V2796 16273G>T missense_variant ORF1ab_pp1ab D5425Y 1.00e+0 B.1.36.16
V2812 16436G>T missense_variant ORF1ab_pp1ab R5479L 1.00e+0 B.1.36.16
V2822 16505G>T missense_variant ORF1ab_pp1ab R5502L 1.00e+0 B.1.36.16
V2823 16529G>T missense_variant ORF1ab_pp1ab R5510L 1.00e+0 B.1.36.16
V2834 16607G>T missense_variant ORF1ab_pp1ab R5536L 7.07e-1 B.1.36.16
V285 512G>T missense_variant ORF1ab_pp1a R171L 1.00e+0 B.1.36.16
V287 524G>T missense_variant ORF1ab_pp1a R175L 1.00e+0 B.1.36.16
V2880 16880G>T missense_variant ORF1ab_pp1ab R5627L 7.07e-1 B.1.36.16
V2884 16909G>T missense_variant ORF1ab_pp1ab A5637S 7.07e-1 B.1.36.16
V289 535G>T stop_gained ORF1ab_pp1a G179* 1.00e+0 B.1.36.16
V2894 16982G>T missense_variant ORF1ab_pp1ab R5661L 1.00e+0 B.1.36.16
V2896 16988G>T missense_variant ORF1ab_pp1ab R5663L 1.00e+0 B.1.36.16
V29 -142G>T upstream_gene_variant ORF1ab_pp1a None 1.00e+0 B.1.36.16
V2919 17173G>T missense_variant ORF1ab_pp1ab D5725Y 1.00e+0 B.1.36.16
V2923 17198G>T missense_variant ORF1ab_pp1ab R5733L 1.00e+0 B.1.36.16
V2933 17287G>T stop_gained ORF1ab_pp1ab G5763* 1.00e+0 B.1.36.16
V2935 17297G>T missense_variant ORF1ab_pp1ab R5766L 1.00e+0 B.1.36.16
V2936 17300G>T missense_variant ORF1ab_pp1ab R5767L 1.00e+0 B.1.36.16
V2956 17455G>T missense_variant ORF1ab_pp1ab V5819L 1.00e+0 B.1.36.16
V296 551G>T missense_variant ORF1ab_pp1a R184L 1.00e+0 B.1.36.16
V2960 17477G>T missense_variant ORF1ab_pp1ab R5826L 1.00e+0 B.1.36.16
V297 559G>T missense_variant ORF1ab_pp1a D187Y 1.00e+0 B.1.36.16
V2992 17753G>T missense_variant ORF1ab_pp1ab R5918L 1.00e+0 B.1.36.16
V3039 18002G>T missense_variant ORF1ab_pp1ab R6001L 1.00e+0 B.1.36.16
V3040 18004G>T stop_gained ORF1ab_pp1ab E6002* 1.00e+0 B.1.36.16
V3045 18026G>T missense_variant ORF1ab_pp1ab R6009L 1.00e+0 B.1.36.16
V3048 18043G>T missense_variant ORF1ab_pp1ab D6015Y 1.00e+0 B.1.36.16
V3049 18049G>T stop_gained ORF1ab_pp1ab E6017* 1.00e+0 B.1.36.16
V3085 18263G>T missense_variant ORF1ab_pp1ab R6088L 1.00e+0 B.1.36.16
V3092 18319G>T missense_variant ORF1ab_pp1ab V6107L 1.00e+0 B.1.36.16
V3102 18389G>T missense_variant ORF1ab_pp1ab R6130L 1.00e+0 B.1.36.16
V3105 18413G>T missense_variant ORF1ab_pp1ab R6138L 1.00e+0 B.1.36.16
V311 620G>T missense_variant ORF1ab_pp1a R207L 1.00e+0 B.1.36.16
V3115 18481G>T missense_variant ORF1ab_pp1ab V6161F 1.00e+0 B.1.36.16
V3130 18625G>T stop_gained ORF1ab_pp1ab E6209* 1.00e+0 B.1.36.16
V3135 18641G>T missense_variant ORF1ab_pp1ab R6214L 1.00e+0 B.1.36.16
V3187 18943G>T missense_variant ORF1ab_pp1ab D6315Y 1.00e+0 B.1.36.16
V321 649G>T stop_gained ORF1ab_pp1a E217* 1.00e+0 B.1.36.16
V3216 19202G>T missense_variant ORF1ab_pp1ab R6401L 1.00e+0 B.1.36.16
V3220 19261G>T missense_variant ORF1ab_pp1ab D6421Y 1.00e+0 B.1.36.16
V3254 19538G>T missense_variant ORF1ab_pp1ab R6513L 1.00e+0 B.1.36.16
V3293 19769G>T missense_variant ORF1ab_pp1ab R6590L 1.00e+0 B.1.36.16
V3310 19870G>T missense_variant ORF1ab_pp1ab V6624L 1.00e+0 B.1.36.16
V332 695G>T missense_variant ORF1ab_pp1a R232L 1.00e+0 B.1.36.16
V3331 20027G>T missense_variant ORF1ab_pp1ab R6676L 1.00e+0 B.1.36.16
V3334 20053G>T stop_gained ORF1ab_pp1ab E6685* 1.00e+0 B.1.36.16
V3338 20062G>T missense_variant ORF1ab_pp1ab V6688F 1.00e+0 B.1.36.16
V3345 20126G>T missense_variant ORF1ab_pp1ab R6709L 1.00e+0 B.1.36.16
V336 731G>T missense_variant ORF1ab_pp1a R244L 1.00e+0 B.1.36.16
V3415 20527G>T missense_variant ORF1ab_pp1ab A6843S 1.00e+0 B.1.36.16
V3428 20683G>T missense_variant ORF1ab_pp1ab D6895Y 1.00e+0 B.1.36.16
V3444 20791G>T missense_variant ORF1ab_pp1ab D6931Y 1.00e+0 B.1.36.16
V3462 20893G>T missense_variant ORF1ab_pp1ab V6965L 1.00e+0 B.1.36.16
V3475 20956G>T missense_variant ORF1ab_pp1ab A6986S 1.00e+0 B.1.36.16
V3487 21041G>T missense_variant ORF1ab_pp1ab R7014L 1.00e+0 B.1.36.16
V3488 21043G>T stop_gained ORF1ab_pp1ab E7015* 1.00e+0 B.1.36.16
V3517 -5G>T upstream_gene_variant S None 1.00e+0 B.1.36.16
V3562 101G>T missense_variant S R34L 1.00e+0 B.1.36.16
V3621 367G>T missense_variant S A123S 1.00e+0 B.1.36.16
V370 902G>T missense_variant ORF1ab_pp1a R301L 1.00e+0 B.1.36.16
V3737 641G>T missense_variant S R214L 1.00e+0 B.1.36.16
V38 -114G>T upstream_gene_variant ORF1ab_pp1a None 1.00e+0 B.1.36.16
V3822 1030G>T missense_variant S A344S 1.00e+0 B.1.36.16
V3857 1231G>T missense_variant S A411S 1.00e+0 B.1.36.16
V3959 1730G>T missense_variant S R577L 1.00e+0 B.1.36.16
V396 1003G>T missense_variant ORF1ab_pp1a D335Y 1.00e+0 B.1.36.16
V3985 1901G>T missense_variant S R634L 1.00e+0 B.1.36.16
V3991 1937G>T missense_variant S R646L 1.00e+0 B.1.36.16
V4005 2014G>T missense_variant S A672S 1.00e+0 B.1.36.16
V401 1024G>T stop_gained ORF1ab_pp1a E342* 1.00e+0 B.1.36.16
V4025 2045G>T missense_variant S R682L 1.00e+0 B.1.36.16
V4026 2048G>T missense_variant S R683L 1.00e+0 B.1.36.16
V4029 2054G>T missense_variant S R685L 1.00e+0 B.1.36.16
V4065 2294G>T missense_variant S R765L 1.00e+0 B.1.36.16
V41 -101G>T upstream_gene_variant ORF1ab_pp1a None 1.00e+0 B.1.36.16
V4109 2569G>T missense_variant S G857C 1.00e+0 B.1.36.16
V4150 2948G>T missense_variant S R983L 1.00e+0 B.1.36.16
V4185 3272G>T missense_variant S R1091L 8.16e-1 B.1.36.16
V4235 3554G>T missense_variant S R1185L 1.00e+0 B.1.36.16
V4244 3595G>T missense_variant S D1199Y 1.00e+0 B.1.36.16
V4289 3778G>T missense_variant S D1260Y 1.00e+0 B.1.36.16
V4302 -6G>T upstream_gene_variant ORF3a None 1.00e+0 B.1.36.16
V4345 89G>T missense_variant ORF3a R30L 1.00e+0 B.1.36.16
V4347 91G>T missense_variant ORF3a A31S 1.00e+0 B.1.36.16
V437 1156G>T stop_gained ORF1ab_pp1a E386* 1.00e+0 B.1.36.16
V4379 130G>T stop_gained ORF3a G44* 1.00e+0 B.1.36.16
V4391 148G>T missense_variant ORF3a V50F 1.00e+0 B.1.36.16
V4410 175G>T missense_variant ORF3a A59S 1.00e+0 B.1.36.16
V446 1193G>T missense_variant ORF1ab_pp1a R398L 1.00e+0 B.1.36.16
V4512 401G>T missense_variant ORF3a R134L 1.00e+0 B.1.36.16
V4524 463G>T missense_variant ORF3a D155Y 1.00e+0 B.1.36.16
V453 1205G>T missense_variant ORF1ab_pp1a R402L 1.00e+0 B.1.36.16
V4614 751G>T missense_variant ORF3a G251C 1.00e+0 B.1.36.16
V4620 760G>T stop_gained ORF3a G254* 1.00e+0 B.1.36.16
V464 1277G>T missense_variant ORF1ab_pp1a R426L 1.00e+0 B.1.36.16
V4652 817G>T missense_variant ORF3a V273L 1.00e+0 B.1.36.16
V4672 70G>T missense_variant E V24L 1.00e+0 B.1.36.16
V4678 145G>T missense_variant E V49L 8.16e-1 B.1.36.16
V4685 172G>T missense_variant E V58F 1.00e+0 B.1.36.16
V4686 182G>T missense_variant E R61L 8.16e-1 B.1.36.16
V469 1285G>T missense_variant ORF1ab_pp1a A429S 1.00e+0 B.1.36.16
V4722 16G>T missense_variant M G6C 1.00e+0 B.1.36.16
V4757 232G>T missense_variant M G78C 1.00e+0 B.1.36.16
V4763 247G>T missense_variant M A83S 1.00e+0 B.1.36.16
V4772 320G>T missense_variant M R107L 1.00e+0 B.1.36.16
V4782 473G>T missense_variant M R158L 1.00e+0 B.1.36.16
V4784 521G>T missense_variant M R174L 1.00e+0 B.1.36.16
V4788 593G>T missense_variant M R198L 1.00e+0 B.1.36.16
V48 -92G>T upstream_gene_variant ORF1ab_pp1a None 1.00e+0 B.1.36.16
V4800 13G>T missense_variant ORF6 V5F 1.00e+0 B.1.36.16
V484 1330G>T stop_gained ORF1ab_pp1a E444* 1.00e+0 B.1.36.16
V4844 -4G>T upstream_gene_variant ORF7a None 1.00e+0 B.1.36.16
V4864 37G>T missense_variant ORF7a A13S 1.00e+0 B.1.36.16
V4895 121G>T stop_gained ORF7a E41* 1.00e+0 B.1.36.16
V4932 211G>T missense_variant ORF7a V71L 1.00e+0 B.1.36.16
V4937 220G>T missense_variant ORF7a V74F 1.00e+0 B.1.36.16
V4943 233G>T missense_variant ORF7a R78L 1.00e+0 B.1.36.16
V5056 127G>T missense_variant ORF7b A43S 1.00e+0 B.1.36.16
V5061 -4G>T upstream_gene_variant ORF8 None 1.00e+0 B.1.36.16
V511 1420G>T missense_variant ORF1ab_pp1a A474S 1.00e+0 B.1.36.16
V5116 116T>C missense_variant ORF8 I39T 7.07e-1 B.1.36.16
V5144 184G>T missense_variant ORF8 V62L 8.16e-1 B.1.36.16
V5173 223G>T missense_variant ORF8 D75Y 1.00e+0 B.1.36.16
V5176 229G>T missense_variant ORF8 G77C 1.00e+0 B.1.36.16
V5196 302G>T missense_variant ORF8 R101L 1.00e+0 B.1.36.16
V5209 340G>T missense_variant ORF8 V114F 1.00e+0 B.1.36.16
V5212 344G>T missense_variant ORF8 R115L 1.00e+0 B.1.36.16
V5234 -12G>T upstream_gene_variant N None 1.00e+0 B.1.36.16
V5266 29G>T missense_variant N R10L 1.00e+0 B.1.36.16
V5277 41G>T missense_variant N R14L 1.00e+0 B.1.36.16
V5324 107G>T missense_variant N R36L 1.00e+0 B.1.36.16
V5331 119G>T missense_variant N R40L 1.00e+0 B.1.36.16
V5333 122G>T missense_variant N R41L 1.00e+0 B.1.36.16
V5337 163G>T missense_variant N A55S 1.00e+0 B.1.36.16
V5345 203G>T missense_variant N R68L 1.00e+0 B.1.36.16
V5349 214G>T missense_variant N V72F 1.00e+0 B.1.36.16
V5355 263G>T missense_variant N R88L 1.00e+0 B.1.36.16
V5359 278G>T missense_variant N R93L 1.00e+0 B.1.36.16
V5361 284G>T missense_variant N R95L 1.00e+0 B.1.36.16
V5364 295G>T missense_variant N G99C 1.00e+0 B.1.36.16
V5379 385G>T missense_variant N G129C 1.00e+0 B.1.36.16
V5395 446G>T missense_variant N R149L 1.00e+0 B.1.36.16
V5404 472G>T missense_variant N V158L 1.00e+0 B.1.36.16
V5414 517G>T missense_variant N A173S 1.00e+0 B.1.36.16
V5419 535G>T missense_variant N G179C 1.00e+0 B.1.36.16
V5429 554G>T missense_variant N R185L 1.00e+0 B.1.36.16
V5434 566G>T missense_variant N R189L 1.00e+0 B.1.36.16
V5437 572G>T missense_variant N R191L 1.00e+0 B.1.36.16
V5496 643G>T missense_variant N G215C 1.00e+0 B.1.36.16
V5536 776G>T missense_variant N R259L 1.00e+0 B.1.36.16
V5537 785G>T missense_variant N R262L 1.00e+0 B.1.36.16
V554 1625G>T missense_variant ORF1ab_pp1a R542L 1.00e+0 B.1.36.16
V5546 823G>T missense_variant N G275C 1.00e+0 B.1.36.16
V5547 830G>T missense_variant N R277L 1.00e+0 B.1.36.16
V556 1634G>T missense_variant ORF1ab_pp1a R545L 1.00e+0 B.1.36.16
V5565 931G>T missense_variant N A311S 1.00e+0 B.1.36.16
V5566 946G>T stop_gained N G316* 1.00e+0 B.1.36.16
V5570 956G>T missense_variant N R319L 1.00e+0 B.1.36.16
V5594 1075G>T missense_variant N A359S 1.00e+0 B.1.36.16
V563 1649G>T missense_variant ORF1ab_pp1a R550L 1.00e+0 B.1.36.16
V5688 16G>T missense_variant ORF10 V6F 7.07e-1 B.1.36.16
V5690 22G>T missense_variant ORF10 A8S 7.07e-1 B.1.36.16
V5708 71G>T missense_variant ORF10 R24L 7.07e-1 B.1.36.16
V574 1679G>T missense_variant ORF1ab_pp1a R560L 1.00e+0 B.1.36.16
V576 1682T>C missense_variant ORF1ab_pp1a V561A 6.31e-1 B.1.36.16
V5762 *4350G>T downstream_gene_variant S None 7.07e-1 B.1.36.16
V5781 *4360G>T downstream_gene_variant S None 7.07e-1 B.1.36.16
V581 1696G>T missense_variant ORF1ab_pp1a A566S 1.00e+0 B.1.36.16
V5875 222G>T synonymous_variant ORF1ab_pp1a S74S 1.00e+0 B.1.36.16
V5970 726G>T synonymous_variant ORF1ab_pp1a T242T 1.00e+0 B.1.36.16
V5998 921G>T synonymous_variant ORF1ab_pp1a A307A 1.00e+0 B.1.36.16
V6010 999G>T synonymous_variant ORF1ab_pp1a T333T 1.00e+0 B.1.36.16
V61 -68G>T upstream_gene_variant ORF1ab_pp1a None 1.00e+0 B.1.36.16
V6121 1830G>T synonymous_variant ORF1ab_pp1a S610S 1.00e+0 B.1.36.16
V6165 2133G>T synonymous_variant ORF1ab_pp1a T711T 1.00e+0 B.1.36.16
V631 1879G>T missense_variant ORF1ab_pp1a V627F 1.00e+0 B.1.36.16
V6413 3942G>T synonymous_variant ORF1ab_pp1a A1314A 1.00e+0 B.1.36.16
V6420 3990G>T synonymous_variant ORF1ab_pp1a P1330P 1.00e+0 B.1.36.16
V643 1933G>T missense_variant ORF1ab_pp1a G645C 1.00e+0 B.1.36.16
V6481 4455G>T synonymous_variant ORF1ab_pp1a A1485A 8.16e-1 B.1.36.16
V6521 4743G>T synonymous_variant ORF1ab_pp1a T1581T 1.00e+0 B.1.36.16
V657 1981G>T missense_variant ORF1ab_pp1a G661C 1.00e+0 B.1.36.16
V6610 5364G>T synonymous_variant ORF1ab_pp1a T1788T 8.16e-1 B.1.36.16
V6634 5592G>T synonymous_variant ORF1ab_pp1a T1864T 1.00e+0 B.1.36.16
V6686 6006G>T synonymous_variant ORF1ab_pp1a T2002T 1.00e+0 B.1.36.16
V6690 6045C>T synonymous_variant ORF1ab_pp1a S2015S 7.07e-1 B.1.36.16
V6695 6072G>T synonymous_variant ORF1ab_pp1a S2024S 1.00e+0 B.1.36.16
V6704 6099G>T synonymous_variant ORF1ab_pp1a A2033A 1.00e+0 B.1.36.16
V6765 6585G>T synonymous_variant ORF1ab_pp1a P2195P 7.07e-1 B.1.36.16
V6830 7128G>T synonymous_variant ORF1ab_pp1a P2376P 8.16e-1 B.1.36.16
V6859 7410G>T synonymous_variant ORF1ab_pp1a A2470A 1.00e+0 B.1.36.16
V6890 7671G>T synonymous_variant ORF1ab_pp1a A2557A 1.00e+0 B.1.36.16
V69 -62G>T upstream_gene_variant ORF1ab_pp1a None 1.00e+0 B.1.36.16
V6900 7752G>T synonymous_variant ORF1ab_pp1a A2584A 1.00e+0 B.1.36.16
V6908 7791G>T synonymous_variant ORF1ab_pp1a T2597T 1.00e+0 B.1.36.16
V6950 8088G>T synonymous_variant ORF1ab_pp1a A2696A 1.00e+0 B.1.36.16
V6952 8103G>T synonymous_variant ORF1ab_pp1a A2701A 1.00e+0 B.1.36.16
V7125 9537G>T synonymous_variant ORF1ab_pp1a A3179A 8.16e-1 B.1.36.16
V7140 9606G>T synonymous_variant ORF1ab_pp1a T3202T 1.00e+0 B.1.36.16
V72 -58G>T upstream_gene_variant ORF1ab_pp1a None 1.00e+0 B.1.36.16
V7246 10377G>T synonymous_variant ORF1ab_pp1a T3459T 1.00e+0 B.1.36.16
V747 2359G>T missense_variant ORF1ab_pp1a G787W 1.00e+0 B.1.36.16
V7480 12249G>T synonymous_variant ORF1ab_pp1a T4083T 1.00e+0 B.1.36.16
V7502 12504G>T synonymous_variant ORF1ab_pp1a A4168A 1.00e+0 B.1.36.16
V752 2374G>T stop_gained ORF1ab_pp1a E792* 1.00e+0 B.1.36.16
V7567 12975G>T synonymous_variant ORF1ab_pp1a S4325S 1.00e+0 B.1.36.16
V7602 13194G>T synonymous_variant ORF1ab_pp1a S4398S 8.16e-1 B.1.36.16
V7604 13239G>T synonymous_variant ORF1ab_pp1ab P4413P 1.00e+0 B.1.36.16
V762 2452G>T missense_variant ORF1ab_pp1a G818C 1.00e+0 B.1.36.16
V7677 13854G>T synonymous_variant ORF1ab_pp1ab T4618T 1.00e+0 B.1.36.16
V7699 14004G>T synonymous_variant ORF1ab_pp1ab T4668T 1.00e+0 B.1.36.16
V7751 14358G>T synonymous_variant ORF1ab_pp1ab T4786T 1.00e+0 B.1.36.16
V782 2593G>T missense_variant ORF1ab_pp1a G865C 1.00e+0 B.1.36.16
V7846 15108G>T synonymous_variant ORF1ab_pp1ab T5036T 1.00e+0 B.1.36.16
V7869 15279G>T synonymous_variant ORF1ab_pp1ab T5093T 1.00e+0 B.1.36.16
V787 2614G>T missense_variant ORF1ab_pp1a A872S 1.00e+0 B.1.36.16
V7951 15957G>T synonymous_variant ORF1ab_pp1ab P5319P 1.00e+0 B.1.36.16
V7974 16113G>T synonymous_variant ORF1ab_pp1ab P5371P 1.00e+0 B.1.36.16
V8011 16383G>T synonymous_variant ORF1ab_pp1ab T5461T 1.00e+0 B.1.36.16
V81 -47G>T upstream_gene_variant ORF1ab_pp1a None 1.00e+0 B.1.36.16
V8101 17070G>T synonymous_variant ORF1ab_pp1ab T5690T 1.00e+0 B.1.36.16
V8145 17415G>T synonymous_variant ORF1ab_pp1ab T5805T 1.00e+0 B.1.36.16
V8252 18198G>T synonymous_variant ORF1ab_pp1ab P6066P 1.00e+0 B.1.36.16
V8328 18696G>T synonymous_variant ORF1ab_pp1ab A6232A 1.00e+0 B.1.36.16
V8388 19191G>T synonymous_variant ORF1ab_pp1ab T6397T 1.00e+0 B.1.36.16
V8446 19698G>T synonymous_variant ORF1ab_pp1ab T6566T 1.00e+0 B.1.36.16
V8502 20205G>T synonymous_variant ORF1ab_pp1ab A6735A 1.00e+0 B.1.36.16
V8519 20406G>T synonymous_variant ORF1ab_pp1ab A6802A 1.00e+0 B.1.36.16
V8521 20415G>T synonymous_variant ORF1ab_pp1ab P6805P 1.00e+0 B.1.36.16
V8549 20673G>T synonymous_variant ORF1ab_pp1ab T6891T 1.00e+0 B.1.36.16
V8592 20991G>T synonymous_variant ORF1ab_pp1ab A6997A 8.16e-1 B.1.36.16
V8678 336G>T synonymous_variant S S112S 1.00e+0 B.1.36.16
V8698 489G>T synonymous_variant S A163A 1.00e+0 B.1.36.16
V8711 624G>T synonymous_variant S T208T 1.00e+0 B.1.36.16
V8721 663G>T synonymous_variant S S221S 8.16e-1 B.1.36.16
V8749 906G>T synonymous_variant S T302T 1.00e+0 B.1.36.16
V882 2977G>T missense_variant ORF1ab_pp1a G993C 1.00e+0 B.1.36.16
V8973 2637G>T synonymous_variant S A879A 1.00e+0 B.1.36.16
V9003 2883G>T synonymous_variant S T961T 1.00e+0 B.1.36.16
V9154 108G>T synonymous_variant ORF3a P36P 1.00e+0 B.1.36.16
V9253 801G>T synonymous_variant ORF3a P267P 1.00e+0 B.1.36.16
V9254 804G>T synonymous_variant ORF3a T268T 1.00e+0 B.1.36.16
V9256 807G>T synonymous_variant ORF3a T269T 1.00e+0 B.1.36.16
V9262 18G>T synonymous_variant E S6S 1.00e+0 B.1.36.16
V9274 108G>T synonymous_variant E A36A 1.00e+0 B.1.36.16
V9330 312G>T synonymous_variant M A104A 1.00e+0 B.1.36.16
V9332 318G>T synonymous_variant M T106T 1.00e+0 B.1.36.16
V9351 396G>T synonymous_variant M P132P 8.16e-1 B.1.36.16
V9376 525G>T synonymous_variant M T175T 1.00e+0 B.1.36.16
V9381 552G>T synonymous_variant M S184S 1.00e+0 B.1.36.16
V9480 315G>T synonymous_variant ORF7a A105A 1.00e+0 B.1.36.16
V9550 309G>T synonymous_variant ORF8 S103S 1.00e+0 B.1.36.16
V9582 105G>T synonymous_variant N A35A 8.16e-1 B.1.36.16
V9596 150G>T synonymous_variant N A50A 1.00e+0 B.1.36.16
V9744 906G>T synonymous_variant N P302P 1.00e+0 B.1.36.16
V9753 939G>T synonymous_variant N A313A 1.00e+0 B.1.36.16
V9758 954G>T synonymous_variant N S318S 1.00e+0 B.1.36.16
V9764 981G>T synonymous_variant N S327S 1.00e+0 B.1.36.16
V9766 987G>T synonymous_variant N T329T 8.16e-1 B.1.36.16
V978 3319G>T stop_gained ORF1ab_pp1a G1107* 1.00e+0 B.1.36.16
V9797 1149G>T synonymous_variant N P383P 7.07e-1 B.1.36.16
V9824 30G>T synonymous_variant ORF10 P10P 7.07e-1 B.1.36.16
V9825 36G>T synonymous_variant ORF10 T12T 7.07e-1 B.1.36.16
V988 3355G>T missense_variant ORF1ab_pp1a G1119C 7.07e-1 B.1.36.16
V1002 3424G>T stop_gained ORF1ab_pp1a E1142* 1.00e+0 B.1.36
V1026 3509G>T missense_variant ORF1ab_pp1a R1170L 1.00e+0 B.1.36
V103 -20G>T upstream_gene_variant ORF1ab_pp1a None 1.00e+0 B.1.36
V1047 3610G>T missense_variant ORF1ab_pp1a A1204S 1.00e+0 B.1.36
V111 -10G>T upstream_gene_variant ORF1ab_pp1a None 1.00e+0 B.1.36
V1133 4127G>T missense_variant ORF1ab_pp1a R1376L 7.07e-1 B.1.36
V1139 4157G>T missense_variant ORF1ab_pp1a R1386L 1.00e+0 B.1.36
V1146 4211G>T missense_variant ORF1ab_pp1a R1404L 1.00e+0 B.1.36
V1159 4318G>T missense_variant ORF1ab_pp1a D1440Y 1.00e+0 B.1.36
V1164 4391G>T missense_variant ORF1ab_pp1a R1464L 1.00e+0 B.1.36
V118 28G>T stop_gained ORF1ab_pp1a E10* 1.00e+0 B.1.36
V120 40G>T missense_variant ORF1ab_pp1a V14F 1.00e+0 B.1.36
V124 71G>T missense_variant ORF1ab_pp1a R24L 1.00e+0 B.1.36
V125 73G>T missense_variant ORF1ab_pp1a D25Y 1.00e+0 B.1.36
V126 76G>T missense_variant ORF1ab_pp1a V26L 1.00e+0 B.1.36
V1298 5248G>T missense_variant ORF1ab_pp1a V1750L 1.00e+0 B.1.36
V130 82G>T missense_variant ORF1ab_pp1a V28L 1.00e+0 B.1.36
V132 86G>T missense_variant ORF1ab_pp1a R29L 1.00e+0 B.1.36
V1345 5548G>T missense_variant ORF1ab_pp1a G1850C 1.00e+0 B.1.36
V1374 5767G>T missense_variant ORF1ab_pp1a A1923S 1.00e+0 B.1.36
V139 103G>T missense_variant ORF1ab_pp1a V35L 1.00e+0 B.1.36
V1409 6032G>T missense_variant ORF1ab_pp1a R2011L 1.00e+0 B.1.36
V1432 6097G>T missense_variant ORF1ab_pp1a A2033S 1.00e+0 B.1.36
V1439 6124G>T stop_gained ORF1ab_pp1a E2042* 1.00e+0 B.1.36
V146 128G>T missense_variant ORF1ab_pp1a R43L 1.00e+0 B.1.36
V1464 6208G>T stop_gained ORF1ab_pp1a E2070* 1.00e+0 B.1.36
V1544 6476G>T missense_variant ORF1ab_pp1a R2159L 1.00e+0 B.1.36
V1546 6488G>T missense_variant ORF1ab_pp1a R2163L 1.00e+0 B.1.36
V1578 6742G>T missense_variant ORF1ab_pp1a A2248S 1.00e+0 B.1.36
V162 178G>T missense_variant ORF1ab_pp1a V60F 1.00e+0 B.1.36
V1644 7207G>T missense_variant ORF1ab_pp1a G2403C 1.00e+0 B.1.36
V1649 7244G>T missense_variant ORF1ab_pp1a R2415L 1.00e+0 B.1.36
V1651 7264G>T stop_gained ORF1ab_pp1a E2422* 1.00e+0 B.1.36
V1662 7471G>T missense_variant ORF1ab_pp1a V2491F 1.00e+0 B.1.36
V168 218G>T missense_variant ORF1ab_pp1a R73L 1.00e+0 B.1.36
V1712 7783G>T missense_variant ORF1ab_pp1a V2595F 1.00e+0 B.1.36
V1716 7810G>T missense_variant ORF1ab_pp1a V2604L 1.00e+0 B.1.36
V1743 7913G>T missense_variant ORF1ab_pp1a R2638L 1.00e+0 B.1.36
V175 230G>T missense_variant ORF1ab_pp1a R77L 1.00e+0 B.1.36
V1753 8002G>T missense_variant ORF1ab_pp1a D2668Y 1.00e+0 B.1.36
V1760 8057G>T missense_variant ORF1ab_pp1a R2686L 1.00e+0 B.1.36
V1766 8090G>T missense_variant ORF1ab_pp1a R2697L 1.00e+0 B.1.36
V1774 8143G>T missense_variant ORF1ab_pp1a V2715F 1.00e+0 B.1.36
V1777 8177G>T missense_variant ORF1ab_pp1a R2726L 1.00e+0 B.1.36
V1778 8189G>T missense_variant ORF1ab_pp1a R2730L 1.00e+0 B.1.36
V1819 8453G>T missense_variant ORF1ab_pp1a R2818L 1.00e+0 B.1.36
V1829 8522G>T missense_variant ORF1ab_pp1a R2841L 1.00e+0 B.1.36
V1846 8596G>T missense_variant ORF1ab_pp1a V2866L 1.00e+0 B.1.36
V1857 8624G>T missense_variant ORF1ab_pp1a R2875L 1.00e+0 B.1.36
V1883 8846G>T missense_variant ORF1ab_pp1a R2949L 1.00e+0 B.1.36
V1886 8858G>T missense_variant ORF1ab_pp1a R2953L 1.00e+0 B.1.36
V1900 8959G>T missense_variant ORF1ab_pp1a G2987C 1.00e+0 B.1.36
V1961 9491G>T missense_variant ORF1ab_pp1a R3164L 1.00e+0 B.1.36
V1964 9581G>T missense_variant ORF1ab_pp1a R3194L 1.00e+0 B.1.36
V1979 9703G>T missense_variant ORF1ab_pp1a A3235S 1.00e+0 B.1.36
V1993 9874G>T missense_variant ORF1ab_pp1a G3292C 1.00e+0 B.1.36
V1997 9892G>T missense_variant ORF1ab_pp1a V3298L 1.00e+0 B.1.36
V2005 9968G>T missense_variant ORF1ab_pp1a R3323L 7.07e-1 B.1.36
V2030 10103G>T missense_variant ORF1ab_pp1a R3368L 1.00e+0 B.1.36
V2055 10417G>T missense_variant ORF1ab_pp1a A3473S 1.00e+0 B.1.36
V2060 10454G>T missense_variant ORF1ab_pp1a R3485L 1.00e+0 B.1.36
V207 277G>T stop_gained ORF1ab_pp1a E93* 1.00e+0 B.1.36
V2079 10570G>T missense_variant ORF1ab_pp1a V3524F 1.00e+0 B.1.36
V2087 10625G>T missense_variant ORF1ab_pp1a R3542L 1.00e+0 B.1.36
V212 292G>T missense_variant ORF1ab_pp1a G98C 1.00e+0 B.1.36
V215 296G>T missense_variant ORF1ab_pp1a R99L 1.00e+0 B.1.36
V2151 10985G>T missense_variant ORF1ab_pp1a R3662L 1.00e+0 B.1.36
V2238 11405G>T missense_variant ORF1ab_pp1a R3802L 1.00e+0 B.1.36
V228 337G>T stop_gained ORF1ab_pp1a E113* 1.00e+0 B.1.36
V2313 11996G>T missense_variant ORF1ab_pp1a R3999L 1.00e+0 B.1.36
V2358 12449G>T missense_variant ORF1ab_pp1a R4150L 1.00e+0 B.1.36
V2362 12469G>T missense_variant ORF1ab_pp1a G4157C 1.00e+0 B.1.36
V2386 12559G>T missense_variant ORF1ab_pp1a D4187Y 1.00e+0 B.1.36
V239 356G>T missense_variant ORF1ab_pp1a R119L 1.00e+0 B.1.36
V2406 12752G>T missense_variant ORF1ab_pp1a R4251L 1.00e+0 B.1.36
V2424 12992G>T missense_variant ORF1ab_pp1a R4331L 1.00e+0 B.1.36
V243 371G>T missense_variant ORF1ab_pp1a R124L 1.00e+0 B.1.36
V245 379G>T missense_variant ORF1ab_pp1a G127C 1.00e+0 B.1.36
V2452 13204G>T missense_variant ORF1ab_pp1a G4402W 1.00e+0 B.1.36
V2453 13213G>T missense_variant ORF1ab_pp1ab G4405C 1.00e+0 B.1.36
V2456 13229G>T missense_variant ORF1ab_pp1ab R4410L 1.00e+0 B.1.36
V2459 13243G>T missense_variant ORF1ab_pp1ab G4415C 1.00e+0 B.1.36
V2463 13267G>T missense_variant ORF1ab_pp1ab V4423L 1.00e+0 B.1.36
V2470 13340G>T missense_variant ORF1ab_pp1ab R4447L 1.00e+0 B.1.36
V2496 13498G>T missense_variant ORF1ab_pp1ab G4500C 1.00e+0 B.1.36
V2500 13523G>T missense_variant ORF1ab_pp1ab R4508L 1.00e+0 B.1.36
V2503 13529G>T missense_variant ORF1ab_pp1ab R4510L 1.00e+0 B.1.36
V2507 13558G>T missense_variant ORF1ab_pp1ab V4520F 1.00e+0 B.1.36
V251 409G>T missense_variant ORF1ab_pp1a G137C 1.00e+0 B.1.36
V2528 13694G>T missense_variant ORF1ab_pp1ab R4565L 1.00e+0 B.1.36
V2529 13696G>T missense_variant ORF1ab_pp1ab V4566L 1.00e+0 B.1.36
V2532 13702G>T missense_variant ORF1ab_pp1ab A4568S 1.00e+0 B.1.36
V2534 13718G>T missense_variant ORF1ab_pp1ab R4573L 1.00e+0 B.1.36
V2535 13724G>T missense_variant ORF1ab_pp1ab R4575L 1.00e+0 B.1.36
V2543 13834G>T missense_variant ORF1ab_pp1ab G4612C 1.00e+0 B.1.36
V255 412G>T missense_variant ORF1ab_pp1a A138S 1.00e+0 B.1.36
V257 415G>T missense_variant ORF1ab_pp1a D139Y 1.00e+0 B.1.36
V2584 14030G>T missense_variant ORF1ab_pp1ab R4677L 1.00e+0 B.1.36
V2612 14320G>T missense_variant ORF1ab_pp1ab A4774S 1.00e+0 B.1.36
V2615 14351G>T missense_variant ORF1ab_pp1ab R4784L 1.00e+0 B.1.36
V2620 14413G>T missense_variant ORF1ab_pp1ab G4805C 1.00e+0 B.1.36
V2631 14530G>T missense_variant ORF1ab_pp1ab D4844Y 1.00e+0 B.1.36
V2632 14546G>T missense_variant ORF1ab_pp1ab R4849L 1.00e+0 B.1.36
V2641 14659G>T missense_variant ORF1ab_pp1ab V4887F 1.00e+0 B.1.36
V2654 14774G>T missense_variant ORF1ab_pp1ab R4925L 1.00e+0 B.1.36
V2656 14840G>T missense_variant ORF1ab_pp1ab R4947L 1.00e+0 B.1.36
V2657 14845G>T missense_variant ORF1ab_pp1ab V4949L 1.00e+0 B.1.36
V2680 15095G>T missense_variant ORF1ab_pp1ab R5032L 1.00e+0 B.1.36
V2687 15128G>T missense_variant ORF1ab_pp1ab R5043L 1.00e+0 B.1.36
V269 439G>T missense_variant ORF1ab_pp1a D147Y 1.00e+0 B.1.36
V2695 15187G>T missense_variant ORF1ab_pp1ab G5063C 1.00e+0 B.1.36
V270 442G>T stop_gained ORF1ab_pp1a E148* 1.00e+0 B.1.36
V2702 15325G>T missense_variant ORF1ab_pp1ab D5109Y 1.00e+0 B.1.36
V2706 15338G>T missense_variant ORF1ab_pp1ab R5113L 1.00e+0 B.1.36
V2715 15415G>T missense_variant ORF1ab_pp1ab A5139S 1.00e+0 B.1.36
V2716 15425G>T missense_variant ORF1ab_pp1ab R5142L 1.00e+0 B.1.36
V2746 15749G>T missense_variant ORF1ab_pp1ab R5250L 1.00e+0 B.1.36
V2747 15754G>T missense_variant ORF1ab_pp1ab V5252L 1.00e+0 B.1.36
V2772 16034G>T missense_variant ORF1ab_pp1ab R5345L 1.00e+0 B.1.36
V2796 16273G>T missense_variant ORF1ab_pp1ab D5425Y 7.07e-1 B.1.36
V2812 16436G>T missense_variant ORF1ab_pp1ab R5479L 1.00e+0 B.1.36
V2822 16505G>T missense_variant ORF1ab_pp1ab R5502L 1.00e+0 B.1.36
V2823 16529G>T missense_variant ORF1ab_pp1ab R5510L 1.00e+0 B.1.36
V2834 16607G>T missense_variant ORF1ab_pp1ab R5536L 1.00e+0 B.1.36
V285 512G>T missense_variant ORF1ab_pp1a R171L 1.00e+0 B.1.36
V287 524G>T missense_variant ORF1ab_pp1a R175L 1.00e+0 B.1.36
V2880 16880G>T missense_variant ORF1ab_pp1ab R5627L 1.00e+0 B.1.36
V2884 16909G>T missense_variant ORF1ab_pp1ab A5637S 1.00e+0 B.1.36
V289 535G>T stop_gained ORF1ab_pp1a G179* 1.00e+0 B.1.36
V2894 16982G>T missense_variant ORF1ab_pp1ab R5661L 1.00e+0 B.1.36
V2896 16988G>T missense_variant ORF1ab_pp1ab R5663L 1.00e+0 B.1.36
V2919 17173G>T missense_variant ORF1ab_pp1ab D5725Y 1.00e+0 B.1.36
V2923 17198G>T missense_variant ORF1ab_pp1ab R5733L 1.00e+0 B.1.36
V2933 17287G>T stop_gained ORF1ab_pp1ab G5763* 1.00e+0 B.1.36
V2935 17297G>T missense_variant ORF1ab_pp1ab R5766L 1.00e+0 B.1.36
V2936 17300G>T missense_variant ORF1ab_pp1ab R5767L 1.00e+0 B.1.36
V2956 17455G>T missense_variant ORF1ab_pp1ab V5819L 1.00e+0 B.1.36
V296 551G>T missense_variant ORF1ab_pp1a R184L 1.00e+0 B.1.36
V2960 17477G>T missense_variant ORF1ab_pp1ab R5826L 1.00e+0 B.1.36
V297 559G>T missense_variant ORF1ab_pp1a D187Y 1.00e+0 B.1.36
V2992 17753G>T missense_variant ORF1ab_pp1ab R5918L 1.00e+0 B.1.36
V3039 18002G>T missense_variant ORF1ab_pp1ab R6001L 1.00e+0 B.1.36
V3040 18004G>T stop_gained ORF1ab_pp1ab E6002* 1.00e+0 B.1.36
V3045 18026G>T missense_variant ORF1ab_pp1ab R6009L 1.00e+0 B.1.36
V3048 18043G>T missense_variant ORF1ab_pp1ab D6015Y 1.00e+0 B.1.36
V3049 18049G>T stop_gained ORF1ab_pp1ab E6017* 1.00e+0 B.1.36
V3085 18263G>T missense_variant ORF1ab_pp1ab R6088L 1.00e+0 B.1.36
V3102 18389G>T missense_variant ORF1ab_pp1ab R6130L 1.00e+0 B.1.36
V311 620G>T missense_variant ORF1ab_pp1a R207L 1.00e+0 B.1.36
V3115 18481G>T missense_variant ORF1ab_pp1ab V6161F 1.00e+0 B.1.36
V3130 18625G>T stop_gained ORF1ab_pp1ab E6209* 1.00e+0 B.1.36
V3135 18641G>T missense_variant ORF1ab_pp1ab R6214L 1.00e+0 B.1.36
V3187 18943G>T missense_variant ORF1ab_pp1ab D6315Y 1.00e+0 B.1.36
V321 649G>T stop_gained ORF1ab_pp1a E217* 1.00e+0 B.1.36
V3216 19202G>T missense_variant ORF1ab_pp1ab R6401L 1.00e+0 B.1.36
V3254 19538G>T missense_variant ORF1ab_pp1ab R6513L 1.00e+0 B.1.36
V332 695G>T missense_variant ORF1ab_pp1a R232L 1.00e+0 B.1.36
V3331 20027G>T missense_variant ORF1ab_pp1ab R6676L 1.00e+0 B.1.36
V3334 20053G>T stop_gained ORF1ab_pp1ab E6685* 1.00e+0 B.1.36
V3338 20062G>T missense_variant ORF1ab_pp1ab V6688F 1.00e+0 B.1.36
V3345 20126G>T missense_variant ORF1ab_pp1ab R6709L 1.00e+0 B.1.36
V336 731G>T missense_variant ORF1ab_pp1a R244L 1.00e+0 B.1.36
V3415 20527G>T missense_variant ORF1ab_pp1ab A6843S 1.00e+0 B.1.36
V3428 20683G>T missense_variant ORF1ab_pp1ab D6895Y 1.00e+0 B.1.36
V3444 20791G>T missense_variant ORF1ab_pp1ab D6931Y 1.00e+0 B.1.36
V3462 20893G>T missense_variant ORF1ab_pp1ab V6965L 7.07e-1 B.1.36
V3487 21041G>T missense_variant ORF1ab_pp1ab R7014L 1.00e+0 B.1.36
V3488 21043G>T stop_gained ORF1ab_pp1ab E7015* 1.00e+0 B.1.36
V3517 -5G>T upstream_gene_variant S None 1.00e+0 B.1.36
V3562 101G>T missense_variant S R34L 1.00e+0 B.1.36
V3621 367G>T missense_variant S A123S 1.00e+0 B.1.36
V370 902G>T missense_variant ORF1ab_pp1a R301L 1.00e+0 B.1.36
V3822 1030G>T missense_variant S A344S 1.00e+0 B.1.36
V3857 1231G>T missense_variant S A411S 1.00e+0 B.1.36
V3959 1730G>T missense_variant S R577L 1.00e+0 B.1.36
V396 1003G>T missense_variant ORF1ab_pp1a D335Y 1.00e+0 B.1.36
V3985 1901G>T missense_variant S R634L 1.00e+0 B.1.36
V3991 1937G>T missense_variant S R646L 1.00e+0 B.1.36
V4005 2014G>T missense_variant S A672S 1.00e+0 B.1.36
V401 1024G>T stop_gained ORF1ab_pp1a E342* 1.00e+0 B.1.36
V4025 2045G>T missense_variant S R682L 1.00e+0 B.1.36
V4026 2048G>T missense_variant S R683L 1.00e+0 B.1.36
V4029 2054G>T missense_variant S R685L 1.00e+0 B.1.36
V4065 2294G>T missense_variant S R765L 7.07e-1 B.1.36
V4109 2569G>T missense_variant S G857C 1.00e+0 B.1.36
V4150 2948G>T missense_variant S R983L 1.00e+0 B.1.36
V4235 3554G>T missense_variant S R1185L 7.07e-1 B.1.36
V4244 3595G>T missense_variant S D1199Y 1.00e+0 B.1.36
V4302 -6G>T upstream_gene_variant ORF3a None 1.00e+0 B.1.36
V437 1156G>T stop_gained ORF1ab_pp1a E386* 1.00e+0 B.1.36
V4379 130G>T stop_gained ORF3a G44* 1.00e+0 B.1.36
V4391 148G>T missense_variant ORF3a V50F 1.00e+0 B.1.36
V453 1205G>T missense_variant ORF1ab_pp1a R402L 1.00e+0 B.1.36
V4614 751G>T missense_variant ORF3a G251C 1.00e+0 B.1.36
V464 1277G>T missense_variant ORF1ab_pp1a R426L 1.00e+0 B.1.36
V4652 817G>T missense_variant ORF3a V273L 1.00e+0 B.1.36
V4672 70G>T missense_variant E V24L 1.00e+0 B.1.36
V4686 182G>T missense_variant E R61L 1.00e+0 B.1.36
V469 1285G>T missense_variant ORF1ab_pp1a A429S 7.07e-1 B.1.36
V4722 16G>T missense_variant M G6C 1.00e+0 B.1.36
V4757 232G>T missense_variant M G78C 1.00e+0 B.1.36
V4763 247G>T missense_variant M A83S 1.00e+0 B.1.36
V4772 320G>T missense_variant M R107L 1.00e+0 B.1.36
V4782 473G>T missense_variant M R158L 7.07e-1 B.1.36
V4784 521G>T missense_variant M R174L 1.00e+0 B.1.36
V4788 593G>T missense_variant M R198L 1.00e+0 B.1.36
V484 1330G>T stop_gained ORF1ab_pp1a E444* 1.00e+0 B.1.36
V4864 37G>T missense_variant ORF7a A13S 1.00e+0 B.1.36
V4895 121G>T stop_gained ORF7a E41* 1.00e+0 B.1.36
V4932 211G>T missense_variant ORF7a V71L 7.07e-1 B.1.36
V4937 220G>T missense_variant ORF7a V74F 1.00e+0 B.1.36
V4943 233G>T missense_variant ORF7a R78L 1.00e+0 B.1.36
V511 1420G>T missense_variant ORF1ab_pp1a A474S 1.00e+0 B.1.36
V5173 223G>T missense_variant ORF8 D75Y 1.00e+0 B.1.36
V5196 302G>T missense_variant ORF8 R101L 7.07e-1 B.1.36
V5209 340G>T missense_variant ORF8 V114F 7.07e-1 B.1.36
V5212 344G>T missense_variant ORF8 R115L 7.07e-1 B.1.36
V5234 -12G>T upstream_gene_variant N None 1.00e+0 B.1.36
V5266 29G>T missense_variant N R10L 1.00e+0 B.1.36
V5277 41G>T missense_variant N R14L 1.00e+0 B.1.36
V5324 107G>T missense_variant N R36L 1.00e+0 B.1.36
V5331 119G>T missense_variant N R40L 7.07e-1 B.1.36
V5333 122G>T missense_variant N R41L 1.00e+0 B.1.36
V5337 163G>T missense_variant N A55S 7.07e-1 B.1.36
V5349 214G>T missense_variant N V72F 1.00e+0 B.1.36
V5355 263G>T missense_variant N R88L 1.00e+0 B.1.36
V5359 278G>T missense_variant N R93L 1.00e+0 B.1.36
V5361 284G>T missense_variant N R95L 7.07e-1 B.1.36
V5364 295G>T missense_variant N G99C 1.00e+0 B.1.36
V5379 385G>T missense_variant N G129C 1.00e+0 B.1.36
V5395 446G>T missense_variant N R149L 1.00e+0 B.1.36
V5404 472G>T missense_variant N V158L 1.00e+0 B.1.36
V5414 517G>T missense_variant N A173S 1.00e+0 B.1.36
V5419 535G>T missense_variant N G179C 7.07e-1 B.1.36
V5429 554G>T missense_variant N R185L 1.00e+0 B.1.36
V5434 566G>T missense_variant N R189L 7.07e-1 B.1.36
V5437 572G>T missense_variant N R191L 1.00e+0 B.1.36
V5496 643G>T missense_variant N G215C 7.07e-1 B.1.36
V5536 776G>T missense_variant N R259L 1.00e+0 B.1.36
V5537 785G>T missense_variant N R262L 1.00e+0 B.1.36
V554 1625G>T missense_variant ORF1ab_pp1a R542L 7.07e-1 B.1.36
V5546 823G>T missense_variant N G275C 1.00e+0 B.1.36
V5547 830G>T missense_variant N R277L 1.00e+0 B.1.36
V556 1634G>T missense_variant ORF1ab_pp1a R545L 1.00e+0 B.1.36
V5565 931G>T missense_variant N A311S 1.00e+0 B.1.36
V5566 946G>T stop_gained N G316* 1.00e+0 B.1.36
V5570 956G>T missense_variant N R319L 1.00e+0 B.1.36
V563 1649G>T missense_variant ORF1ab_pp1a R550L 1.00e+0 B.1.36
V5688 16G>T missense_variant ORF10 V6F 1.00e+0 B.1.36
V5690 22G>T missense_variant ORF10 A8S 7.07e-1 B.1.36
V574 1679G>T missense_variant ORF1ab_pp1a R560L 1.00e+0 B.1.36
V581 1696G>T missense_variant ORF1ab_pp1a A566S 7.07e-1 B.1.36
V5875 222G>T synonymous_variant ORF1ab_pp1a S74S 7.07e-1 B.1.36
V5970 726G>T synonymous_variant ORF1ab_pp1a T242T 1.00e+0 B.1.36
V5998 921G>T synonymous_variant ORF1ab_pp1a A307A 7.07e-1 B.1.36
V6010 999G>T synonymous_variant ORF1ab_pp1a T333T 7.07e-1 B.1.36
V61 -68G>T upstream_gene_variant ORF1ab_pp1a None 1.00e+0 B.1.36
V6121 1830G>T synonymous_variant ORF1ab_pp1a S610S 1.00e+0 B.1.36
V6165 2133G>T synonymous_variant ORF1ab_pp1a T711T 7.07e-1 B.1.36
V643 1933G>T missense_variant ORF1ab_pp1a G645C 1.00e+0 B.1.36
V657 1981G>T missense_variant ORF1ab_pp1a G661C 7.07e-1 B.1.36
V6634 5592G>T synonymous_variant ORF1ab_pp1a T1864T 1.00e+0 B.1.36
V6704 6099G>T synonymous_variant ORF1ab_pp1a A2033A 1.00e+0 B.1.36
V6765 6585G>T synonymous_variant ORF1ab_pp1a P2195P 7.07e-1 B.1.36
V6908 7791G>T synonymous_variant ORF1ab_pp1a T2597T 1.00e+0 B.1.36
V6950 8088G>T synonymous_variant ORF1ab_pp1a A2696A 7.07e-1 B.1.36
V6952 8103G>T synonymous_variant ORF1ab_pp1a A2701A 1.00e+0 B.1.36
V7140 9606G>T synonymous_variant ORF1ab_pp1a T3202T 1.00e+0 B.1.36
V72 -58G>T upstream_gene_variant ORF1ab_pp1a None 1.00e+0 B.1.36
V747 2359G>T missense_variant ORF1ab_pp1a G787W 1.00e+0 B.1.36
V752 2374G>T stop_gained ORF1ab_pp1a E792* 1.00e+0 B.1.36
V7567 12975G>T synonymous_variant ORF1ab_pp1a S4325S 1.00e+0 B.1.36
V7604 13239G>T synonymous_variant ORF1ab_pp1ab P4413P 7.07e-1 B.1.36
V762 2452G>T missense_variant ORF1ab_pp1a G818C 1.00e+0 B.1.36
V7699 14004G>T synonymous_variant ORF1ab_pp1ab T4668T 7.07e-1 B.1.36
V7751 14358G>T synonymous_variant ORF1ab_pp1ab T4786T 1.00e+0 B.1.36
V782 2593G>T missense_variant ORF1ab_pp1a G865C 1.00e+0 B.1.36
V787 2614G>T missense_variant ORF1ab_pp1a A872S 1.00e+0 B.1.36
V7951 15957G>T synonymous_variant ORF1ab_pp1ab P5319P 7.07e-1 B.1.36
V8252 18198G>T synonymous_variant ORF1ab_pp1ab P6066P 1.00e+0 B.1.36
V8328 18696G>T synonymous_variant ORF1ab_pp1ab A6232A 1.00e+0 B.1.36
V8446 19698G>T synonymous_variant ORF1ab_pp1ab T6566T 7.07e-1 B.1.36
V8502 20205G>T synonymous_variant ORF1ab_pp1ab A6735A 1.00e+0 B.1.36
V8549 20673G>T synonymous_variant ORF1ab_pp1ab T6891T 1.00e+0 B.1.36
V8678 336G>T synonymous_variant S S112S 7.07e-1 B.1.36
V8711 624G>T synonymous_variant S T208T 7.07e-1 B.1.36
V882 2977G>T missense_variant ORF1ab_pp1a G993C 1.00e+0 B.1.36
V9003 2883G>T synonymous_variant S T961T 1.00e+0 B.1.36
V9253 801G>T synonymous_variant ORF3a P267P 1.00e+0 B.1.36
V9254 804G>T synonymous_variant ORF3a T268T 1.00e+0 B.1.36
V9262 18G>T synonymous_variant E S6S 1.00e+0 B.1.36
V9274 108G>T synonymous_variant E A36A 1.00e+0 B.1.36
V9381 552G>T synonymous_variant M S184S 1.00e+0 B.1.36
V9480 315G>T synonymous_variant ORF7a A105A 7.07e-1 B.1.36
V9550 309G>T synonymous_variant ORF8 S103S 1.00e+0 B.1.36
V9596 150G>T synonymous_variant N A50A 1.00e+0 B.1.36
V978 3319G>T stop_gained ORF1ab_pp1a G1107* 1.00e+0 B.1.36
V9825 36G>T synonymous_variant ORF10 T12T 7.07e-1 B.1.36
V988 3355G>T missense_variant ORF1ab_pp1a G1119C 7.07e-1 B.1.36
V1002 3424G>T stop_gained ORF1ab_pp1a E1142* 1.00e+0 BA.1.1.7
V1026 3509G>T missense_variant ORF1ab_pp1a R1170L 1.00e+0 BA.1.1.7
V103 -20G>T upstream_gene_variant ORF1ab_pp1a None 1.00e+0 BA.1.1.7
V1047 3610G>T missense_variant ORF1ab_pp1a A1204S 1.00e+0 BA.1.1.7
V11 -194G>T upstream_gene_variant ORF1ab_pp1a None 7.07e-1 BA.1.1.7
V111 -10G>T upstream_gene_variant ORF1ab_pp1a None 1.00e+0 BA.1.1.7
V1133 4127G>T missense_variant ORF1ab_pp1a R1376L 1.00e+0 BA.1.1.7
V1139 4157G>T missense_variant ORF1ab_pp1a R1386L 1.00e+0 BA.1.1.7
V1146 4211G>T missense_variant ORF1ab_pp1a R1404L 1.00e+0 BA.1.1.7
V1159 4318G>T missense_variant ORF1ab_pp1a D1440Y 1.00e+0 BA.1.1.7
V1164 4391G>T missense_variant ORF1ab_pp1a R1464L 8.16e-1 BA.1.1.7
V118 28G>T stop_gained ORF1ab_pp1a E10* 1.00e+0 BA.1.1.7
V120 40G>T missense_variant ORF1ab_pp1a V14F 1.00e+0 BA.1.1.7
V124 71G>T missense_variant ORF1ab_pp1a R24L 1.00e+0 BA.1.1.7
V125 73G>T missense_variant ORF1ab_pp1a D25Y 1.00e+0 BA.1.1.7
V1252 4883G>T missense_variant ORF1ab_pp1a R1628L 1.00e+0 BA.1.1.7
V126 76G>T missense_variant ORF1ab_pp1a V26L 1.00e+0 BA.1.1.7
V1298 5248G>T missense_variant ORF1ab_pp1a V1750L 1.00e+0 BA.1.1.7
V130 82G>T missense_variant ORF1ab_pp1a V28L 1.00e+0 BA.1.1.7
V132 86G>T missense_variant ORF1ab_pp1a R29L 1.00e+0 BA.1.1.7
V1345 5548G>T missense_variant ORF1ab_pp1a G1850C 1.00e+0 BA.1.1.7
V1374 5767G>T missense_variant ORF1ab_pp1a A1923S 1.00e+0 BA.1.1.7
V139 103G>T missense_variant ORF1ab_pp1a V35L 1.00e+0 BA.1.1.7
V1409 6032G>T missense_variant ORF1ab_pp1a R2011L 1.00e+0 BA.1.1.7
V1432 6097G>T missense_variant ORF1ab_pp1a A2033S 1.00e+0 BA.1.1.7
V1439 6124G>T stop_gained ORF1ab_pp1a E2042* 1.00e+0 BA.1.1.7
V1458 6181G>T missense_variant ORF1ab_pp1a V2061F 1.00e+0 BA.1.1.7
V146 128G>T missense_variant ORF1ab_pp1a R43L 1.00e+0 BA.1.1.7
V1464 6208G>T stop_gained ORF1ab_pp1a E2070* 1.00e+0 BA.1.1.7
V1544 6476G>T missense_variant ORF1ab_pp1a R2159L 1.00e+0 BA.1.1.7
V1546 6488G>T missense_variant ORF1ab_pp1a R2163L 1.00e+0 BA.1.1.7
V1565 6619G>T missense_variant ORF1ab_pp1a G2207C 1.00e+0 BA.1.1.7
V1578 6742G>T missense_variant ORF1ab_pp1a A2248S 1.00e+0 BA.1.1.7
V162 178G>T missense_variant ORF1ab_pp1a V60F 1.00e+0 BA.1.1.7
V1644 7207G>T missense_variant ORF1ab_pp1a G2403C 1.00e+0 BA.1.1.7
V1649 7244G>T missense_variant ORF1ab_pp1a R2415L 1.00e+0 BA.1.1.7
V1651 7264G>T stop_gained ORF1ab_pp1a E2422* 1.00e+0 BA.1.1.7
V1662 7471G>T missense_variant ORF1ab_pp1a V2491F 1.00e+0 BA.1.1.7
V168 218G>T missense_variant ORF1ab_pp1a R73L 1.00e+0 BA.1.1.7
V1712 7783G>T missense_variant ORF1ab_pp1a V2595F 1.00e+0 BA.1.1.7
V1716 7810G>T missense_variant ORF1ab_pp1a V2604L 1.00e+0 BA.1.1.7
V1743 7913G>T missense_variant ORF1ab_pp1a R2638L 1.00e+0 BA.1.1.7
V175 230G>T missense_variant ORF1ab_pp1a R77L 1.00e+0 BA.1.1.7
V1753 8002G>T missense_variant ORF1ab_pp1a D2668Y 1.00e+0 BA.1.1.7
V1760 8057G>T missense_variant ORF1ab_pp1a R2686L 1.00e+0 BA.1.1.7
V1766 8090G>T missense_variant ORF1ab_pp1a R2697L 1.00e+0 BA.1.1.7
V1774 8143G>T missense_variant ORF1ab_pp1a V2715F 1.00e+0 BA.1.1.7
V1777 8177G>T missense_variant ORF1ab_pp1a R2726L 1.00e+0 BA.1.1.7
V1778 8189G>T missense_variant ORF1ab_pp1a R2730L 1.00e+0 BA.1.1.7
V1819 8453G>T missense_variant ORF1ab_pp1a R2818L 1.00e+0 BA.1.1.7
V1829 8522G>T missense_variant ORF1ab_pp1a R2841L 1.00e+0 BA.1.1.7
V1846 8596G>T missense_variant ORF1ab_pp1a V2866L 1.00e+0 BA.1.1.7
V1857 8624G>T missense_variant ORF1ab_pp1a R2875L 1.00e+0 BA.1.1.7
V1883 8846G>T missense_variant ORF1ab_pp1a R2949L 1.00e+0 BA.1.1.7
V1886 8858G>T missense_variant ORF1ab_pp1a R2953L 1.00e+0 BA.1.1.7
V1900 8959G>T missense_variant ORF1ab_pp1a G2987C 1.00e+0 BA.1.1.7
V1961 9491G>T missense_variant ORF1ab_pp1a R3164L 1.00e+0 BA.1.1.7
V1964 9581G>T missense_variant ORF1ab_pp1a R3194L 1.00e+0 BA.1.1.7
V1979 9703G>T missense_variant ORF1ab_pp1a A3235S 1.00e+0 BA.1.1.7
V1993 9874G>T missense_variant ORF1ab_pp1a G3292C 1.00e+0 BA.1.1.7
V1997 9892G>T missense_variant ORF1ab_pp1a V3298L 1.00e+0 BA.1.1.7
V2005 9968G>T missense_variant ORF1ab_pp1a R3323L 1.00e+0 BA.1.1.7
V2030 10103G>T missense_variant ORF1ab_pp1a R3368L 1.00e+0 BA.1.1.7
V2055 10417G>T missense_variant ORF1ab_pp1a A3473S 1.00e+0 BA.1.1.7
V2060 10454G>T missense_variant ORF1ab_pp1a R3485L 1.00e+0 BA.1.1.7
V207 277G>T stop_gained ORF1ab_pp1a E93* 1.00e+0 BA.1.1.7
V2079 10570G>T missense_variant ORF1ab_pp1a V3524F 1.00e+0 BA.1.1.7
V2087 10625G>T missense_variant ORF1ab_pp1a R3542L 1.00e+0 BA.1.1.7
V21 -165G>T upstream_gene_variant ORF1ab_pp1a None 7.07e-1 BA.1.1.7
V212 292G>T missense_variant ORF1ab_pp1a G98C 1.00e+0 BA.1.1.7
V215 296G>T missense_variant ORF1ab_pp1a R99L 1.00e+0 BA.1.1.7
V2151 10985G>T missense_variant ORF1ab_pp1a R3662L 7.07e-1 BA.1.1.7
V2188 11152G>T missense_variant ORF1ab_pp1a V3718F 7.06e-1 BA.1.1.7
V2238 11405G>T missense_variant ORF1ab_pp1a R3802L 1.00e+0 BA.1.1.7
V228 337G>T stop_gained ORF1ab_pp1a E113* 1.00e+0 BA.1.1.7
V2310 11978G>T missense_variant ORF1ab_pp1a R3993L 1.00e+0 BA.1.1.7
V2313 11996G>T missense_variant ORF1ab_pp1a R3999L 1.00e+0 BA.1.1.7
V2358 12449G>T missense_variant ORF1ab_pp1a R4150L 1.00e+0 BA.1.1.7
V2362 12469G>T missense_variant ORF1ab_pp1a G4157C 1.00e+0 BA.1.1.7
V2386 12559G>T missense_variant ORF1ab_pp1a D4187Y 1.00e+0 BA.1.1.7
V239 356G>T missense_variant ORF1ab_pp1a R119L 1.00e+0 BA.1.1.7
V2406 12752G>T missense_variant ORF1ab_pp1a R4251L 1.00e+0 BA.1.1.7
V2424 12992G>T missense_variant ORF1ab_pp1a R4331L 1.00e+0 BA.1.1.7
V243 371G>T missense_variant ORF1ab_pp1a R124L 1.00e+0 BA.1.1.7
V2438 13114G>T missense_variant ORF1ab_pp1a V4372F 1.00e+0 BA.1.1.7
V2439 13120G>T missense_variant ORF1ab_pp1a G4374C 1.00e+0 BA.1.1.7
V2445 13160G>T missense_variant ORF1ab_pp1a R4387L 1.00e+0 BA.1.1.7
V2446 13162G>T stop_gained ORF1ab_pp1a E4388* 1.00e+0 BA.1.1.7
V245 379G>T missense_variant ORF1ab_pp1a G127C 1.00e+0 BA.1.1.7
V2452 13204G>T missense_variant ORF1ab_pp1a G4402W 1.00e+0 BA.1.1.7
V2453 13213G>T missense_variant ORF1ab_pp1ab G4405C 1.00e+0 BA.1.1.7
V2456 13229G>T missense_variant ORF1ab_pp1ab R4410L 1.00e+0 BA.1.1.7
V2459 13243G>T missense_variant ORF1ab_pp1ab G4415C 1.00e+0 BA.1.1.7
V2463 13267G>T missense_variant ORF1ab_pp1ab V4423L 1.00e+0 BA.1.1.7
V2470 13340G>T missense_variant ORF1ab_pp1ab R4447L 1.00e+0 BA.1.1.7
V2474 13357G>T stop_gained ORF1ab_pp1ab E4453* 1.00e+0 BA.1.1.7
V2496 13498G>T missense_variant ORF1ab_pp1ab G4500C 1.00e+0 BA.1.1.7
V2500 13523G>T missense_variant ORF1ab_pp1ab R4508L 1.00e+0 BA.1.1.7
V2503 13529G>T missense_variant ORF1ab_pp1ab R4510L 1.00e+0 BA.1.1.7
V2507 13558G>T missense_variant ORF1ab_pp1ab V4520F 1.00e+0 BA.1.1.7
V251 409G>T missense_variant ORF1ab_pp1a G137C 1.00e+0 BA.1.1.7
V2528 13694G>T missense_variant ORF1ab_pp1ab R4565L 1.00e+0 BA.1.1.7
V2529 13696G>T missense_variant ORF1ab_pp1ab V4566L 1.00e+0 BA.1.1.7
V2532 13702G>T missense_variant ORF1ab_pp1ab A4568S 1.00e+0 BA.1.1.7
V2534 13718G>T missense_variant ORF1ab_pp1ab R4573L 1.00e+0 BA.1.1.7
V2535 13724G>T missense_variant ORF1ab_pp1ab R4575L 1.00e+0 BA.1.1.7
V2540 13766G>T missense_variant ORF1ab_pp1ab R4589L 1.00e+0 BA.1.1.7
V2543 13834G>T missense_variant ORF1ab_pp1ab G4612C 1.00e+0 BA.1.1.7
V255 412G>T missense_variant ORF1ab_pp1a A138S 1.00e+0 BA.1.1.7
V257 415G>T missense_variant ORF1ab_pp1a D139Y 1.00e+0 BA.1.1.7
V2584 14030G>T missense_variant ORF1ab_pp1ab R4677L 1.00e+0 BA.1.1.7
V2612 14320G>T missense_variant ORF1ab_pp1ab A4774S 1.00e+0 BA.1.1.7
V2615 14351G>T missense_variant ORF1ab_pp1ab R4784L 1.00e+0 BA.1.1.7
V2620 14413G>T missense_variant ORF1ab_pp1ab G4805C 1.00e+0 BA.1.1.7
V2631 14530G>T missense_variant ORF1ab_pp1ab D4844Y 1.00e+0 BA.1.1.7
V2632 14546G>T missense_variant ORF1ab_pp1ab R4849L 1.00e+0 BA.1.1.7
V2641 14659G>T missense_variant ORF1ab_pp1ab V4887F 1.00e+0 BA.1.1.7
V2652 14761G>T missense_variant ORF1ab_pp1ab A4921S 1.00e+0 BA.1.1.7
V2654 14774G>T missense_variant ORF1ab_pp1ab R4925L 1.00e+0 BA.1.1.7
V2656 14840G>T missense_variant ORF1ab_pp1ab R4947L 1.00e+0 BA.1.1.7
V2657 14845G>T missense_variant ORF1ab_pp1ab V4949L 1.00e+0 BA.1.1.7
V2660 14917G>T missense_variant ORF1ab_pp1ab A4973S 1.00e+0 BA.1.1.7
V2680 15095G>T missense_variant ORF1ab_pp1ab R5032L 1.00e+0 BA.1.1.7
V2687 15128G>T missense_variant ORF1ab_pp1ab R5043L 1.00e+0 BA.1.1.7
V269 439G>T missense_variant ORF1ab_pp1a D147Y 1.00e+0 BA.1.1.7
V2695 15187G>T missense_variant ORF1ab_pp1ab G5063C 1.00e+0 BA.1.1.7
V270 442G>T stop_gained ORF1ab_pp1a E148* 1.00e+0 BA.1.1.7
V2702 15325G>T missense_variant ORF1ab_pp1ab D5109Y 1.00e+0 BA.1.1.7
V2706 15338G>T missense_variant ORF1ab_pp1ab R5113L 1.00e+0 BA.1.1.7
V2715 15415G>T missense_variant ORF1ab_pp1ab A5139S 1.00e+0 BA.1.1.7
V2716 15425G>T missense_variant ORF1ab_pp1ab R5142L 1.00e+0 BA.1.1.7
V2719 15457G>T missense_variant ORF1ab_pp1ab D5153Y 1.00e+0 BA.1.1.7
V2743 15697G>T missense_variant ORF1ab_pp1ab G5233C 1.00e+0 BA.1.1.7
V2745 15718G>T missense_variant ORF1ab_pp1ab V5240L 1.00e+0 BA.1.1.7
V2746 15749G>T missense_variant ORF1ab_pp1ab R5250L 1.00e+0 BA.1.1.7
V2747 15754G>T missense_variant ORF1ab_pp1ab V5252L 1.00e+0 BA.1.1.7
V2772 16034G>T missense_variant ORF1ab_pp1ab R5345L 1.00e+0 BA.1.1.7
V2796 16273G>T missense_variant ORF1ab_pp1ab D5425Y 1.00e+0 BA.1.1.7
V2812 16436G>T missense_variant ORF1ab_pp1ab R5479L 1.00e+0 BA.1.1.7
V2822 16505G>T missense_variant ORF1ab_pp1ab R5502L 1.00e+0 BA.1.1.7
V2823 16529G>T missense_variant ORF1ab_pp1ab R5510L 1.00e+0 BA.1.1.7
V2834 16607G>T missense_variant ORF1ab_pp1ab R5536L 1.00e+0 BA.1.1.7
V285 512G>T missense_variant ORF1ab_pp1a R171L 1.00e+0 BA.1.1.7
V287 524G>T missense_variant ORF1ab_pp1a R175L 1.00e+0 BA.1.1.7
V2880 16880G>T missense_variant ORF1ab_pp1ab R5627L 1.00e+0 BA.1.1.7
V2884 16909G>T missense_variant ORF1ab_pp1ab A5637S 1.00e+0 BA.1.1.7
V289 535G>T stop_gained ORF1ab_pp1a G179* 1.00e+0 BA.1.1.7
V2894 16982G>T missense_variant ORF1ab_pp1ab R5661L 1.00e+0 BA.1.1.7
V2896 16988G>T missense_variant ORF1ab_pp1ab R5663L 1.00e+0 BA.1.1.7
V29 -142G>T upstream_gene_variant ORF1ab_pp1a None 1.00e+0 BA.1.1.7
V2919 17173G>T missense_variant ORF1ab_pp1ab D5725Y 1.00e+0 BA.1.1.7
V2923 17198G>T missense_variant ORF1ab_pp1ab R5733L 1.00e+0 BA.1.1.7
V2933 17287G>T stop_gained ORF1ab_pp1ab G5763* 1.00e+0 BA.1.1.7
V2935 17297G>T missense_variant ORF1ab_pp1ab R5766L 1.00e+0 BA.1.1.7
V2936 17300G>T missense_variant ORF1ab_pp1ab R5767L 1.00e+0 BA.1.1.7
V2956 17455G>T missense_variant ORF1ab_pp1ab V5819L 1.00e+0 BA.1.1.7
V296 551G>T missense_variant ORF1ab_pp1a R184L 1.00e+0 BA.1.1.7
V2960 17477G>T missense_variant ORF1ab_pp1ab R5826L 1.00e+0 BA.1.1.7
V297 559G>T missense_variant ORF1ab_pp1a D187Y 1.00e+0 BA.1.1.7
V2992 17753G>T missense_variant ORF1ab_pp1ab R5918L 1.00e+0 BA.1.1.7
V3016 17899A>T missense_variant ORF1ab_pp1ab I5967L 1.00e+0 BA.1.1.7
V3039 18002G>T missense_variant ORF1ab_pp1ab R6001L 1.00e+0 BA.1.1.7
V3040 18004G>T stop_gained ORF1ab_pp1ab E6002* 1.00e+0 BA.1.1.7
V3045 18026G>T missense_variant ORF1ab_pp1ab R6009L 1.00e+0 BA.1.1.7
V3048 18043G>T missense_variant ORF1ab_pp1ab D6015Y 1.00e+0 BA.1.1.7
V3049 18049G>T stop_gained ORF1ab_pp1ab E6017* 1.00e+0 BA.1.1.7
V3085 18263G>T missense_variant ORF1ab_pp1ab R6088L 1.00e+0 BA.1.1.7
V3092 18319G>T missense_variant ORF1ab_pp1ab V6107L 1.00e+0 BA.1.1.7
V3102 18389G>T missense_variant ORF1ab_pp1ab R6130L 1.00e+0 BA.1.1.7
V3105 18413G>T missense_variant ORF1ab_pp1ab R6138L 1.00e+0 BA.1.1.7
V311 620G>T missense_variant ORF1ab_pp1a R207L 1.00e+0 BA.1.1.7
V3115 18481G>T missense_variant ORF1ab_pp1ab V6161F 1.00e+0 BA.1.1.7
V3130 18625G>T stop_gained ORF1ab_pp1ab E6209* 1.00e+0 BA.1.1.7
V3135 18641G>T missense_variant ORF1ab_pp1ab R6214L 1.00e+0 BA.1.1.7
V3187 18943G>T missense_variant ORF1ab_pp1ab D6315Y 1.00e+0 BA.1.1.7
V321 649G>T stop_gained ORF1ab_pp1a E217* 1.00e+0 BA.1.1.7
V3216 19202G>T missense_variant ORF1ab_pp1ab R6401L 1.00e+0 BA.1.1.7
V3220 19261G>T missense_variant ORF1ab_pp1ab D6421Y 1.00e+0 BA.1.1.7
V3254 19538G>T missense_variant ORF1ab_pp1ab R6513L 1.00e+0 BA.1.1.7
V3293 19769G>T missense_variant ORF1ab_pp1ab R6590L 1.00e+0 BA.1.1.7
V3310 19870G>T missense_variant ORF1ab_pp1ab V6624L 8.16e-1 BA.1.1.7
V332 695G>T missense_variant ORF1ab_pp1a R232L 1.00e+0 BA.1.1.7
V3331 20027G>T missense_variant ORF1ab_pp1ab R6676L 1.00e+0 BA.1.1.7
V3334 20053G>T stop_gained ORF1ab_pp1ab E6685* 1.00e+0 BA.1.1.7
V3338 20062G>T missense_variant ORF1ab_pp1ab V6688F 1.00e+0 BA.1.1.7
V3345 20126G>T missense_variant ORF1ab_pp1ab R6709L 1.00e+0 BA.1.1.7
V336 731G>T missense_variant ORF1ab_pp1a R244L 1.00e+0 BA.1.1.7
V3415 20527G>T missense_variant ORF1ab_pp1ab A6843S 1.00e+0 BA.1.1.7
V3428 20683G>T missense_variant ORF1ab_pp1ab D6895Y 1.00e+0 BA.1.1.7
V3444 20791G>T missense_variant ORF1ab_pp1ab D6931Y 1.00e+0 BA.1.1.7
V3462 20893G>T missense_variant ORF1ab_pp1ab V6965L 1.00e+0 BA.1.1.7
V3475 20956G>T missense_variant ORF1ab_pp1ab A6986S 1.00e+0 BA.1.1.7
V3487 21041G>T missense_variant ORF1ab_pp1ab R7014L 1.00e+0 BA.1.1.7
V3488 21043G>T stop_gained ORF1ab_pp1ab E7015* 1.00e+0 BA.1.1.7
V3517 -5G>T upstream_gene_variant S None 1.00e+0 BA.1.1.7
V3562 101G>T missense_variant S R34L 1.00e+0 BA.1.1.7
V3581 205_208delCATG frameshift_variant S H69fs 1.00e+0 BA.1.1.7
V3621 367G>T missense_variant S A123S 1.00e+0 BA.1.1.7
V370 902G>T missense_variant ORF1ab_pp1a R301L 1.00e+0 BA.1.1.7
V3737 641G>T missense_variant S R214L 7.07e-1 BA.1.1.7
V38 -114G>T upstream_gene_variant ORF1ab_pp1a None 1.00e+0 BA.1.1.7
V3822 1030G>T missense_variant S A344S 7.07e-1 BA.1.1.7
V3857 1231G>T missense_variant S A411S 7.07e-1 BA.1.1.7
V3923 1478A>T missense_variant S Q493L 7.07e-1 BA.1.1.7
V3959 1730G>T missense_variant S R577L 1.00e+0 BA.1.1.7
V396 1003G>T missense_variant ORF1ab_pp1a D335Y 1.00e+0 BA.1.1.7
V3985 1901G>T missense_variant S R634L 1.00e+0 BA.1.1.7
V3991 1937G>T missense_variant S R646L 1.00e+0 BA.1.1.7
V4005 2014G>T missense_variant S A672S 1.00e+0 BA.1.1.7
V401 1024G>T stop_gained ORF1ab_pp1a E342* 1.00e+0 BA.1.1.7
V4025 2045G>T missense_variant S R682L 1.00e+0 BA.1.1.7
V4026 2048G>T missense_variant S R683L 1.00e+0 BA.1.1.7
V4029 2054G>T missense_variant S R685L 1.00e+0 BA.1.1.7
V4065 2294G>T missense_variant S R765L 1.00e+0 BA.1.1.7
V41 -101G>T upstream_gene_variant ORF1ab_pp1a None 1.00e+0 BA.1.1.7
V4150 2948G>T missense_variant S R983L 1.00e+0 BA.1.1.7
V4185 3272G>T missense_variant S R1091L 1.00e+0 BA.1.1.7
V4235 3554G>T missense_variant S R1185L 1.00e+0 BA.1.1.7
V4244 3595G>T missense_variant S D1199Y 1.00e+0 BA.1.1.7
V4289 3778G>T missense_variant S D1260Y 1.00e+0 BA.1.1.7
V4302 -6G>T upstream_gene_variant ORF3a None 1.00e+0 BA.1.1.7
V4345 89G>T missense_variant ORF3a R30L 1.00e+0 BA.1.1.7
V4347 91G>T missense_variant ORF3a A31S 1.00e+0 BA.1.1.7
V437 1156G>T stop_gained ORF1ab_pp1a E386* 1.00e+0 BA.1.1.7
V4379 130G>T stop_gained ORF3a G44* 1.00e+0 BA.1.1.7
V4391 148G>T missense_variant ORF3a V50F 1.00e+0 BA.1.1.7
V4410 175G>T missense_variant ORF3a A59S 1.00e+0 BA.1.1.7
V4459 289G>T missense_variant ORF3a V97F 1.00e+0 BA.1.1.7
V446 1193G>T missense_variant ORF1ab_pp1a R398L 1.00e+0 BA.1.1.7
V4512 401G>T missense_variant ORF3a R134L 1.00e+0 BA.1.1.7
V4524 463G>T missense_variant ORF3a D155Y 1.00e+0 BA.1.1.7
V453 1205G>T missense_variant ORF1ab_pp1a R402L 1.00e+0 BA.1.1.7
V4614 751G>T missense_variant ORF3a G251C 1.00e+0 BA.1.1.7
V4620 760G>T stop_gained ORF3a G254* 1.00e+0 BA.1.1.7
V464 1277G>T missense_variant ORF1ab_pp1a R426L 1.00e+0 BA.1.1.7
V4652 817G>T missense_variant ORF3a V273L 1.00e+0 BA.1.1.7
V4672 70G>T missense_variant E V24L 1.00e+0 BA.1.1.7
V4678 145G>T missense_variant E V49L 1.00e+0 BA.1.1.7
V4685 172G>T missense_variant E V58F 1.00e+0 BA.1.1.7
V4686 182G>T missense_variant E R61L 1.00e+0 BA.1.1.7
V469 1285G>T missense_variant ORF1ab_pp1a A429S 1.00e+0 BA.1.1.7
V4722 16G>T missense_variant M G6C 1.00e+0 BA.1.1.7
V4757 232G>T missense_variant M G78C 1.00e+0 BA.1.1.7
V4763 247G>T missense_variant M A83S 1.00e+0 BA.1.1.7
V4772 320G>T missense_variant M R107L 1.00e+0 BA.1.1.7
V4782 473G>T missense_variant M R158L 1.00e+0 BA.1.1.7
V4784 521G>T missense_variant M R174L 1.00e+0 BA.1.1.7
V4788 593G>T missense_variant M R198L 1.00e+0 BA.1.1.7
V48 -92G>T upstream_gene_variant ORF1ab_pp1a None 1.00e+0 BA.1.1.7
V4800 13G>T missense_variant ORF6 V5F 1.00e+0 BA.1.1.7
V4812 59G>T missense_variant ORF6 R20M 1.00e+0 BA.1.1.7
V484 1330G>T stop_gained ORF1ab_pp1a E444* 1.00e+0 BA.1.1.7
V4844 -4G>T upstream_gene_variant ORF7a None 1.00e+0 BA.1.1.7
V4864 37G>T missense_variant ORF7a A13S 1.00e+0 BA.1.1.7
V4895 121G>T stop_gained ORF7a E41* 1.00e+0 BA.1.1.7
V4930 208G>T missense_variant ORF7a G70C 1.00e+0 BA.1.1.7
V4932 211G>T missense_variant ORF7a V71L 1.00e+0 BA.1.1.7
V4937 220G>T missense_variant ORF7a V74F 1.00e+0 BA.1.1.7
V4943 233G>T missense_variant ORF7a R78L 1.00e+0 BA.1.1.7
V5056 127G>T missense_variant ORF7b A43S 7.07e-1 BA.1.1.7
V5061 -4G>T upstream_gene_variant ORF8 None 7.07e-1 BA.1.1.7
V511 1420G>T missense_variant ORF1ab_pp1a A474S 1.00e+0 BA.1.1.7
V5144 184G>T missense_variant ORF8 V62L 8.16e-1 BA.1.1.7
V5173 223G>T missense_variant ORF8 D75Y 1.00e+0 BA.1.1.7
V5176 229G>T missense_variant ORF8 G77C 1.00e+0 BA.1.1.7
V5196 302G>T missense_variant ORF8 R101L 1.00e+0 BA.1.1.7
V5209 340G>T missense_variant ORF8 V114F 1.00e+0 BA.1.1.7
V5212 344G>T missense_variant ORF8 R115L 1.00e+0 BA.1.1.7
V5234 -12G>T upstream_gene_variant N None 1.00e+0 BA.1.1.7
V5266 29G>T missense_variant N R10L 1.00e+0 BA.1.1.7
V5277 41G>T missense_variant N R14L 1.00e+0 BA.1.1.7
V5308 90_97delAGAACGCA frameshift_variant N E31fs 8.16e-1 BA.1.1.7
V5324 107G>T missense_variant N R36L 1.00e+0 BA.1.1.7
V5331 119G>T missense_variant N R40L 1.00e+0 BA.1.1.7
V5333 122G>T missense_variant N R41L 1.00e+0 BA.1.1.7
V5337 163G>T missense_variant N A55S 1.00e+0 BA.1.1.7
V5345 203G>T missense_variant N R68L 1.00e+0 BA.1.1.7
V5349 214G>T missense_variant N V72F 1.00e+0 BA.1.1.7
V5355 263G>T missense_variant N R88L 1.00e+0 BA.1.1.7
V5359 278G>T missense_variant N R93L 1.00e+0 BA.1.1.7
V5361 284G>T missense_variant N R95L 1.00e+0 BA.1.1.7
V5364 295G>T missense_variant N G99C 1.00e+0 BA.1.1.7
V5379 385G>T missense_variant N G129C 1.00e+0 BA.1.1.7
V5395 446G>T missense_variant N R149L 1.00e+0 BA.1.1.7
V5404 472G>T missense_variant N V158L 1.00e+0 BA.1.1.7
V5414 517G>T missense_variant N A173S 1.00e+0 BA.1.1.7
V5419 535G>T missense_variant N G179C 1.00e+0 BA.1.1.7
V5429 554G>T missense_variant N R185L 1.00e+0 BA.1.1.7
V5434 566G>T missense_variant N R189L 1.00e+0 BA.1.1.7
V5437 572G>T missense_variant N R191L 1.00e+0 BA.1.1.7
V5467 611G>T missense_variant N G204V 1.00e+0 BA.1.1.7
V5496 643G>T missense_variant N G215C 8.16e-1 BA.1.1.7
V5536 776G>T missense_variant N R259L 1.00e+0 BA.1.1.7
V5537 785G>T missense_variant N R262L 1.00e+0 BA.1.1.7
V554 1625G>T missense_variant ORF1ab_pp1a R542L 1.00e+0 BA.1.1.7
V5546 823G>T missense_variant N G275C 1.00e+0 BA.1.1.7
V5547 830G>T missense_variant N R277L 1.00e+0 BA.1.1.7
V556 1634G>T missense_variant ORF1ab_pp1a R545L 1.00e+0 BA.1.1.7
V5565 931G>T missense_variant N A311S 1.00e+0 BA.1.1.7
V5566 946G>T stop_gained N G316* 1.00e+0 BA.1.1.7
V5570 956G>T missense_variant N R319L 1.00e+0 BA.1.1.7
V5594 1075G>T missense_variant N A359S 1.00e+0 BA.1.1.7
V563 1649G>T missense_variant ORF1ab_pp1a R550L 1.00e+0 BA.1.1.7
V5688 16G>T missense_variant ORF10 V6F 1.00e+0 BA.1.1.7
V5690 22G>T missense_variant ORF10 A8S 1.00e+0 BA.1.1.7
V5708 71G>T missense_variant ORF10 R24L 1.00e+0 BA.1.1.7
V574 1679G>T missense_variant ORF1ab_pp1a R560L 1.00e+0 BA.1.1.7
V5762 *4350G>T downstream_gene_variant S None 7.07e-1 BA.1.1.7
V5781 *4360G>T downstream_gene_variant S None 7.07e-1 BA.1.1.7
V5790 *4367G>T downstream_gene_variant S None 7.07e-1 BA.1.1.7
V581 1696G>T missense_variant ORF1ab_pp1a A566S 1.00e+0 BA.1.1.7
V5875 222G>T synonymous_variant ORF1ab_pp1a S74S 1.00e+0 BA.1.1.7
V5970 726G>T synonymous_variant ORF1ab_pp1a T242T 1.00e+0 BA.1.1.7
V5998 921G>T synonymous_variant ORF1ab_pp1a A307A 1.00e+0 BA.1.1.7
V6010 999G>T synonymous_variant ORF1ab_pp1a T333T 1.00e+0 BA.1.1.7
V61 -68G>T upstream_gene_variant ORF1ab_pp1a None 1.00e+0 BA.1.1.7
V6121 1830G>T synonymous_variant ORF1ab_pp1a S610S 1.00e+0 BA.1.1.7
V6165 2133G>T synonymous_variant ORF1ab_pp1a T711T 1.00e+0 BA.1.1.7
V631 1879G>T missense_variant ORF1ab_pp1a V627F 1.00e+0 BA.1.1.7
V6413 3942G>T synonymous_variant ORF1ab_pp1a A1314A 1.00e+0 BA.1.1.7
V6420 3990G>T synonymous_variant ORF1ab_pp1a P1330P 1.00e+0 BA.1.1.7
V643 1933G>T missense_variant ORF1ab_pp1a G645C 1.00e+0 BA.1.1.7
V6481 4455G>T synonymous_variant ORF1ab_pp1a A1485A 1.00e+0 BA.1.1.7
V6521 4743G>T synonymous_variant ORF1ab_pp1a T1581T 1.00e+0 BA.1.1.7
V657 1981G>T missense_variant ORF1ab_pp1a G661C 1.00e+0 BA.1.1.7
V6610 5364G>T synonymous_variant ORF1ab_pp1a T1788T 1.00e+0 BA.1.1.7
V6634 5592G>T synonymous_variant ORF1ab_pp1a T1864T 1.00e+0 BA.1.1.7
V6686 6006G>T synonymous_variant ORF1ab_pp1a T2002T 1.00e+0 BA.1.1.7
V6695 6072G>T synonymous_variant ORF1ab_pp1a S2024S 1.00e+0 BA.1.1.7
V6704 6099G>T synonymous_variant ORF1ab_pp1a A2033A 1.00e+0 BA.1.1.7
V6765 6585G>T synonymous_variant ORF1ab_pp1a P2195P 1.00e+0 BA.1.1.7
V6830 7128G>T synonymous_variant ORF1ab_pp1a P2376P 1.00e+0 BA.1.1.7
V6859 7410G>T synonymous_variant ORF1ab_pp1a A2470A 1.00e+0 BA.1.1.7
V6890 7671G>T synonymous_variant ORF1ab_pp1a A2557A 1.00e+0 BA.1.1.7
V69 -62G>T upstream_gene_variant ORF1ab_pp1a None 1.00e+0 BA.1.1.7
V6900 7752G>T synonymous_variant ORF1ab_pp1a A2584A 1.00e+0 BA.1.1.7
V6908 7791G>T synonymous_variant ORF1ab_pp1a T2597T 1.00e+0 BA.1.1.7
V6950 8088G>T synonymous_variant ORF1ab_pp1a A2696A 1.00e+0 BA.1.1.7
V6952 8103G>T synonymous_variant ORF1ab_pp1a A2701A 1.00e+0 BA.1.1.7
V7015 8613C>T synonymous_variant ORF1ab_pp1a G2871G 7.07e-1 BA.1.1.7
V7125 9537G>T synonymous_variant ORF1ab_pp1a A3179A 8.16e-1 BA.1.1.7
V7140 9606G>T synonymous_variant ORF1ab_pp1a T3202T 1.00e+0 BA.1.1.7
V72 -58G>T upstream_gene_variant ORF1ab_pp1a None 1.00e+0 BA.1.1.7
V7246 10377G>T synonymous_variant ORF1ab_pp1a T3459T 1.00e+0 BA.1.1.7
V747 2359G>T missense_variant ORF1ab_pp1a G787W 1.00e+0 BA.1.1.7
V7480 12249G>T synonymous_variant ORF1ab_pp1a T4083T 1.00e+0 BA.1.1.7
V7502 12504G>T synonymous_variant ORF1ab_pp1a A4168A 1.00e+0 BA.1.1.7
V752 2374G>T stop_gained ORF1ab_pp1a E792* 1.00e+0 BA.1.1.7
V7559 12936G>T synonymous_variant ORF1ab_pp1a P4312P 1.00e+0 BA.1.1.7
V7567 12975G>T synonymous_variant ORF1ab_pp1a S4325S 1.00e+0 BA.1.1.7
V7602 13194G>T synonymous_variant ORF1ab_pp1a S4398S 8.16e-1 BA.1.1.7
V7604 13239G>T synonymous_variant ORF1ab_pp1ab P4413P 1.00e+0 BA.1.1.7
V762 2452G>T missense_variant ORF1ab_pp1a G818C 1.00e+0 BA.1.1.7
V7677 13854G>T synonymous_variant ORF1ab_pp1ab T4618T 1.00e+0 BA.1.1.7
V7699 14004G>T synonymous_variant ORF1ab_pp1ab T4668T 1.00e+0 BA.1.1.7
V7751 14358G>T synonymous_variant ORF1ab_pp1ab T4786T 1.00e+0 BA.1.1.7
V782 2593G>T missense_variant ORF1ab_pp1a G865C 1.00e+0 BA.1.1.7
V7846 15108G>T synonymous_variant ORF1ab_pp1ab T5036T 1.00e+0 BA.1.1.7
V7869 15279G>T synonymous_variant ORF1ab_pp1ab T5093T 8.16e-1 BA.1.1.7
V787 2614G>T missense_variant ORF1ab_pp1a A872S 1.00e+0 BA.1.1.7
V7951 15957G>T synonymous_variant ORF1ab_pp1ab P5319P 1.00e+0 BA.1.1.7
V7974 16113G>T synonymous_variant ORF1ab_pp1ab P5371P 1.00e+0 BA.1.1.7
V8011 16383G>T synonymous_variant ORF1ab_pp1ab T5461T 1.00e+0 BA.1.1.7
V81 -47G>T upstream_gene_variant ORF1ab_pp1a None 1.00e+0 BA.1.1.7
V8101 17070G>T synonymous_variant ORF1ab_pp1ab T5690T 1.00e+0 BA.1.1.7
V8145 17415G>T synonymous_variant ORF1ab_pp1ab T5805T 1.00e+0 BA.1.1.7
V8252 18198G>T synonymous_variant ORF1ab_pp1ab P6066P 1.00e+0 BA.1.1.7
V8296 18492G>T synonymous_variant ORF1ab_pp1ab P6164P 1.00e+0 BA.1.1.7
V8328 18696G>T synonymous_variant ORF1ab_pp1ab A6232A 1.00e+0 BA.1.1.7
V8388 19191G>T synonymous_variant ORF1ab_pp1ab T6397T 1.00e+0 BA.1.1.7
V8446 19698G>T synonymous_variant ORF1ab_pp1ab T6566T 1.00e+0 BA.1.1.7
V8502 20205G>T synonymous_variant ORF1ab_pp1ab A6735A 1.00e+0 BA.1.1.7
V8519 20406G>T synonymous_variant ORF1ab_pp1ab A6802A 1.00e+0 BA.1.1.7
V8521 20415G>T synonymous_variant ORF1ab_pp1ab P6805P 1.00e+0 BA.1.1.7
V8547 20667G>T synonymous_variant ORF1ab_pp1ab T6889T 1.00e+0 BA.1.1.7
V8549 20673G>T synonymous_variant ORF1ab_pp1ab T6891T 1.00e+0 BA.1.1.7
V8592 20991G>T synonymous_variant ORF1ab_pp1ab A6997A 7.07e-1 BA.1.1.7
V8678 336G>T synonymous_variant S S112S 1.00e+0 BA.1.1.7
V8698 489G>T synonymous_variant S A163A 7.07e-1 BA.1.1.7
V8711 624G>T synonymous_variant S T208T 7.07e-1 BA.1.1.7
V8721 663G>T synonymous_variant S S221S 7.07e-1 BA.1.1.7
V882 2977G>T missense_variant ORF1ab_pp1a G993C 1.00e+0 BA.1.1.7
V8973 2637G>T synonymous_variant S A879A 1.00e+0 BA.1.1.7
V9003 2883G>T synonymous_variant S T961T 1.00e+0 BA.1.1.7
V9151 102G>T synonymous_variant ORF3a T34T 1.00e+0 BA.1.1.7
V9154 108G>T synonymous_variant ORF3a P36P 1.00e+0 BA.1.1.7
V9253 801G>T synonymous_variant ORF3a P267P 1.00e+0 BA.1.1.7
V9254 804G>T synonymous_variant ORF3a T268T 1.00e+0 BA.1.1.7
V9256 807G>T synonymous_variant ORF3a T269T 1.00e+0 BA.1.1.7
V9262 18G>T synonymous_variant E S6S 1.00e+0 BA.1.1.7
V9274 108G>T synonymous_variant E A36A 1.00e+0 BA.1.1.7
V9330 312G>T synonymous_variant M A104A 1.00e+0 BA.1.1.7
V9332 318G>T synonymous_variant M T106T 1.00e+0 BA.1.1.7
V9351 396G>T synonymous_variant M P132P 1.00e+0 BA.1.1.7
V9376 525G>T synonymous_variant M T175T 1.00e+0 BA.1.1.7
V9381 552G>T synonymous_variant M S184S 1.00e+0 BA.1.1.7
V9480 315G>T synonymous_variant ORF7a A105A 1.00e+0 BA.1.1.7
V9523 108G>T synonymous_variant ORF8 P36P 1.00e+0 BA.1.1.7
V9550 309G>T synonymous_variant ORF8 S103S 1.00e+0 BA.1.1.7
V9568 48G>T synonymous_variant N T16T 1.00e+0 BA.1.1.7
V9582 105G>T synonymous_variant N A35A 1.00e+0 BA.1.1.7
V9596 150G>T synonymous_variant N A50A 1.00e+0 BA.1.1.7
V9744 906G>T synonymous_variant N P302P 1.00e+0 BA.1.1.7
V9753 939G>T synonymous_variant N A313A 1.00e+0 BA.1.1.7
V9758 954G>T synonymous_variant N S318S 1.00e+0 BA.1.1.7
V9764 981G>T synonymous_variant N S327S 1.00e+0 BA.1.1.7
V9766 987G>T synonymous_variant N T329T 1.00e+0 BA.1.1.7
V978 3319G>T stop_gained ORF1ab_pp1a G1107* 1.00e+0 BA.1.1.7
V9797 1149G>T synonymous_variant N P383P 1.00e+0 BA.1.1.7
V9824 30G>T synonymous_variant ORF10 P10P 1.00e+0 BA.1.1.7
V9825 36G>T synonymous_variant ORF10 T12T 1.00e+0 BA.1.1.7
V988 3355G>T missense_variant ORF1ab_pp1a G1119C 1.00e+0 BA.1.1.7
V1002 3424G>T stop_gained ORF1ab_pp1a E1142* 1.00e+0 BA.1.19
V1026 3509G>T missense_variant ORF1ab_pp1a R1170L 1.00e+0 BA.1.19
V103 -20G>T upstream_gene_variant ORF1ab_pp1a None 1.00e+0 BA.1.19
V1047 3610G>T missense_variant ORF1ab_pp1a A1204S 1.00e+0 BA.1.19
V11 -194G>T upstream_gene_variant ORF1ab_pp1a None 1.00e+0 BA.1.19
V111 -10G>T upstream_gene_variant ORF1ab_pp1a None 1.00e+0 BA.1.19
V1133 4127G>T missense_variant ORF1ab_pp1a R1376L 1.00e+0 BA.1.19
V1139 4157G>T missense_variant ORF1ab_pp1a R1386L 1.00e+0 BA.1.19
V1146 4211G>T missense_variant ORF1ab_pp1a R1404L 1.00e+0 BA.1.19
V1159 4318G>T missense_variant ORF1ab_pp1a D1440Y 1.00e+0 BA.1.19
V1164 4391G>T missense_variant ORF1ab_pp1a R1464L 1.00e+0 BA.1.19
V118 28G>T stop_gained ORF1ab_pp1a E10* 1.00e+0 BA.1.19
V120 40G>T missense_variant ORF1ab_pp1a V14F 1.00e+0 BA.1.19
V124 71G>T missense_variant ORF1ab_pp1a R24L 1.00e+0 BA.1.19
V125 73G>T missense_variant ORF1ab_pp1a D25Y 1.00e+0 BA.1.19
V1252 4883G>T missense_variant ORF1ab_pp1a R1628L 1.00e+0 BA.1.19
V126 76G>T missense_variant ORF1ab_pp1a V26L 1.00e+0 BA.1.19
V1298 5248G>T missense_variant ORF1ab_pp1a V1750L 1.00e+0 BA.1.19
V130 82G>T missense_variant ORF1ab_pp1a V28L 1.00e+0 BA.1.19
V132 86G>T missense_variant ORF1ab_pp1a R29L 1.00e+0 BA.1.19
V1345 5548G>T missense_variant ORF1ab_pp1a G1850C 1.00e+0 BA.1.19
V1374 5767G>T missense_variant ORF1ab_pp1a A1923S 1.00e+0 BA.1.19
V139 103G>T missense_variant ORF1ab_pp1a V35L 1.00e+0 BA.1.19
V1409 6032G>T missense_variant ORF1ab_pp1a R2011L 1.00e+0 BA.1.19
V1422 6071C>T missense_variant ORF1ab_pp1a S2024L 7.07e-1 BA.1.19
V1432 6097G>T missense_variant ORF1ab_pp1a A2033S 1.00e+0 BA.1.19
V1439 6124G>T stop_gained ORF1ab_pp1a E2042* 1.00e+0 BA.1.19
V1458 6181G>T missense_variant ORF1ab_pp1a V2061F 7.07e-1 BA.1.19
V146 128G>T missense_variant ORF1ab_pp1a R43L 1.00e+0 BA.1.19
V1464 6208G>T stop_gained ORF1ab_pp1a E2070* 1.00e+0 BA.1.19
V1544 6476G>T missense_variant ORF1ab_pp1a R2159L 1.00e+0 BA.1.19
V1546 6488G>T missense_variant ORF1ab_pp1a R2163L 1.00e+0 BA.1.19
V1565 6619G>T missense_variant ORF1ab_pp1a G2207C 1.00e+0 BA.1.19
V1578 6742G>T missense_variant ORF1ab_pp1a A2248S 1.00e+0 BA.1.19
V162 178G>T missense_variant ORF1ab_pp1a V60F 1.00e+0 BA.1.19
V1644 7207G>T missense_variant ORF1ab_pp1a G2403C 1.00e+0 BA.1.19
V1649 7244G>T missense_variant ORF1ab_pp1a R2415L 1.00e+0 BA.1.19
V1651 7264G>T stop_gained ORF1ab_pp1a E2422* 1.00e+0 BA.1.19
V1662 7471G>T missense_variant ORF1ab_pp1a V2491F 1.00e+0 BA.1.19
V168 218G>T missense_variant ORF1ab_pp1a R73L 1.00e+0 BA.1.19
V1712 7783G>T missense_variant ORF1ab_pp1a V2595F 1.00e+0 BA.1.19
V1716 7810G>T missense_variant ORF1ab_pp1a V2604L 1.00e+0 BA.1.19
V1743 7913G>T missense_variant ORF1ab_pp1a R2638L 1.00e+0 BA.1.19
V175 230G>T missense_variant ORF1ab_pp1a R77L 1.00e+0 BA.1.19
V1753 8002G>T missense_variant ORF1ab_pp1a D2668Y 1.00e+0 BA.1.19
V1760 8057G>T missense_variant ORF1ab_pp1a R2686L 1.00e+0 BA.1.19
V1766 8090G>T missense_variant ORF1ab_pp1a R2697L 1.00e+0 BA.1.19
V1774 8143G>T missense_variant ORF1ab_pp1a V2715F 1.00e+0 BA.1.19
V1777 8177G>T missense_variant ORF1ab_pp1a R2726L 1.00e+0 BA.1.19
V1778 8189G>T missense_variant ORF1ab_pp1a R2730L 1.00e+0 BA.1.19
V1819 8453G>T missense_variant ORF1ab_pp1a R2818L 1.00e+0 BA.1.19
V1829 8522G>T missense_variant ORF1ab_pp1a R2841L 1.00e+0 BA.1.19
V1846 8596G>T missense_variant ORF1ab_pp1a V2866L 1.00e+0 BA.1.19
V1857 8624G>T missense_variant ORF1ab_pp1a R2875L 1.00e+0 BA.1.19
V1883 8846G>T missense_variant ORF1ab_pp1a R2949L 1.00e+0 BA.1.19
V1886 8858G>T missense_variant ORF1ab_pp1a R2953L 1.00e+0 BA.1.19
V1900 8959G>T missense_variant ORF1ab_pp1a G2987C 1.00e+0 BA.1.19
V1961 9491G>T missense_variant ORF1ab_pp1a R3164L 1.00e+0 BA.1.19
V1964 9581G>T missense_variant ORF1ab_pp1a R3194L 1.00e+0 BA.1.19
V1979 9703G>T missense_variant ORF1ab_pp1a A3235S 1.00e+0 BA.1.19
V1993 9874G>T missense_variant ORF1ab_pp1a G3292C 1.00e+0 BA.1.19
V1997 9892G>T missense_variant ORF1ab_pp1a V3298L 1.00e+0 BA.1.19
V2005 9968G>T missense_variant ORF1ab_pp1a R3323L 1.00e+0 BA.1.19
V2030 10103G>T missense_variant ORF1ab_pp1a R3368L 1.00e+0 BA.1.19
V2055 10417G>T missense_variant ORF1ab_pp1a A3473S 1.00e+0 BA.1.19
V2060 10454G>T missense_variant ORF1ab_pp1a R3485L 1.00e+0 BA.1.19
V207 277G>T stop_gained ORF1ab_pp1a E93* 1.00e+0 BA.1.19
V2079 10570G>T missense_variant ORF1ab_pp1a V3524F 1.00e+0 BA.1.19
V2087 10625G>T missense_variant ORF1ab_pp1a R3542L 1.00e+0 BA.1.19
V21 -165G>T upstream_gene_variant ORF1ab_pp1a None 7.07e-1 BA.1.19
V212 292G>T missense_variant ORF1ab_pp1a G98C 1.00e+0 BA.1.19
V215 296G>T missense_variant ORF1ab_pp1a R99L 1.00e+0 BA.1.19
V2188 11152G>T missense_variant ORF1ab_pp1a V3718F 1.00e+0 BA.1.19
V2238 11405G>T missense_variant ORF1ab_pp1a R3802L 1.00e+0 BA.1.19
V228 337G>T stop_gained ORF1ab_pp1a E113* 1.00e+0 BA.1.19
V2310 11978G>T missense_variant ORF1ab_pp1a R3993L 1.00e+0 BA.1.19
V2313 11996G>T missense_variant ORF1ab_pp1a R3999L 1.00e+0 BA.1.19
V2358 12449G>T missense_variant ORF1ab_pp1a R4150L 1.00e+0 BA.1.19
V2362 12469G>T missense_variant ORF1ab_pp1a G4157C 1.00e+0 BA.1.19
V2386 12559G>T missense_variant ORF1ab_pp1a D4187Y 1.00e+0 BA.1.19
V239 356G>T missense_variant ORF1ab_pp1a R119L 1.00e+0 BA.1.19
V2406 12752G>T missense_variant ORF1ab_pp1a R4251L 1.00e+0 BA.1.19
V2424 12992G>T missense_variant ORF1ab_pp1a R4331L 1.00e+0 BA.1.19
V243 371G>T missense_variant ORF1ab_pp1a R124L 1.00e+0 BA.1.19
V2438 13114G>T missense_variant ORF1ab_pp1a V4372F 1.00e+0 BA.1.19
V2439 13120G>T missense_variant ORF1ab_pp1a G4374C 1.00e+0 BA.1.19
V2445 13160G>T missense_variant ORF1ab_pp1a R4387L 1.00e+0 BA.1.19
V2446 13162G>T stop_gained ORF1ab_pp1a E4388* 1.00e+0 BA.1.19
V245 379G>T missense_variant ORF1ab_pp1a G127C 1.00e+0 BA.1.19
V2452 13204G>T missense_variant ORF1ab_pp1a G4402W 1.00e+0 BA.1.19
V2453 13213G>T missense_variant ORF1ab_pp1ab G4405C 1.00e+0 BA.1.19
V2456 13229G>T missense_variant ORF1ab_pp1ab R4410L 1.00e+0 BA.1.19
V2459 13243G>T missense_variant ORF1ab_pp1ab G4415C 1.00e+0 BA.1.19
V2463 13267G>T missense_variant ORF1ab_pp1ab V4423L 1.00e+0 BA.1.19
V2470 13340G>T missense_variant ORF1ab_pp1ab R4447L 1.00e+0 BA.1.19
V2474 13357G>T stop_gained ORF1ab_pp1ab E4453* 1.00e+0 BA.1.19
V2496 13498G>T missense_variant ORF1ab_pp1ab G4500C 1.00e+0 BA.1.19
V2500 13523G>T missense_variant ORF1ab_pp1ab R4508L 1.00e+0 BA.1.19
V2503 13529G>T missense_variant ORF1ab_pp1ab R4510L 1.00e+0 BA.1.19
V2507 13558G>T missense_variant ORF1ab_pp1ab V4520F 1.00e+0 BA.1.19
V251 409G>T missense_variant ORF1ab_pp1a G137C 1.00e+0 BA.1.19
V2528 13694G>T missense_variant ORF1ab_pp1ab R4565L 1.00e+0 BA.1.19
V2529 13696G>T missense_variant ORF1ab_pp1ab V4566L 1.00e+0 BA.1.19
V2532 13702G>T missense_variant ORF1ab_pp1ab A4568S 1.00e+0 BA.1.19
V2534 13718G>T missense_variant ORF1ab_pp1ab R4573L 1.00e+0 BA.1.19
V2535 13724G>T missense_variant ORF1ab_pp1ab R4575L 1.00e+0 BA.1.19
V2540 13766G>T missense_variant ORF1ab_pp1ab R4589L 1.00e+0 BA.1.19
V2543 13834G>T missense_variant ORF1ab_pp1ab G4612C 1.00e+0 BA.1.19
V255 412G>T missense_variant ORF1ab_pp1a A138S 1.00e+0 BA.1.19
V257 415G>T missense_variant ORF1ab_pp1a D139Y 1.00e+0 BA.1.19
V2584 14030G>T missense_variant ORF1ab_pp1ab R4677L 1.00e+0 BA.1.19
V2612 14320G>T missense_variant ORF1ab_pp1ab A4774S 1.00e+0 BA.1.19
V2615 14351G>T missense_variant ORF1ab_pp1ab R4784L 1.00e+0 BA.1.19
V2620 14413G>T missense_variant ORF1ab_pp1ab G4805C 1.00e+0 BA.1.19
V2631 14530G>T missense_variant ORF1ab_pp1ab D4844Y 1.00e+0 BA.1.19
V2632 14546G>T missense_variant ORF1ab_pp1ab R4849L 1.00e+0 BA.1.19
V2641 14659G>T missense_variant ORF1ab_pp1ab V4887F 1.00e+0 BA.1.19
V2652 14761G>T missense_variant ORF1ab_pp1ab A4921S 1.00e+0 BA.1.19
V2654 14774G>T missense_variant ORF1ab_pp1ab R4925L 1.00e+0 BA.1.19
V2656 14840G>T missense_variant ORF1ab_pp1ab R4947L 1.00e+0 BA.1.19
V2657 14845G>T missense_variant ORF1ab_pp1ab V4949L 1.00e+0 BA.1.19
V2660 14917G>T missense_variant ORF1ab_pp1ab A4973S 1.00e+0 BA.1.19
V2680 15095G>T missense_variant ORF1ab_pp1ab R5032L 1.00e+0 BA.1.19
V2687 15128G>T missense_variant ORF1ab_pp1ab R5043L 1.00e+0 BA.1.19
V269 439G>T missense_variant ORF1ab_pp1a D147Y 1.00e+0 BA.1.19
V2695 15187G>T missense_variant ORF1ab_pp1ab G5063C 1.00e+0 BA.1.19
V270 442G>T stop_gained ORF1ab_pp1a E148* 1.00e+0 BA.1.19
V2702 15325G>T missense_variant ORF1ab_pp1ab D5109Y 1.00e+0 BA.1.19
V2706 15338G>T missense_variant ORF1ab_pp1ab R5113L 1.00e+0 BA.1.19
V2715 15415G>T missense_variant ORF1ab_pp1ab A5139S 1.00e+0 BA.1.19
V2716 15425G>T missense_variant ORF1ab_pp1ab R5142L 1.00e+0 BA.1.19
V2719 15457G>T missense_variant ORF1ab_pp1ab D5153Y 1.00e+0 BA.1.19
V2743 15697G>T missense_variant ORF1ab_pp1ab G5233C 1.00e+0 BA.1.19
V2745 15718G>T missense_variant ORF1ab_pp1ab V5240L 1.00e+0 BA.1.19
V2746 15749G>T missense_variant ORF1ab_pp1ab R5250L 1.00e+0 BA.1.19
V2747 15754G>T missense_variant ORF1ab_pp1ab V5252L 1.00e+0 BA.1.19
V2772 16034G>T missense_variant ORF1ab_pp1ab R5345L 1.00e+0 BA.1.19
V2796 16273G>T missense_variant ORF1ab_pp1ab D5425Y 1.00e+0 BA.1.19
V2812 16436G>T missense_variant ORF1ab_pp1ab R5479L 7.07e-1 BA.1.19
V2822 16505G>T missense_variant ORF1ab_pp1ab R5502L 1.00e+0 BA.1.19
V2823 16529G>T missense_variant ORF1ab_pp1ab R5510L 1.00e+0 BA.1.19
V2834 16607G>T missense_variant ORF1ab_pp1ab R5536L 1.00e+0 BA.1.19
V285 512G>T missense_variant ORF1ab_pp1a R171L 1.00e+0 BA.1.19
V287 524G>T missense_variant ORF1ab_pp1a R175L 1.00e+0 BA.1.19
V2880 16880G>T missense_variant ORF1ab_pp1ab R5627L 1.00e+0 BA.1.19
V2884 16909G>T missense_variant ORF1ab_pp1ab A5637S 1.00e+0 BA.1.19
V289 535G>T stop_gained ORF1ab_pp1a G179* 1.00e+0 BA.1.19
V2894 16982G>T missense_variant ORF1ab_pp1ab R5661L 1.00e+0 BA.1.19
V2896 16988G>T missense_variant ORF1ab_pp1ab R5663L 1.00e+0 BA.1.19
V29 -142G>T upstream_gene_variant ORF1ab_pp1a None 1.00e+0 BA.1.19
V2919 17173G>T missense_variant ORF1ab_pp1ab D5725Y 1.00e+0 BA.1.19
V2923 17198G>T missense_variant ORF1ab_pp1ab R5733L 1.00e+0 BA.1.19
V2933 17287G>T stop_gained ORF1ab_pp1ab G5763* 1.00e+0 BA.1.19
V2935 17297G>T missense_variant ORF1ab_pp1ab R5766L 1.00e+0 BA.1.19
V2936 17300G>T missense_variant ORF1ab_pp1ab R5767L 1.00e+0 BA.1.19
V2956 17455G>T missense_variant ORF1ab_pp1ab V5819L 1.00e+0 BA.1.19
V296 551G>T missense_variant ORF1ab_pp1a R184L 1.00e+0 BA.1.19
V2960 17477G>T missense_variant ORF1ab_pp1ab R5826L 1.00e+0 BA.1.19
V297 559G>T missense_variant ORF1ab_pp1a D187Y 1.00e+0 BA.1.19
V2992 17753G>T missense_variant ORF1ab_pp1ab R5918L 1.00e+0 BA.1.19
V3016 17899A>T missense_variant ORF1ab_pp1ab I5967L 1.00e+0 BA.1.19
V3039 18002G>T missense_variant ORF1ab_pp1ab R6001L 1.00e+0 BA.1.19
V3040 18004G>T stop_gained ORF1ab_pp1ab E6002* 1.00e+0 BA.1.19
V3045 18026G>T missense_variant ORF1ab_pp1ab R6009L 1.00e+0 BA.1.19
V3048 18043G>T missense_variant ORF1ab_pp1ab D6015Y 1.00e+0 BA.1.19
V3049 18049G>T stop_gained ORF1ab_pp1ab E6017* 1.00e+0 BA.1.19
V3085 18263G>T missense_variant ORF1ab_pp1ab R6088L 1.00e+0 BA.1.19
V3092 18319G>T missense_variant ORF1ab_pp1ab V6107L 1.00e+0 BA.1.19
V3102 18389G>T missense_variant ORF1ab_pp1ab R6130L 1.00e+0 BA.1.19
V3105 18413G>T missense_variant ORF1ab_pp1ab R6138L 1.00e+0 BA.1.19
V311 620G>T missense_variant ORF1ab_pp1a R207L 1.00e+0 BA.1.19
V3115 18481G>T missense_variant ORF1ab_pp1ab V6161F 1.00e+0 BA.1.19
V3130 18625G>T stop_gained ORF1ab_pp1ab E6209* 1.00e+0 BA.1.19
V3135 18641G>T missense_variant ORF1ab_pp1ab R6214L 1.00e+0 BA.1.19
V3187 18943G>T missense_variant ORF1ab_pp1ab D6315Y 1.00e+0 BA.1.19
V321 649G>T stop_gained ORF1ab_pp1a E217* 1.00e+0 BA.1.19
V3216 19202G>T missense_variant ORF1ab_pp1ab R6401L 1.00e+0 BA.1.19
V3220 19261G>T missense_variant ORF1ab_pp1ab D6421Y 1.00e+0 BA.1.19
V3254 19538G>T missense_variant ORF1ab_pp1ab R6513L 1.00e+0 BA.1.19
V3293 19769G>T missense_variant ORF1ab_pp1ab R6590L 1.00e+0 BA.1.19
V3310 19870G>T missense_variant ORF1ab_pp1ab V6624L 1.00e+0 BA.1.19
V332 695G>T missense_variant ORF1ab_pp1a R232L 1.00e+0 BA.1.19
V3331 20027G>T missense_variant ORF1ab_pp1ab R6676L 1.00e+0 BA.1.19
V3334 20053G>T stop_gained ORF1ab_pp1ab E6685* 1.00e+0 BA.1.19
V3338 20062G>T missense_variant ORF1ab_pp1ab V6688F 1.00e+0 BA.1.19
V3345 20126G>T missense_variant ORF1ab_pp1ab R6709L 1.00e+0 BA.1.19
V336 731G>T missense_variant ORF1ab_pp1a R244L 1.00e+0 BA.1.19
V3415 20527G>T missense_variant ORF1ab_pp1ab A6843S 1.00e+0 BA.1.19
V3428 20683G>T missense_variant ORF1ab_pp1ab D6895Y 1.00e+0 BA.1.19
V3444 20791G>T missense_variant ORF1ab_pp1ab D6931Y 1.00e+0 BA.1.19
V3462 20893G>T missense_variant ORF1ab_pp1ab V6965L 1.00e+0 BA.1.19
V3475 20956G>T missense_variant ORF1ab_pp1ab A6986S 7.07e-1 BA.1.19
V3487 21041G>T missense_variant ORF1ab_pp1ab R7014L 1.00e+0 BA.1.19
V3488 21043G>T stop_gained ORF1ab_pp1ab E7015* 1.00e+0 BA.1.19
V3517 -5G>T upstream_gene_variant S None 1.00e+0 BA.1.19
V3562 101G>T missense_variant S R34L 1.00e+0 BA.1.19
V3581 205_208delCATG frameshift_variant S H69fs 1.00e+0 BA.1.19
V3621 367G>T missense_variant S A123S 1.00e+0 BA.1.19
V370 902G>T missense_variant ORF1ab_pp1a R301L 1.00e+0 BA.1.19
V3737 641G>T missense_variant S R214L 1.00e+0 BA.1.19
V38 -114G>T upstream_gene_variant ORF1ab_pp1a None 1.00e+0 BA.1.19
V3822 1030G>T missense_variant S A344S 1.00e+0 BA.1.19
V3857 1231G>T missense_variant S A411S 1.00e+0 BA.1.19
V3923 1478A>T missense_variant S Q493L 1.00e+0 BA.1.19
V3959 1730G>T missense_variant S R577L 1.00e+0 BA.1.19
V396 1003G>T missense_variant ORF1ab_pp1a D335Y 1.00e+0 BA.1.19
V3985 1901G>T missense_variant S R634L 1.00e+0 BA.1.19
V3991 1937G>T missense_variant S R646L 1.00e+0 BA.1.19
V4005 2014G>T missense_variant S A672S 1.00e+0 BA.1.19
V401 1024G>T stop_gained ORF1ab_pp1a E342* 1.00e+0 BA.1.19
V4025 2045G>T missense_variant S R682L 1.00e+0 BA.1.19
V4026 2048G>T missense_variant S R683L 1.00e+0 BA.1.19
V4029 2054G>T missense_variant S R685L 1.00e+0 BA.1.19
V4065 2294G>T missense_variant S R765L 7.07e-1 BA.1.19
V41 -101G>T upstream_gene_variant ORF1ab_pp1a None 1.00e+0 BA.1.19
V4150 2948G>T missense_variant S R983L 1.00e+0 BA.1.19
V4185 3272G>T missense_variant S R1091L 1.00e+0 BA.1.19
V4235 3554G>T missense_variant S R1185L 1.00e+0 BA.1.19
V4244 3595G>T missense_variant S D1199Y 1.00e+0 BA.1.19
V4289 3778G>T missense_variant S D1260Y 1.00e+0 BA.1.19
V4302 -6G>T upstream_gene_variant ORF3a None 1.00e+0 BA.1.19
V4345 89G>T missense_variant ORF3a R30L 1.00e+0 BA.1.19
V4347 91G>T missense_variant ORF3a A31S 1.00e+0 BA.1.19
V437 1156G>T stop_gained ORF1ab_pp1a E386* 1.00e+0 BA.1.19
V4379 130G>T stop_gained ORF3a G44* 1.00e+0 BA.1.19
V4391 148G>T missense_variant ORF3a V50F 1.00e+0 BA.1.19
V4410 175G>T missense_variant ORF3a A59S 1.00e+0 BA.1.19
V4459 289G>T missense_variant ORF3a V97F 1.00e+0 BA.1.19
V446 1193G>T missense_variant ORF1ab_pp1a R398L 1.00e+0 BA.1.19
V4512 401G>T missense_variant ORF3a R134L 1.00e+0 BA.1.19
V453 1205G>T missense_variant ORF1ab_pp1a R402L 1.00e+0 BA.1.19
V4614 751G>T missense_variant ORF3a G251C 1.00e+0 BA.1.19
V4620 760G>T stop_gained ORF3a G254* 1.00e+0 BA.1.19
V464 1277G>T missense_variant ORF1ab_pp1a R426L 1.00e+0 BA.1.19
V4652 817G>T missense_variant ORF3a V273L 1.00e+0 BA.1.19
V4672 70G>T missense_variant E V24L 1.00e+0 BA.1.19
V4678 145G>T missense_variant E V49L 1.00e+0 BA.1.19
V4685 172G>T missense_variant E V58F 1.00e+0 BA.1.19
V4686 182G>T missense_variant E R61L 1.00e+0 BA.1.19
V469 1285G>T missense_variant ORF1ab_pp1a A429S 1.00e+0 BA.1.19
V4722 16G>T missense_variant M G6C 1.00e+0 BA.1.19
V4763 247G>T missense_variant M A83S 1.00e+0 BA.1.19
V4772 320G>T missense_variant M R107L 1.00e+0 BA.1.19
V48 -92G>T upstream_gene_variant ORF1ab_pp1a None 1.00e+0 BA.1.19
V4800 13G>T missense_variant ORF6 V5F 1.00e+0 BA.1.19
V4812 59G>T missense_variant ORF6 R20M 1.00e+0 BA.1.19
V484 1330G>T stop_gained ORF1ab_pp1a E444* 1.00e+0 BA.1.19
V4844 -4G>T upstream_gene_variant ORF7a None 7.07e-1 BA.1.19
V4864 37G>T missense_variant ORF7a A13S 1.00e+0 BA.1.19
V4895 121G>T stop_gained ORF7a E41* 1.00e+0 BA.1.19
V4930 208G>T missense_variant ORF7a G70C 1.00e+0 BA.1.19
V4932 211G>T missense_variant ORF7a V71L 1.00e+0 BA.1.19
V4937 220G>T missense_variant ORF7a V74F 1.00e+0 BA.1.19
V4943 233G>T missense_variant ORF7a R78L 1.00e+0 BA.1.19
V5056 127G>T missense_variant ORF7b A43S 1.00e+0 BA.1.19
V5061 -4G>T upstream_gene_variant ORF8 None 1.00e+0 BA.1.19
V511 1420G>T missense_variant ORF1ab_pp1a A474S 1.00e+0 BA.1.19
V5144 184G>T missense_variant ORF8 V62L 7.07e-1 BA.1.19
V5173 223G>T missense_variant ORF8 D75Y 1.00e+0 BA.1.19
V5176 229G>T missense_variant ORF8 G77C 1.00e+0 BA.1.19
V5196 302G>T missense_variant ORF8 R101L 1.00e+0 BA.1.19
V5209 340G>T missense_variant ORF8 V114F 1.00e+0 BA.1.19
V5212 344G>T missense_variant ORF8 R115L 1.00e+0 BA.1.19
V5234 -12G>T upstream_gene_variant N None 1.00e+0 BA.1.19
V5266 29G>T missense_variant N R10L 1.00e+0 BA.1.19
V5277 41G>T missense_variant N R14L 1.00e+0 BA.1.19
V5324 107G>T missense_variant N R36L 1.00e+0 BA.1.19
V5331 119G>T missense_variant N R40L 1.00e+0 BA.1.19
V5333 122G>T missense_variant N R41L 1.00e+0 BA.1.19
V5337 163G>T missense_variant N A55S 1.00e+0 BA.1.19
V5345 203G>T missense_variant N R68L 1.00e+0 BA.1.19
V5349 214G>T missense_variant N V72F 1.00e+0 BA.1.19
V5355 263G>T missense_variant N R88L 1.00e+0 BA.1.19
V5359 278G>T missense_variant N R93L 1.00e+0 BA.1.19
V5361 284G>T missense_variant N R95L 1.00e+0 BA.1.19
V5364 295G>T missense_variant N G99C 1.00e+0 BA.1.19
V5379 385G>T missense_variant N G129C 1.00e+0 BA.1.19
V5395 446G>T missense_variant N R149L 1.00e+0 BA.1.19
V5404 472G>T missense_variant N V158L 1.00e+0 BA.1.19
V5414 517G>T missense_variant N A173S 1.00e+0 BA.1.19
V5419 535G>T missense_variant N G179C 1.00e+0 BA.1.19
V5429 554G>T missense_variant N R185L 1.00e+0 BA.1.19
V5434 566G>T missense_variant N R189L 1.00e+0 BA.1.19
V5437 572G>T missense_variant N R191L 1.00e+0 BA.1.19
V5467 611G>T missense_variant N G204V 1.00e+0 BA.1.19
V5496 643G>T missense_variant N G215C 1.00e+0 BA.1.19
V5536 776G>T missense_variant N R259L 1.00e+0 BA.1.19
V5537 785G>T missense_variant N R262L 1.00e+0 BA.1.19
V554 1625G>T missense_variant ORF1ab_pp1a R542L 1.00e+0 BA.1.19
V5546 823G>T missense_variant N G275C 1.00e+0 BA.1.19
V5547 830G>T missense_variant N R277L 1.00e+0 BA.1.19
V556 1634G>T missense_variant ORF1ab_pp1a R545L 1.00e+0 BA.1.19
V5565 931G>T missense_variant N A311S 1.00e+0 BA.1.19
V5566 946G>T stop_gained N G316* 1.00e+0 BA.1.19
V5570 956G>T missense_variant N R319L 1.00e+0 BA.1.19
V5594 1075G>T missense_variant N A359S 7.07e-1 BA.1.19
V563 1649G>T missense_variant ORF1ab_pp1a R550L 1.00e+0 BA.1.19
V5688 16G>T missense_variant ORF10 V6F 1.00e+0 BA.1.19
V5690 22G>T missense_variant ORF10 A8S 1.00e+0 BA.1.19
V5708 71G>T missense_variant ORF10 R24L 1.00e+0 BA.1.19
V574 1679G>T missense_variant ORF1ab_pp1a R560L 1.00e+0 BA.1.19
V5762 *4350G>T downstream_gene_variant S None 1.00e+0 BA.1.19
V5777 *4358G>T downstream_gene_variant S None 1.00e+0 BA.1.19
V5781 *4360G>T downstream_gene_variant S None 1.00e+0 BA.1.19
V5790 *4367G>T downstream_gene_variant S None 1.00e+0 BA.1.19
V5794 *4371G>T downstream_gene_variant S None 1.00e+0 BA.1.19
V581 1696G>T missense_variant ORF1ab_pp1a A566S 1.00e+0 BA.1.19
V5875 222G>T synonymous_variant ORF1ab_pp1a S74S 1.00e+0 BA.1.19
V5970 726G>T synonymous_variant ORF1ab_pp1a T242T 1.00e+0 BA.1.19
V5998 921G>T synonymous_variant ORF1ab_pp1a A307A 1.00e+0 BA.1.19
V6010 999G>T synonymous_variant ORF1ab_pp1a T333T 1.00e+0 BA.1.19
V61 -68G>T upstream_gene_variant ORF1ab_pp1a None 1.00e+0 BA.1.19
V6121 1830G>T synonymous_variant ORF1ab_pp1a S610S 1.00e+0 BA.1.19
V6165 2133G>T synonymous_variant ORF1ab_pp1a T711T 1.00e+0 BA.1.19
V6413 3942G>T synonymous_variant ORF1ab_pp1a A1314A 7.07e-1 BA.1.19
V6420 3990G>T synonymous_variant ORF1ab_pp1a P1330P 1.00e+0 BA.1.19
V643 1933G>T missense_variant ORF1ab_pp1a G645C 1.00e+0 BA.1.19
V6481 4455G>T synonymous_variant ORF1ab_pp1a A1485A 1.00e+0 BA.1.19
V6521 4743G>T synonymous_variant ORF1ab_pp1a T1581T 7.07e-1 BA.1.19
V657 1981G>T missense_variant ORF1ab_pp1a G661C 1.00e+0 BA.1.19
V6610 5364G>T synonymous_variant ORF1ab_pp1a T1788T 1.00e+0 BA.1.19
V6634 5592G>T synonymous_variant ORF1ab_pp1a T1864T 1.00e+0 BA.1.19
V6686 6006G>T synonymous_variant ORF1ab_pp1a T2002T 1.00e+0 BA.1.19
V6704 6099G>T synonymous_variant ORF1ab_pp1a A2033A 1.00e+0 BA.1.19
V6765 6585G>T synonymous_variant ORF1ab_pp1a P2195P 1.00e+0 BA.1.19
V6830 7128G>T synonymous_variant ORF1ab_pp1a P2376P 1.00e+0 BA.1.19
V6859 7410G>T synonymous_variant ORF1ab_pp1a A2470A 1.00e+0 BA.1.19
V6890 7671G>T synonymous_variant ORF1ab_pp1a A2557A 1.00e+0 BA.1.19
V6900 7752G>T synonymous_variant ORF1ab_pp1a A2584A 1.00e+0 BA.1.19
V6908 7791G>T synonymous_variant ORF1ab_pp1a T2597T 1.00e+0 BA.1.19
V6950 8088G>T synonymous_variant ORF1ab_pp1a A2696A 7.07e-1 BA.1.19
V6952 8103G>T synonymous_variant ORF1ab_pp1a A2701A 1.00e+0 BA.1.19
V7125 9537G>T synonymous_variant ORF1ab_pp1a A3179A 1.00e+0 BA.1.19
V7140 9606G>T synonymous_variant ORF1ab_pp1a T3202T 1.00e+0 BA.1.19
V72 -58G>T upstream_gene_variant ORF1ab_pp1a None 1.00e+0 BA.1.19
V7246 10377G>T synonymous_variant ORF1ab_pp1a T3459T 1.00e+0 BA.1.19
V747 2359G>T missense_variant ORF1ab_pp1a G787W 1.00e+0 BA.1.19
V7480 12249G>T synonymous_variant ORF1ab_pp1a T4083T 1.00e+0 BA.1.19
V7502 12504G>T synonymous_variant ORF1ab_pp1a A4168A 1.00e+0 BA.1.19
V752 2374G>T stop_gained ORF1ab_pp1a E792* 1.00e+0 BA.1.19
V7559 12936G>T synonymous_variant ORF1ab_pp1a P4312P 1.00e+0 BA.1.19
V7567 12975G>T synonymous_variant ORF1ab_pp1a S4325S 1.00e+0 BA.1.19
V7602 13194G>T synonymous_variant ORF1ab_pp1a S4398S 1.00e+0 BA.1.19
V7604 13239G>T synonymous_variant ORF1ab_pp1ab P4413P 1.00e+0 BA.1.19
V762 2452G>T missense_variant ORF1ab_pp1a G818C 1.00e+0 BA.1.19
V7677 13854G>T synonymous_variant ORF1ab_pp1ab T4618T 1.00e+0 BA.1.19
V7699 14004G>T synonymous_variant ORF1ab_pp1ab T4668T 1.00e+0 BA.1.19
V7751 14358G>T synonymous_variant ORF1ab_pp1ab T4786T 1.00e+0 BA.1.19
V782 2593G>T missense_variant ORF1ab_pp1a G865C 1.00e+0 BA.1.19
V7846 15108G>T synonymous_variant ORF1ab_pp1ab T5036T 1.00e+0 BA.1.19
V7869 15279G>T synonymous_variant ORF1ab_pp1ab T5093T 1.00e+0 BA.1.19
V787 2614G>T missense_variant ORF1ab_pp1a A872S 1.00e+0 BA.1.19
V7951 15957G>T synonymous_variant ORF1ab_pp1ab P5319P 1.00e+0 BA.1.19
V7974 16113G>T synonymous_variant ORF1ab_pp1ab P5371P 1.00e+0 BA.1.19
V81 -47G>T upstream_gene_variant ORF1ab_pp1a None 1.00e+0 BA.1.19
V8101 17070G>T synonymous_variant ORF1ab_pp1ab T5690T 1.00e+0 BA.1.19
V8145 17415G>T synonymous_variant ORF1ab_pp1ab T5805T 1.00e+0 BA.1.19
V8252 18198G>T synonymous_variant ORF1ab_pp1ab P6066P 1.00e+0 BA.1.19
V8296 18492G>T synonymous_variant ORF1ab_pp1ab P6164P 7.07e-1 BA.1.19
V8328 18696G>T synonymous_variant ORF1ab_pp1ab A6232A 1.00e+0 BA.1.19
V8388 19191G>T synonymous_variant ORF1ab_pp1ab T6397T 1.00e+0 BA.1.19
V8446 19698G>T synonymous_variant ORF1ab_pp1ab T6566T 1.00e+0 BA.1.19
V8502 20205G>T synonymous_variant ORF1ab_pp1ab A6735A 1.00e+0 BA.1.19
V8519 20406G>T synonymous_variant ORF1ab_pp1ab A6802A 1.00e+0 BA.1.19
V8521 20415G>T synonymous_variant ORF1ab_pp1ab P6805P 7.07e-1 BA.1.19
V8547 20667G>T synonymous_variant ORF1ab_pp1ab T6889T 1.00e+0 BA.1.19
V8549 20673G>T synonymous_variant ORF1ab_pp1ab T6891T 1.00e+0 BA.1.19
V8592 20991G>T synonymous_variant ORF1ab_pp1ab A6997A 1.00e+0 BA.1.19
V8678 336G>T synonymous_variant S S112S 1.00e+0 BA.1.19
V8698 489G>T synonymous_variant S A163A 1.00e+0 BA.1.19
V8711 624G>T synonymous_variant S T208T 1.00e+0 BA.1.19
V8721 663G>T synonymous_variant S S221S 1.00e+0 BA.1.19
V8749 906G>T synonymous_variant S T302T 1.00e+0 BA.1.19
V882 2977G>T missense_variant ORF1ab_pp1a G993C 1.00e+0 BA.1.19
V8973 2637G>T synonymous_variant S A879A 1.00e+0 BA.1.19
V9003 2883G>T synonymous_variant S T961T 1.00e+0 BA.1.19
V9151 102G>T synonymous_variant ORF3a T34T 1.00e+0 BA.1.19
V9154 108G>T synonymous_variant ORF3a P36P 1.00e+0 BA.1.19
V9253 801G>T synonymous_variant ORF3a P267P 1.00e+0 BA.1.19
V9254 804G>T synonymous_variant ORF3a T268T 1.00e+0 BA.1.19
V9256 807G>T synonymous_variant ORF3a T269T 1.00e+0 BA.1.19
V9262 18G>T synonymous_variant E S6S 1.00e+0 BA.1.19
V9274 108G>T synonymous_variant E A36A 1.00e+0 BA.1.19
V9330 312G>T synonymous_variant M A104A 1.00e+0 BA.1.19
V9332 318G>T synonymous_variant M T106T 1.00e+0 BA.1.19
V9480 315G>T synonymous_variant ORF7a A105A 1.00e+0 BA.1.19
V9523 108G>T synonymous_variant ORF8 P36P 1.00e+0 BA.1.19
V9550 309G>T synonymous_variant ORF8 S103S 1.00e+0 BA.1.19
V9568 48G>T synonymous_variant N T16T 1.00e+0 BA.1.19
V9582 105G>T synonymous_variant N A35A 1.00e+0 BA.1.19
V9596 150G>T synonymous_variant N A50A 1.00e+0 BA.1.19
V9744 906G>T synonymous_variant N P302P 7.07e-1 BA.1.19
V9758 954G>T synonymous_variant N S318S 7.07e-1 BA.1.19
V9764 981G>T synonymous_variant N S327S 7.07e-1 BA.1.19
V9766 987G>T synonymous_variant N T329T 1.00e+0 BA.1.19
V978 3319G>T stop_gained ORF1ab_pp1a G1107* 1.00e+0 BA.1.19
V9824 30G>T synonymous_variant ORF10 P10P 1.00e+0 BA.1.19
V9825 36G>T synonymous_variant ORF10 T12T 1.00e+0 BA.1.19
V1002 3424G>T stop_gained ORF1ab_pp1a E1142* 1.00e+0 BA.1.21
V1026 3509G>T missense_variant ORF1ab_pp1a R1170L 1.00e+0 BA.1.21
V103 -20G>T upstream_gene_variant ORF1ab_pp1a None 1.00e+0 BA.1.21
V1047 3610G>T missense_variant ORF1ab_pp1a A1204S 1.00e+0 BA.1.21
V111 -10G>T upstream_gene_variant ORF1ab_pp1a None 1.00e+0 BA.1.21
V1133 4127G>T missense_variant ORF1ab_pp1a R1376L 1.00e+0 BA.1.21
V1139 4157G>T missense_variant ORF1ab_pp1a R1386L 1.00e+0 BA.1.21
V1146 4211G>T missense_variant ORF1ab_pp1a R1404L 1.00e+0 BA.1.21
V1159 4318G>T missense_variant ORF1ab_pp1a D1440Y 1.00e+0 BA.1.21
V1164 4391G>T missense_variant ORF1ab_pp1a R1464L 1.00e+0 BA.1.21
V118 28G>T stop_gained ORF1ab_pp1a E10* 1.00e+0 BA.1.21
V120 40G>T missense_variant ORF1ab_pp1a V14F 1.00e+0 BA.1.21
V124 71G>T missense_variant ORF1ab_pp1a R24L 1.00e+0 BA.1.21
V125 73G>T missense_variant ORF1ab_pp1a D25Y 1.00e+0 BA.1.21
V1252 4883G>T missense_variant ORF1ab_pp1a R1628L 1.00e+0 BA.1.21
V126 76G>T missense_variant ORF1ab_pp1a V26L 1.00e+0 BA.1.21
V1298 5248G>T missense_variant ORF1ab_pp1a V1750L 1.00e+0 BA.1.21
V130 82G>T missense_variant ORF1ab_pp1a V28L 1.00e+0 BA.1.21
V132 86G>T missense_variant ORF1ab_pp1a R29L 1.00e+0 BA.1.21
V1345 5548G>T missense_variant ORF1ab_pp1a G1850C 1.00e+0 BA.1.21
V1374 5767G>T missense_variant ORF1ab_pp1a A1923S 1.00e+0 BA.1.21
V139 103G>T missense_variant ORF1ab_pp1a V35L 1.00e+0 BA.1.21
V1409 6032G>T missense_variant ORF1ab_pp1a R2011L 1.00e+0 BA.1.21
V1432 6097G>T missense_variant ORF1ab_pp1a A2033S 1.00e+0 BA.1.21
V1439 6124G>T stop_gained ORF1ab_pp1a E2042* 1.00e+0 BA.1.21
V1458 6181G>T missense_variant ORF1ab_pp1a V2061F 1.00e+0 BA.1.21
V146 128G>T missense_variant ORF1ab_pp1a R43L 1.00e+0 BA.1.21
V1464 6208G>T stop_gained ORF1ab_pp1a E2070* 1.00e+0 BA.1.21
V1544 6476G>T missense_variant ORF1ab_pp1a R2159L 1.00e+0 BA.1.21
V1546 6488G>T missense_variant ORF1ab_pp1a R2163L 1.00e+0 BA.1.21
V1565 6619G>T missense_variant ORF1ab_pp1a G2207C 1.00e+0 BA.1.21
V1578 6742G>T missense_variant ORF1ab_pp1a A2248S 1.00e+0 BA.1.21
V162 178G>T missense_variant ORF1ab_pp1a V60F 1.00e+0 BA.1.21
V1644 7207G>T missense_variant ORF1ab_pp1a G2403C 1.00e+0 BA.1.21
V1649 7244G>T missense_variant ORF1ab_pp1a R2415L 1.00e+0 BA.1.21
V1651 7264G>T stop_gained ORF1ab_pp1a E2422* 1.00e+0 BA.1.21
V1662 7471G>T missense_variant ORF1ab_pp1a V2491F 1.00e+0 BA.1.21
V168 218G>T missense_variant ORF1ab_pp1a R73L 1.00e+0 BA.1.21
V1712 7783G>T missense_variant ORF1ab_pp1a V2595F 1.00e+0 BA.1.21
V1716 7810G>T missense_variant ORF1ab_pp1a V2604L 1.00e+0 BA.1.21
V1743 7913G>T missense_variant ORF1ab_pp1a R2638L 1.00e+0 BA.1.21
V175 230G>T missense_variant ORF1ab_pp1a R77L 1.00e+0 BA.1.21
V1753 8002G>T missense_variant ORF1ab_pp1a D2668Y 1.00e+0 BA.1.21
V1760 8057G>T missense_variant ORF1ab_pp1a R2686L 1.00e+0 BA.1.21
V1766 8090G>T missense_variant ORF1ab_pp1a R2697L 1.00e+0 BA.1.21
V1774 8143G>T missense_variant ORF1ab_pp1a V2715F 1.00e+0 BA.1.21
V1777 8177G>T missense_variant ORF1ab_pp1a R2726L 1.00e+0 BA.1.21
V1778 8189G>T missense_variant ORF1ab_pp1a R2730L 1.00e+0 BA.1.21
V1819 8453G>T missense_variant ORF1ab_pp1a R2818L 1.00e+0 BA.1.21
V1829 8522G>T missense_variant ORF1ab_pp1a R2841L 1.00e+0 BA.1.21
V1846 8596G>T missense_variant ORF1ab_pp1a V2866L 1.00e+0 BA.1.21
V1857 8624G>T missense_variant ORF1ab_pp1a R2875L 1.00e+0 BA.1.21
V1883 8846G>T missense_variant ORF1ab_pp1a R2949L 1.00e+0 BA.1.21
V1886 8858G>T missense_variant ORF1ab_pp1a R2953L 1.00e+0 BA.1.21
V1900 8959G>T missense_variant ORF1ab_pp1a G2987C 1.00e+0 BA.1.21
V1961 9491G>T missense_variant ORF1ab_pp1a R3164L 1.00e+0 BA.1.21
V1964 9581G>T missense_variant ORF1ab_pp1a R3194L 1.00e+0 BA.1.21
V1979 9703G>T missense_variant ORF1ab_pp1a A3235S 1.00e+0 BA.1.21
V1993 9874G>T missense_variant ORF1ab_pp1a G3292C 1.00e+0 BA.1.21
V1997 9892G>T missense_variant ORF1ab_pp1a V3298L 1.00e+0 BA.1.21
V2005 9968G>T missense_variant ORF1ab_pp1a R3323L 1.00e+0 BA.1.21
V2030 10103G>T missense_variant ORF1ab_pp1a R3368L 1.00e+0 BA.1.21
V2055 10417G>T missense_variant ORF1ab_pp1a A3473S 1.00e+0 BA.1.21
V2060 10454G>T missense_variant ORF1ab_pp1a R3485L 1.00e+0 BA.1.21
V207 277G>T stop_gained ORF1ab_pp1a E93* 1.00e+0 BA.1.21
V2079 10570G>T missense_variant ORF1ab_pp1a V3524F 1.00e+0 BA.1.21
V2087 10625G>T missense_variant ORF1ab_pp1a R3542L 1.00e+0 BA.1.21
V212 292G>T missense_variant ORF1ab_pp1a G98C 1.00e+0 BA.1.21
V215 296G>T missense_variant ORF1ab_pp1a R99L 1.00e+0 BA.1.21
V2151 10985G>T missense_variant ORF1ab_pp1a R3662L 1.00e+0 BA.1.21
V2188 11152G>T missense_variant ORF1ab_pp1a V3718F 1.00e+0 BA.1.21
V2238 11405G>T missense_variant ORF1ab_pp1a R3802L 1.00e+0 BA.1.21
V228 337G>T stop_gained ORF1ab_pp1a E113* 1.00e+0 BA.1.21
V2310 11978G>T missense_variant ORF1ab_pp1a R3993L 1.00e+0 BA.1.21
V2313 11996G>T missense_variant ORF1ab_pp1a R3999L 1.00e+0 BA.1.21
V2358 12449G>T missense_variant ORF1ab_pp1a R4150L 1.00e+0 BA.1.21
V2362 12469G>T missense_variant ORF1ab_pp1a G4157C 1.00e+0 BA.1.21
V2386 12559G>T missense_variant ORF1ab_pp1a D4187Y 1.00e+0 BA.1.21
V239 356G>T missense_variant ORF1ab_pp1a R119L 1.00e+0 BA.1.21
V2406 12752G>T missense_variant ORF1ab_pp1a R4251L 1.00e+0 BA.1.21
V2424 12992G>T missense_variant ORF1ab_pp1a R4331L 1.00e+0 BA.1.21
V243 371G>T missense_variant ORF1ab_pp1a R124L 1.00e+0 BA.1.21
V2438 13114G>T missense_variant ORF1ab_pp1a V4372F 1.00e+0 BA.1.21
V2439 13120G>T missense_variant ORF1ab_pp1a G4374C 1.00e+0 BA.1.21
V2445 13160G>T missense_variant ORF1ab_pp1a R4387L 1.00e+0 BA.1.21
V2446 13162G>T stop_gained ORF1ab_pp1a E4388* 1.00e+0 BA.1.21
V245 379G>T missense_variant ORF1ab_pp1a G127C 1.00e+0 BA.1.21
V2452 13204G>T missense_variant ORF1ab_pp1a G4402W 1.00e+0 BA.1.21
V2453 13213G>T missense_variant ORF1ab_pp1ab G4405C 1.00e+0 BA.1.21
V2456 13229G>T missense_variant ORF1ab_pp1ab R4410L 1.00e+0 BA.1.21
V2459 13243G>T missense_variant ORF1ab_pp1ab G4415C 1.00e+0 BA.1.21
V2463 13267G>T missense_variant ORF1ab_pp1ab V4423L 1.00e+0 BA.1.21
V2470 13340G>T missense_variant ORF1ab_pp1ab R4447L 1.00e+0 BA.1.21
V2474 13357G>T stop_gained ORF1ab_pp1ab E4453* 1.00e+0 BA.1.21
V2496 13498G>T missense_variant ORF1ab_pp1ab G4500C 1.00e+0 BA.1.21
V2500 13523G>T missense_variant ORF1ab_pp1ab R4508L 1.00e+0 BA.1.21
V2503 13529G>T missense_variant ORF1ab_pp1ab R4510L 1.00e+0 BA.1.21
V2507 13558G>T missense_variant ORF1ab_pp1ab V4520F 1.00e+0 BA.1.21
V251 409G>T missense_variant ORF1ab_pp1a G137C 1.00e+0 BA.1.21
V2528 13694G>T missense_variant ORF1ab_pp1ab R4565L 1.00e+0 BA.1.21
V2529 13696G>T missense_variant ORF1ab_pp1ab V4566L 1.00e+0 BA.1.21
V2532 13702G>T missense_variant ORF1ab_pp1ab A4568S 1.00e+0 BA.1.21
V2534 13718G>T missense_variant ORF1ab_pp1ab R4573L 7.07e-1 BA.1.21
V2535 13724G>T missense_variant ORF1ab_pp1ab R4575L 1.00e+0 BA.1.21
V2540 13766G>T missense_variant ORF1ab_pp1ab R4589L 1.00e+0 BA.1.21
V2543 13834G>T missense_variant ORF1ab_pp1ab G4612C 1.00e+0 BA.1.21
V255 412G>T missense_variant ORF1ab_pp1a A138S 1.00e+0 BA.1.21
V257 415G>T missense_variant ORF1ab_pp1a D139Y 1.00e+0 BA.1.21
V2584 14030G>T missense_variant ORF1ab_pp1ab R4677L 1.00e+0 BA.1.21
V2612 14320G>T missense_variant ORF1ab_pp1ab A4774S 1.00e+0 BA.1.21
V2615 14351G>T missense_variant ORF1ab_pp1ab R4784L 1.00e+0 BA.1.21
V2620 14413G>T missense_variant ORF1ab_pp1ab G4805C 1.00e+0 BA.1.21
V2631 14530G>T missense_variant ORF1ab_pp1ab D4844Y 1.00e+0 BA.1.21
V2632 14546G>T missense_variant ORF1ab_pp1ab R4849L 1.00e+0 BA.1.21
V2641 14659G>T missense_variant ORF1ab_pp1ab V4887F 1.00e+0 BA.1.21
V2652 14761G>T missense_variant ORF1ab_pp1ab A4921S 1.00e+0 BA.1.21
V2654 14774G>T missense_variant ORF1ab_pp1ab R4925L 1.00e+0 BA.1.21
V2656 14840G>T missense_variant ORF1ab_pp1ab R4947L 1.00e+0 BA.1.21
V2657 14845G>T missense_variant ORF1ab_pp1ab V4949L 1.00e+0 BA.1.21
V2660 14917G>T missense_variant ORF1ab_pp1ab A4973S 1.00e+0 BA.1.21
V2680 15095G>T missense_variant ORF1ab_pp1ab R5032L 1.00e+0 BA.1.21
V2687 15128G>T missense_variant ORF1ab_pp1ab R5043L 1.00e+0 BA.1.21
V269 439G>T missense_variant ORF1ab_pp1a D147Y 1.00e+0 BA.1.21
V2695 15187G>T missense_variant ORF1ab_pp1ab G5063C 1.00e+0 BA.1.21
V270 442G>T stop_gained ORF1ab_pp1a E148* 1.00e+0 BA.1.21
V2702 15325G>T missense_variant ORF1ab_pp1ab D5109Y 1.00e+0 BA.1.21
V2706 15338G>T missense_variant ORF1ab_pp1ab R5113L 1.00e+0 BA.1.21
V2715 15415G>T missense_variant ORF1ab_pp1ab A5139S 1.00e+0 BA.1.21
V2716 15425G>T missense_variant ORF1ab_pp1ab R5142L 1.00e+0 BA.1.21
V2719 15457G>T missense_variant ORF1ab_pp1ab D5153Y 1.00e+0 BA.1.21
V2743 15697G>T missense_variant ORF1ab_pp1ab G5233C 1.00e+0 BA.1.21
V2745 15718G>T missense_variant ORF1ab_pp1ab V5240L 1.00e+0 BA.1.21
V2746 15749G>T missense_variant ORF1ab_pp1ab R5250L 1.00e+0 BA.1.21
V2747 15754G>T missense_variant ORF1ab_pp1ab V5252L 1.00e+0 BA.1.21
V2772 16034G>T missense_variant ORF1ab_pp1ab R5345L 1.00e+0 BA.1.21
V2796 16273G>T missense_variant ORF1ab_pp1ab D5425Y 1.00e+0 BA.1.21
V2812 16436G>T missense_variant ORF1ab_pp1ab R5479L 1.00e+0 BA.1.21
V2822 16505G>T missense_variant ORF1ab_pp1ab R5502L 1.00e+0 BA.1.21
V2823 16529G>T missense_variant ORF1ab_pp1ab R5510L 1.00e+0 BA.1.21
V2834 16607G>T missense_variant ORF1ab_pp1ab R5536L 1.00e+0 BA.1.21
V285 512G>T missense_variant ORF1ab_pp1a R171L 1.00e+0 BA.1.21
V287 524G>T missense_variant ORF1ab_pp1a R175L 1.00e+0 BA.1.21
V2880 16880G>T missense_variant ORF1ab_pp1ab R5627L 1.00e+0 BA.1.21
V2884 16909G>T missense_variant ORF1ab_pp1ab A5637S 1.00e+0 BA.1.21
V289 535G>T stop_gained ORF1ab_pp1a G179* 1.00e+0 BA.1.21
V2894 16982G>T missense_variant ORF1ab_pp1ab R5661L 1.00e+0 BA.1.21
V2896 16988G>T missense_variant ORF1ab_pp1ab R5663L 1.00e+0 BA.1.21
V2919 17173G>T missense_variant ORF1ab_pp1ab D5725Y 1.00e+0 BA.1.21
V2923 17198G>T missense_variant ORF1ab_pp1ab R5733L 1.00e+0 BA.1.21
V2933 17287G>T stop_gained ORF1ab_pp1ab G5763* 1.00e+0 BA.1.21
V2935 17297G>T missense_variant ORF1ab_pp1ab R5766L 1.00e+0 BA.1.21
V2936 17300G>T missense_variant ORF1ab_pp1ab R5767L 1.00e+0 BA.1.21
V2956 17455G>T missense_variant ORF1ab_pp1ab V5819L 1.00e+0 BA.1.21
V296 551G>T missense_variant ORF1ab_pp1a R184L 1.00e+0 BA.1.21
V2960 17477G>T missense_variant ORF1ab_pp1ab R5826L 1.00e+0 BA.1.21
V297 559G>T missense_variant ORF1ab_pp1a D187Y 1.00e+0 BA.1.21
V2992 17753G>T missense_variant ORF1ab_pp1ab R5918L 1.00e+0 BA.1.21
V3016 17899A>T missense_variant ORF1ab_pp1ab I5967L 1.00e+0 BA.1.21
V3039 18002G>T missense_variant ORF1ab_pp1ab R6001L 1.00e+0 BA.1.21
V3040 18004G>T stop_gained ORF1ab_pp1ab E6002* 1.00e+0 BA.1.21
V3045 18026G>T missense_variant ORF1ab_pp1ab R6009L 1.00e+0 BA.1.21
V3048 18043G>T missense_variant ORF1ab_pp1ab D6015Y 1.00e+0 BA.1.21
V3049 18049G>T stop_gained ORF1ab_pp1ab E6017* 1.00e+0 BA.1.21
V3085 18263G>T missense_variant ORF1ab_pp1ab R6088L 1.00e+0 BA.1.21
V3092 18319G>T missense_variant ORF1ab_pp1ab V6107L 1.00e+0 BA.1.21
V3102 18389G>T missense_variant ORF1ab_pp1ab R6130L 1.00e+0 BA.1.21
V3105 18413G>T missense_variant ORF1ab_pp1ab R6138L 1.00e+0 BA.1.21
V311 620G>T missense_variant ORF1ab_pp1a R207L 1.00e+0 BA.1.21
V3115 18481G>T missense_variant ORF1ab_pp1ab V6161F 1.00e+0 BA.1.21
V3130 18625G>T stop_gained ORF1ab_pp1ab E6209* 1.00e+0 BA.1.21
V3135 18641G>T missense_variant ORF1ab_pp1ab R6214L 1.00e+0 BA.1.21
V3187 18943G>T missense_variant ORF1ab_pp1ab D6315Y 1.00e+0 BA.1.21
V321 649G>T stop_gained ORF1ab_pp1a E217* 1.00e+0 BA.1.21
V3216 19202G>T missense_variant ORF1ab_pp1ab R6401L 1.00e+0 BA.1.21
V3220 19261G>T missense_variant ORF1ab_pp1ab D6421Y 1.00e+0 BA.1.21
V3254 19538G>T missense_variant ORF1ab_pp1ab R6513L 1.00e+0 BA.1.21
V3293 19769G>T missense_variant ORF1ab_pp1ab R6590L 1.00e+0 BA.1.21
V3310 19870G>T missense_variant ORF1ab_pp1ab V6624L 1.00e+0 BA.1.21
V332 695G>T missense_variant ORF1ab_pp1a R232L 1.00e+0 BA.1.21
V3331 20027G>T missense_variant ORF1ab_pp1ab R6676L 1.00e+0 BA.1.21
V3334 20053G>T stop_gained ORF1ab_pp1ab E6685* 1.00e+0 BA.1.21
V3338 20062G>T missense_variant ORF1ab_pp1ab V6688F 1.00e+0 BA.1.21
V3345 20126G>T missense_variant ORF1ab_pp1ab R6709L 1.00e+0 BA.1.21
V336 731G>T missense_variant ORF1ab_pp1a R244L 1.00e+0 BA.1.21
V3415 20527G>T missense_variant ORF1ab_pp1ab A6843S 1.00e+0 BA.1.21
V3428 20683G>T missense_variant ORF1ab_pp1ab D6895Y 1.00e+0 BA.1.21
V3444 20791G>T missense_variant ORF1ab_pp1ab D6931Y 1.00e+0 BA.1.21
V3462 20893G>T missense_variant ORF1ab_pp1ab V6965L 1.00e+0 BA.1.21
V3475 20956G>T missense_variant ORF1ab_pp1ab A6986S 1.00e+0 BA.1.21
V3487 21041G>T missense_variant ORF1ab_pp1ab R7014L 1.00e+0 BA.1.21
V3488 21043G>T stop_gained ORF1ab_pp1ab E7015* 1.00e+0 BA.1.21
V3517 -5G>T upstream_gene_variant S None 1.00e+0 BA.1.21
V3562 101G>T missense_variant S R34L 1.00e+0 BA.1.21
V3621 367G>T missense_variant S A123S 1.00e+0 BA.1.21
V370 902G>T missense_variant ORF1ab_pp1a R301L 1.00e+0 BA.1.21
V3737 641G>T missense_variant S R214L 1.00e+0 BA.1.21
V3822 1030G>T missense_variant S A344S 1.00e+0 BA.1.21
V3959 1730G>T missense_variant S R577L 1.00e+0 BA.1.21
V396 1003G>T missense_variant ORF1ab_pp1a D335Y 1.00e+0 BA.1.21
V3985 1901G>T missense_variant S R634L 1.00e+0 BA.1.21
V3991 1937G>T missense_variant S R646L 7.07e-1 BA.1.21
V4005 2014G>T missense_variant S A672S 1.00e+0 BA.1.21
V401 1024G>T stop_gained ORF1ab_pp1a E342* 1.00e+0 BA.1.21
V4025 2045G>T missense_variant S R682L 1.00e+0 BA.1.21
V4026 2048G>T missense_variant S R683L 1.00e+0 BA.1.21
V4029 2054G>T missense_variant S R685L 1.00e+0 BA.1.21
V41 -101G>T upstream_gene_variant ORF1ab_pp1a None 1.00e+0 BA.1.21
V4150 2948G>T missense_variant S R983L 1.00e+0 BA.1.21
V4185 3272G>T missense_variant S R1091L 1.00e+0 BA.1.21
V4235 3554G>T missense_variant S R1185L 1.00e+0 BA.1.21
V4244 3595G>T missense_variant S D1199Y 1.00e+0 BA.1.21
V4289 3778G>T missense_variant S D1260Y 1.00e+0 BA.1.21
V4302 -6G>T upstream_gene_variant ORF3a None 1.00e+0 BA.1.21
V4345 89G>T missense_variant ORF3a R30L 1.00e+0 BA.1.21
V4347 91G>T missense_variant ORF3a A31S 1.00e+0 BA.1.21
V437 1156G>T stop_gained ORF1ab_pp1a E386* 1.00e+0 BA.1.21
V4379 130G>T stop_gained ORF3a G44* 1.00e+0 BA.1.21
V4391 148G>T missense_variant ORF3a V50F 1.00e+0 BA.1.21
V4410 175G>T missense_variant ORF3a A59S 1.00e+0 BA.1.21
V4459 289G>T missense_variant ORF3a V97F 1.00e+0 BA.1.21
V446 1193G>T missense_variant ORF1ab_pp1a R398L 1.00e+0 BA.1.21
V4512 401G>T missense_variant ORF3a R134L 1.00e+0 BA.1.21
V4524 463G>T missense_variant ORF3a D155Y 1.00e+0 BA.1.21
V453 1205G>T missense_variant ORF1ab_pp1a R402L 1.00e+0 BA.1.21
V4614 751G>T missense_variant ORF3a G251C 1.00e+0 BA.1.21
V4620 760G>T stop_gained ORF3a G254* 1.00e+0 BA.1.21
V464 1277G>T missense_variant ORF1ab_pp1a R426L 1.00e+0 BA.1.21
V4652 817G>T missense_variant ORF3a V273L 1.00e+0 BA.1.21
V4672 70G>T missense_variant E V24L 1.00e+0 BA.1.21
V469 1285G>T missense_variant ORF1ab_pp1a A429S 1.00e+0 BA.1.21
V48 -92G>T upstream_gene_variant ORF1ab_pp1a None 1.00e+0 BA.1.21
V4812 59G>T missense_variant ORF6 R20M 1.00e+0 BA.1.21
V484 1330G>T stop_gained ORF1ab_pp1a E444* 1.00e+0 BA.1.21
V4844 -4G>T upstream_gene_variant ORF7a None 7.07e-1 BA.1.21
V4864 37G>T missense_variant ORF7a A13S 1.00e+0 BA.1.21
V4895 121G>T stop_gained ORF7a E41* 1.00e+0 BA.1.21
V4930 208G>T missense_variant ORF7a G70C 1.00e+0 BA.1.21
V4932 211G>T missense_variant ORF7a V71L 1.00e+0 BA.1.21
V4937 220G>T missense_variant ORF7a V74F 1.00e+0 BA.1.21
V4943 233G>T missense_variant ORF7a R78L 7.07e-1 BA.1.21
V5056 127G>T missense_variant ORF7b A43S 1.00e+0 BA.1.21
V5061 -4G>T upstream_gene_variant ORF8 None 1.00e+0 BA.1.21
V511 1420G>T missense_variant ORF1ab_pp1a A474S 1.00e+0 BA.1.21
V5173 223G>T missense_variant ORF8 D75Y 1.00e+0 BA.1.21
V5176 229G>T missense_variant ORF8 G77C 1.00e+0 BA.1.21
V5196 302G>T missense_variant ORF8 R101L 1.00e+0 BA.1.21
V5209 340G>T missense_variant ORF8 V114F 1.00e+0 BA.1.21
V5212 344G>T missense_variant ORF8 R115L 1.00e+0 BA.1.21
V5234 -12G>T upstream_gene_variant N None 1.00e+0 BA.1.21
V5266 29G>T missense_variant N R10L 1.00e+0 BA.1.21
V5277 41G>T missense_variant N R14L 1.00e+0 BA.1.21
V5307 92_98delAACGCAG frameshift_variant N E31fs 1.00e+0 BA.1.21
V5324 107G>T missense_variant N R36L 1.00e+0 BA.1.21
V5331 119G>T missense_variant N R40L 7.07e-1 BA.1.21
V5333 122G>T missense_variant N R41L 1.00e+0 BA.1.21
V5337 163G>T missense_variant N A55S 1.00e+0 BA.1.21
V5345 203G>T missense_variant N R68L 1.00e+0 BA.1.21
V5349 214G>T missense_variant N V72F 1.00e+0 BA.1.21
V5355 263G>T missense_variant N R88L 1.00e+0 BA.1.21
V5359 278G>T missense_variant N R93L 7.07e-1 BA.1.21
V5361 284G>T missense_variant N R95L 1.00e+0 BA.1.21
V5364 295G>T missense_variant N G99C 1.00e+0 BA.1.21
V5379 385G>T missense_variant N G129C 1.00e+0 BA.1.21
V5395 446G>T missense_variant N R149L 1.00e+0 BA.1.21
V5404 472G>T missense_variant N V158L 1.00e+0 BA.1.21
V5414 517G>T missense_variant N A173S 1.00e+0 BA.1.21
V5419 535G>T missense_variant N G179C 1.00e+0 BA.1.21
V5429 554G>T missense_variant N R185L 7.07e-1 BA.1.21
V5434 566G>T missense_variant N R189L 1.00e+0 BA.1.21
V5437 572G>T missense_variant N R191L 1.00e+0 BA.1.21
V5467 611G>T missense_variant N G204V 1.00e+0 BA.1.21
V5496 643G>T missense_variant N G215C 1.00e+0 BA.1.21
V5536 776G>T missense_variant N R259L 1.00e+0 BA.1.21
V5537 785G>T missense_variant N R262L 1.00e+0 BA.1.21
V554 1625G>T missense_variant ORF1ab_pp1a R542L 1.00e+0 BA.1.21
V5546 823G>T missense_variant N G275C 1.00e+0 BA.1.21
V5547 830G>T missense_variant N R277L 1.00e+0 BA.1.21
V556 1634G>T missense_variant ORF1ab_pp1a R545L 1.00e+0 BA.1.21
V5565 931G>T missense_variant N A311S 1.00e+0 BA.1.21
V5566 946G>T stop_gained N G316* 1.00e+0 BA.1.21
V5570 956G>T missense_variant N R319L 1.00e+0 BA.1.21
V5594 1075G>T missense_variant N A359S 1.00e+0 BA.1.21
V563 1649G>T missense_variant ORF1ab_pp1a R550L 1.00e+0 BA.1.21
V5688 16G>T missense_variant ORF10 V6F 1.00e+0 BA.1.21
V5690 22G>T missense_variant ORF10 A8S 1.00e+0 BA.1.21
V5708 71G>T missense_variant ORF10 R24L 1.00e+0 BA.1.21
V574 1679G>T missense_variant ORF1ab_pp1a R560L 1.00e+0 BA.1.21
V5762 *4350G>T downstream_gene_variant S None 1.00e+0 BA.1.21
V5777 *4358G>T downstream_gene_variant S None 7.07e-1 BA.1.21
V5781 *4360G>T downstream_gene_variant S None 1.00e+0 BA.1.21
V5790 *4367G>T downstream_gene_variant S None 1.00e+0 BA.1.21
V5794 *4371G>T downstream_gene_variant S None 7.07e-1 BA.1.21
V581 1696G>T missense_variant ORF1ab_pp1a A566S 1.00e+0 BA.1.21
V5875 222G>T synonymous_variant ORF1ab_pp1a S74S 1.00e+0 BA.1.21
V5970 726G>T synonymous_variant ORF1ab_pp1a T242T 1.00e+0 BA.1.21
V5998 921G>T synonymous_variant ORF1ab_pp1a A307A 1.00e+0 BA.1.21
V6010 999G>T synonymous_variant ORF1ab_pp1a T333T 1.00e+0 BA.1.21
V61 -68G>T upstream_gene_variant ORF1ab_pp1a None 1.00e+0 BA.1.21
V6121 1830G>T synonymous_variant ORF1ab_pp1a S610S 1.00e+0 BA.1.21
V631 1879G>T missense_variant ORF1ab_pp1a V627F 1.00e+0 BA.1.21
V6413 3942G>T synonymous_variant ORF1ab_pp1a A1314A 1.00e+0 BA.1.21
V6420 3990G>T synonymous_variant ORF1ab_pp1a P1330P 1.00e+0 BA.1.21
V643 1933G>T missense_variant ORF1ab_pp1a G645C 1.00e+0 BA.1.21
V6481 4455G>T synonymous_variant ORF1ab_pp1a A1485A 1.00e+0 BA.1.21
V6521 4743G>T synonymous_variant ORF1ab_pp1a T1581T 1.00e+0 BA.1.21
V657 1981G>T missense_variant ORF1ab_pp1a G661C 1.00e+0 BA.1.21
V6610 5364G>T synonymous_variant ORF1ab_pp1a T1788T 1.00e+0 BA.1.21
V6634 5592G>T synonymous_variant ORF1ab_pp1a T1864T 1.00e+0 BA.1.21
V6686 6006G>T synonymous_variant ORF1ab_pp1a T2002T 1.00e+0 BA.1.21
V6695 6072G>T synonymous_variant ORF1ab_pp1a S2024S 1.00e+0 BA.1.21
V6704 6099G>T synonymous_variant ORF1ab_pp1a A2033A 1.00e+0 BA.1.21
V6830 7128G>T synonymous_variant ORF1ab_pp1a P2376P 1.00e+0 BA.1.21
V6859 7410G>T synonymous_variant ORF1ab_pp1a A2470A 1.00e+0 BA.1.21
V6890 7671G>T synonymous_variant ORF1ab_pp1a A2557A 7.07e-1 BA.1.21
V69 -62G>T upstream_gene_variant ORF1ab_pp1a None 1.00e+0 BA.1.21
V6900 7752G>T synonymous_variant ORF1ab_pp1a A2584A 1.00e+0 BA.1.21
V6908 7791G>T synonymous_variant ORF1ab_pp1a T2597T 1.00e+0 BA.1.21
V6950 8088G>T synonymous_variant ORF1ab_pp1a A2696A 1.00e+0 BA.1.21
V6952 8103G>T synonymous_variant ORF1ab_pp1a A2701A 1.00e+0 BA.1.21
V7125 9537G>T synonymous_variant ORF1ab_pp1a A3179A 1.00e+0 BA.1.21
V7140 9606G>T synonymous_variant ORF1ab_pp1a T3202T 1.00e+0 BA.1.21
V7246 10377G>T synonymous_variant ORF1ab_pp1a T3459T 7.07e-1 BA.1.21
V747 2359G>T missense_variant ORF1ab_pp1a G787W 1.00e+0 BA.1.21
V7480 12249G>T synonymous_variant ORF1ab_pp1a T4083T 1.00e+0 BA.1.21
V7502 12504G>T synonymous_variant ORF1ab_pp1a A4168A 1.00e+0 BA.1.21
V752 2374G>T stop_gained ORF1ab_pp1a E792* 1.00e+0 BA.1.21
V7559 12936G>T synonymous_variant ORF1ab_pp1a P4312P 7.07e-1 BA.1.21
V7567 12975G>T synonymous_variant ORF1ab_pp1a S4325S 1.00e+0 BA.1.21
V7604 13239G>T synonymous_variant ORF1ab_pp1ab P4413P 1.00e+0 BA.1.21
V762 2452G>T missense_variant ORF1ab_pp1a G818C 1.00e+0 BA.1.21
V7677 13854G>T synonymous_variant ORF1ab_pp1ab T4618T 1.00e+0 BA.1.21
V7699 14004G>T synonymous_variant ORF1ab_pp1ab T4668T 1.00e+0 BA.1.21
V7751 14358G>T synonymous_variant ORF1ab_pp1ab T4786T 1.00e+0 BA.1.21
V782 2593G>T missense_variant ORF1ab_pp1a G865C 1.00e+0 BA.1.21
V7846 15108G>T synonymous_variant ORF1ab_pp1ab T5036T 1.00e+0 BA.1.21
V787 2614G>T missense_variant ORF1ab_pp1a A872S 1.00e+0 BA.1.21
V7951 15957G>T synonymous_variant ORF1ab_pp1ab P5319P 1.00e+0 BA.1.21
V7974 16113G>T synonymous_variant ORF1ab_pp1ab P5371P 1.00e+0 BA.1.21
V8011 16383G>T synonymous_variant ORF1ab_pp1ab T5461T 7.07e-1 BA.1.21
V81 -47G>T upstream_gene_variant ORF1ab_pp1a None 1.00e+0 BA.1.21
V8101 17070G>T synonymous_variant ORF1ab_pp1ab T5690T 1.00e+0 BA.1.21
V8145 17415G>T synonymous_variant ORF1ab_pp1ab T5805T 1.00e+0 BA.1.21
V8252 18198G>T synonymous_variant ORF1ab_pp1ab P6066P 1.00e+0 BA.1.21
V8296 18492G>T synonymous_variant ORF1ab_pp1ab P6164P 1.00e+0 BA.1.21
V8328 18696G>T synonymous_variant ORF1ab_pp1ab A6232A 7.07e-1 BA.1.21
V8388 19191G>T synonymous_variant ORF1ab_pp1ab T6397T 1.00e+0 BA.1.21
V8502 20205G>T synonymous_variant ORF1ab_pp1ab A6735A 1.00e+0 BA.1.21
V8519 20406G>T synonymous_variant ORF1ab_pp1ab A6802A 1.00e+0 BA.1.21
V8521 20415G>T synonymous_variant ORF1ab_pp1ab P6805P 1.00e+0 BA.1.21
V8547 20667G>T synonymous_variant ORF1ab_pp1ab T6889T 1.00e+0 BA.1.21
V8549 20673G>T synonymous_variant ORF1ab_pp1ab T6891T 1.00e+0 BA.1.21
V8592 20991G>T synonymous_variant ORF1ab_pp1ab A6997A 1.00e+0 BA.1.21
V8678 336G>T synonymous_variant S S112S 7.07e-1 BA.1.21
V8698 489G>T synonymous_variant S A163A 1.00e+0 BA.1.21
V8711 624G>T synonymous_variant S T208T 1.00e+0 BA.1.21
V8721 663G>T synonymous_variant S S221S 7.07e-1 BA.1.21
V8749 906G>T synonymous_variant S T302T 7.07e-1 BA.1.21
V882 2977G>T missense_variant ORF1ab_pp1a G993C 1.00e+0 BA.1.21
V8973 2637G>T synonymous_variant S A879A 1.00e+0 BA.1.21
V9003 2883G>T synonymous_variant S T961T 1.00e+0 BA.1.21
V9151 102G>T synonymous_variant ORF3a T34T 7.07e-1 BA.1.21
V9154 108G>T synonymous_variant ORF3a P36P 1.00e+0 BA.1.21
V9253 801G>T synonymous_variant ORF3a P267P 7.07e-1 BA.1.21
V9254 804G>T synonymous_variant ORF3a T268T 1.00e+0 BA.1.21
V9256 807G>T synonymous_variant ORF3a T269T 1.00e+0 BA.1.21
V9262 18G>T synonymous_variant E S6S 1.00e+0 BA.1.21
V9480 315G>T synonymous_variant ORF7a A105A 1.00e+0 BA.1.21
V9550 309G>T synonymous_variant ORF8 S103S 1.00e+0 BA.1.21
V9568 48G>T synonymous_variant N T16T 1.00e+0 BA.1.21
V9582 105G>T synonymous_variant N A35A 7.07e-1 BA.1.21
V9744 906G>T synonymous_variant N P302P 1.00e+0 BA.1.21
V9753 939G>T synonymous_variant N A313A 1.00e+0 BA.1.21
V9766 987G>T synonymous_variant N T329T 1.00e+0 BA.1.21
V978 3319G>T stop_gained ORF1ab_pp1a G1107* 1.00e+0 BA.1.21
V9824 30G>T synonymous_variant ORF10 P10P 1.00e+0 BA.1.21
V9825 36G>T synonymous_variant ORF10 T12T 1.00e+0 BA.1.21
V988 3355G>T missense_variant ORF1ab_pp1a G1119C 1.00e+0 BA.1.21
V1002 3424G>T stop_gained ORF1ab_pp1a E1142* 1.00e+0 BA.2.10.1
V1026 3509G>T missense_variant ORF1ab_pp1a R1170L 1.00e+0 BA.2.10.1
V103 -20G>T upstream_gene_variant ORF1ab_pp1a None 1.00e+0 BA.2.10.1
V1047 3610G>T missense_variant ORF1ab_pp1a A1204S 1.00e+0 BA.2.10.1
V11 -194G>T upstream_gene_variant ORF1ab_pp1a None 1.00e+0 BA.2.10.1
V111 -10G>T upstream_gene_variant ORF1ab_pp1a None 1.00e+0 BA.2.10.1
V1133 4127G>T missense_variant ORF1ab_pp1a R1376L 1.00e+0 BA.2.10.1
V1139 4157G>T missense_variant ORF1ab_pp1a R1386L 1.00e+0 BA.2.10.1
V1146 4211G>T missense_variant ORF1ab_pp1a R1404L 1.00e+0 BA.2.10.1
V1159 4318G>T missense_variant ORF1ab_pp1a D1440Y 1.00e+0 BA.2.10.1
V1164 4391G>T missense_variant ORF1ab_pp1a R1464L 1.00e+0 BA.2.10.1
V118 28G>T stop_gained ORF1ab_pp1a E10* 1.00e+0 BA.2.10.1
V120 40G>T missense_variant ORF1ab_pp1a V14F 1.00e+0 BA.2.10.1
V124 71G>T missense_variant ORF1ab_pp1a R24L 1.00e+0 BA.2.10.1
V125 73G>T missense_variant ORF1ab_pp1a D25Y 1.00e+0 BA.2.10.1
V1252 4883G>T missense_variant ORF1ab_pp1a R1628L 1.00e+0 BA.2.10.1
V126 76G>T missense_variant ORF1ab_pp1a V26L 1.00e+0 BA.2.10.1
V1298 5248G>T missense_variant ORF1ab_pp1a V1750L 8.16e-1 BA.2.10.1
V130 82G>T missense_variant ORF1ab_pp1a V28L 1.00e+0 BA.2.10.1
V132 86G>T missense_variant ORF1ab_pp1a R29L 1.00e+0 BA.2.10.1
V1345 5548G>T missense_variant ORF1ab_pp1a G1850C 1.00e+0 BA.2.10.1
V1374 5767G>T missense_variant ORF1ab_pp1a A1923S 1.00e+0 BA.2.10.1
V139 103G>T missense_variant ORF1ab_pp1a V35L 1.00e+0 BA.2.10.1
V1409 6032G>T missense_variant ORF1ab_pp1a R2011L 1.00e+0 BA.2.10.1
V1432 6097G>T missense_variant ORF1ab_pp1a A2033S 1.00e+0 BA.2.10.1
V1439 6124G>T stop_gained ORF1ab_pp1a E2042* 1.00e+0 BA.2.10.1
V1458 6181G>T missense_variant ORF1ab_pp1a V2061F 1.00e+0 BA.2.10.1
V146 128G>T missense_variant ORF1ab_pp1a R43L 1.00e+0 BA.2.10.1
V1464 6208G>T stop_gained ORF1ab_pp1a E2070* 1.00e+0 BA.2.10.1
V1544 6476G>T missense_variant ORF1ab_pp1a R2159L 1.00e+0 BA.2.10.1
V1546 6488G>T missense_variant ORF1ab_pp1a R2163L 1.00e+0 BA.2.10.1
V1565 6619G>T missense_variant ORF1ab_pp1a G2207C 1.00e+0 BA.2.10.1
V1578 6742G>T missense_variant ORF1ab_pp1a A2248S 1.00e+0 BA.2.10.1
V162 178G>T missense_variant ORF1ab_pp1a V60F 1.00e+0 BA.2.10.1
V1644 7207G>T missense_variant ORF1ab_pp1a G2403C 1.00e+0 BA.2.10.1
V1649 7244G>T missense_variant ORF1ab_pp1a R2415L 1.00e+0 BA.2.10.1
V1651 7264G>T stop_gained ORF1ab_pp1a E2422* 1.00e+0 BA.2.10.1
V1662 7471G>T missense_variant ORF1ab_pp1a V2491F 1.00e+0 BA.2.10.1
V168 218G>T missense_variant ORF1ab_pp1a R73L 1.00e+0 BA.2.10.1
V1712 7783G>T missense_variant ORF1ab_pp1a V2595F 1.00e+0 BA.2.10.1
V1716 7810G>T missense_variant ORF1ab_pp1a V2604L 1.00e+0 BA.2.10.1
V1743 7913G>T missense_variant ORF1ab_pp1a R2638L 1.00e+0 BA.2.10.1
V175 230G>T missense_variant ORF1ab_pp1a R77L 1.00e+0 BA.2.10.1
V1753 8002G>T missense_variant ORF1ab_pp1a D2668Y 1.00e+0 BA.2.10.1
V1760 8057G>T missense_variant ORF1ab_pp1a R2686L 1.00e+0 BA.2.10.1
V1766 8090G>T missense_variant ORF1ab_pp1a R2697L 1.00e+0 BA.2.10.1
V1774 8143G>T missense_variant ORF1ab_pp1a V2715F 1.00e+0 BA.2.10.1
V1777 8177G>T missense_variant ORF1ab_pp1a R2726L 1.00e+0 BA.2.10.1
V1778 8189G>T missense_variant ORF1ab_pp1a R2730L 1.00e+0 BA.2.10.1
V1819 8453G>T missense_variant ORF1ab_pp1a R2818L 1.00e+0 BA.2.10.1
V1829 8522G>T missense_variant ORF1ab_pp1a R2841L 1.00e+0 BA.2.10.1
V1846 8596G>T missense_variant ORF1ab_pp1a V2866L 1.00e+0 BA.2.10.1
V1857 8624G>T missense_variant ORF1ab_pp1a R2875L 1.00e+0 BA.2.10.1
V1883 8846G>T missense_variant ORF1ab_pp1a R2949L 1.00e+0 BA.2.10.1
V1886 8858G>T missense_variant ORF1ab_pp1a R2953L 1.00e+0 BA.2.10.1
V1900 8959G>T missense_variant ORF1ab_pp1a G2987C 1.00e+0 BA.2.10.1
V1961 9491G>T missense_variant ORF1ab_pp1a R3164L 1.00e+0 BA.2.10.1
V1964 9581G>T missense_variant ORF1ab_pp1a R3194L 1.00e+0 BA.2.10.1
V1979 9703G>T missense_variant ORF1ab_pp1a A3235S 1.00e+0 BA.2.10.1
V1993 9874G>T missense_variant ORF1ab_pp1a G3292C 1.00e+0 BA.2.10.1
V1997 9892G>T missense_variant ORF1ab_pp1a V3298L 1.00e+0 BA.2.10.1
V2005 9968G>T missense_variant ORF1ab_pp1a R3323L 8.16e-1 BA.2.10.1
V2030 10103G>T missense_variant ORF1ab_pp1a R3368L 8.16e-1 BA.2.10.1
V2055 10417G>T missense_variant ORF1ab_pp1a A3473S 1.00e+0 BA.2.10.1
V2060 10454G>T missense_variant ORF1ab_pp1a R3485L 1.00e+0 BA.2.10.1
V207 277G>T stop_gained ORF1ab_pp1a E93* 1.00e+0 BA.2.10.1
V2079 10570G>T missense_variant ORF1ab_pp1a V3524F 1.00e+0 BA.2.10.1
V2087 10625G>T missense_variant ORF1ab_pp1a R3542L 1.00e+0 BA.2.10.1
V21 -165G>T upstream_gene_variant ORF1ab_pp1a None 1.00e+0 BA.2.10.1
V212 292G>T missense_variant ORF1ab_pp1a G98C 1.00e+0 BA.2.10.1
V215 296G>T missense_variant ORF1ab_pp1a R99L 7.75e-1 BA.2.10.1
V2151 10985G>T missense_variant ORF1ab_pp1a R3662L 1.00e+0 BA.2.10.1
V2188 11152G>T missense_variant ORF1ab_pp1a V3718F 8.66e-1 BA.2.10.1
V2238 11405G>T missense_variant ORF1ab_pp1a R3802L 1.00e+0 BA.2.10.1
V228 337G>T stop_gained ORF1ab_pp1a E113* 1.00e+0 BA.2.10.1
V2310 11978G>T missense_variant ORF1ab_pp1a R3993L 1.00e+0 BA.2.10.1
V2313 11996G>T missense_variant ORF1ab_pp1a R3999L 1.00e+0 BA.2.10.1
V2358 12449G>T missense_variant ORF1ab_pp1a R4150L 1.00e+0 BA.2.10.1
V2362 12469G>T missense_variant ORF1ab_pp1a G4157C 1.00e+0 BA.2.10.1
V2386 12559G>T missense_variant ORF1ab_pp1a D4187Y 1.00e+0 BA.2.10.1
V239 356G>T missense_variant ORF1ab_pp1a R119L 1.00e+0 BA.2.10.1
V2406 12752G>T missense_variant ORF1ab_pp1a R4251L 1.00e+0 BA.2.10.1
V2424 12992G>T missense_variant ORF1ab_pp1a R4331L 1.00e+0 BA.2.10.1
V243 371G>T missense_variant ORF1ab_pp1a R124L 8.66e-1 BA.2.10.1
V2438 13114G>T missense_variant ORF1ab_pp1a V4372F 1.00e+0 BA.2.10.1
V2439 13120G>T missense_variant ORF1ab_pp1a G4374C 1.00e+0 BA.2.10.1
V2445 13160G>T missense_variant ORF1ab_pp1a R4387L 1.00e+0 BA.2.10.1
V2446 13162G>T stop_gained ORF1ab_pp1a E4388* 1.00e+0 BA.2.10.1
V245 379G>T missense_variant ORF1ab_pp1a G127C 1.00e+0 BA.2.10.1
V2452 13204G>T missense_variant ORF1ab_pp1a G4402W 1.00e+0 BA.2.10.1
V2453 13213G>T missense_variant ORF1ab_pp1ab G4405C 1.00e+0 BA.2.10.1
V2456 13229G>T missense_variant ORF1ab_pp1ab R4410L 1.00e+0 BA.2.10.1
V2459 13243G>T missense_variant ORF1ab_pp1ab G4415C 1.00e+0 BA.2.10.1
V2463 13267G>T missense_variant ORF1ab_pp1ab V4423L 1.00e+0 BA.2.10.1
V2470 13340G>T missense_variant ORF1ab_pp1ab R4447L 1.00e+0 BA.2.10.1
V2474 13357G>T stop_gained ORF1ab_pp1ab E4453* 1.00e+0 BA.2.10.1
V2496 13498G>T missense_variant ORF1ab_pp1ab G4500C 1.00e+0 BA.2.10.1
V2500 13523G>T missense_variant ORF1ab_pp1ab R4508L 1.00e+0 BA.2.10.1
V2503 13529G>T missense_variant ORF1ab_pp1ab R4510L 1.00e+0 BA.2.10.1
V2507 13558G>T missense_variant ORF1ab_pp1ab V4520F 1.00e+0 BA.2.10.1
V251 409G>T missense_variant ORF1ab_pp1a G137C 7.07e-1 BA.2.10.1
V2528 13694G>T missense_variant ORF1ab_pp1ab R4565L 1.00e+0 BA.2.10.1
V2529 13696G>T missense_variant ORF1ab_pp1ab V4566L 1.00e+0 BA.2.10.1
V2532 13702G>T missense_variant ORF1ab_pp1ab A4568S 1.00e+0 BA.2.10.1
V2534 13718G>T missense_variant ORF1ab_pp1ab R4573L 1.00e+0 BA.2.10.1
V2535 13724G>T missense_variant ORF1ab_pp1ab R4575L 1.00e+0 BA.2.10.1
V2540 13766G>T missense_variant ORF1ab_pp1ab R4589L 1.00e+0 BA.2.10.1
V2543 13834G>T missense_variant ORF1ab_pp1ab G4612C 1.00e+0 BA.2.10.1
V255 412G>T missense_variant ORF1ab_pp1a A138S 1.00e+0 BA.2.10.1
V257 415G>T missense_variant ORF1ab_pp1a D139Y 1.00e+0 BA.2.10.1
V2584 14030G>T missense_variant ORF1ab_pp1ab R4677L 1.00e+0 BA.2.10.1
V2612 14320G>T missense_variant ORF1ab_pp1ab A4774S 1.00e+0 BA.2.10.1
V2615 14351G>T missense_variant ORF1ab_pp1ab R4784L 1.00e+0 BA.2.10.1
V2620 14413G>T missense_variant ORF1ab_pp1ab G4805C 1.00e+0 BA.2.10.1
V2631 14530G>T missense_variant ORF1ab_pp1ab D4844Y 1.00e+0 BA.2.10.1
V2632 14546G>T missense_variant ORF1ab_pp1ab R4849L 1.00e+0 BA.2.10.1
V2641 14659G>T missense_variant ORF1ab_pp1ab V4887F 1.00e+0 BA.2.10.1
V2652 14761G>T missense_variant ORF1ab_pp1ab A4921S 1.00e+0 BA.2.10.1
V2654 14774G>T missense_variant ORF1ab_pp1ab R4925L 1.00e+0 BA.2.10.1
V2656 14840G>T missense_variant ORF1ab_pp1ab R4947L 1.00e+0 BA.2.10.1
V2657 14845G>T missense_variant ORF1ab_pp1ab V4949L 1.00e+0 BA.2.10.1
V2660 14917G>T missense_variant ORF1ab_pp1ab A4973S 1.00e+0 BA.2.10.1
V2680 15095G>T missense_variant ORF1ab_pp1ab R5032L 1.00e+0 BA.2.10.1
V2687 15128G>T missense_variant ORF1ab_pp1ab R5043L 1.00e+0 BA.2.10.1
V269 439G>T missense_variant ORF1ab_pp1a D147Y 1.00e+0 BA.2.10.1
V270 442G>T stop_gained ORF1ab_pp1a E148* 1.00e+0 BA.2.10.1
V2702 15325G>T missense_variant ORF1ab_pp1ab D5109Y 1.00e+0 BA.2.10.1
V2706 15338G>T missense_variant ORF1ab_pp1ab R5113L 1.00e+0 BA.2.10.1
V2715 15415G>T missense_variant ORF1ab_pp1ab A5139S 1.00e+0 BA.2.10.1
V2716 15425G>T missense_variant ORF1ab_pp1ab R5142L 1.00e+0 BA.2.10.1
V2719 15457G>T missense_variant ORF1ab_pp1ab D5153Y 1.00e+0 BA.2.10.1
V2743 15697G>T missense_variant ORF1ab_pp1ab G5233C 1.00e+0 BA.2.10.1
V2745 15718G>T missense_variant ORF1ab_pp1ab V5240L 1.00e+0 BA.2.10.1
V2746 15749G>T missense_variant ORF1ab_pp1ab R5250L 1.00e+0 BA.2.10.1
V2747 15754G>T missense_variant ORF1ab_pp1ab V5252L 1.00e+0 BA.2.10.1
V2772 16034G>T missense_variant ORF1ab_pp1ab R5345L 1.00e+0 BA.2.10.1
V2796 16273G>T missense_variant ORF1ab_pp1ab D5425Y 1.00e+0 BA.2.10.1
V2812 16436G>T missense_variant ORF1ab_pp1ab R5479L 1.00e+0 BA.2.10.1
V2822 16505G>T missense_variant ORF1ab_pp1ab R5502L 1.00e+0 BA.2.10.1
V2823 16529G>T missense_variant ORF1ab_pp1ab R5510L 1.00e+0 BA.2.10.1
V2834 16607G>T missense_variant ORF1ab_pp1ab R5536L 1.00e+0 BA.2.10.1
V285 512G>T missense_variant ORF1ab_pp1a R171L 1.00e+0 BA.2.10.1
V287 524G>T missense_variant ORF1ab_pp1a R175L 1.00e+0 BA.2.10.1
V2880 16880G>T missense_variant ORF1ab_pp1ab R5627L 1.00e+0 BA.2.10.1
V2884 16909G>T missense_variant ORF1ab_pp1ab A5637S 1.00e+0 BA.2.10.1
V289 535G>T stop_gained ORF1ab_pp1a G179* 1.00e+0 BA.2.10.1
V2894 16982G>T missense_variant ORF1ab_pp1ab R5661L 1.00e+0 BA.2.10.1
V2896 16988G>T missense_variant ORF1ab_pp1ab R5663L 1.00e+0 BA.2.10.1
V29 -142G>T upstream_gene_variant ORF1ab_pp1a None 1.00e+0 BA.2.10.1
V2919 17173G>T missense_variant ORF1ab_pp1ab D5725Y 1.00e+0 BA.2.10.1
V2923 17198G>T missense_variant ORF1ab_pp1ab R5733L 1.00e+0 BA.2.10.1
V2933 17287G>T stop_gained ORF1ab_pp1ab G5763* 1.00e+0 BA.2.10.1
V2935 17297G>T missense_variant ORF1ab_pp1ab R5766L 1.00e+0 BA.2.10.1
V2936 17300G>T missense_variant ORF1ab_pp1ab R5767L 1.00e+0 BA.2.10.1
V2956 17455G>T missense_variant ORF1ab_pp1ab V5819L 1.00e+0 BA.2.10.1
V296 551G>T missense_variant ORF1ab_pp1a R184L 1.00e+0 BA.2.10.1
V2960 17477G>T missense_variant ORF1ab_pp1ab R5826L 1.00e+0 BA.2.10.1
V297 559G>T missense_variant ORF1ab_pp1a D187Y 1.00e+0 BA.2.10.1
V2992 17753G>T missense_variant ORF1ab_pp1ab R5918L 1.00e+0 BA.2.10.1
V3016 17899A>T missense_variant ORF1ab_pp1ab I5967L 1.00e+0 BA.2.10.1
V3039 18002G>T missense_variant ORF1ab_pp1ab R6001L 1.00e+0 BA.2.10.1
V3040 18004G>T stop_gained ORF1ab_pp1ab E6002* 1.00e+0 BA.2.10.1
V3045 18026G>T missense_variant ORF1ab_pp1ab R6009L 1.00e+0 BA.2.10.1
V3048 18043G>T missense_variant ORF1ab_pp1ab D6015Y 1.00e+0 BA.2.10.1
V3049 18049G>T stop_gained ORF1ab_pp1ab E6017* 1.00e+0 BA.2.10.1
V3085 18263G>T missense_variant ORF1ab_pp1ab R6088L 1.00e+0 BA.2.10.1
V3092 18319G>T missense_variant ORF1ab_pp1ab V6107L 1.00e+0 BA.2.10.1
V3102 18389G>T missense_variant ORF1ab_pp1ab R6130L 1.00e+0 BA.2.10.1
V3105 18413G>T missense_variant ORF1ab_pp1ab R6138L 1.00e+0 BA.2.10.1
V311 620G>T missense_variant ORF1ab_pp1a R207L 1.00e+0 BA.2.10.1
V3115 18481G>T missense_variant ORF1ab_pp1ab V6161F 1.00e+0 BA.2.10.1
V3130 18625G>T stop_gained ORF1ab_pp1ab E6209* 1.00e+0 BA.2.10.1
V3135 18641G>T missense_variant ORF1ab_pp1ab R6214L 1.00e+0 BA.2.10.1
V3187 18943G>T missense_variant ORF1ab_pp1ab D6315Y 1.00e+0 BA.2.10.1
V321 649G>T stop_gained ORF1ab_pp1a E217* 1.00e+0 BA.2.10.1
V3216 19202G>T missense_variant ORF1ab_pp1ab R6401L 1.00e+0 BA.2.10.1
V3220 19261G>T missense_variant ORF1ab_pp1ab D6421Y 1.00e+0 BA.2.10.1
V3254 19538G>T missense_variant ORF1ab_pp1ab R6513L 1.00e+0 BA.2.10.1
V3293 19769G>T missense_variant ORF1ab_pp1ab R6590L 1.00e+0 BA.2.10.1
V332 695G>T missense_variant ORF1ab_pp1a R232L 1.00e+0 BA.2.10.1
V3331 20027G>T missense_variant ORF1ab_pp1ab R6676L 1.00e+0 BA.2.10.1
V3334 20053G>T stop_gained ORF1ab_pp1ab E6685* 1.00e+0 BA.2.10.1
V3338 20062G>T missense_variant ORF1ab_pp1ab V6688F 1.00e+0 BA.2.10.1
V3345 20126G>T missense_variant ORF1ab_pp1ab R6709L 1.00e+0 BA.2.10.1
V336 731G>T missense_variant ORF1ab_pp1a R244L 1.00e+0 BA.2.10.1
V3415 20527G>T missense_variant ORF1ab_pp1ab A6843S 1.00e+0 BA.2.10.1
V3428 20683G>T missense_variant ORF1ab_pp1ab D6895Y 1.00e+0 BA.2.10.1
V3444 20791G>T missense_variant ORF1ab_pp1ab D6931Y 1.00e+0 BA.2.10.1
V3462 20893G>T missense_variant ORF1ab_pp1ab V6965L 1.00e+0 BA.2.10.1
V3475 20956G>T missense_variant ORF1ab_pp1ab A6986S 1.00e+0 BA.2.10.1
V3487 21041G>T missense_variant ORF1ab_pp1ab R7014L 1.00e+0 BA.2.10.1
V3488 21043G>T stop_gained ORF1ab_pp1ab E7015* 1.00e+0 BA.2.10.1
V3517 -5G>T upstream_gene_variant S None 1.00e+0 BA.2.10.1
V3562 101G>T missense_variant S R34L 1.00e+0 BA.2.10.1
V3621 367G>T missense_variant S A123S 1.00e+0 BA.2.10.1
V370 902G>T missense_variant ORF1ab_pp1a R301L 1.00e+0 BA.2.10.1
V3737 641G>T missense_variant S R214L 8.66e-1 BA.2.10.1
V38 -114G>T upstream_gene_variant ORF1ab_pp1a None 1.00e+0 BA.2.10.1
V3822 1030G>T missense_variant S A344S 1.00e+0 BA.2.10.1
V3857 1231G>T missense_variant S A411S 8.16e-1 BA.2.10.1
V3923 1478A>T missense_variant S Q493L 1.00e+0 BA.2.10.1
V3959 1730G>T missense_variant S R577L 1.00e+0 BA.2.10.1
V396 1003G>T missense_variant ORF1ab_pp1a D335Y 1.00e+0 BA.2.10.1
V3985 1901G>T missense_variant S R634L 1.00e+0 BA.2.10.1
V3991 1937G>T missense_variant S R646L 1.00e+0 BA.2.10.1
V4005 2014G>T missense_variant S A672S 1.00e+0 BA.2.10.1
V401 1024G>T stop_gained ORF1ab_pp1a E342* 1.00e+0 BA.2.10.1
V4025 2045G>T missense_variant S R682L 8.66e-1 BA.2.10.1
V4026 2048G>T missense_variant S R683L 1.00e+0 BA.2.10.1
V4029 2054G>T missense_variant S R685L 1.00e+0 BA.2.10.1
V4065 2294G>T missense_variant S R765L 1.00e+0 BA.2.10.1
V41 -101G>T upstream_gene_variant ORF1ab_pp1a None 1.00e+0 BA.2.10.1
V4109 2569G>T missense_variant S G857C 1.00e+0 BA.2.10.1
V4150 2948G>T missense_variant S R983L 1.00e+0 BA.2.10.1
V4185 3272G>T missense_variant S R1091L 1.00e+0 BA.2.10.1
V4235 3554G>T missense_variant S R1185L 1.00e+0 BA.2.10.1
V4244 3595G>T missense_variant S D1199Y 1.00e+0 BA.2.10.1
V4302 -6G>T upstream_gene_variant ORF3a None 1.00e+0 BA.2.10.1
V4345 89G>T missense_variant ORF3a R30L 1.00e+0 BA.2.10.1
V4347 91G>T missense_variant ORF3a A31S 1.00e+0 BA.2.10.1
V437 1156G>T stop_gained ORF1ab_pp1a E386* 1.00e+0 BA.2.10.1
V4379 130G>T stop_gained ORF3a G44* 1.00e+0 BA.2.10.1
V4391 148G>T missense_variant ORF3a V50F 1.00e+0 BA.2.10.1
V4410 175G>T missense_variant ORF3a A59S 1.00e+0 BA.2.10.1
V4459 289G>T missense_variant ORF3a V97F 1.00e+0 BA.2.10.1
V446 1193G>T missense_variant ORF1ab_pp1a R398L 1.00e+0 BA.2.10.1
V4512 401G>T missense_variant ORF3a R134L 8.66e-1 BA.2.10.1
V453 1205G>T missense_variant ORF1ab_pp1a R402L 1.00e+0 BA.2.10.1
V4614 751G>T missense_variant ORF3a G251C 1.00e+0 BA.2.10.1
V4620 760G>T stop_gained ORF3a G254* 1.00e+0 BA.2.10.1
V464 1277G>T missense_variant ORF1ab_pp1a R426L 1.00e+0 BA.2.10.1
V4652 817G>T missense_variant ORF3a V273L 7.75e-1 BA.2.10.1
V4672 70G>T missense_variant E V24L 1.00e+0 BA.2.10.1
V4678 145G>T missense_variant E V49L 8.66e-1 BA.2.10.1
V4685 172G>T missense_variant E V58F 8.66e-1 BA.2.10.1
V4686 182G>T missense_variant E R61L 1.00e+0 BA.2.10.1
V469 1285G>T missense_variant ORF1ab_pp1a A429S 1.00e+0 BA.2.10.1
V4722 16G>T missense_variant M G6C 1.00e+0 BA.2.10.1
V4757 232G>T missense_variant M G78C 1.00e+0 BA.2.10.1
V4763 247G>T missense_variant M A83S 8.66e-1 BA.2.10.1
V4772 320G>T missense_variant M R107L 1.00e+0 BA.2.10.1
V4782 473G>T missense_variant M R158L 8.16e-1 BA.2.10.1
V4784 521G>T missense_variant M R174L 8.16e-1 BA.2.10.1
V4788 593G>T missense_variant M R198L 8.16e-1 BA.2.10.1
V4800 13G>T missense_variant ORF6 V5F 7.75e-1 BA.2.10.1
V4812 59G>T missense_variant ORF6 R20M 1.00e+0 BA.2.10.1
V484 1330G>T stop_gained ORF1ab_pp1a E444* 1.00e+0 BA.2.10.1
V4844 -4G>T upstream_gene_variant ORF7a None 8.66e-1 BA.2.10.1
V4864 37G>T missense_variant ORF7a A13S 1.00e+0 BA.2.10.1
V4895 121G>T stop_gained ORF7a E41* 1.00e+0 BA.2.10.1
V4930 208G>T missense_variant ORF7a G70C 8.66e-1 BA.2.10.1
V4932 211G>T missense_variant ORF7a V71L 1.00e+0 BA.2.10.1
V4937 220G>T missense_variant ORF7a V74F 1.00e+0 BA.2.10.1
V4943 233G>T missense_variant ORF7a R78L 8.66e-1 BA.2.10.1
V5056 127G>T missense_variant ORF7b A43S 1.00e+0 BA.2.10.1
V5061 -4G>T upstream_gene_variant ORF8 None 1.00e+0 BA.2.10.1
V511 1420G>T missense_variant ORF1ab_pp1a A474S 1.00e+0 BA.2.10.1
V5173 223G>T missense_variant ORF8 D75Y 1.00e+0 BA.2.10.1
V5176 229G>T missense_variant ORF8 G77C 1.00e+0 BA.2.10.1
V5196 302G>T missense_variant ORF8 R101L 1.00e+0 BA.2.10.1
V5209 340G>T missense_variant ORF8 V114F 1.00e+0 BA.2.10.1
V5212 344G>T missense_variant ORF8 R115L 1.00e+0 BA.2.10.1
V5234 -12G>T upstream_gene_variant N None 1.00e+0 BA.2.10.1
V5266 29G>T missense_variant N R10L 1.00e+0 BA.2.10.1
V5277 41G>T missense_variant N R14L 1.00e+0 BA.2.10.1
V5324 107G>T missense_variant N R36L 8.66e-1 BA.2.10.1
V5331 119G>T missense_variant N R40L 8.66e-1 BA.2.10.1
V5333 122G>T missense_variant N R41L 1.00e+0 BA.2.10.1
V5337 163G>T missense_variant N A55S 6.55e-1 BA.2.10.1
V5345 203G>T missense_variant N R68L 1.00e+0 BA.2.10.1
V5349 214G>T missense_variant N V72F 1.00e+0 BA.2.10.1
V5355 263G>T missense_variant N R88L 1.00e+0 BA.2.10.1
V5359 278G>T missense_variant N R93L 1.00e+0 BA.2.10.1
V5361 284G>T missense_variant N R95L 1.00e+0 BA.2.10.1
V5364 295G>T missense_variant N G99C 1.00e+0 BA.2.10.1
V5379 385G>T missense_variant N G129C 1.00e+0 BA.2.10.1
V5395 446G>T missense_variant N R149L 1.00e+0 BA.2.10.1
V5404 472G>T missense_variant N V158L 1.00e+0 BA.2.10.1
V5414 517G>T missense_variant N A173S 8.66e-1 BA.2.10.1
V5419 535G>T missense_variant N G179C 1.00e+0 BA.2.10.1
V5429 554G>T missense_variant N R185L 1.00e+0 BA.2.10.1
V5434 566G>T missense_variant N R189L 1.00e+0 BA.2.10.1
V5437 572G>T missense_variant N R191L 1.00e+0 BA.2.10.1
V5467 611G>T missense_variant N G204V 1.00e+0 BA.2.10.1
V5496 643G>T missense_variant N G215C 7.75e-1 BA.2.10.1
V5536 776G>T missense_variant N R259L 1.00e+0 BA.2.10.1
V5537 785G>T missense_variant N R262L 1.00e+0 BA.2.10.1
V554 1625G>T missense_variant ORF1ab_pp1a R542L 1.00e+0 BA.2.10.1
V5546 823G>T missense_variant N G275C 1.00e+0 BA.2.10.1
V5547 830G>T missense_variant N R277L 1.00e+0 BA.2.10.1
V556 1634G>T missense_variant ORF1ab_pp1a R545L 1.00e+0 BA.2.10.1
V5565 931G>T missense_variant N A311S 1.00e+0 BA.2.10.1
V5566 946G>T stop_gained N G316* 1.00e+0 BA.2.10.1
V5570 956G>T missense_variant N R319L 1.00e+0 BA.2.10.1
V563 1649G>T missense_variant ORF1ab_pp1a R550L 1.00e+0 BA.2.10.1
V5688 16G>T missense_variant ORF10 V6F 1.00e+0 BA.2.10.1
V5690 22G>T missense_variant ORF10 A8S 1.00e+0 BA.2.10.1
V5708 71G>T missense_variant ORF10 R24L 8.16e-1 BA.2.10.1
V574 1679G>T missense_variant ORF1ab_pp1a R560L 8.66e-1 BA.2.10.1
V581 1696G>T missense_variant ORF1ab_pp1a A566S 1.00e+0 BA.2.10.1
V5875 222G>T synonymous_variant ORF1ab_pp1a S74S 1.00e+0 BA.2.10.1
V5970 726G>T synonymous_variant ORF1ab_pp1a T242T 7.75e-1 BA.2.10.1
V5998 921G>T synonymous_variant ORF1ab_pp1a A307A 1.00e+0 BA.2.10.1
V6010 999G>T synonymous_variant ORF1ab_pp1a T333T 7.75e-1 BA.2.10.1
V61 -68G>T upstream_gene_variant ORF1ab_pp1a None 1.00e+0 BA.2.10.1
V6121 1830G>T synonymous_variant ORF1ab_pp1a S610S 1.00e+0 BA.2.10.1
V6165 2133G>T synonymous_variant ORF1ab_pp1a T711T 1.00e+0 BA.2.10.1
V6413 3942G>T synonymous_variant ORF1ab_pp1a A1314A 1.00e+0 BA.2.10.1
V6420 3990G>T synonymous_variant ORF1ab_pp1a P1330P 1.00e+0 BA.2.10.1
V643 1933G>T missense_variant ORF1ab_pp1a G645C 1.00e+0 BA.2.10.1
V6481 4455G>T synonymous_variant ORF1ab_pp1a A1485A 7.07e-1 BA.2.10.1
V6521 4743G>T synonymous_variant ORF1ab_pp1a T1581T 1.00e+0 BA.2.10.1
V657 1981G>T missense_variant ORF1ab_pp1a G661C 1.00e+0 BA.2.10.1
V6610 5364G>T synonymous_variant ORF1ab_pp1a T1788T 1.00e+0 BA.2.10.1
V6634 5592G>T synonymous_variant ORF1ab_pp1a T1864T 1.00e+0 BA.2.10.1
V6686 6006G>T synonymous_variant ORF1ab_pp1a T2002T 1.00e+0 BA.2.10.1
V6695 6072G>T synonymous_variant ORF1ab_pp1a S2024S 1.00e+0 BA.2.10.1
V6704 6099G>T synonymous_variant ORF1ab_pp1a A2033A 1.00e+0 BA.2.10.1
V6765 6585G>T synonymous_variant ORF1ab_pp1a P2195P 1.00e+0 BA.2.10.1
V6859 7410G>T synonymous_variant ORF1ab_pp1a A2470A 8.66e-1 BA.2.10.1
V69 -62G>T upstream_gene_variant ORF1ab_pp1a None 1.00e+0 BA.2.10.1
V6908 7791G>T synonymous_variant ORF1ab_pp1a T2597T 1.00e+0 BA.2.10.1
V6950 8088G>T synonymous_variant ORF1ab_pp1a A2696A 8.66e-1 BA.2.10.1
V6952 8103G>T synonymous_variant ORF1ab_pp1a A2701A 1.00e+0 BA.2.10.1
V7125 9537G>T synonymous_variant ORF1ab_pp1a A3179A 1.00e+0 BA.2.10.1
V7140 9606G>T synonymous_variant ORF1ab_pp1a T3202T 1.00e+0 BA.2.10.1
V72 -58G>T upstream_gene_variant ORF1ab_pp1a None 1.00e+0 BA.2.10.1
V7246 10377G>T synonymous_variant ORF1ab_pp1a T3459T 6.12e-1 BA.2.10.1
V747 2359G>T missense_variant ORF1ab_pp1a G787W 1.00e+0 BA.2.10.1
V7480 12249G>T synonymous_variant ORF1ab_pp1a T4083T 1.00e+0 BA.2.10.1
V7502 12504G>T synonymous_variant ORF1ab_pp1a A4168A 7.75e-1 BA.2.10.1
V752 2374G>T stop_gained ORF1ab_pp1a E792* 1.00e+0 BA.2.10.1
V7559 12936G>T synonymous_variant ORF1ab_pp1a P4312P 1.00e+0 BA.2.10.1
V7567 12975G>T synonymous_variant ORF1ab_pp1a S4325S 1.00e+0 BA.2.10.1
V7602 13194G>T synonymous_variant ORF1ab_pp1a S4398S 1.00e+0 BA.2.10.1
V7604 13239G>T synonymous_variant ORF1ab_pp1ab P4413P 8.66e-1 BA.2.10.1
V762 2452G>T missense_variant ORF1ab_pp1a G818C 1.00e+0 BA.2.10.1
V7677 13854G>T synonymous_variant ORF1ab_pp1ab T4618T 1.00e+0 BA.2.10.1
V7699 14004G>T synonymous_variant ORF1ab_pp1ab T4668T 8.66e-1 BA.2.10.1
V7751 14358G>T synonymous_variant ORF1ab_pp1ab T4786T 1.00e+0 BA.2.10.1
V782 2593G>T missense_variant ORF1ab_pp1a G865C 1.00e+0 BA.2.10.1
V7846 15108G>T synonymous_variant ORF1ab_pp1ab T5036T 1.00e+0 BA.2.10.1
V7869 15279G>T synonymous_variant ORF1ab_pp1ab T5093T 7.75e-1 BA.2.10.1
V787 2614G>T missense_variant ORF1ab_pp1a A872S 1.00e+0 BA.2.10.1
V7951 15957G>T synonymous_variant ORF1ab_pp1ab P5319P 1.00e+0 BA.2.10.1
V7974 16113G>T synonymous_variant ORF1ab_pp1ab P5371P 8.66e-1 BA.2.10.1
V8011 16383G>T synonymous_variant ORF1ab_pp1ab T5461T 7.75e-1 BA.2.10.1
V8101 17070G>T synonymous_variant ORF1ab_pp1ab T5690T 1.00e+0 BA.2.10.1
V8145 17415G>T synonymous_variant ORF1ab_pp1ab T5805T 1.00e+0 BA.2.10.1
V8252 18198G>T synonymous_variant ORF1ab_pp1ab P6066P 1.00e+0 BA.2.10.1
V8296 18492G>T synonymous_variant ORF1ab_pp1ab P6164P 1.00e+0 BA.2.10.1
V8328 18696G>T synonymous_variant ORF1ab_pp1ab A6232A 1.00e+0 BA.2.10.1
V8388 19191G>T synonymous_variant ORF1ab_pp1ab T6397T 1.00e+0 BA.2.10.1
V8502 20205G>T synonymous_variant ORF1ab_pp1ab A6735A 1.00e+0 BA.2.10.1
V8519 20406G>T synonymous_variant ORF1ab_pp1ab A6802A 1.00e+0 BA.2.10.1
V8521 20415G>T synonymous_variant ORF1ab_pp1ab P6805P 1.00e+0 BA.2.10.1
V8547 20667G>T synonymous_variant ORF1ab_pp1ab T6889T 7.75e-1 BA.2.10.1
V8549 20673G>T synonymous_variant ORF1ab_pp1ab T6891T 1.00e+0 BA.2.10.1
V8678 336G>T synonymous_variant S S112S 8.66e-1 BA.2.10.1
V8698 489G>T synonymous_variant S A163A 8.66e-1 BA.2.10.1
V8711 624G>T synonymous_variant S T208T 1.00e+0 BA.2.10.1
V8721 663G>T synonymous_variant S S221S 8.66e-1 BA.2.10.1
V8749 906G>T synonymous_variant S T302T 1.00e+0 BA.2.10.1
V882 2977G>T missense_variant ORF1ab_pp1a G993C 1.00e+0 BA.2.10.1
V8973 2637G>T synonymous_variant S A879A 8.66e-1 BA.2.10.1
V9003 2883G>T synonymous_variant S T961T 1.00e+0 BA.2.10.1
V9151 102G>T synonymous_variant ORF3a T34T 7.75e-1 BA.2.10.1
V9154 108G>T synonymous_variant ORF3a P36P 7.75e-1 BA.2.10.1
V9253 801G>T synonymous_variant ORF3a P267P 1.00e+0 BA.2.10.1
V9254 804G>T synonymous_variant ORF3a T268T 1.00e+0 BA.2.10.1
V9256 807G>T synonymous_variant ORF3a T269T 1.00e+0 BA.2.10.1
V9262 18G>T synonymous_variant E S6S 1.00e+0 BA.2.10.1
V9274 108G>T synonymous_variant E A36A 1.00e+0 BA.2.10.1
V9330 312G>T synonymous_variant M A104A 6.12e-1 BA.2.10.1
V9332 318G>T synonymous_variant M T106T 8.66e-1 BA.2.10.1
V9376 525G>T synonymous_variant M T175T 8.16e-1 BA.2.10.1
V9381 552G>T synonymous_variant M S184S 8.16e-1 BA.2.10.1
V9480 315G>T synonymous_variant ORF7a A105A 7.75e-1 BA.2.10.1
V9550 309G>T synonymous_variant ORF8 S103S 1.00e+0 BA.2.10.1
V9568 48G>T synonymous_variant N T16T 1.00e+0 BA.2.10.1
V9582 105G>T synonymous_variant N A35A 7.75e-1 BA.2.10.1
V9596 150G>T synonymous_variant N A50A 7.75e-1 BA.2.10.1
V9744 906G>T synonymous_variant N P302P 7.75e-1 BA.2.10.1
V9753 939G>T synonymous_variant N A313A 1.00e+0 BA.2.10.1
V9758 954G>T synonymous_variant N S318S 6.55e-1 BA.2.10.1
V9764 981G>T synonymous_variant N S327S 7.75e-1 BA.2.10.1
V9766 987G>T synonymous_variant N T329T 8.66e-1 BA.2.10.1
V978 3319G>T stop_gained ORF1ab_pp1a G1107* 1.00e+0 BA.2.10.1
V9797 1149G>T synonymous_variant N P383P 1.00e+0 BA.2.10.1
V9824 30G>T synonymous_variant ORF10 P10P 8.66e-1 BA.2.10.1
V9825 36G>T synonymous_variant ORF10 T12T 1.00e+0 BA.2.10.1
V988 3355G>T missense_variant ORF1ab_pp1a G1119C 1.00e+0 BA.2.10.1
V1002 3424G>T stop_gained ORF1ab_pp1a E1142* 9.98e-1 BA.2.10.2
V1026 3509G>T missense_variant ORF1ab_pp1a R1170L 9.98e-1 BA.2.10.2
V103 -20G>T upstream_gene_variant ORF1ab_pp1a None 9.76e-1 BA.2.10.2
V1047 3610G>T missense_variant ORF1ab_pp1a A1204S 9.98e-1 BA.2.10.2
V11 -194G>T upstream_gene_variant ORF1ab_pp1a None 8.85e-1 BA.2.10.2
V111 -10G>T upstream_gene_variant ORF1ab_pp1a None 9.78e-1 BA.2.10.2
V1133 4127G>T missense_variant ORF1ab_pp1a R1376L 9.85e-1 BA.2.10.2
V1139 4157G>T missense_variant ORF1ab_pp1a R1386L 9.78e-1 BA.2.10.2
V1146 4211G>T missense_variant ORF1ab_pp1a R1404L 9.56e-1 BA.2.10.2
V1159 4318G>T missense_variant ORF1ab_pp1a D1440Y 9.46e-1 BA.2.10.2
V1164 4391G>T missense_variant ORF1ab_pp1a R1464L 9.81e-1 BA.2.10.2
V118 28G>T stop_gained ORF1ab_pp1a E10* 9.83e-1 BA.2.10.2
V120 40G>T missense_variant ORF1ab_pp1a V14F 9.83e-1 BA.2.10.2
V124 71G>T missense_variant ORF1ab_pp1a R24L 9.85e-1 BA.2.10.2
V125 73G>T missense_variant ORF1ab_pp1a D25Y 9.85e-1 BA.2.10.2
V1252 4883G>T missense_variant ORF1ab_pp1a R1628L 9.98e-1 BA.2.10.2
V126 76G>T missense_variant ORF1ab_pp1a V26L 9.85e-1 BA.2.10.2
V1298 5248G>T missense_variant ORF1ab_pp1a V1750L 9.88e-1 BA.2.10.2
V130 82G>T missense_variant ORF1ab_pp1a V28L 9.88e-1 BA.2.10.2
V132 86G>T missense_variant ORF1ab_pp1a R29L 9.88e-1 BA.2.10.2
V1345 5548G>T missense_variant ORF1ab_pp1a G1850C 9.98e-1 BA.2.10.2
V1374 5767G>T missense_variant ORF1ab_pp1a A1923S 1.00e+0 BA.2.10.2
V139 103G>T missense_variant ORF1ab_pp1a V35L 9.95e-1 BA.2.10.2
V1409 6032G>T missense_variant ORF1ab_pp1a R2011L 9.95e-1 BA.2.10.2
V1432 6097G>T missense_variant ORF1ab_pp1a A2033S 9.98e-1 BA.2.10.2
V1439 6124G>T stop_gained ORF1ab_pp1a E2042* 9.98e-1 BA.2.10.2
V1458 6181G>T missense_variant ORF1ab_pp1a V2061F 9.95e-1 BA.2.10.2
V146 128G>T missense_variant ORF1ab_pp1a R43L 9.98e-1 BA.2.10.2
V1464 6208G>T stop_gained ORF1ab_pp1a E2070* 9.98e-1 BA.2.10.2
V1544 6476G>T missense_variant ORF1ab_pp1a R2159L 9.98e-1 BA.2.10.2
V1546 6488G>T missense_variant ORF1ab_pp1a R2163L 9.98e-1 BA.2.10.2
V1565 6619G>T missense_variant ORF1ab_pp1a G2207C 9.98e-1 BA.2.10.2
V1578 6742G>T missense_variant ORF1ab_pp1a A2248S 9.98e-1 BA.2.10.2
V162 178G>T missense_variant ORF1ab_pp1a V60F 9.98e-1 BA.2.10.2
V1644 7207G>T missense_variant ORF1ab_pp1a G2403C 9.98e-1 BA.2.10.2
V1649 7244G>T missense_variant ORF1ab_pp1a R2415L 9.98e-1 BA.2.10.2
V1651 7264G>T stop_gained ORF1ab_pp1a E2422* 9.98e-1 BA.2.10.2
V1662 7471G>T missense_variant ORF1ab_pp1a V2491F 9.98e-1 BA.2.10.2
V168 218G>T missense_variant ORF1ab_pp1a R73L 9.98e-1 BA.2.10.2
V1712 7783G>T missense_variant ORF1ab_pp1a V2595F 9.98e-1 BA.2.10.2
V1716 7810G>T missense_variant ORF1ab_pp1a V2604L 9.98e-1 BA.2.10.2
V1743 7913G>T missense_variant ORF1ab_pp1a R2638L 9.98e-1 BA.2.10.2
V175 230G>T missense_variant ORF1ab_pp1a R77L 9.98e-1 BA.2.10.2
V1753 8002G>T missense_variant ORF1ab_pp1a D2668Y 9.98e-1 BA.2.10.2
V1760 8057G>T missense_variant ORF1ab_pp1a R2686L 9.98e-1 BA.2.10.2
V1766 8090G>T missense_variant ORF1ab_pp1a R2697L 9.98e-1 BA.2.10.2
V1774 8143G>T missense_variant ORF1ab_pp1a V2715F 9.98e-1 BA.2.10.2
V1777 8177G>T missense_variant ORF1ab_pp1a R2726L 9.98e-1 BA.2.10.2
V1778 8189G>T missense_variant ORF1ab_pp1a R2730L 9.98e-1 BA.2.10.2
V1819 8453G>T missense_variant ORF1ab_pp1a R2818L 9.98e-1 BA.2.10.2
V1829 8522G>T missense_variant ORF1ab_pp1a R2841L 9.98e-1 BA.2.10.2
V1846 8596G>T missense_variant ORF1ab_pp1a V2866L 9.98e-1 BA.2.10.2
V1857 8624G>T missense_variant ORF1ab_pp1a R2875L 9.98e-1 BA.2.10.2
V1883 8846G>T missense_variant ORF1ab_pp1a R2949L 9.98e-1 BA.2.10.2
V1886 8858G>T missense_variant ORF1ab_pp1a R2953L 9.98e-1 BA.2.10.2
V1900 8959G>T missense_variant ORF1ab_pp1a G2987C 9.98e-1 BA.2.10.2
V1961 9491G>T missense_variant ORF1ab_pp1a R3164L 9.98e-1 BA.2.10.2
V1964 9581G>T missense_variant ORF1ab_pp1a R3194L 9.98e-1 BA.2.10.2
V1979 9703G>T missense_variant ORF1ab_pp1a A3235S 9.95e-1 BA.2.10.2
V1993 9874G>T missense_variant ORF1ab_pp1a G3292C 9.28e-1 BA.2.10.2
V1997 9892G>T missense_variant ORF1ab_pp1a V3298L 8.95e-1 BA.2.10.2
V2005 9968G>T missense_variant ORF1ab_pp1a R3323L 7.79e-1 BA.2.10.2
V2030 10103G>T missense_variant ORF1ab_pp1a R3368L 8.72e-1 BA.2.10.2
V2055 10417G>T missense_variant ORF1ab_pp1a A3473S 9.98e-1 BA.2.10.2
V2060 10454G>T missense_variant ORF1ab_pp1a R3485L 9.98e-1 BA.2.10.2
V207 277G>T stop_gained ORF1ab_pp1a E93* 9.98e-1 BA.2.10.2
V2079 10570G>T missense_variant ORF1ab_pp1a V3524F 9.98e-1 BA.2.10.2
V2087 10625G>T missense_variant ORF1ab_pp1a R3542L 9.98e-1 BA.2.10.2
V21 -165G>T upstream_gene_variant ORF1ab_pp1a None 9.46e-1 BA.2.10.2
V212 292G>T missense_variant ORF1ab_pp1a G98C 9.98e-1 BA.2.10.2
V215 296G>T missense_variant ORF1ab_pp1a R99L 9.98e-1 BA.2.10.2
V2151 10985G>T missense_variant ORF1ab_pp1a R3662L 9.88e-1 BA.2.10.2
V2161 11023_11026delTCTG frameshift_variant ORF1ab_pp1a S3675fs 8.42e-1 BA.2.10.2
V2163 11023_11031delTCTGGTTTT conservative_inframe_deletion ORF1ab_pp1a S3675_F3677del -9.39e-1 BA.2.10.2
V2188 11152G>T missense_variant ORF1ab_pp1a V3718F 9.98e-1 BA.2.10.2
V2238 11405G>T missense_variant ORF1ab_pp1a R3802L 9.98e-1 BA.2.10.2
V228 337G>T stop_gained ORF1ab_pp1a E113* 9.98e-1 BA.2.10.2
V2310 11978G>T missense_variant ORF1ab_pp1a R3993L 9.98e-1 BA.2.10.2
V2313 11996G>T missense_variant ORF1ab_pp1a R3999L 9.98e-1 BA.2.10.2
V2358 12449G>T missense_variant ORF1ab_pp1a R4150L 9.98e-1 BA.2.10.2
V2362 12469G>T missense_variant ORF1ab_pp1a G4157C 9.98e-1 BA.2.10.2
V2386 12559G>T missense_variant ORF1ab_pp1a D4187Y 9.98e-1 BA.2.10.2
V239 356G>T missense_variant ORF1ab_pp1a R119L 9.98e-1 BA.2.10.2
V2406 12752G>T missense_variant ORF1ab_pp1a R4251L 9.98e-1 BA.2.10.2
V2424 12992G>T missense_variant ORF1ab_pp1a R4331L 9.98e-1 BA.2.10.2
V243 371G>T missense_variant ORF1ab_pp1a R124L 9.98e-1 BA.2.10.2
V2438 13114G>T missense_variant ORF1ab_pp1a V4372F 9.95e-1 BA.2.10.2
V2439 13120G>T missense_variant ORF1ab_pp1a G4374C 9.95e-1 BA.2.10.2
V2445 13160G>T missense_variant ORF1ab_pp1a R4387L 9.93e-1 BA.2.10.2
V2446 13162G>T stop_gained ORF1ab_pp1a E4388* 9.93e-1 BA.2.10.2
V245 379G>T missense_variant ORF1ab_pp1a G127C 9.98e-1 BA.2.10.2
V2452 13204G>T missense_variant ORF1ab_pp1a G4402W 9.93e-1 BA.2.10.2
V2453 13213G>T missense_variant ORF1ab_pp1ab G4405C 9.93e-1 BA.2.10.2
V2456 13229G>T missense_variant ORF1ab_pp1ab R4410L 9.93e-1 BA.2.10.2
V2459 13243G>T missense_variant ORF1ab_pp1ab G4415C 9.93e-1 BA.2.10.2
V2463 13267G>T missense_variant ORF1ab_pp1ab V4423L 9.93e-1 BA.2.10.2
V2470 13340G>T missense_variant ORF1ab_pp1ab R4447L 9.98e-1 BA.2.10.2
V2474 13357G>T stop_gained ORF1ab_pp1ab E4453* 9.98e-1 BA.2.10.2
V2496 13498G>T missense_variant ORF1ab_pp1ab G4500C 9.98e-1 BA.2.10.2
V2500 13523G>T missense_variant ORF1ab_pp1ab R4508L 9.98e-1 BA.2.10.2
V2503 13529G>T missense_variant ORF1ab_pp1ab R4510L 9.98e-1 BA.2.10.2
V2507 13558G>T missense_variant ORF1ab_pp1ab V4520F 9.98e-1 BA.2.10.2
V251 409G>T missense_variant ORF1ab_pp1a G137C 9.98e-1 BA.2.10.2
V2528 13694G>T missense_variant ORF1ab_pp1ab R4565L 9.98e-1 BA.2.10.2
V2529 13696G>T missense_variant ORF1ab_pp1ab V4566L 9.98e-1 BA.2.10.2
V2532 13702G>T missense_variant ORF1ab_pp1ab A4568S 9.98e-1 BA.2.10.2
V2534 13718G>T missense_variant ORF1ab_pp1ab R4573L 9.98e-1 BA.2.10.2
V2535 13724G>T missense_variant ORF1ab_pp1ab R4575L 9.98e-1 BA.2.10.2
V2540 13766G>T missense_variant ORF1ab_pp1ab R4589L 9.98e-1 BA.2.10.2
V2543 13834G>T missense_variant ORF1ab_pp1ab G4612C 9.98e-1 BA.2.10.2
V255 412G>T missense_variant ORF1ab_pp1a A138S 9.98e-1 BA.2.10.2
V257 415G>T missense_variant ORF1ab_pp1a D139Y 9.98e-1 BA.2.10.2
V2584 14030G>T missense_variant ORF1ab_pp1ab R4677L 9.98e-1 BA.2.10.2
V2612 14320G>T missense_variant ORF1ab_pp1ab A4774S 9.98e-1 BA.2.10.2
V2615 14351G>T missense_variant ORF1ab_pp1ab R4784L 9.98e-1 BA.2.10.2
V2620 14413G>T missense_variant ORF1ab_pp1ab G4805C 9.98e-1 BA.2.10.2
V2631 14530G>T missense_variant ORF1ab_pp1ab D4844Y 9.98e-1 BA.2.10.2
V2632 14546G>T missense_variant ORF1ab_pp1ab R4849L 9.98e-1 BA.2.10.2
V2641 14659G>T missense_variant ORF1ab_pp1ab V4887F 9.98e-1 BA.2.10.2
V2652 14761G>T missense_variant ORF1ab_pp1ab A4921S 9.95e-1 BA.2.10.2
V2654 14774G>T missense_variant ORF1ab_pp1ab R4925L 9.95e-1 BA.2.10.2
V2656 14840G>T missense_variant ORF1ab_pp1ab R4947L 9.95e-1 BA.2.10.2
V2657 14845G>T missense_variant ORF1ab_pp1ab V4949L 9.95e-1 BA.2.10.2
V2660 14917G>T missense_variant ORF1ab_pp1ab A4973S 9.95e-1 BA.2.10.2
V2680 15095G>T missense_variant ORF1ab_pp1ab R5032L 9.98e-1 BA.2.10.2
V2687 15128G>T missense_variant ORF1ab_pp1ab R5043L 9.98e-1 BA.2.10.2
V269 439G>T missense_variant ORF1ab_pp1a D147Y 9.98e-1 BA.2.10.2
V2695 15187G>T missense_variant ORF1ab_pp1ab G5063C 9.95e-1 BA.2.10.2
V270 442G>T stop_gained ORF1ab_pp1a E148* 9.98e-1 BA.2.10.2
V2702 15325G>T missense_variant ORF1ab_pp1ab D5109Y 9.98e-1 BA.2.10.2
V2706 15338G>T missense_variant ORF1ab_pp1ab R5113L 9.98e-1 BA.2.10.2
V2715 15415G>T missense_variant ORF1ab_pp1ab A5139S 9.98e-1 BA.2.10.2
V2716 15425G>T missense_variant ORF1ab_pp1ab R5142L 9.98e-1 BA.2.10.2
V2719 15457G>T missense_variant ORF1ab_pp1ab D5153Y 9.98e-1 BA.2.10.2
V2743 15697G>T missense_variant ORF1ab_pp1ab G5233C 9.98e-1 BA.2.10.2
V2745 15718G>T missense_variant ORF1ab_pp1ab V5240L 9.98e-1 BA.2.10.2
V2746 15749G>T missense_variant ORF1ab_pp1ab R5250L 9.98e-1 BA.2.10.2
V2747 15754G>T missense_variant ORF1ab_pp1ab V5252L 9.98e-1 BA.2.10.2
V2772 16034G>T missense_variant ORF1ab_pp1ab R5345L 9.95e-1 BA.2.10.2
V2796 16273G>T missense_variant ORF1ab_pp1ab D5425Y 9.95e-1 BA.2.10.2
V2812 16436G>T missense_variant ORF1ab_pp1ab R5479L 9.98e-1 BA.2.10.2
V2822 16505G>T missense_variant ORF1ab_pp1ab R5502L 9.98e-1 BA.2.10.2
V2823 16529G>T missense_variant ORF1ab_pp1ab R5510L 9.98e-1 BA.2.10.2
V2834 16607G>T missense_variant ORF1ab_pp1ab R5536L 9.95e-1 BA.2.10.2
V285 512G>T missense_variant ORF1ab_pp1a R171L 9.98e-1 BA.2.10.2
V287 524G>T missense_variant ORF1ab_pp1a R175L 9.98e-1 BA.2.10.2
V2880 16880G>T missense_variant ORF1ab_pp1ab R5627L 9.98e-1 BA.2.10.2
V2884 16909G>T missense_variant ORF1ab_pp1ab A5637S 9.98e-1 BA.2.10.2
V289 535G>T stop_gained ORF1ab_pp1a G179* 9.98e-1 BA.2.10.2
V2894 16982G>T missense_variant ORF1ab_pp1ab R5661L 9.98e-1 BA.2.10.2
V2896 16988G>T missense_variant ORF1ab_pp1ab R5663L 9.98e-1 BA.2.10.2
V29 -142G>T upstream_gene_variant ORF1ab_pp1a None 9.61e-1 BA.2.10.2
V2919 17173G>T missense_variant ORF1ab_pp1ab D5725Y 9.88e-1 BA.2.10.2
V2923 17198G>T missense_variant ORF1ab_pp1ab R5733L 9.90e-1 BA.2.10.2
V2933 17287G>T stop_gained ORF1ab_pp1ab G5763* 9.95e-1 BA.2.10.2
V2935 17297G>T missense_variant ORF1ab_pp1ab R5766L 9.98e-1 BA.2.10.2
V2936 17300G>T missense_variant ORF1ab_pp1ab R5767L 9.98e-1 BA.2.10.2
V2956 17455G>T missense_variant ORF1ab_pp1ab V5819L 9.98e-1 BA.2.10.2
V296 551G>T missense_variant ORF1ab_pp1a R184L 9.98e-1 BA.2.10.2
V2960 17477G>T missense_variant ORF1ab_pp1ab R5826L 9.98e-1 BA.2.10.2
V297 559G>T missense_variant ORF1ab_pp1a D187Y 9.98e-1 BA.2.10.2
V2992 17753G>T missense_variant ORF1ab_pp1ab R5918L 9.95e-1 BA.2.10.2
V3015 17899A>G missense_variant ORF1ab_pp1ab I5967V -9.88e-1 BA.2.10.2
V3016 17899A>T missense_variant ORF1ab_pp1ab I5967L 9.76e-1 BA.2.10.2
V3039 18002G>T missense_variant ORF1ab_pp1ab R6001L 9.98e-1 BA.2.10.2
V3040 18004G>T stop_gained ORF1ab_pp1ab E6002* 9.98e-1 BA.2.10.2
V3045 18026G>T missense_variant ORF1ab_pp1ab R6009L 9.98e-1 BA.2.10.2
V3048 18043G>T missense_variant ORF1ab_pp1ab D6015Y 9.98e-1 BA.2.10.2
V3049 18049G>T stop_gained ORF1ab_pp1ab E6017* 9.98e-1 BA.2.10.2
V3085 18263G>T missense_variant ORF1ab_pp1ab R6088L 9.98e-1 BA.2.10.2
V3092 18319G>T missense_variant ORF1ab_pp1ab V6107L 9.98e-1 BA.2.10.2
V3102 18389G>T missense_variant ORF1ab_pp1ab R6130L 9.98e-1 BA.2.10.2
V3105 18413G>T missense_variant ORF1ab_pp1ab R6138L 9.98e-1 BA.2.10.2
V311 620G>T missense_variant ORF1ab_pp1a R207L 9.98e-1 BA.2.10.2
V3115 18481G>T missense_variant ORF1ab_pp1ab V6161F 9.98e-1 BA.2.10.2
V3130 18625G>T stop_gained ORF1ab_pp1ab E6209* 9.98e-1 BA.2.10.2
V3135 18641G>T missense_variant ORF1ab_pp1ab R6214L 9.98e-1 BA.2.10.2
V3187 18943G>T missense_variant ORF1ab_pp1ab D6315Y 9.88e-1 BA.2.10.2
V321 649G>T stop_gained ORF1ab_pp1a E217* 9.98e-1 BA.2.10.2
V3216 19202G>T missense_variant ORF1ab_pp1ab R6401L 9.71e-1 BA.2.10.2
V3220 19261G>T missense_variant ORF1ab_pp1ab D6421Y 9.78e-1 BA.2.10.2
V3254 19538G>T missense_variant ORF1ab_pp1ab R6513L 9.98e-1 BA.2.10.2
V3293 19769G>T missense_variant ORF1ab_pp1ab R6590L 9.98e-1 BA.2.10.2
V3310 19870G>T missense_variant ORF1ab_pp1ab V6624L 9.95e-1 BA.2.10.2
V332 695G>T missense_variant ORF1ab_pp1a R232L 9.98e-1 BA.2.10.2
V3331 20027G>T missense_variant ORF1ab_pp1ab R6676L 9.98e-1 BA.2.10.2
V3334 20053G>T stop_gained ORF1ab_pp1ab E6685* 9.98e-1 BA.2.10.2
V3338 20062G>T missense_variant ORF1ab_pp1ab V6688F 9.98e-1 BA.2.10.2
V3345 20126G>T missense_variant ORF1ab_pp1ab R6709L 9.98e-1 BA.2.10.2
V336 731G>T missense_variant ORF1ab_pp1a R244L 9.98e-1 BA.2.10.2
V3415 20527G>T missense_variant ORF1ab_pp1ab A6843S 9.98e-1 BA.2.10.2
V3428 20683G>T missense_variant ORF1ab_pp1ab D6895Y 9.95e-1 BA.2.10.2
V3444 20791G>T missense_variant ORF1ab_pp1ab D6931Y 9.93e-1 BA.2.10.2
V3462 20893G>T missense_variant ORF1ab_pp1ab V6965L 9.76e-1 BA.2.10.2
V3475 20956G>T missense_variant ORF1ab_pp1ab A6986S 9.56e-1 BA.2.10.2
V3487 21041G>T missense_variant ORF1ab_pp1ab R7014L 9.41e-1 BA.2.10.2
V3488 21043G>T stop_gained ORF1ab_pp1ab E7015* 9.46e-1 BA.2.10.2
V3517 -5G>T upstream_gene_variant S None 9.98e-1 BA.2.10.2
V353 841A>G missense_variant ORF1ab_pp1a I281V -7.73e-1 BA.2.10.2
V3562 101G>T missense_variant S R34L 9.95e-1 BA.2.10.2
V3621 367G>T missense_variant S A123S 9.98e-1 BA.2.10.2
V3635 425G>A missense_variant S G142D -9.19e-1 BA.2.10.2
V370 902G>T missense_variant ORF1ab_pp1a R301L 9.98e-1 BA.2.10.2
V3737 641G>T missense_variant S R214L 9.98e-1 BA.2.10.2
V38 -114G>T upstream_gene_variant ORF1ab_pp1a None 9.71e-1 BA.2.10.2
V3822 1030G>T missense_variant S A344S 9.71e-1 BA.2.10.2
V3844 1126A>G missense_variant S T376A -9.81e-1 BA.2.10.2
V3857 1231G>T missense_variant S A411S 9.73e-1 BA.2.10.2
V3868 1320T>G missense_variant S N440K -9.43e-1 BA.2.10.2
V3922 1478A>G missense_variant S Q493R -9.61e-1 BA.2.10.2
V3923 1478A>T missense_variant S Q493L 8.93e-1 BA.2.10.2
V3926 1493A>G missense_variant S Q498R -9.63e-1 BA.2.10.2
V3959 1730G>T missense_variant S R577L 9.93e-1 BA.2.10.2
V396 1003G>T missense_variant ORF1ab_pp1a D335Y 9.98e-1 BA.2.10.2
V3985 1901G>T missense_variant S R634L 9.95e-1 BA.2.10.2
V3991 1937G>T missense_variant S R646L 9.95e-1 BA.2.10.2
V4005 2014G>T missense_variant S A672S 9.95e-1 BA.2.10.2
V401 1024G>T stop_gained ORF1ab_pp1a E342* 9.98e-1 BA.2.10.2
V4025 2045G>T missense_variant S R682L 9.95e-1 BA.2.10.2
V4026 2048G>T missense_variant S R683L 9.95e-1 BA.2.10.2
V4029 2054G>T missense_variant S R685L 9.95e-1 BA.2.10.2
V4065 2294G>T missense_variant S R765L 9.88e-1 BA.2.10.2
V41 -101G>T upstream_gene_variant ORF1ab_pp1a None 8.34e-1 BA.2.10.2
V4109 2569G>T missense_variant S G857C 9.98e-1 BA.2.10.2
V4150 2948G>T missense_variant S R983L 9.95e-1 BA.2.10.2
V4185 3272G>T missense_variant S R1091L 9.98e-1 BA.2.10.2
V4235 3554G>T missense_variant S R1185L 9.81e-1 BA.2.10.2
V4244 3595G>T missense_variant S D1199Y 9.88e-1 BA.2.10.2
V4289 3778G>T missense_variant S D1260Y 9.98e-1 BA.2.10.2
V4302 -6G>T upstream_gene_variant ORF3a None 9.98e-1 BA.2.10.2
V4345 89G>T missense_variant ORF3a R30L 9.98e-1 BA.2.10.2
V4347 91G>T missense_variant ORF3a A31S 9.98e-1 BA.2.10.2
V437 1156G>T stop_gained ORF1ab_pp1a E386* 9.98e-1 BA.2.10.2
V4379 130G>T stop_gained ORF3a G44* 9.98e-1 BA.2.10.2
V4391 148G>T missense_variant ORF3a V50F 9.98e-1 BA.2.10.2
V4410 175G>T missense_variant ORF3a A59S 9.98e-1 BA.2.10.2
V4459 289G>T missense_variant ORF3a V97F 9.98e-1 BA.2.10.2
V446 1193G>T missense_variant ORF1ab_pp1a R398L 9.98e-1 BA.2.10.2
V4512 401G>T missense_variant ORF3a R134L 9.98e-1 BA.2.10.2
V4524 463G>T missense_variant ORF3a D155Y 9.98e-1 BA.2.10.2
V453 1205G>T missense_variant ORF1ab_pp1a R402L 9.98e-1 BA.2.10.2
V4614 751G>T missense_variant ORF3a G251C 9.95e-1 BA.2.10.2
V4620 760G>T stop_gained ORF3a G254* 9.93e-1 BA.2.10.2
V464 1277G>T missense_variant ORF1ab_pp1a R426L 9.98e-1 BA.2.10.2
V4652 817G>T missense_variant ORF3a V273L 9.93e-1 BA.2.10.2
V4672 70G>T missense_variant E V24L 9.93e-1 BA.2.10.2
V4678 145G>T missense_variant E V49L 9.93e-1 BA.2.10.2
V4685 172G>T missense_variant E V58F 9.93e-1 BA.2.10.2
V469 1285G>T missense_variant ORF1ab_pp1a A429S 9.98e-1 BA.2.10.2
V4722 16G>T missense_variant M G6C 9.90e-1 BA.2.10.2
V4729 55C>G missense_variant M Q19E -8.31e-1 BA.2.10.2
V4757 232G>T missense_variant M G78C 9.81e-1 BA.2.10.2
V4763 247G>T missense_variant M A83S 9.81e-1 BA.2.10.2
V4772 320G>T missense_variant M R107L 9.81e-1 BA.2.10.2
V4782 473G>T missense_variant M R158L 9.73e-1 BA.2.10.2
V4784 521G>T missense_variant M R174L 9.83e-1 BA.2.10.2
V4788 593G>T missense_variant M R198L 9.88e-1 BA.2.10.2
V48 -92G>T upstream_gene_variant ORF1ab_pp1a None 9.71e-1 BA.2.10.2
V4800 13G>T missense_variant ORF6 V5F 9.90e-1 BA.2.10.2
V4812 59G>T missense_variant ORF6 R20M 9.95e-1 BA.2.10.2
V484 1330G>T stop_gained ORF1ab_pp1a E444* 9.98e-1 BA.2.10.2
V4844 -4G>T upstream_gene_variant ORF7a None 9.95e-1 BA.2.10.2
V4864 37G>T missense_variant ORF7a A13S 9.95e-1 BA.2.10.2
V4895 121G>T stop_gained ORF7a E41* 9.98e-1 BA.2.10.2
V4930 208G>T missense_variant ORF7a G70C 9.98e-1 BA.2.10.2
V4932 211G>T missense_variant ORF7a V71L 9.98e-1 BA.2.10.2
V4937 220G>T missense_variant ORF7a V74F 9.98e-1 BA.2.10.2
V4943 233G>T missense_variant ORF7a R78L 9.98e-1 BA.2.10.2
V5056 127G>T missense_variant ORF7b A43S 6.35e-1 BA.2.10.2
V5061 -4G>T upstream_gene_variant ORF8 None 6.28e-1 BA.2.10.2
V511 1420G>T missense_variant ORF1ab_pp1a A474S 9.98e-1 BA.2.10.2
V5144 184G>T missense_variant ORF8 V62L 7.64e-1 BA.2.10.2
V5173 223G>T missense_variant ORF8 D75Y 9.08e-1 BA.2.10.2
V5176 229G>T missense_variant ORF8 G77C 9.16e-1 BA.2.10.2
V5196 302G>T missense_variant ORF8 R101L 9.88e-1 BA.2.10.2
V5209 340G>T missense_variant ORF8 V114F 9.88e-1 BA.2.10.2
V5212 344G>T missense_variant ORF8 R115L 9.90e-1 BA.2.10.2
V5234 -12G>T upstream_gene_variant N None 9.93e-1 BA.2.10.2
V5266 29G>T missense_variant N R10L 9.93e-1 BA.2.10.2
V5277 41G>T missense_variant N R14L 9.93e-1 BA.2.10.2
V5305 90_98delAGAACGCAG disruptive_inframe_deletion N E31_S33del -9.14e-1 BA.2.10.2
V5308 90_97delAGAACGCA frameshift_variant N E31fs 8.66e-1 BA.2.10.2
V5324 107G>T missense_variant N R36L 9.93e-1 BA.2.10.2
V5331 119G>T missense_variant N R40L 9.93e-1 BA.2.10.2
V5333 122G>T missense_variant N R41L 9.93e-1 BA.2.10.2
V5337 163G>T missense_variant N A55S 9.98e-1 BA.2.10.2
V5345 203G>T missense_variant N R68L 9.98e-1 BA.2.10.2
V5349 214G>T missense_variant N V72F 9.98e-1 BA.2.10.2
V5355 263G>T missense_variant N R88L 9.98e-1 BA.2.10.2
V5359 278G>T missense_variant N R93L 9.98e-1 BA.2.10.2
V5361 284G>T missense_variant N R95L 9.95e-1 BA.2.10.2
V5364 295G>T missense_variant N G99C 9.98e-1 BA.2.10.2
V5379 385G>T missense_variant N G129C 9.95e-1 BA.2.10.2
V5395 446G>T missense_variant N R149L 9.98e-1 BA.2.10.2
V5404 472G>T missense_variant N V158L 9.98e-1 BA.2.10.2
V5414 517G>T missense_variant N A173S 9.98e-1 BA.2.10.2
V5419 535G>T missense_variant N G179C 9.98e-1 BA.2.10.2
V5429 554G>T missense_variant N R185L 9.98e-1 BA.2.10.2
V5434 566G>T missense_variant N R189L 9.98e-1 BA.2.10.2
V5437 572G>T missense_variant N R191L 9.98e-1 BA.2.10.2
V5467 611G>T missense_variant N G204V 9.95e-1 BA.2.10.2
V5496 643G>T missense_variant N G215C 9.95e-1 BA.2.10.2
V5536 776G>T missense_variant N R259L 9.95e-1 BA.2.10.2
V5537 785G>T missense_variant N R262L 9.95e-1 BA.2.10.2
V554 1625G>T missense_variant ORF1ab_pp1a R542L 9.95e-1 BA.2.10.2
V5546 823G>T missense_variant N G275C 9.95e-1 BA.2.10.2
V5547 830G>T missense_variant N R277L 9.95e-1 BA.2.10.2
V556 1634G>T missense_variant ORF1ab_pp1a R545L 9.95e-1 BA.2.10.2
V5565 931G>T missense_variant N A311S 9.95e-1 BA.2.10.2
V5566 946G>T stop_gained N G316* 9.95e-1 BA.2.10.2
V5570 956G>T missense_variant N R319L 9.95e-1 BA.2.10.2
V5594 1075G>T missense_variant N A359S 9.98e-1 BA.2.10.2
V563 1649G>T missense_variant ORF1ab_pp1a R550L 9.95e-1 BA.2.10.2
V5652 1238G>T missense_variant N S413I 9.90e-1 BA.2.10.2
V5688 16G>T missense_variant ORF10 V6F 9.83e-1 BA.2.10.2
V5690 22G>T missense_variant ORF10 A8S 9.76e-1 BA.2.10.2
V5708 71G>T missense_variant ORF10 R24L 9.63e-1 BA.2.10.2
V574 1679G>T missense_variant ORF1ab_pp1a R560L 9.95e-1 BA.2.10.2
V581 1696G>T missense_variant ORF1ab_pp1a A566S 9.95e-1 BA.2.10.2
V5875 222G>T synonymous_variant ORF1ab_pp1a S74S 9.98e-1 BA.2.10.2
V5970 726G>T synonymous_variant ORF1ab_pp1a T242T 9.95e-1 BA.2.10.2
V5998 921G>T synonymous_variant ORF1ab_pp1a A307A 9.98e-1 BA.2.10.2
V6010 999G>T synonymous_variant ORF1ab_pp1a T333T 9.98e-1 BA.2.10.2
V61 -68G>T upstream_gene_variant ORF1ab_pp1a None 9.76e-1 BA.2.10.2
V6121 1830G>T synonymous_variant ORF1ab_pp1a S610S 9.98e-1 BA.2.10.2
V6165 2133G>T synonymous_variant ORF1ab_pp1a T711T 9.98e-1 BA.2.10.2
V631 1879G>T missense_variant ORF1ab_pp1a V627F 9.98e-1 BA.2.10.2
V6413 3942G>T synonymous_variant ORF1ab_pp1a A1314A 9.95e-1 BA.2.10.2
V6420 3990G>T synonymous_variant ORF1ab_pp1a P1330P 9.95e-1 BA.2.10.2
V643 1933G>T missense_variant ORF1ab_pp1a G645C 9.86e-1 BA.2.10.2
V6481 4455G>T synonymous_variant ORF1ab_pp1a A1485A 9.90e-1 BA.2.10.2
V6521 4743G>T synonymous_variant ORF1ab_pp1a T1581T 9.98e-1 BA.2.10.2
V657 1981G>T missense_variant ORF1ab_pp1a G661C 9.98e-1 BA.2.10.2
V6610 5364G>T synonymous_variant ORF1ab_pp1a T1788T 9.98e-1 BA.2.10.2
V6634 5592G>T synonymous_variant ORF1ab_pp1a T1864T 9.98e-1 BA.2.10.2
V6686 6006G>T synonymous_variant ORF1ab_pp1a T2002T 9.95e-1 BA.2.10.2
V6695 6072G>T synonymous_variant ORF1ab_pp1a S2024S 9.95e-1 BA.2.10.2
V6704 6099G>T synonymous_variant ORF1ab_pp1a A2033A 9.98e-1 BA.2.10.2
V6765 6585G>T synonymous_variant ORF1ab_pp1a P2195P 9.98e-1 BA.2.10.2
V6830 7128G>T synonymous_variant ORF1ab_pp1a P2376P 9.98e-1 BA.2.10.2
V6859 7410G>T synonymous_variant ORF1ab_pp1a A2470A 9.98e-1 BA.2.10.2
V6890 7671G>T synonymous_variant ORF1ab_pp1a A2557A 9.98e-1 BA.2.10.2
V69 -62G>T upstream_gene_variant ORF1ab_pp1a None 9.76e-1 BA.2.10.2
V6900 7752G>T synonymous_variant ORF1ab_pp1a A2584A 9.98e-1 BA.2.10.2
V6908 7791G>T synonymous_variant ORF1ab_pp1a T2597T 9.98e-1 BA.2.10.2
V6950 8088G>T synonymous_variant ORF1ab_pp1a A2696A 9.95e-1 BA.2.10.2
V6952 8103G>T synonymous_variant ORF1ab_pp1a A2701A 9.98e-1 BA.2.10.2
V7125 9537G>T synonymous_variant ORF1ab_pp1a A3179A 9.72e-1 BA.2.10.2
V7140 9606G>T synonymous_variant ORF1ab_pp1a T3202T 9.98e-1 BA.2.10.2
V72 -58G>T upstream_gene_variant ORF1ab_pp1a None 9.76e-1 BA.2.10.2
V7246 10377G>T synonymous_variant ORF1ab_pp1a T3459T 9.98e-1 BA.2.10.2
V747 2359G>T missense_variant ORF1ab_pp1a G787W 9.98e-1 BA.2.10.2
V7480 12249G>T synonymous_variant ORF1ab_pp1a T4083T 9.95e-1 BA.2.10.2
V7502 12504G>T synonymous_variant ORF1ab_pp1a A4168A 9.88e-1 BA.2.10.2
V752 2374G>T stop_gained ORF1ab_pp1a E792* 9.98e-1 BA.2.10.2
V7559 12936G>T synonymous_variant ORF1ab_pp1a P4312P 9.98e-1 BA.2.10.2
V7567 12975G>T synonymous_variant ORF1ab_pp1a S4325S 9.98e-1 BA.2.10.2
V7602 13194G>T synonymous_variant ORF1ab_pp1a S4398S 9.90e-1 BA.2.10.2
V7604 13239G>T synonymous_variant ORF1ab_pp1ab P4413P 9.93e-1 BA.2.10.2
V762 2452G>T missense_variant ORF1ab_pp1a G818C 9.98e-1 BA.2.10.2
V7677 13854G>T synonymous_variant ORF1ab_pp1ab T4618T 9.98e-1 BA.2.10.2
V7699 14004G>T synonymous_variant ORF1ab_pp1ab T4668T 9.98e-1 BA.2.10.2
V7751 14358G>T synonymous_variant ORF1ab_pp1ab T4786T 9.93e-1 BA.2.10.2
V782 2593G>T missense_variant ORF1ab_pp1a G865C 9.98e-1 BA.2.10.2
V7846 15108G>T synonymous_variant ORF1ab_pp1ab T5036T 9.98e-1 BA.2.10.2
V7869 15279G>T synonymous_variant ORF1ab_pp1ab T5093T 9.98e-1 BA.2.10.2
V787 2614G>T missense_variant ORF1ab_pp1a A872S 9.98e-1 BA.2.10.2
V7951 15957G>T synonymous_variant ORF1ab_pp1ab P5319P 9.98e-1 BA.2.10.2
V7974 16113G>T synonymous_variant ORF1ab_pp1ab P5371P 9.88e-1 BA.2.10.2
V8011 16383G>T synonymous_variant ORF1ab_pp1ab T5461T 9.98e-1 BA.2.10.2
V81 -47G>T upstream_gene_variant ORF1ab_pp1a None 9.76e-1 BA.2.10.2
V8101 17070G>T synonymous_variant ORF1ab_pp1ab T5690T 9.95e-1 BA.2.10.2
V8145 17415G>T synonymous_variant ORF1ab_pp1ab T5805T 9.52e-1 BA.2.10.2
V8252 18198G>T synonymous_variant ORF1ab_pp1ab P6066P 9.98e-1 BA.2.10.2
V8296 18492G>T synonymous_variant ORF1ab_pp1ab P6164P 9.98e-1 BA.2.10.2
V8328 18696G>T synonymous_variant ORF1ab_pp1ab A6232A 9.98e-1 BA.2.10.2
V8388 19191G>T synonymous_variant ORF1ab_pp1ab T6397T 9.71e-1 BA.2.10.2
V8446 19698G>T synonymous_variant ORF1ab_pp1ab T6566T 9.98e-1 BA.2.10.2
V8502 20205G>T synonymous_variant ORF1ab_pp1ab A6735A 9.98e-1 BA.2.10.2
V8519 20406G>T synonymous_variant ORF1ab_pp1ab A6802A 9.98e-1 BA.2.10.2
V8521 20415G>T synonymous_variant ORF1ab_pp1ab P6805P 9.98e-1 BA.2.10.2
V8547 20667G>T synonymous_variant ORF1ab_pp1ab T6889T 9.95e-1 BA.2.10.2
V8549 20673G>T synonymous_variant ORF1ab_pp1ab T6891T 9.95e-1 BA.2.10.2
V8592 20991G>T synonymous_variant ORF1ab_pp1ab A6997A 9.46e-1 BA.2.10.2
V8678 336G>T synonymous_variant S S112S 9.90e-1 BA.2.10.2
V8698 489G>T synonymous_variant S A163A 9.98e-1 BA.2.10.2
V8711 624G>T synonymous_variant S T208T 9.98e-1 BA.2.10.2
V8721 663G>T synonymous_variant S S221S 9.93e-1 BA.2.10.2
V8749 906G>T synonymous_variant S T302T 9.41e-1 BA.2.10.2
V882 2977G>T missense_variant ORF1ab_pp1a G993C 9.98e-1 BA.2.10.2
V8973 2637G>T synonymous_variant S A879A 9.76e-1 BA.2.10.2
V9003 2883G>T synonymous_variant S T961T 9.95e-1 BA.2.10.2
V9076 3438C>T synonymous_variant S D1146D -9.68e-1 BA.2.10.2
V9151 102G>T synonymous_variant ORF3a T34T 9.98e-1 BA.2.10.2
V9154 108G>T synonymous_variant ORF3a P36P 9.98e-1 BA.2.10.2
V9253 801G>T synonymous_variant ORF3a P267P 9.93e-1 BA.2.10.2
V9254 804G>T synonymous_variant ORF3a T268T 9.93e-1 BA.2.10.2
V9256 807G>T synonymous_variant ORF3a T269T 9.93e-1 BA.2.10.2
V9262 18G>T synonymous_variant E S6S 9.93e-1 BA.2.10.2
V9274 108G>T synonymous_variant E A36A 9.93e-1 BA.2.10.2
V9330 312G>T synonymous_variant M A104A 9.81e-1 BA.2.10.2
V9332 318G>T synonymous_variant M T106T 9.81e-1 BA.2.10.2
V9351 396G>T synonymous_variant M P132P 9.78e-1 BA.2.10.2
V9376 525G>T synonymous_variant M T175T 9.83e-1 BA.2.10.2
V9381 552G>T synonymous_variant M S184S 9.88e-1 BA.2.10.2
V9480 315G>T synonymous_variant ORF7a A105A 9.90e-1 BA.2.10.2
V9523 108G>T synonymous_variant ORF8 P36P 6.58e-1 BA.2.10.2
V9550 309G>T synonymous_variant ORF8 S103S 9.90e-1 BA.2.10.2
V9568 48G>T synonymous_variant N T16T 9.93e-1 BA.2.10.2
V9582 105G>T synonymous_variant N A35A 9.93e-1 BA.2.10.2
V9596 150G>T synonymous_variant N A50A 9.93e-1 BA.2.10.2
V9744 906G>T synonymous_variant N P302P 9.76e-1 BA.2.10.2
V9753 939G>T synonymous_variant N A313A 9.95e-1 BA.2.10.2
V9758 954G>T synonymous_variant N S318S 9.95e-1 BA.2.10.2
V9764 981G>T synonymous_variant N S327S 9.98e-1 BA.2.10.2
V9766 987G>T synonymous_variant N T329T 9.55e-1 BA.2.10.2
V978 3319G>T stop_gained ORF1ab_pp1a G1107* 9.98e-1 BA.2.10.2
V9797 1149G>T synonymous_variant N P383P 9.98e-1 BA.2.10.2
V9824 30G>T synonymous_variant ORF10 P10P 9.76e-1 BA.2.10.2
V9825 36G>T synonymous_variant ORF10 T12T 9.76e-1 BA.2.10.2
V988 3355G>T missense_variant ORF1ab_pp1a G1119C 9.98e-1 BA.2.10.2
V1002 3424G>T stop_gained ORF1ab_pp1a E1142* 1.00e+0 BA.2.12
V1026 3509G>T missense_variant ORF1ab_pp1a R1170L 1.00e+0 BA.2.12
V103 -20G>T upstream_gene_variant ORF1ab_pp1a None 1.00e+0 BA.2.12
V1047 3610G>T missense_variant ORF1ab_pp1a A1204S 1.00e+0 BA.2.12
V11 -194G>T upstream_gene_variant ORF1ab_pp1a None 1.00e+0 BA.2.12
V111 -10G>T upstream_gene_variant ORF1ab_pp1a None 8.16e-1 BA.2.12
V1133 4127G>T missense_variant ORF1ab_pp1a R1376L 1.00e+0 BA.2.12
V1139 4157G>T missense_variant ORF1ab_pp1a R1386L 1.00e+0 BA.2.12
V1146 4211G>T missense_variant ORF1ab_pp1a R1404L 1.00e+0 BA.2.12
V1159 4318G>T missense_variant ORF1ab_pp1a D1440Y 1.00e+0 BA.2.12
V1164 4391G>T missense_variant ORF1ab_pp1a R1464L 1.00e+0 BA.2.12
V118 28G>T stop_gained ORF1ab_pp1a E10* 1.00e+0 BA.2.12
V120 40G>T missense_variant ORF1ab_pp1a V14F 1.00e+0 BA.2.12
V124 71G>T missense_variant ORF1ab_pp1a R24L 1.00e+0 BA.2.12
V125 73G>T missense_variant ORF1ab_pp1a D25Y 1.00e+0 BA.2.12
V1252 4883G>T missense_variant ORF1ab_pp1a R1628L 1.00e+0 BA.2.12
V126 76G>T missense_variant ORF1ab_pp1a V26L 1.00e+0 BA.2.12
V1298 5248G>T missense_variant ORF1ab_pp1a V1750L 7.07e-1 BA.2.12
V130 82G>T missense_variant ORF1ab_pp1a V28L 1.00e+0 BA.2.12
V132 86G>T missense_variant ORF1ab_pp1a R29L 1.00e+0 BA.2.12
V1345 5548G>T missense_variant ORF1ab_pp1a G1850C 1.00e+0 BA.2.12
V1374 5767G>T missense_variant ORF1ab_pp1a A1923S 1.00e+0 BA.2.12
V139 103G>T missense_variant ORF1ab_pp1a V35L 1.00e+0 BA.2.12
V1409 6032G>T missense_variant ORF1ab_pp1a R2011L 1.00e+0 BA.2.12
V1432 6097G>T missense_variant ORF1ab_pp1a A2033S 1.00e+0 BA.2.12
V1439 6124G>T stop_gained ORF1ab_pp1a E2042* 1.00e+0 BA.2.12
V1458 6181G>T missense_variant ORF1ab_pp1a V2061F 8.16e-1 BA.2.12
V146 128G>T missense_variant ORF1ab_pp1a R43L 1.00e+0 BA.2.12
V1464 6208G>T stop_gained ORF1ab_pp1a E2070* 1.00e+0 BA.2.12
V1544 6476G>T missense_variant ORF1ab_pp1a R2159L 1.00e+0 BA.2.12
V1546 6488G>T missense_variant ORF1ab_pp1a R2163L 1.00e+0 BA.2.12
V1565 6619G>T missense_variant ORF1ab_pp1a G2207C 1.00e+0 BA.2.12
V1578 6742G>T missense_variant ORF1ab_pp1a A2248S 1.00e+0 BA.2.12
V162 178G>T missense_variant ORF1ab_pp1a V60F 1.00e+0 BA.2.12
V1644 7207G>T missense_variant ORF1ab_pp1a G2403C 1.00e+0 BA.2.12
V1649 7244G>T missense_variant ORF1ab_pp1a R2415L 1.00e+0 BA.2.12
V1651 7264G>T stop_gained ORF1ab_pp1a E2422* 1.00e+0 BA.2.12
V1662 7471G>T missense_variant ORF1ab_pp1a V2491F 1.00e+0 BA.2.12
V168 218G>T missense_variant ORF1ab_pp1a R73L 1.00e+0 BA.2.12
V1712 7783G>T missense_variant ORF1ab_pp1a V2595F 1.00e+0 BA.2.12
V1716 7810G>T missense_variant ORF1ab_pp1a V2604L 1.00e+0 BA.2.12
V1743 7913G>T missense_variant ORF1ab_pp1a R2638L 1.00e+0 BA.2.12
V175 230G>T missense_variant ORF1ab_pp1a R77L 1.00e+0 BA.2.12
V1753 8002G>T missense_variant ORF1ab_pp1a D2668Y 1.00e+0 BA.2.12
V1760 8057G>T missense_variant ORF1ab_pp1a R2686L 1.00e+0 BA.2.12
V1766 8090G>T missense_variant ORF1ab_pp1a R2697L 1.00e+0 BA.2.12
V1774 8143G>T missense_variant ORF1ab_pp1a V2715F 1.00e+0 BA.2.12
V1777 8177G>T missense_variant ORF1ab_pp1a R2726L 1.00e+0 BA.2.12
V1778 8189G>T missense_variant ORF1ab_pp1a R2730L 1.00e+0 BA.2.12
V1819 8453G>T missense_variant ORF1ab_pp1a R2818L 1.00e+0 BA.2.12
V1829 8522G>T missense_variant ORF1ab_pp1a R2841L 1.00e+0 BA.2.12
V1846 8596G>T missense_variant ORF1ab_pp1a V2866L 1.00e+0 BA.2.12
V1857 8624G>T missense_variant ORF1ab_pp1a R2875L 1.00e+0 BA.2.12
V1883 8846G>T missense_variant ORF1ab_pp1a R2949L 1.00e+0 BA.2.12
V1886 8858G>T missense_variant ORF1ab_pp1a R2953L 1.00e+0 BA.2.12
V1900 8959G>T missense_variant ORF1ab_pp1a G2987C 1.00e+0 BA.2.12
V1961 9491G>T missense_variant ORF1ab_pp1a R3164L 1.00e+0 BA.2.12
V1964 9581G>T missense_variant ORF1ab_pp1a R3194L 1.00e+0 BA.2.12
V1979 9703G>T missense_variant ORF1ab_pp1a A3235S 1.00e+0 BA.2.12
V1993 9874G>T missense_variant ORF1ab_pp1a G3292C 1.00e+0 BA.2.12
V1997 9892G>T missense_variant ORF1ab_pp1a V3298L 7.07e-1 BA.2.12
V2005 9968G>T missense_variant ORF1ab_pp1a R3323L 7.07e-1 BA.2.12
V2030 10103G>T missense_variant ORF1ab_pp1a R3368L 7.07e-1 BA.2.12
V2055 10417G>T missense_variant ORF1ab_pp1a A3473S 1.00e+0 BA.2.12
V2060 10454G>T missense_variant ORF1ab_pp1a R3485L 1.00e+0 BA.2.12
V207 277G>T stop_gained ORF1ab_pp1a E93* 1.00e+0 BA.2.12
V2079 10570G>T missense_variant ORF1ab_pp1a V3524F 1.00e+0 BA.2.12
V2087 10625G>T missense_variant ORF1ab_pp1a R3542L 1.00e+0 BA.2.12
V21 -165G>T upstream_gene_variant ORF1ab_pp1a None 1.00e+0 BA.2.12
V212 292G>T missense_variant ORF1ab_pp1a G98C 1.00e+0 BA.2.12
V215 296G>T missense_variant ORF1ab_pp1a R99L 1.00e+0 BA.2.12
V2151 10985G>T missense_variant ORF1ab_pp1a R3662L 1.00e+0 BA.2.12
V2188 11152G>T missense_variant ORF1ab_pp1a V3718F 8.16e-1 BA.2.12
V2238 11405G>T missense_variant ORF1ab_pp1a R3802L 1.00e+0 BA.2.12
V228 337G>T stop_gained ORF1ab_pp1a E113* 1.00e+0 BA.2.12
V2310 11978G>T missense_variant ORF1ab_pp1a R3993L 1.00e+0 BA.2.12
V2313 11996G>T missense_variant ORF1ab_pp1a R3999L 1.00e+0 BA.2.12
V2358 12449G>T missense_variant ORF1ab_pp1a R4150L 1.00e+0 BA.2.12
V2362 12469G>T missense_variant ORF1ab_pp1a G4157C 1.00e+0 BA.2.12
V2386 12559G>T missense_variant ORF1ab_pp1a D4187Y 1.00e+0 BA.2.12
V239 356G>T missense_variant ORF1ab_pp1a R119L 1.00e+0 BA.2.12
V2406 12752G>T missense_variant ORF1ab_pp1a R4251L 1.00e+0 BA.2.12
V2424 12992G>T missense_variant ORF1ab_pp1a R4331L 1.00e+0 BA.2.12
V243 371G>T missense_variant ORF1ab_pp1a R124L 1.00e+0 BA.2.12
V2438 13114G>T missense_variant ORF1ab_pp1a V4372F 1.00e+0 BA.2.12
V2439 13120G>T missense_variant ORF1ab_pp1a G4374C 1.00e+0 BA.2.12
V2445 13160G>T missense_variant ORF1ab_pp1a R4387L 1.00e+0 BA.2.12
V2446 13162G>T stop_gained ORF1ab_pp1a E4388* 1.00e+0 BA.2.12
V245 379G>T missense_variant ORF1ab_pp1a G127C 1.00e+0 BA.2.12
V2452 13204G>T missense_variant ORF1ab_pp1a G4402W 1.00e+0 BA.2.12
V2453 13213G>T missense_variant ORF1ab_pp1ab G4405C 1.00e+0 BA.2.12
V2456 13229G>T missense_variant ORF1ab_pp1ab R4410L 1.00e+0 BA.2.12
V2459 13243G>T missense_variant ORF1ab_pp1ab G4415C 1.00e+0 BA.2.12
V2463 13267G>T missense_variant ORF1ab_pp1ab V4423L 1.00e+0 BA.2.12
V2470 13340G>T missense_variant ORF1ab_pp1ab R4447L 1.00e+0 BA.2.12
V2474 13357G>T stop_gained ORF1ab_pp1ab E4453* 1.00e+0 BA.2.12
V2496 13498G>T missense_variant ORF1ab_pp1ab G4500C 1.00e+0 BA.2.12
V2500 13523G>T missense_variant ORF1ab_pp1ab R4508L 1.00e+0 BA.2.12
V2503 13529G>T missense_variant ORF1ab_pp1ab R4510L 1.00e+0 BA.2.12
V2507 13558G>T missense_variant ORF1ab_pp1ab V4520F 1.00e+0 BA.2.12
V251 409G>T missense_variant ORF1ab_pp1a G137C 1.00e+0 BA.2.12
V2528 13694G>T missense_variant ORF1ab_pp1ab R4565L 1.00e+0 BA.2.12
V2529 13696G>T missense_variant ORF1ab_pp1ab V4566L 1.00e+0 BA.2.12
V2532 13702G>T missense_variant ORF1ab_pp1ab A4568S 1.00e+0 BA.2.12
V2534 13718G>T missense_variant ORF1ab_pp1ab R4573L 1.00e+0 BA.2.12
V2535 13724G>T missense_variant ORF1ab_pp1ab R4575L 1.00e+0 BA.2.12
V2540 13766G>T missense_variant ORF1ab_pp1ab R4589L 1.00e+0 BA.2.12
V2543 13834G>T missense_variant ORF1ab_pp1ab G4612C 1.00e+0 BA.2.12
V255 412G>T missense_variant ORF1ab_pp1a A138S 1.00e+0 BA.2.12
V257 415G>T missense_variant ORF1ab_pp1a D139Y 1.00e+0 BA.2.12
V2584 14030G>T missense_variant ORF1ab_pp1ab R4677L 1.00e+0 BA.2.12
V2612 14320G>T missense_variant ORF1ab_pp1ab A4774S 1.00e+0 BA.2.12
V2615 14351G>T missense_variant ORF1ab_pp1ab R4784L 1.00e+0 BA.2.12
V2620 14413G>T missense_variant ORF1ab_pp1ab G4805C 1.00e+0 BA.2.12
V2631 14530G>T missense_variant ORF1ab_pp1ab D4844Y 1.00e+0 BA.2.12
V2632 14546G>T missense_variant ORF1ab_pp1ab R4849L 1.00e+0 BA.2.12
V2641 14659G>T missense_variant ORF1ab_pp1ab V4887F 1.00e+0 BA.2.12
V2652 14761G>T missense_variant ORF1ab_pp1ab A4921S 1.00e+0 BA.2.12
V2654 14774G>T missense_variant ORF1ab_pp1ab R4925L 1.00e+0 BA.2.12
V2656 14840G>T missense_variant ORF1ab_pp1ab R4947L 1.00e+0 BA.2.12
V2657 14845G>T missense_variant ORF1ab_pp1ab V4949L 1.00e+0 BA.2.12
V2660 14917G>T missense_variant ORF1ab_pp1ab A4973S 1.00e+0 BA.2.12
V2680 15095G>T missense_variant ORF1ab_pp1ab R5032L 1.00e+0 BA.2.12
V2687 15128G>T missense_variant ORF1ab_pp1ab R5043L 1.00e+0 BA.2.12
V269 439G>T missense_variant ORF1ab_pp1a D147Y 1.00e+0 BA.2.12
V2695 15187G>T missense_variant ORF1ab_pp1ab G5063C 1.00e+0 BA.2.12
V270 442G>T stop_gained ORF1ab_pp1a E148* 1.00e+0 BA.2.12
V2702 15325G>T missense_variant ORF1ab_pp1ab D5109Y 1.00e+0 BA.2.12
V2706 15338G>T missense_variant ORF1ab_pp1ab R5113L 1.00e+0 BA.2.12
V2715 15415G>T missense_variant ORF1ab_pp1ab A5139S 1.00e+0 BA.2.12
V2716 15425G>T missense_variant ORF1ab_pp1ab R5142L 1.00e+0 BA.2.12
V2719 15457G>T missense_variant ORF1ab_pp1ab D5153Y 1.00e+0 BA.2.12
V2743 15697G>T missense_variant ORF1ab_pp1ab G5233C 1.00e+0 BA.2.12
V2745 15718G>T missense_variant ORF1ab_pp1ab V5240L 7.07e-1 BA.2.12
V2746 15749G>T missense_variant ORF1ab_pp1ab R5250L 1.00e+0 BA.2.12
V2747 15754G>T missense_variant ORF1ab_pp1ab V5252L 1.00e+0 BA.2.12
V2772 16034G>T missense_variant ORF1ab_pp1ab R5345L 1.00e+0 BA.2.12
V2796 16273G>T missense_variant ORF1ab_pp1ab D5425Y 1.00e+0 BA.2.12
V2812 16436G>T missense_variant ORF1ab_pp1ab R5479L 1.00e+0 BA.2.12
V2822 16505G>T missense_variant ORF1ab_pp1ab R5502L 1.00e+0 BA.2.12
V2823 16529G>T missense_variant ORF1ab_pp1ab R5510L 1.00e+0 BA.2.12
V2834 16607G>T missense_variant ORF1ab_pp1ab R5536L 1.00e+0 BA.2.12
V285 512G>T missense_variant ORF1ab_pp1a R171L 1.00e+0 BA.2.12
V287 524G>T missense_variant ORF1ab_pp1a R175L 1.00e+0 BA.2.12
V2880 16880G>T missense_variant ORF1ab_pp1ab R5627L 1.00e+0 BA.2.12
V2884 16909G>T missense_variant ORF1ab_pp1ab A5637S 1.00e+0 BA.2.12
V289 535G>T stop_gained ORF1ab_pp1a G179* 1.00e+0 BA.2.12
V2894 16982G>T missense_variant ORF1ab_pp1ab R5661L 1.00e+0 BA.2.12
V2896 16988G>T missense_variant ORF1ab_pp1ab R5663L 1.00e+0 BA.2.12
V29 -142G>T upstream_gene_variant ORF1ab_pp1a None 1.00e+0 BA.2.12
V2919 17173G>T missense_variant ORF1ab_pp1ab D5725Y 1.00e+0 BA.2.12
V2923 17198G>T missense_variant ORF1ab_pp1ab R5733L 1.00e+0 BA.2.12
V2933 17287G>T stop_gained ORF1ab_pp1ab G5763* 1.00e+0 BA.2.12
V2935 17297G>T missense_variant ORF1ab_pp1ab R5766L 1.00e+0 BA.2.12
V2936 17300G>T missense_variant ORF1ab_pp1ab R5767L 1.00e+0 BA.2.12
V2956 17455G>T missense_variant ORF1ab_pp1ab V5819L 1.00e+0 BA.2.12
V296 551G>T missense_variant ORF1ab_pp1a R184L 1.00e+0 BA.2.12
V2960 17477G>T missense_variant ORF1ab_pp1ab R5826L 1.00e+0 BA.2.12
V297 559G>T missense_variant ORF1ab_pp1a D187Y 1.00e+0 BA.2.12
V2992 17753G>T missense_variant ORF1ab_pp1ab R5918L 1.00e+0 BA.2.12
V3016 17899A>T missense_variant ORF1ab_pp1ab I5967L 1.00e+0 BA.2.12
V3039 18002G>T missense_variant ORF1ab_pp1ab R6001L 1.00e+0 BA.2.12
V3040 18004G>T stop_gained ORF1ab_pp1ab E6002* 1.00e+0 BA.2.12
V3045 18026G>T missense_variant ORF1ab_pp1ab R6009L 1.00e+0 BA.2.12
V3048 18043G>T missense_variant ORF1ab_pp1ab D6015Y 1.00e+0 BA.2.12
V3049 18049G>T stop_gained ORF1ab_pp1ab E6017* 1.00e+0 BA.2.12
V3085 18263G>T missense_variant ORF1ab_pp1ab R6088L 1.00e+0 BA.2.12
V3092 18319G>T missense_variant ORF1ab_pp1ab V6107L 1.00e+0 BA.2.12
V3102 18389G>T missense_variant ORF1ab_pp1ab R6130L 1.00e+0 BA.2.12
V3105 18413G>T missense_variant ORF1ab_pp1ab R6138L 1.00e+0 BA.2.12
V311 620G>T missense_variant ORF1ab_pp1a R207L 1.00e+0 BA.2.12
V3115 18481G>T missense_variant ORF1ab_pp1ab V6161F 1.00e+0 BA.2.12
V3130 18625G>T stop_gained ORF1ab_pp1ab E6209* 1.00e+0 BA.2.12
V3135 18641G>T missense_variant ORF1ab_pp1ab R6214L 1.00e+0 BA.2.12
V3187 18943G>T missense_variant ORF1ab_pp1ab D6315Y 1.00e+0 BA.2.12
V321 649G>T stop_gained ORF1ab_pp1a E217* 1.00e+0 BA.2.12
V3216 19202G>T missense_variant ORF1ab_pp1ab R6401L 1.00e+0 BA.2.12
V3220 19261G>T missense_variant ORF1ab_pp1ab D6421Y 8.16e-1 BA.2.12
V3254 19538G>T missense_variant ORF1ab_pp1ab R6513L 1.00e+0 BA.2.12
V3293 19769G>T missense_variant ORF1ab_pp1ab R6590L 1.00e+0 BA.2.12
V3310 19870G>T missense_variant ORF1ab_pp1ab V6624L 1.00e+0 BA.2.12
V332 695G>T missense_variant ORF1ab_pp1a R232L 1.00e+0 BA.2.12
V3331 20027G>T missense_variant ORF1ab_pp1ab R6676L 1.00e+0 BA.2.12
V3334 20053G>T stop_gained ORF1ab_pp1ab E6685* 1.00e+0 BA.2.12
V3338 20062G>T missense_variant ORF1ab_pp1ab V6688F 1.00e+0 BA.2.12
V3345 20126G>T missense_variant ORF1ab_pp1ab R6709L 1.00e+0 BA.2.12
V336 731G>T missense_variant ORF1ab_pp1a R244L 1.00e+0 BA.2.12
V3415 20527G>T missense_variant ORF1ab_pp1ab A6843S 1.00e+0 BA.2.12
V3428 20683G>T missense_variant ORF1ab_pp1ab D6895Y 1.00e+0 BA.2.12
V3444 20791G>T missense_variant ORF1ab_pp1ab D6931Y 1.00e+0 BA.2.12
V3462 20893G>T missense_variant ORF1ab_pp1ab V6965L 1.00e+0 BA.2.12
V3475 20956G>T missense_variant ORF1ab_pp1ab A6986S 1.00e+0 BA.2.12
V3487 21041G>T missense_variant ORF1ab_pp1ab R7014L 1.00e+0 BA.2.12
V3488 21043G>T stop_gained ORF1ab_pp1ab E7015* 1.00e+0 BA.2.12
V3517 -5G>T upstream_gene_variant S None 1.00e+0 BA.2.12
V3562 101G>T missense_variant S R34L 1.00e+0 BA.2.12
V3621 367G>T missense_variant S A123S 8.16e-1 BA.2.12
V370 902G>T missense_variant ORF1ab_pp1a R301L 1.00e+0 BA.2.12
V38 -114G>T upstream_gene_variant ORF1ab_pp1a None 1.00e+0 BA.2.12
V3822 1030G>T missense_variant S A344S 1.00e+0 BA.2.12
V3857 1231G>T missense_variant S A411S 1.00e+0 BA.2.12
V3923 1478A>T missense_variant S Q493L 7.07e-1 BA.2.12
V3959 1730G>T missense_variant S R577L 1.00e+0 BA.2.12
V396 1003G>T missense_variant ORF1ab_pp1a D335Y 1.00e+0 BA.2.12
V3985 1901G>T missense_variant S R634L 1.00e+0 BA.2.12
V3991 1937G>T missense_variant S R646L 1.00e+0 BA.2.12
V4005 2014G>T missense_variant S A672S 1.00e+0 BA.2.12
V401 1024G>T stop_gained ORF1ab_pp1a E342* 1.00e+0 BA.2.12
V4025 2045G>T missense_variant S R682L 1.00e+0 BA.2.12
V4026 2048G>T missense_variant S R683L 8.16e-1 BA.2.12
V4029 2054G>T missense_variant S R685L 1.00e+0 BA.2.12
V4065 2294G>T missense_variant S R765L 1.00e+0 BA.2.12
V41 -101G>T upstream_gene_variant ORF1ab_pp1a None 1.00e+0 BA.2.12
V4109 2569G>T missense_variant S G857C 1.00e+0 BA.2.12
V4150 2948G>T missense_variant S R983L 1.00e+0 BA.2.12
V4185 3272G>T missense_variant S R1091L 1.00e+0 BA.2.12
V4235 3554G>T missense_variant S R1185L 1.00e+0 BA.2.12
V4244 3595G>T missense_variant S D1199Y 1.00e+0 BA.2.12
V4289 3778G>T missense_variant S D1260Y 1.00e+0 BA.2.12
V4302 -6G>T upstream_gene_variant ORF3a None 1.00e+0 BA.2.12
V4345 89G>T missense_variant ORF3a R30L 1.00e+0 BA.2.12
V4347 91G>T missense_variant ORF3a A31S 1.00e+0 BA.2.12
V437 1156G>T stop_gained ORF1ab_pp1a E386* 1.00e+0 BA.2.12
V4379 130G>T stop_gained ORF3a G44* 1.00e+0 BA.2.12
V4391 148G>T missense_variant ORF3a V50F 8.16e-1 BA.2.12
V4410 175G>T missense_variant ORF3a A59S 1.00e+0 BA.2.12
V4459 289G>T missense_variant ORF3a V97F 1.00e+0 BA.2.12
V446 1193G>T missense_variant ORF1ab_pp1a R398L 1.00e+0 BA.2.12
V4512 401G>T missense_variant ORF3a R134L 1.00e+0 BA.2.12
V453 1205G>T missense_variant ORF1ab_pp1a R402L 1.00e+0 BA.2.12
V4614 751G>T missense_variant ORF3a G251C 1.00e+0 BA.2.12
V4620 760G>T stop_gained ORF3a G254* 1.00e+0 BA.2.12
V4652 817G>T missense_variant ORF3a V273L 1.00e+0 BA.2.12
V4672 70G>T missense_variant E V24L 1.00e+0 BA.2.12
V4678 145G>T missense_variant E V49L 1.00e+0 BA.2.12
V4685 172G>T missense_variant E V58F 1.00e+0 BA.2.12
V4686 182G>T missense_variant E R61L 1.00e+0 BA.2.12
V469 1285G>T missense_variant ORF1ab_pp1a A429S 1.00e+0 BA.2.12
V4722 16G>T missense_variant M G6C 8.16e-1 BA.2.12
V4757 232G>T missense_variant M G78C 1.00e+0 BA.2.12
V4763 247G>T missense_variant M A83S 1.00e+0 BA.2.12
V4772 320G>T missense_variant M R107L 1.00e+0 BA.2.12
V4782 473G>T missense_variant M R158L 7.07e-1 BA.2.12
V4784 521G>T missense_variant M R174L 7.07e-1 BA.2.12
V4788 593G>T missense_variant M R198L 7.07e-1 BA.2.12
V48 -92G>T upstream_gene_variant ORF1ab_pp1a None 1.00e+0 BA.2.12
V4800 13G>T missense_variant ORF6 V5F 1.00e+0 BA.2.12
V4812 59G>T missense_variant ORF6 R20M 1.00e+0 BA.2.12
V484 1330G>T stop_gained ORF1ab_pp1a E444* 1.00e+0 BA.2.12
V4844 -4G>T upstream_gene_variant ORF7a None 7.07e-1 BA.2.12
V4864 37G>T missense_variant ORF7a A13S 1.00e+0 BA.2.12
V4895 121G>T stop_gained ORF7a E41* 1.00e+0 BA.2.12
V4930 208G>T missense_variant ORF7a G70C 1.00e+0 BA.2.12
V4932 211G>T missense_variant ORF7a V71L 1.00e+0 BA.2.12
V4937 220G>T missense_variant ORF7a V74F 1.00e+0 BA.2.12
V4943 233G>T missense_variant ORF7a R78L 1.00e+0 BA.2.12
V5056 127G>T missense_variant ORF7b A43S 7.07e-1 BA.2.12
V5061 -4G>T upstream_gene_variant ORF8 None 7.07e-1 BA.2.12
V511 1420G>T missense_variant ORF1ab_pp1a A474S 1.00e+0 BA.2.12
V5144 184G>T missense_variant ORF8 V62L 8.16e-1 BA.2.12
V5173 223G>T missense_variant ORF8 D75Y 1.00e+0 BA.2.12
V5176 229G>T missense_variant ORF8 G77C 1.00e+0 BA.2.12
V5196 302G>T missense_variant ORF8 R101L 8.16e-1 BA.2.12
V5209 340G>T missense_variant ORF8 V114F 1.00e+0 BA.2.12
V5212 344G>T missense_variant ORF8 R115L 1.00e+0 BA.2.12
V5234 -12G>T upstream_gene_variant N None 1.00e+0 BA.2.12
V5266 29G>T missense_variant N R10L 1.00e+0 BA.2.12
V5277 41G>T missense_variant N R14L 1.00e+0 BA.2.12
V5324 107G>T missense_variant N R36L 1.00e+0 BA.2.12
V5331 119G>T missense_variant N R40L 1.00e+0 BA.2.12
V5333 122G>T missense_variant N R41L 1.00e+0 BA.2.12
V5337 163G>T missense_variant N A55S 1.00e+0 BA.2.12
V5345 203G>T missense_variant N R68L 1.00e+0 BA.2.12
V5349 214G>T missense_variant N V72F 1.00e+0 BA.2.12
V5355 263G>T missense_variant N R88L 1.00e+0 BA.2.12
V5359 278G>T missense_variant N R93L 1.00e+0 BA.2.12
V5361 284G>T missense_variant N R95L 1.00e+0 BA.2.12
V5364 295G>T missense_variant N G99C 1.00e+0 BA.2.12
V5379 385G>T missense_variant N G129C 1.00e+0 BA.2.12
V5395 446G>T missense_variant N R149L 1.00e+0 BA.2.12
V5404 472G>T missense_variant N V158L 1.00e+0 BA.2.12
V5414 517G>T missense_variant N A173S 1.00e+0 BA.2.12
V5419 535G>T missense_variant N G179C 1.00e+0 BA.2.12
V5429 554G>T missense_variant N R185L 1.00e+0 BA.2.12
V5434 566G>T missense_variant N R189L 1.00e+0 BA.2.12
V5437 572G>T missense_variant N R191L 8.16e-1 BA.2.12
V5467 611G>T missense_variant N G204V 1.00e+0 BA.2.12
V5496 643G>T missense_variant N G215C 1.00e+0 BA.2.12
V5536 776G>T missense_variant N R259L 1.00e+0 BA.2.12
V5537 785G>T missense_variant N R262L 1.00e+0 BA.2.12
V554 1625G>T missense_variant ORF1ab_pp1a R542L 1.00e+0 BA.2.12
V5546 823G>T missense_variant N G275C 1.00e+0 BA.2.12
V5547 830G>T missense_variant N R277L 1.00e+0 BA.2.12
V556 1634G>T missense_variant ORF1ab_pp1a R545L 1.00e+0 BA.2.12
V5565 931G>T missense_variant N A311S 1.00e+0 BA.2.12
V5566 946G>T stop_gained N G316* 1.00e+0 BA.2.12
V5570 956G>T missense_variant N R319L 1.00e+0 BA.2.12
V5594 1075G>T missense_variant N A359S 1.00e+0 BA.2.12
V563 1649G>T missense_variant ORF1ab_pp1a R550L 1.00e+0 BA.2.12
V5652 1238G>T missense_variant N S413I 7.07e-1 BA.2.12
V5688 16G>T missense_variant ORF10 V6F 1.00e+0 BA.2.12
V5690 22G>T missense_variant ORF10 A8S 1.00e+0 BA.2.12
V5708 71G>T missense_variant ORF10 R24L 7.07e-1 BA.2.12
V574 1679G>T missense_variant ORF1ab_pp1a R560L 1.00e+0 BA.2.12
V581 1696G>T missense_variant ORF1ab_pp1a A566S 1.00e+0 BA.2.12
V5875 222G>T synonymous_variant ORF1ab_pp1a S74S 1.00e+0 BA.2.12
V5970 726G>T synonymous_variant ORF1ab_pp1a T242T 1.00e+0 BA.2.12
V5998 921G>T synonymous_variant ORF1ab_pp1a A307A 1.00e+0 BA.2.12
V6010 999G>T synonymous_variant ORF1ab_pp1a T333T 1.00e+0 BA.2.12
V61 -68G>T upstream_gene_variant ORF1ab_pp1a None 1.00e+0 BA.2.12
V6121 1830G>T synonymous_variant ORF1ab_pp1a S610S 1.00e+0 BA.2.12
V6165 2133G>T synonymous_variant ORF1ab_pp1a T711T 1.00e+0 BA.2.12
V631 1879G>T missense_variant ORF1ab_pp1a V627F 8.16e-1 BA.2.12
V6413 3942G>T synonymous_variant ORF1ab_pp1a A1314A 1.00e+0 BA.2.12
V6420 3990G>T synonymous_variant ORF1ab_pp1a P1330P 1.00e+0 BA.2.12
V643 1933G>T missense_variant ORF1ab_pp1a G645C 1.00e+0 BA.2.12
V6481 4455G>T synonymous_variant ORF1ab_pp1a A1485A 1.00e+0 BA.2.12
V6521 4743G>T synonymous_variant ORF1ab_pp1a T1581T 1.00e+0 BA.2.12
V657 1981G>T missense_variant ORF1ab_pp1a G661C 1.00e+0 BA.2.12
V6610 5364G>T synonymous_variant ORF1ab_pp1a T1788T 8.16e-1 BA.2.12
V6634 5592G>T synonymous_variant ORF1ab_pp1a T1864T 1.00e+0 BA.2.12
V6686 6006G>T synonymous_variant ORF1ab_pp1a T2002T 1.00e+0 BA.2.12
V6695 6072G>T synonymous_variant ORF1ab_pp1a S2024S 8.16e-1 BA.2.12
V6704 6099G>T synonymous_variant ORF1ab_pp1a A2033A 1.00e+0 BA.2.12
V6765 6585G>T synonymous_variant ORF1ab_pp1a P2195P 1.00e+0 BA.2.12
V6830 7128G>T synonymous_variant ORF1ab_pp1a P2376P 1.00e+0 BA.2.12
V6859 7410G>T synonymous_variant ORF1ab_pp1a A2470A 8.16e-1 BA.2.12
V6890 7671G>T synonymous_variant ORF1ab_pp1a A2557A 8.16e-1 BA.2.12
V69 -62G>T upstream_gene_variant ORF1ab_pp1a None 1.00e+0 BA.2.12
V6900 7752G>T synonymous_variant ORF1ab_pp1a A2584A 6.32e-1 BA.2.12
V6908 7791G>T synonymous_variant ORF1ab_pp1a T2597T 1.00e+0 BA.2.12
V6950 8088G>T synonymous_variant ORF1ab_pp1a A2696A 1.00e+0 BA.2.12
V6952 8103G>T synonymous_variant ORF1ab_pp1a A2701A 1.00e+0 BA.2.12
V7125 9537G>T synonymous_variant ORF1ab_pp1a A3179A 1.00e+0 BA.2.12
V7140 9606G>T synonymous_variant ORF1ab_pp1a T3202T 1.00e+0 BA.2.12
V72 -58G>T upstream_gene_variant ORF1ab_pp1a None 1.00e+0 BA.2.12
V747 2359G>T missense_variant ORF1ab_pp1a G787W 1.00e+0 BA.2.12
V7480 12249G>T synonymous_variant ORF1ab_pp1a T4083T 8.16e-1 BA.2.12
V7502 12504G>T synonymous_variant ORF1ab_pp1a A4168A 1.00e+0 BA.2.12
V752 2374G>T stop_gained ORF1ab_pp1a E792* 1.00e+0 BA.2.12
V7559 12936G>T synonymous_variant ORF1ab_pp1a P4312P 1.00e+0 BA.2.12
V7567 12975G>T synonymous_variant ORF1ab_pp1a S4325S 1.00e+0 BA.2.12
V7602 13194G>T synonymous_variant ORF1ab_pp1a S4398S 1.00e+0 BA.2.12
V7604 13239G>T synonymous_variant ORF1ab_pp1ab P4413P 8.16e-1 BA.2.12
V762 2452G>T missense_variant ORF1ab_pp1a G818C 1.00e+0 BA.2.12
V7677 13854G>T synonymous_variant ORF1ab_pp1ab T4618T 1.00e+0 BA.2.12
V7699 14004G>T synonymous_variant ORF1ab_pp1ab T4668T 1.00e+0 BA.2.12
V7751 14358G>T synonymous_variant ORF1ab_pp1ab T4786T 1.00e+0 BA.2.12
V782 2593G>T missense_variant ORF1ab_pp1a G865C 1.00e+0 BA.2.12
V7846 15108G>T synonymous_variant ORF1ab_pp1ab T5036T 7.07e-1 BA.2.12
V7869 15279G>T synonymous_variant ORF1ab_pp1ab T5093T 1.00e+0 BA.2.12
V787 2614G>T missense_variant ORF1ab_pp1a A872S 1.00e+0 BA.2.12
V7951 15957G>T synonymous_variant ORF1ab_pp1ab P5319P 1.00e+0 BA.2.12
V7974 16113G>T synonymous_variant ORF1ab_pp1ab P5371P 1.00e+0 BA.2.12
V8011 16383G>T synonymous_variant ORF1ab_pp1ab T5461T 1.00e+0 BA.2.12
V81 -47G>T upstream_gene_variant ORF1ab_pp1a None 8.16e-1 BA.2.12
V8101 17070G>T synonymous_variant ORF1ab_pp1ab T5690T 8.16e-1 BA.2.12
V8145 17415G>T synonymous_variant ORF1ab_pp1ab T5805T 1.00e+0 BA.2.12
V8252 18198G>T synonymous_variant ORF1ab_pp1ab P6066P 1.00e+0 BA.2.12
V8296 18492G>T synonymous_variant ORF1ab_pp1ab P6164P 8.16e-1 BA.2.12
V8328 18696G>T synonymous_variant ORF1ab_pp1ab A6232A 8.16e-1 BA.2.12
V8388 19191G>T synonymous_variant ORF1ab_pp1ab T6397T 1.00e+0 BA.2.12
V8446 19698G>T synonymous_variant ORF1ab_pp1ab T6566T 1.00e+0 BA.2.12
V8502 20205G>T synonymous_variant ORF1ab_pp1ab A6735A 1.00e+0 BA.2.12
V8519 20406G>T synonymous_variant ORF1ab_pp1ab A6802A 1.00e+0 BA.2.12
V8547 20667G>T synonymous_variant ORF1ab_pp1ab T6889T 1.00e+0 BA.2.12
V8549 20673G>T synonymous_variant ORF1ab_pp1ab T6891T 1.00e+0 BA.2.12
V8592 20991G>T synonymous_variant ORF1ab_pp1ab A6997A 8.16e-1 BA.2.12
V8678 336G>T synonymous_variant S S112S 1.00e+0 BA.2.12
V8698 489G>T synonymous_variant S A163A 1.00e+0 BA.2.12
V8749 906G>T synonymous_variant S T302T 8.16e-1 BA.2.12
V882 2977G>T missense_variant ORF1ab_pp1a G993C 1.00e+0 BA.2.12
V8973 2637G>T synonymous_variant S A879A 1.00e+0 BA.2.12
V9003 2883G>T synonymous_variant S T961T 1.00e+0 BA.2.12
V9151 102G>T synonymous_variant ORF3a T34T 8.16e-1 BA.2.12
V9154 108G>T synonymous_variant ORF3a P36P 1.00e+0 BA.2.12
V9253 801G>T synonymous_variant ORF3a P267P 8.16e-1 BA.2.12
V9254 804G>T synonymous_variant ORF3a T268T 1.00e+0 BA.2.12
V9256 807G>T synonymous_variant ORF3a T269T 8.16e-1 BA.2.12
V9262 18G>T synonymous_variant E S6S 1.00e+0 BA.2.12
V9274 108G>T synonymous_variant E A36A 1.00e+0 BA.2.12
V9330 312G>T synonymous_variant M A104A 1.00e+0 BA.2.12
V9351 396G>T synonymous_variant M P132P 1.00e+0 BA.2.12
V9376 525G>T synonymous_variant M T175T 7.07e-1 BA.2.12
V9381 552G>T synonymous_variant M S184S 7.07e-1 BA.2.12
V9480 315G>T synonymous_variant ORF7a A105A 1.00e+0 BA.2.12
V9523 108G>T synonymous_variant ORF8 P36P 7.07e-1 BA.2.12
V9550 309G>T synonymous_variant ORF8 S103S 1.00e+0 BA.2.12
V9568 48G>T synonymous_variant N T16T 1.00e+0 BA.2.12
V9582 105G>T synonymous_variant N A35A 1.00e+0 BA.2.12
V9596 150G>T synonymous_variant N A50A 8.16e-1 BA.2.12
V9744 906G>T synonymous_variant N P302P 1.00e+0 BA.2.12
V9753 939G>T synonymous_variant N A313A 8.16e-1 BA.2.12
V9758 954G>T synonymous_variant N S318S 7.07e-1 BA.2.12
V9764 981G>T synonymous_variant N S327S 6.32e-1 BA.2.12
V9766 987G>T synonymous_variant N T329T 1.00e+0 BA.2.12
V978 3319G>T stop_gained ORF1ab_pp1a G1107* 1.00e+0 BA.2.12
V9797 1149G>T synonymous_variant N P383P 1.00e+0 BA.2.12
V9824 30G>T synonymous_variant ORF10 P10P 1.00e+0 BA.2.12
V9825 36G>T synonymous_variant ORF10 T12T 7.07e-1 BA.2.12
V988 3355G>T missense_variant ORF1ab_pp1a G1119C 8.16e-1 BA.2.12
V1002 3424G>T stop_gained ORF1ab_pp1a E1142* 1.00e+0 BA.2.37
V1026 3509G>T missense_variant ORF1ab_pp1a R1170L 1.00e+0 BA.2.37
V103 -20G>T upstream_gene_variant ORF1ab_pp1a None 1.00e+0 BA.2.37
V1047 3610G>T missense_variant ORF1ab_pp1a A1204S 1.00e+0 BA.2.37
V11 -194G>T upstream_gene_variant ORF1ab_pp1a None 1.00e+0 BA.2.37
V111 -10G>T upstream_gene_variant ORF1ab_pp1a None 1.00e+0 BA.2.37
V1133 4127G>T missense_variant ORF1ab_pp1a R1376L 1.00e+0 BA.2.37
V1139 4157G>T missense_variant ORF1ab_pp1a R1386L 1.00e+0 BA.2.37
V1146 4211G>T missense_variant ORF1ab_pp1a R1404L 1.00e+0 BA.2.37
V1159 4318G>T missense_variant ORF1ab_pp1a D1440Y 1.00e+0 BA.2.37
V1164 4391G>T missense_variant ORF1ab_pp1a R1464L 1.00e+0 BA.2.37
V118 28G>T stop_gained ORF1ab_pp1a E10* 1.00e+0 BA.2.37
V120 40G>T missense_variant ORF1ab_pp1a V14F 1.00e+0 BA.2.37
V124 71G>T missense_variant ORF1ab_pp1a R24L 1.00e+0 BA.2.37
V125 73G>T missense_variant ORF1ab_pp1a D25Y 1.00e+0 BA.2.37
V1252 4883G>T missense_variant ORF1ab_pp1a R1628L 1.00e+0 BA.2.37
V126 76G>T missense_variant ORF1ab_pp1a V26L 1.00e+0 BA.2.37
V1298 5248G>T missense_variant ORF1ab_pp1a V1750L 1.00e+0 BA.2.37
V130 82G>T missense_variant ORF1ab_pp1a V28L 1.00e+0 BA.2.37
V132 86G>T missense_variant ORF1ab_pp1a R29L 1.00e+0 BA.2.37
V1345 5548G>T missense_variant ORF1ab_pp1a G1850C 1.00e+0 BA.2.37
V1374 5767G>T missense_variant ORF1ab_pp1a A1923S 1.00e+0 BA.2.37
V139 103G>T missense_variant ORF1ab_pp1a V35L 1.00e+0 BA.2.37
V1409 6032G>T missense_variant ORF1ab_pp1a R2011L 1.00e+0 BA.2.37
V1432 6097G>T missense_variant ORF1ab_pp1a A2033S 1.00e+0 BA.2.37
V1439 6124G>T stop_gained ORF1ab_pp1a E2042* 1.00e+0 BA.2.37
V1458 6181G>T missense_variant ORF1ab_pp1a V2061F 1.00e+0 BA.2.37
V146 128G>T missense_variant ORF1ab_pp1a R43L 1.00e+0 BA.2.37
V1464 6208G>T stop_gained ORF1ab_pp1a E2070* 1.00e+0 BA.2.37
V1544 6476G>T missense_variant ORF1ab_pp1a R2159L 1.00e+0 BA.2.37
V1546 6488G>T missense_variant ORF1ab_pp1a R2163L 1.00e+0 BA.2.37
V1565 6619G>T missense_variant ORF1ab_pp1a G2207C 1.00e+0 BA.2.37
V1578 6742G>T missense_variant ORF1ab_pp1a A2248S 1.00e+0 BA.2.37
V162 178G>T missense_variant ORF1ab_pp1a V60F 1.00e+0 BA.2.37
V1644 7207G>T missense_variant ORF1ab_pp1a G2403C 1.00e+0 BA.2.37
V1649 7244G>T missense_variant ORF1ab_pp1a R2415L 1.00e+0 BA.2.37
V1651 7264G>T stop_gained ORF1ab_pp1a E2422* 1.00e+0 BA.2.37
V1662 7471G>T missense_variant ORF1ab_pp1a V2491F 1.00e+0 BA.2.37
V168 218G>T missense_variant ORF1ab_pp1a R73L 1.00e+0 BA.2.37
V1712 7783G>T missense_variant ORF1ab_pp1a V2595F 1.00e+0 BA.2.37
V1716 7810G>T missense_variant ORF1ab_pp1a V2604L 1.00e+0 BA.2.37
V1743 7913G>T missense_variant ORF1ab_pp1a R2638L 1.00e+0 BA.2.37
V175 230G>T missense_variant ORF1ab_pp1a R77L 1.00e+0 BA.2.37
V1753 8002G>T missense_variant ORF1ab_pp1a D2668Y 1.00e+0 BA.2.37
V1760 8057G>T missense_variant ORF1ab_pp1a R2686L 1.00e+0 BA.2.37
V1766 8090G>T missense_variant ORF1ab_pp1a R2697L 1.00e+0 BA.2.37
V1774 8143G>T missense_variant ORF1ab_pp1a V2715F 1.00e+0 BA.2.37
V1777 8177G>T missense_variant ORF1ab_pp1a R2726L 1.00e+0 BA.2.37
V1778 8189G>T missense_variant ORF1ab_pp1a R2730L 1.00e+0 BA.2.37
V1819 8453G>T missense_variant ORF1ab_pp1a R2818L 1.00e+0 BA.2.37
V1829 8522G>T missense_variant ORF1ab_pp1a R2841L 1.00e+0 BA.2.37
V1846 8596G>T missense_variant ORF1ab_pp1a V2866L 1.00e+0 BA.2.37
V1857 8624G>T missense_variant ORF1ab_pp1a R2875L 1.00e+0 BA.2.37
V1883 8846G>T missense_variant ORF1ab_pp1a R2949L 1.00e+0 BA.2.37
V1886 8858G>T missense_variant ORF1ab_pp1a R2953L 1.00e+0 BA.2.37
V1900 8959G>T missense_variant ORF1ab_pp1a G2987C 1.00e+0 BA.2.37
V1961 9491G>T missense_variant ORF1ab_pp1a R3164L 1.00e+0 BA.2.37
V1964 9581G>T missense_variant ORF1ab_pp1a R3194L 1.00e+0 BA.2.37
V1979 9703G>T missense_variant ORF1ab_pp1a A3235S 1.00e+0 BA.2.37
V1993 9874G>T missense_variant ORF1ab_pp1a G3292C 1.00e+0 BA.2.37
V1997 9892G>T missense_variant ORF1ab_pp1a V3298L 1.00e+0 BA.2.37
V2005 9968G>T missense_variant ORF1ab_pp1a R3323L 1.00e+0 BA.2.37
V2030 10103G>T missense_variant ORF1ab_pp1a R3368L 1.00e+0 BA.2.37
V2055 10417G>T missense_variant ORF1ab_pp1a A3473S 1.00e+0 BA.2.37
V2060 10454G>T missense_variant ORF1ab_pp1a R3485L 1.00e+0 BA.2.37
V207 277G>T stop_gained ORF1ab_pp1a E93* 1.00e+0 BA.2.37
V2079 10570G>T missense_variant ORF1ab_pp1a V3524F 1.00e+0 BA.2.37
V2087 10625G>T missense_variant ORF1ab_pp1a R3542L 1.00e+0 BA.2.37
V21 -165G>T upstream_gene_variant ORF1ab_pp1a None 1.00e+0 BA.2.37
V212 292G>T missense_variant ORF1ab_pp1a G98C 1.00e+0 BA.2.37
V215 296G>T missense_variant ORF1ab_pp1a R99L 1.00e+0 BA.2.37
V2151 10985G>T missense_variant ORF1ab_pp1a R3662L 1.00e+0 BA.2.37
V2238 11405G>T missense_variant ORF1ab_pp1a R3802L 1.00e+0 BA.2.37
V228 337G>T stop_gained ORF1ab_pp1a E113* 1.00e+0 BA.2.37
V2310 11978G>T missense_variant ORF1ab_pp1a R3993L 1.00e+0 BA.2.37
V2313 11996G>T missense_variant ORF1ab_pp1a R3999L 1.00e+0 BA.2.37
V2358 12449G>T missense_variant ORF1ab_pp1a R4150L 1.00e+0 BA.2.37
V2362 12469G>T missense_variant ORF1ab_pp1a G4157C 1.00e+0 BA.2.37
V2386 12559G>T missense_variant ORF1ab_pp1a D4187Y 1.00e+0 BA.2.37
V239 356G>T missense_variant ORF1ab_pp1a R119L 1.00e+0 BA.2.37
V2406 12752G>T missense_variant ORF1ab_pp1a R4251L 1.00e+0 BA.2.37
V2424 12992G>T missense_variant ORF1ab_pp1a R4331L 1.00e+0 BA.2.37
V243 371G>T missense_variant ORF1ab_pp1a R124L 1.00e+0 BA.2.37
V2438 13114G>T missense_variant ORF1ab_pp1a V4372F 1.00e+0 BA.2.37
V2439 13120G>T missense_variant ORF1ab_pp1a G4374C 1.00e+0 BA.2.37
V2445 13160G>T missense_variant ORF1ab_pp1a R4387L 1.00e+0 BA.2.37
V2446 13162G>T stop_gained ORF1ab_pp1a E4388* 1.00e+0 BA.2.37
V245 379G>T missense_variant ORF1ab_pp1a G127C 1.00e+0 BA.2.37
V2452 13204G>T missense_variant ORF1ab_pp1a G4402W 1.00e+0 BA.2.37
V2453 13213G>T missense_variant ORF1ab_pp1ab G4405C 1.00e+0 BA.2.37
V2456 13229G>T missense_variant ORF1ab_pp1ab R4410L 1.00e+0 BA.2.37
V2459 13243G>T missense_variant ORF1ab_pp1ab G4415C 1.00e+0 BA.2.37
V2463 13267G>T missense_variant ORF1ab_pp1ab V4423L 1.00e+0 BA.2.37
V2470 13340G>T missense_variant ORF1ab_pp1ab R4447L 1.00e+0 BA.2.37
V2474 13357G>T stop_gained ORF1ab_pp1ab E4453* 1.00e+0 BA.2.37
V2496 13498G>T missense_variant ORF1ab_pp1ab G4500C 1.00e+0 BA.2.37
V2500 13523G>T missense_variant ORF1ab_pp1ab R4508L 1.00e+0 BA.2.37
V2503 13529G>T missense_variant ORF1ab_pp1ab R4510L 1.00e+0 BA.2.37
V2507 13558G>T missense_variant ORF1ab_pp1ab V4520F 1.00e+0 BA.2.37
V251 409G>T missense_variant ORF1ab_pp1a G137C 1.00e+0 BA.2.37
V2528 13694G>T missense_variant ORF1ab_pp1ab R4565L 1.00e+0 BA.2.37
V2529 13696G>T missense_variant ORF1ab_pp1ab V4566L 1.00e+0 BA.2.37
V2532 13702G>T missense_variant ORF1ab_pp1ab A4568S 1.00e+0 BA.2.37
V2534 13718G>T missense_variant ORF1ab_pp1ab R4573L 1.00e+0 BA.2.37
V2535 13724G>T missense_variant ORF1ab_pp1ab R4575L 1.00e+0 BA.2.37
V2540 13766G>T missense_variant ORF1ab_pp1ab R4589L 1.00e+0 BA.2.37
V2543 13834G>T missense_variant ORF1ab_pp1ab G4612C 1.00e+0 BA.2.37
V255 412G>T missense_variant ORF1ab_pp1a A138S 1.00e+0 BA.2.37
V257 415G>T missense_variant ORF1ab_pp1a D139Y 1.00e+0 BA.2.37
V2584 14030G>T missense_variant ORF1ab_pp1ab R4677L 1.00e+0 BA.2.37
V2612 14320G>T missense_variant ORF1ab_pp1ab A4774S 1.00e+0 BA.2.37
V2615 14351G>T missense_variant ORF1ab_pp1ab R4784L 1.00e+0 BA.2.37
V2620 14413G>T missense_variant ORF1ab_pp1ab G4805C 1.00e+0 BA.2.37
V2631 14530G>T missense_variant ORF1ab_pp1ab D4844Y 1.00e+0 BA.2.37
V2632 14546G>T missense_variant ORF1ab_pp1ab R4849L 1.00e+0 BA.2.37
V2641 14659G>T missense_variant ORF1ab_pp1ab V4887F 1.00e+0 BA.2.37
V2652 14761G>T missense_variant ORF1ab_pp1ab A4921S 1.00e+0 BA.2.37
V2654 14774G>T missense_variant ORF1ab_pp1ab R4925L 1.00e+0 BA.2.37
V2656 14840G>T missense_variant ORF1ab_pp1ab R4947L 1.00e+0 BA.2.37
V2657 14845G>T missense_variant ORF1ab_pp1ab V4949L 1.00e+0 BA.2.37
V2660 14917G>T missense_variant ORF1ab_pp1ab A4973S 1.00e+0 BA.2.37
V2680 15095G>T missense_variant ORF1ab_pp1ab R5032L 1.00e+0 BA.2.37
V2687 15128G>T missense_variant ORF1ab_pp1ab R5043L 1.00e+0 BA.2.37
V269 439G>T missense_variant ORF1ab_pp1a D147Y 1.00e+0 BA.2.37
V2695 15187G>T missense_variant ORF1ab_pp1ab G5063C 1.00e+0 BA.2.37
V270 442G>T stop_gained ORF1ab_pp1a E148* 1.00e+0 BA.2.37
V2702 15325G>T missense_variant ORF1ab_pp1ab D5109Y 1.00e+0 BA.2.37
V2706 15338G>T missense_variant ORF1ab_pp1ab R5113L 1.00e+0 BA.2.37
V2715 15415G>T missense_variant ORF1ab_pp1ab A5139S 1.00e+0 BA.2.37
V2716 15425G>T missense_variant ORF1ab_pp1ab R5142L 1.00e+0 BA.2.37
V2719 15457G>T missense_variant ORF1ab_pp1ab D5153Y 1.00e+0 BA.2.37
V2743 15697G>T missense_variant ORF1ab_pp1ab G5233C 1.00e+0 BA.2.37
V2746 15749G>T missense_variant ORF1ab_pp1ab R5250L 1.00e+0 BA.2.37
V2747 15754G>T missense_variant ORF1ab_pp1ab V5252L 1.00e+0 BA.2.37
V2772 16034G>T missense_variant ORF1ab_pp1ab R5345L 1.00e+0 BA.2.37
V2796 16273G>T missense_variant ORF1ab_pp1ab D5425Y 1.00e+0 BA.2.37
V2812 16436G>T missense_variant ORF1ab_pp1ab R5479L 1.00e+0 BA.2.37
V2822 16505G>T missense_variant ORF1ab_pp1ab R5502L 1.00e+0 BA.2.37
V2823 16529G>T missense_variant ORF1ab_pp1ab R5510L 1.00e+0 BA.2.37
V2834 16607G>T missense_variant ORF1ab_pp1ab R5536L 1.00e+0 BA.2.37
V285 512G>T missense_variant ORF1ab_pp1a R171L 1.00e+0 BA.2.37
V287 524G>T missense_variant ORF1ab_pp1a R175L 1.00e+0 BA.2.37
V2880 16880G>T missense_variant ORF1ab_pp1ab R5627L 1.00e+0 BA.2.37
V2884 16909G>T missense_variant ORF1ab_pp1ab A5637S 1.00e+0 BA.2.37
V289 535G>T stop_gained ORF1ab_pp1a G179* 1.00e+0 BA.2.37
V2894 16982G>T missense_variant ORF1ab_pp1ab R5661L 1.00e+0 BA.2.37
V2896 16988G>T missense_variant ORF1ab_pp1ab R5663L 1.00e+0 BA.2.37
V29 -142G>T upstream_gene_variant ORF1ab_pp1a None 1.00e+0 BA.2.37
V2919 17173G>T missense_variant ORF1ab_pp1ab D5725Y 1.00e+0 BA.2.37
V2923 17198G>T missense_variant ORF1ab_pp1ab R5733L 1.00e+0 BA.2.37
V2933 17287G>T stop_gained ORF1ab_pp1ab G5763* 1.00e+0 BA.2.37
V2935 17297G>T missense_variant ORF1ab_pp1ab R5766L 1.00e+0 BA.2.37
V2936 17300G>T missense_variant ORF1ab_pp1ab R5767L 1.00e+0 BA.2.37
V2956 17455G>T missense_variant ORF1ab_pp1ab V5819L 1.00e+0 BA.2.37
V296 551G>T missense_variant ORF1ab_pp1a R184L 1.00e+0 BA.2.37
V2960 17477G>T missense_variant ORF1ab_pp1ab R5826L 1.00e+0 BA.2.37
V297 559G>T missense_variant ORF1ab_pp1a D187Y 1.00e+0 BA.2.37
V2992 17753G>T missense_variant ORF1ab_pp1ab R5918L 1.00e+0 BA.2.37
V3016 17899A>T missense_variant ORF1ab_pp1ab I5967L 1.00e+0 BA.2.37
V3039 18002G>T missense_variant ORF1ab_pp1ab R6001L 1.00e+0 BA.2.37
V3040 18004G>T stop_gained ORF1ab_pp1ab E6002* 1.00e+0 BA.2.37
V3045 18026G>T missense_variant ORF1ab_pp1ab R6009L 1.00e+0 BA.2.37
V3048 18043G>T missense_variant ORF1ab_pp1ab D6015Y 1.00e+0 BA.2.37
V3049 18049G>T stop_gained ORF1ab_pp1ab E6017* 1.00e+0 BA.2.37
V3085 18263G>T missense_variant ORF1ab_pp1ab R6088L 1.00e+0 BA.2.37
V3092 18319G>T missense_variant ORF1ab_pp1ab V6107L 7.07e-1 BA.2.37
V3102 18389G>T missense_variant ORF1ab_pp1ab R6130L 1.00e+0 BA.2.37
V3105 18413G>T missense_variant ORF1ab_pp1ab R6138L 1.00e+0 BA.2.37
V311 620G>T missense_variant ORF1ab_pp1a R207L 1.00e+0 BA.2.37
V3115 18481G>T missense_variant ORF1ab_pp1ab V6161F 1.00e+0 BA.2.37
V3130 18625G>T stop_gained ORF1ab_pp1ab E6209* 1.00e+0 BA.2.37
V3135 18641G>T missense_variant ORF1ab_pp1ab R6214L 1.00e+0 BA.2.37
V3187 18943G>T missense_variant ORF1ab_pp1ab D6315Y 1.00e+0 BA.2.37
V321 649G>T stop_gained ORF1ab_pp1a E217* 1.00e+0 BA.2.37
V3216 19202G>T missense_variant ORF1ab_pp1ab R6401L 1.00e+0 BA.2.37
V3254 19538G>T missense_variant ORF1ab_pp1ab R6513L 1.00e+0 BA.2.37
V3293 19769G>T missense_variant ORF1ab_pp1ab R6590L 1.00e+0 BA.2.37
V3310 19870G>T missense_variant ORF1ab_pp1ab V6624L 1.00e+0 BA.2.37
V332 695G>T missense_variant ORF1ab_pp1a R232L 1.00e+0 BA.2.37
V3331 20027G>T missense_variant ORF1ab_pp1ab R6676L 1.00e+0 BA.2.37
V3334 20053G>T stop_gained ORF1ab_pp1ab E6685* 1.00e+0 BA.2.37
V3338 20062G>T missense_variant ORF1ab_pp1ab V6688F 1.00e+0 BA.2.37
V3345 20126G>T missense_variant ORF1ab_pp1ab R6709L 1.00e+0 BA.2.37
V336 731G>T missense_variant ORF1ab_pp1a R244L 1.00e+0 BA.2.37
V3415 20527G>T missense_variant ORF1ab_pp1ab A6843S 1.00e+0 BA.2.37
V3428 20683G>T missense_variant ORF1ab_pp1ab D6895Y 1.00e+0 BA.2.37
V3444 20791G>T missense_variant ORF1ab_pp1ab D6931Y 1.00e+0 BA.2.37
V3462 20893G>T missense_variant ORF1ab_pp1ab V6965L 1.00e+0 BA.2.37
V3475 20956G>T missense_variant ORF1ab_pp1ab A6986S 1.00e+0 BA.2.37
V3487 21041G>T missense_variant ORF1ab_pp1ab R7014L 1.00e+0 BA.2.37
V3488 21043G>T stop_gained ORF1ab_pp1ab E7015* 1.00e+0 BA.2.37
V3517 -5G>T upstream_gene_variant S None 1.00e+0 BA.2.37
V3562 101G>T missense_variant S R34L 1.00e+0 BA.2.37
V3621 367G>T missense_variant S A123S 1.00e+0 BA.2.37
V370 902G>T missense_variant ORF1ab_pp1a R301L 1.00e+0 BA.2.37
V3737 641G>T missense_variant S R214L 1.00e+0 BA.2.37
V38 -114G>T upstream_gene_variant ORF1ab_pp1a None 1.00e+0 BA.2.37
V3822 1030G>T missense_variant S A344S 1.00e+0 BA.2.37
V3857 1231G>T missense_variant S A411S 1.00e+0 BA.2.37
V3923 1478A>T missense_variant S Q493L 1.00e+0 BA.2.37
V396 1003G>T missense_variant ORF1ab_pp1a D335Y 1.00e+0 BA.2.37
V3985 1901G>T missense_variant S R634L 7.07e-1 BA.2.37
V3991 1937G>T missense_variant S R646L 1.00e+0 BA.2.37
V4005 2014G>T missense_variant S A672S 1.00e+0 BA.2.37
V401 1024G>T stop_gained ORF1ab_pp1a E342* 1.00e+0 BA.2.37
V4025 2045G>T missense_variant S R682L 1.00e+0 BA.2.37
V4026 2048G>T missense_variant S R683L 1.00e+0 BA.2.37
V4029 2054G>T missense_variant S R685L 1.00e+0 BA.2.37
V4065 2294G>T missense_variant S R765L 1.00e+0 BA.2.37
V4109 2569G>T missense_variant S G857C 1.00e+0 BA.2.37
V4150 2948G>T missense_variant S R983L 1.00e+0 BA.2.37
V4185 3272G>T missense_variant S R1091L 1.00e+0 BA.2.37
V4235 3554G>T missense_variant S R1185L 1.00e+0 BA.2.37
V4289 3778G>T missense_variant S D1260Y 1.00e+0 BA.2.37
V4302 -6G>T upstream_gene_variant ORF3a None 1.00e+0 BA.2.37
V4345 89G>T missense_variant ORF3a R30L 1.00e+0 BA.2.37
V4347 91G>T missense_variant ORF3a A31S 1.00e+0 BA.2.37
V437 1156G>T stop_gained ORF1ab_pp1a E386* 1.00e+0 BA.2.37
V4379 130G>T stop_gained ORF3a G44* 1.00e+0 BA.2.37
V4391 148G>T missense_variant ORF3a V50F 1.00e+0 BA.2.37
V4410 175G>T missense_variant ORF3a A59S 1.00e+0 BA.2.37
V4459 289G>T missense_variant ORF3a V97F 7.07e-1 BA.2.37
V446 1193G>T missense_variant ORF1ab_pp1a R398L 1.00e+0 BA.2.37
V4512 401G>T missense_variant ORF3a R134L 1.00e+0 BA.2.37
V4524 463G>T missense_variant ORF3a D155Y 7.07e-1 BA.2.37
V453 1205G>T missense_variant ORF1ab_pp1a R402L 1.00e+0 BA.2.37
V4614 751G>T missense_variant ORF3a G251C 1.00e+0 BA.2.37
V4620 760G>T stop_gained ORF3a G254* 7.07e-1 BA.2.37
V464 1277G>T missense_variant ORF1ab_pp1a R426L 1.00e+0 BA.2.37
V4652 817G>T missense_variant ORF3a V273L 1.00e+0 BA.2.37
V4678 145G>T missense_variant E V49L 1.00e+0 BA.2.37
V4685 172G>T missense_variant E V58F 7.07e-1 BA.2.37
V4686 182G>T missense_variant E R61L 1.00e+0 BA.2.37
V469 1285G>T missense_variant ORF1ab_pp1a A429S 1.00e+0 BA.2.37
V4722 16G>T missense_variant M G6C 1.00e+0 BA.2.37
V4763 247G>T missense_variant M A83S 1.00e+0 BA.2.37
V4772 320G>T missense_variant M R107L 1.00e+0 BA.2.37
V4782 473G>T missense_variant M R158L 1.00e+0 BA.2.37
V4784 521G>T missense_variant M R174L 1.00e+0 BA.2.37
V4788 593G>T missense_variant M R198L 1.00e+0 BA.2.37
V48 -92G>T upstream_gene_variant ORF1ab_pp1a None 1.00e+0 BA.2.37
V4800 13G>T missense_variant ORF6 V5F 1.00e+0 BA.2.37
V4812 59G>T missense_variant ORF6 R20M 1.00e+0 BA.2.37
V484 1330G>T stop_gained ORF1ab_pp1a E444* 1.00e+0 BA.2.37
V4844 -4G>T upstream_gene_variant ORF7a None 1.00e+0 BA.2.37
V4860 32C>T missense_variant ORF7a T11I 7.07e-1 BA.2.37
V4864 37G>T missense_variant ORF7a A13S 1.00e+0 BA.2.37
V4895 121G>T stop_gained ORF7a E41* 7.07e-1 BA.2.37
V4930 208G>T missense_variant ORF7a G70C 1.00e+0 BA.2.37
V4932 211G>T missense_variant ORF7a V71L 1.00e+0 BA.2.37
V4937 220G>T missense_variant ORF7a V74F 1.00e+0 BA.2.37
V4943 233G>T missense_variant ORF7a R78L 1.00e+0 BA.2.37
V511 1420G>T missense_variant ORF1ab_pp1a A474S 1.00e+0 BA.2.37
V5173 223G>T missense_variant ORF8 D75Y 1.00e+0 BA.2.37
V5176 229G>T missense_variant ORF8 G77C 1.00e+0 BA.2.37
V5196 302G>T missense_variant ORF8 R101L 1.00e+0 BA.2.37
V5209 340G>T missense_variant ORF8 V114F 1.00e+0 BA.2.37
V5212 344G>T missense_variant ORF8 R115L 1.00e+0 BA.2.37
V5234 -12G>T upstream_gene_variant N None 1.00e+0 BA.2.37
V5266 29G>T missense_variant N R10L 1.00e+0 BA.2.37
V5277 41G>T missense_variant N R14L 1.00e+0 BA.2.37
V5324 107G>T missense_variant N R36L 1.00e+0 BA.2.37
V5331 119G>T missense_variant N R40L 1.00e+0 BA.2.37
V5333 122G>T missense_variant N R41L 1.00e+0 BA.2.37
V5337 163G>T missense_variant N A55S 1.00e+0 BA.2.37
V5345 203G>T missense_variant N R68L 1.00e+0 BA.2.37
V5349 214G>T missense_variant N V72F 1.00e+0 BA.2.37
V5355 263G>T missense_variant N R88L 1.00e+0 BA.2.37
V5359 278G>T missense_variant N R93L 1.00e+0 BA.2.37
V5361 284G>T missense_variant N R95L 1.00e+0 BA.2.37
V5364 295G>T missense_variant N G99C 1.00e+0 BA.2.37
V5379 385G>T missense_variant N G129C 1.00e+0 BA.2.37
V5395 446G>T missense_variant N R149L 1.00e+0 BA.2.37
V5404 472G>T missense_variant N V158L 1.00e+0 BA.2.37
V5414 517G>T missense_variant N A173S 1.00e+0 BA.2.37
V5419 535G>T missense_variant N G179C 1.00e+0 BA.2.37
V5429 554G>T missense_variant N R185L 1.00e+0 BA.2.37
V5434 566G>T missense_variant N R189L 1.00e+0 BA.2.37
V5437 572G>T missense_variant N R191L 1.00e+0 BA.2.37
V5467 611G>T missense_variant N G204V 1.00e+0 BA.2.37
V5496 643G>T missense_variant N G215C 1.00e+0 BA.2.37
V5536 776G>T missense_variant N R259L 1.00e+0 BA.2.37
V5537 785G>T missense_variant N R262L 1.00e+0 BA.2.37
V554 1625G>T missense_variant ORF1ab_pp1a R542L 1.00e+0 BA.2.37
V5546 823G>T missense_variant N G275C 1.00e+0 BA.2.37
V5547 830G>T missense_variant N R277L 1.00e+0 BA.2.37
V556 1634G>T missense_variant ORF1ab_pp1a R545L 1.00e+0 BA.2.37
V5565 931G>T missense_variant N A311S 1.00e+0 BA.2.37
V5566 946G>T stop_gained N G316* 1.00e+0 BA.2.37
V5570 956G>T missense_variant N R319L 1.00e+0 BA.2.37
V5594 1075G>T missense_variant N A359S 1.00e+0 BA.2.37
V563 1649G>T missense_variant ORF1ab_pp1a R550L 1.00e+0 BA.2.37
V5652 1238G>T missense_variant N S413I 7.07e-1 BA.2.37
V5688 16G>T missense_variant ORF10 V6F 1.00e+0 BA.2.37
V5690 22G>T missense_variant ORF10 A8S 1.00e+0 BA.2.37
V5708 71G>T missense_variant ORF10 R24L 1.00e+0 BA.2.37
V574 1679G>T missense_variant ORF1ab_pp1a R560L 1.00e+0 BA.2.37
V581 1696G>T missense_variant ORF1ab_pp1a A566S 1.00e+0 BA.2.37
V5875 222G>T synonymous_variant ORF1ab_pp1a S74S 1.00e+0 BA.2.37
V5970 726G>T synonymous_variant ORF1ab_pp1a T242T 1.00e+0 BA.2.37
V5998 921G>T synonymous_variant ORF1ab_pp1a A307A 1.00e+0 BA.2.37
V6010 999G>T synonymous_variant ORF1ab_pp1a T333T 7.07e-1 BA.2.37
V61 -68G>T upstream_gene_variant ORF1ab_pp1a None 1.00e+0 BA.2.37
V6121 1830G>T synonymous_variant ORF1ab_pp1a S610S 1.00e+0 BA.2.37
V6165 2133G>T synonymous_variant ORF1ab_pp1a T711T 1.00e+0 BA.2.37
V631 1879G>T missense_variant ORF1ab_pp1a V627F 7.07e-1 BA.2.37
V6413 3942G>T synonymous_variant ORF1ab_pp1a A1314A 1.00e+0 BA.2.37
V6420 3990G>T synonymous_variant ORF1ab_pp1a P1330P 1.00e+0 BA.2.37
V643 1933G>T missense_variant ORF1ab_pp1a G645C 1.00e+0 BA.2.37
V6481 4455G>T synonymous_variant ORF1ab_pp1a A1485A 1.00e+0 BA.2.37
V6521 4743G>T synonymous_variant ORF1ab_pp1a T1581T 1.00e+0 BA.2.37
V657 1981G>T missense_variant ORF1ab_pp1a G661C 1.00e+0 BA.2.37
V6610 5364G>T synonymous_variant ORF1ab_pp1a T1788T 1.00e+0 BA.2.37
V6634 5592G>T synonymous_variant ORF1ab_pp1a T1864T 1.00e+0 BA.2.37
V6686 6006G>T synonymous_variant ORF1ab_pp1a T2002T 1.00e+0 BA.2.37
V6695 6072G>T synonymous_variant ORF1ab_pp1a S2024S 1.00e+0 BA.2.37
V6704 6099G>T synonymous_variant ORF1ab_pp1a A2033A 1.00e+0 BA.2.37
V6765 6585G>T synonymous_variant ORF1ab_pp1a P2195P 1.00e+0 BA.2.37
V6830 7128G>T synonymous_variant ORF1ab_pp1a P2376P 1.00e+0 BA.2.37
V6859 7410G>T synonymous_variant ORF1ab_pp1a A2470A 1.00e+0 BA.2.37
V6890 7671G>T synonymous_variant ORF1ab_pp1a A2557A 1.00e+0 BA.2.37
V69 -62G>T upstream_gene_variant ORF1ab_pp1a None 1.00e+0 BA.2.37
V6900 7752G>T synonymous_variant ORF1ab_pp1a A2584A 1.00e+0 BA.2.37
V6908 7791G>T synonymous_variant ORF1ab_pp1a T2597T 1.00e+0 BA.2.37
V6950 8088G>T synonymous_variant ORF1ab_pp1a A2696A 1.00e+0 BA.2.37
V7125 9537G>T synonymous_variant ORF1ab_pp1a A3179A 1.00e+0 BA.2.37
V72 -58G>T upstream_gene_variant ORF1ab_pp1a None 1.00e+0 BA.2.37
V7246 10377G>T synonymous_variant ORF1ab_pp1a T3459T 1.00e+0 BA.2.37
V747 2359G>T missense_variant ORF1ab_pp1a G787W 1.00e+0 BA.2.37
V7480 12249G>T synonymous_variant ORF1ab_pp1a T4083T 1.00e+0 BA.2.37
V7502 12504G>T synonymous_variant ORF1ab_pp1a A4168A 1.00e+0 BA.2.37
V752 2374G>T stop_gained ORF1ab_pp1a E792* 1.00e+0 BA.2.37
V7559 12936G>T synonymous_variant ORF1ab_pp1a P4312P 7.07e-1 BA.2.37
V7567 12975G>T synonymous_variant ORF1ab_pp1a S4325S 1.00e+0 BA.2.37
V7602 13194G>T synonymous_variant ORF1ab_pp1a S4398S 1.00e+0 BA.2.37
V7604 13239G>T synonymous_variant ORF1ab_pp1ab P4413P 1.00e+0 BA.2.37
V762 2452G>T missense_variant ORF1ab_pp1a G818C 1.00e+0 BA.2.37
V7677 13854G>T synonymous_variant ORF1ab_pp1ab T4618T 7.07e-1 BA.2.37
V7699 14004G>T synonymous_variant ORF1ab_pp1ab T4668T 1.00e+0 BA.2.37
V7751 14358G>T synonymous_variant ORF1ab_pp1ab T4786T 1.00e+0 BA.2.37
V782 2593G>T missense_variant ORF1ab_pp1a G865C 1.00e+0 BA.2.37
V7846 15108G>T synonymous_variant ORF1ab_pp1ab T5036T 1.00e+0 BA.2.37
V7869 15279G>T synonymous_variant ORF1ab_pp1ab T5093T 1.00e+0 BA.2.37
V787 2614G>T missense_variant ORF1ab_pp1a A872S 1.00e+0 BA.2.37
V7951 15957G>T synonymous_variant ORF1ab_pp1ab P5319P 1.00e+0 BA.2.37
V7974 16113G>T synonymous_variant ORF1ab_pp1ab P5371P 1.00e+0 BA.2.37
V8011 16383G>T synonymous_variant ORF1ab_pp1ab T5461T 7.07e-1 BA.2.37
V81 -47G>T upstream_gene_variant ORF1ab_pp1a None 1.00e+0 BA.2.37
V8101 17070G>T synonymous_variant ORF1ab_pp1ab T5690T 7.07e-1 BA.2.37
V8145 17415G>T synonymous_variant ORF1ab_pp1ab T5805T 1.00e+0 BA.2.37
V8252 18198G>T synonymous_variant ORF1ab_pp1ab P6066P 1.00e+0 BA.2.37
V8296 18492G>T synonymous_variant ORF1ab_pp1ab P6164P 1.00e+0 BA.2.37
V8328 18696G>T synonymous_variant ORF1ab_pp1ab A6232A 1.00e+0 BA.2.37
V8388 19191G>T synonymous_variant ORF1ab_pp1ab T6397T 1.00e+0 BA.2.37
V8446 19698G>T synonymous_variant ORF1ab_pp1ab T6566T 1.00e+0 BA.2.37
V8502 20205G>T synonymous_variant ORF1ab_pp1ab A6735A 1.00e+0 BA.2.37
V8519 20406G>T synonymous_variant ORF1ab_pp1ab A6802A 1.00e+0 BA.2.37
V8521 20415G>T synonymous_variant ORF1ab_pp1ab P6805P 1.00e+0 BA.2.37
V8547 20667G>T synonymous_variant ORF1ab_pp1ab T6889T 1.00e+0 BA.2.37
V8549 20673G>T synonymous_variant ORF1ab_pp1ab T6891T 1.00e+0 BA.2.37
V8592 20991G>T synonymous_variant ORF1ab_pp1ab A6997A 1.00e+0 BA.2.37
V8678 336G>T synonymous_variant S S112S 1.00e+0 BA.2.37
V8698 489G>T synonymous_variant S A163A 7.07e-1 BA.2.37
V8711 624G>T synonymous_variant S T208T 1.00e+0 BA.2.37
V8721 663G>T synonymous_variant S S221S 1.00e+0 BA.2.37
V8749 906G>T synonymous_variant S T302T 7.07e-1 BA.2.37
V8811 1425C>T synonymous_variant S A475A 7.07e-1 BA.2.37
V882 2977G>T missense_variant ORF1ab_pp1a G993C 1.00e+0 BA.2.37
V8973 2637G>T synonymous_variant S A879A 1.00e+0 BA.2.37
V9003 2883G>T synonymous_variant S T961T 1.00e+0 BA.2.37
V9151 102G>T synonymous_variant ORF3a T34T 1.00e+0 BA.2.37
V9154 108G>T synonymous_variant ORF3a P36P 1.00e+0 BA.2.37
V9253 801G>T synonymous_variant ORF3a P267P 1.00e+0 BA.2.37
V9254 804G>T synonymous_variant ORF3a T268T 1.00e+0 BA.2.37
V9262 18G>T synonymous_variant E S6S 1.00e+0 BA.2.37
V9274 108G>T synonymous_variant E A36A 1.00e+0 BA.2.37
V9330 312G>T synonymous_variant M A104A 1.00e+0 BA.2.37
V9332 318G>T synonymous_variant M T106T 1.00e+0 BA.2.37
V9351 396G>T synonymous_variant M P132P 1.00e+0 BA.2.37
V9376 525G>T synonymous_variant M T175T 1.00e+0 BA.2.37
V9480 315G>T synonymous_variant ORF7a A105A 1.00e+0 BA.2.37
V9550 309G>T synonymous_variant ORF8 S103S 1.00e+0 BA.2.37
V9568 48G>T synonymous_variant N T16T 1.00e+0 BA.2.37
V9582 105G>T synonymous_variant N A35A 1.00e+0 BA.2.37
V9596 150G>T synonymous_variant N A50A 1.00e+0 BA.2.37
V9753 939G>T synonymous_variant N A313A 1.00e+0 BA.2.37
V9758 954G>T synonymous_variant N S318S 1.00e+0 BA.2.37
V9766 987G>T synonymous_variant N T329T 7.07e-1 BA.2.37
V978 3319G>T stop_gained ORF1ab_pp1a G1107* 1.00e+0 BA.2.37
V9797 1149G>T synonymous_variant N P383P 1.00e+0 BA.2.37
V9824 30G>T synonymous_variant ORF10 P10P 1.00e+0 BA.2.37
V9825 36G>T synonymous_variant ORF10 T12T 1.00e+0 BA.2.37
V988 3355G>T missense_variant ORF1ab_pp1a G1119C 1.00e+0 BA.2.37
V1002 3424G>T stop_gained ORF1ab_pp1a E1142* 1.00e+0 BA.2.65
V1026 3509G>T missense_variant ORF1ab_pp1a R1170L 1.00e+0 BA.2.65
V103 -20G>T upstream_gene_variant ORF1ab_pp1a None 1.00e+0 BA.2.65
V1047 3610G>T missense_variant ORF1ab_pp1a A1204S 1.00e+0 BA.2.65
V11 -194G>T upstream_gene_variant ORF1ab_pp1a None 8.53e-1 BA.2.65
V111 -10G>T upstream_gene_variant ORF1ab_pp1a None 1.00e+0 BA.2.65
V1133 4127G>T missense_variant ORF1ab_pp1a R1376L 9.53e-1 BA.2.65
V1139 4157G>T missense_variant ORF1ab_pp1a R1386L 9.53e-1 BA.2.65
V1146 4211G>T missense_variant ORF1ab_pp1a R1404L 9.04e-1 BA.2.65
V1159 4318G>T missense_variant ORF1ab_pp1a D1440Y 9.04e-1 BA.2.65
V1164 4391G>T missense_variant ORF1ab_pp1a R1464L 9.53e-1 BA.2.65
V118 28G>T stop_gained ORF1ab_pp1a E10* 1.00e+0 BA.2.65
V120 40G>T missense_variant ORF1ab_pp1a V14F 1.00e+0 BA.2.65
V124 71G>T missense_variant ORF1ab_pp1a R24L 9.09e-1 BA.2.65
V125 73G>T missense_variant ORF1ab_pp1a D25Y 9.53e-1 BA.2.65
V1252 4883G>T missense_variant ORF1ab_pp1a R1628L 1.00e+0 BA.2.65
V126 76G>T missense_variant ORF1ab_pp1a V26L 9.53e-1 BA.2.65
V1298 5248G>T missense_variant ORF1ab_pp1a V1750L 1.00e+0 BA.2.65
V130 82G>T missense_variant ORF1ab_pp1a V28L 9.53e-1 BA.2.65
V132 86G>T missense_variant ORF1ab_pp1a R29L 9.53e-1 BA.2.65
V1345 5548G>T missense_variant ORF1ab_pp1a G1850C 1.00e+0 BA.2.65
V1374 5767G>T missense_variant ORF1ab_pp1a A1923S 1.00e+0 BA.2.65
V139 103G>T missense_variant ORF1ab_pp1a V35L 1.00e+0 BA.2.65
V1409 6032G>T missense_variant ORF1ab_pp1a R2011L 1.00e+0 BA.2.65
V1432 6097G>T missense_variant ORF1ab_pp1a A2033S 1.00e+0 BA.2.65
V1439 6124G>T stop_gained ORF1ab_pp1a E2042* 1.00e+0 BA.2.65
V1458 6181G>T missense_variant ORF1ab_pp1a V2061F 9.20e-1 BA.2.65
V146 128G>T missense_variant ORF1ab_pp1a R43L 1.00e+0 BA.2.65
V1464 6208G>T stop_gained ORF1ab_pp1a E2070* 1.00e+0 BA.2.65
V1544 6476G>T missense_variant ORF1ab_pp1a R2159L 1.00e+0 BA.2.65
V1546 6488G>T missense_variant ORF1ab_pp1a R2163L 1.00e+0 BA.2.65
V1565 6619G>T missense_variant ORF1ab_pp1a G2207C 1.00e+0 BA.2.65
V1578 6742G>T missense_variant ORF1ab_pp1a A2248S 1.00e+0 BA.2.65
V162 178G>T missense_variant ORF1ab_pp1a V60F 1.00e+0 BA.2.65
V1644 7207G>T missense_variant ORF1ab_pp1a G2403C 1.00e+0 BA.2.65
V1649 7244G>T missense_variant ORF1ab_pp1a R2415L 1.00e+0 BA.2.65
V1651 7264G>T stop_gained ORF1ab_pp1a E2422* 1.00e+0 BA.2.65
V1662 7471G>T missense_variant ORF1ab_pp1a V2491F 9.53e-1 BA.2.65
V168 218G>T missense_variant ORF1ab_pp1a R73L 1.00e+0 BA.2.65
V1712 7783G>T missense_variant ORF1ab_pp1a V2595F 1.00e+0 BA.2.65
V1716 7810G>T missense_variant ORF1ab_pp1a V2604L 1.00e+0 BA.2.65
V1743 7913G>T missense_variant ORF1ab_pp1a R2638L 1.00e+0 BA.2.65
V175 230G>T missense_variant ORF1ab_pp1a R77L 1.00e+0 BA.2.65
V1753 8002G>T missense_variant ORF1ab_pp1a D2668Y 1.00e+0 BA.2.65
V1760 8057G>T missense_variant ORF1ab_pp1a R2686L 1.00e+0 BA.2.65
V1766 8090G>T missense_variant ORF1ab_pp1a R2697L 1.00e+0 BA.2.65
V1774 8143G>T missense_variant ORF1ab_pp1a V2715F 1.00e+0 BA.2.65
V1777 8177G>T missense_variant ORF1ab_pp1a R2726L 1.00e+0 BA.2.65
V1778 8189G>T missense_variant ORF1ab_pp1a R2730L 1.00e+0 BA.2.65
V1819 8453G>T missense_variant ORF1ab_pp1a R2818L 1.00e+0 BA.2.65
V1829 8522G>T missense_variant ORF1ab_pp1a R2841L 1.00e+0 BA.2.65
V1846 8596G>T missense_variant ORF1ab_pp1a V2866L 1.00e+0 BA.2.65
V1857 8624G>T missense_variant ORF1ab_pp1a R2875L 1.00e+0 BA.2.65
V1883 8846G>T missense_variant ORF1ab_pp1a R2949L 1.00e+0 BA.2.65
V1886 8858G>T missense_variant ORF1ab_pp1a R2953L 1.00e+0 BA.2.65
V1900 8959G>T missense_variant ORF1ab_pp1a G2987C 1.00e+0 BA.2.65
V1961 9491G>T missense_variant ORF1ab_pp1a R3164L 1.00e+0 BA.2.65
V1964 9581G>T missense_variant ORF1ab_pp1a R3194L 1.00e+0 BA.2.65
V1979 9703G>T missense_variant ORF1ab_pp1a A3235S 1.00e+0 BA.2.65
V1993 9874G>T missense_variant ORF1ab_pp1a G3292C 9.53e-1 BA.2.65
V1997 9892G>T missense_variant ORF1ab_pp1a V3298L 9.53e-1 BA.2.65
V2030 10103G>T missense_variant ORF1ab_pp1a R3368L 9.04e-1 BA.2.65
V2055 10417G>T missense_variant ORF1ab_pp1a A3473S 1.00e+0 BA.2.65
V2060 10454G>T missense_variant ORF1ab_pp1a R3485L 1.00e+0 BA.2.65
V207 277G>T stop_gained ORF1ab_pp1a E93* 1.00e+0 BA.2.65
V2079 10570G>T missense_variant ORF1ab_pp1a V3524F 1.00e+0 BA.2.65
V2087 10625G>T missense_variant ORF1ab_pp1a R3542L 1.00e+0 BA.2.65
V21 -165G>T upstream_gene_variant ORF1ab_pp1a None 9.53e-1 BA.2.65
V212 292G>T missense_variant ORF1ab_pp1a G98C 1.00e+0 BA.2.65
V215 296G>T missense_variant ORF1ab_pp1a R99L 1.00e+0 BA.2.65
V2151 10985G>T missense_variant ORF1ab_pp1a R3662L 1.00e+0 BA.2.65
V2161 11023_11026delTCTG frameshift_variant ORF1ab_pp1a S3675fs 8.53e-1 BA.2.65
V2188 11152G>T missense_variant ORF1ab_pp1a V3718F 9.57e-1 BA.2.65
V2238 11405G>T missense_variant ORF1ab_pp1a R3802L 1.00e+0 BA.2.65
V228 337G>T stop_gained ORF1ab_pp1a E113* 1.00e+0 BA.2.65
V2310 11978G>T missense_variant ORF1ab_pp1a R3993L 1.00e+0 BA.2.65
V2313 11996G>T missense_variant ORF1ab_pp1a R3999L 1.00e+0 BA.2.65
V2358 12449G>T missense_variant ORF1ab_pp1a R4150L 1.00e+0 BA.2.65
V2362 12469G>T missense_variant ORF1ab_pp1a G4157C 1.00e+0 BA.2.65
V2386 12559G>T missense_variant ORF1ab_pp1a D4187Y 1.00e+0 BA.2.65
V239 356G>T missense_variant ORF1ab_pp1a R119L 1.00e+0 BA.2.65
V2406 12752G>T missense_variant ORF1ab_pp1a R4251L 1.00e+0 BA.2.65
V2424 12992G>T missense_variant ORF1ab_pp1a R4331L 1.00e+0 BA.2.65
V243 371G>T missense_variant ORF1ab_pp1a R124L 1.00e+0 BA.2.65
V2438 13114G>T missense_variant ORF1ab_pp1a V4372F 1.00e+0 BA.2.65
V2439 13120G>T missense_variant ORF1ab_pp1a G4374C 1.00e+0 BA.2.65
V2445 13160G>T missense_variant ORF1ab_pp1a R4387L 1.00e+0 BA.2.65
V2446 13162G>T stop_gained ORF1ab_pp1a E4388* 1.00e+0 BA.2.65
V245 379G>T missense_variant ORF1ab_pp1a G127C 1.00e+0 BA.2.65
V2452 13204G>T missense_variant ORF1ab_pp1a G4402W 1.00e+0 BA.2.65
V2453 13213G>T missense_variant ORF1ab_pp1ab G4405C 1.00e+0 BA.2.65
V2456 13229G>T missense_variant ORF1ab_pp1ab R4410L 1.00e+0 BA.2.65
V2459 13243G>T missense_variant ORF1ab_pp1ab G4415C 1.00e+0 BA.2.65
V2463 13267G>T missense_variant ORF1ab_pp1ab V4423L 1.00e+0 BA.2.65
V2470 13340G>T missense_variant ORF1ab_pp1ab R4447L 1.00e+0 BA.2.65
V2474 13357G>T stop_gained ORF1ab_pp1ab E4453* 1.00e+0 BA.2.65
V2496 13498G>T missense_variant ORF1ab_pp1ab G4500C 1.00e+0 BA.2.65
V2500 13523G>T missense_variant ORF1ab_pp1ab R4508L 1.00e+0 BA.2.65
V2503 13529G>T missense_variant ORF1ab_pp1ab R4510L 1.00e+0 BA.2.65
V2507 13558G>T missense_variant ORF1ab_pp1ab V4520F 1.00e+0 BA.2.65
V251 409G>T missense_variant ORF1ab_pp1a G137C 1.00e+0 BA.2.65
V2528 13694G>T missense_variant ORF1ab_pp1ab R4565L 1.00e+0 BA.2.65
V2529 13696G>T missense_variant ORF1ab_pp1ab V4566L 1.00e+0 BA.2.65
V2532 13702G>T missense_variant ORF1ab_pp1ab A4568S 1.00e+0 BA.2.65
V2534 13718G>T missense_variant ORF1ab_pp1ab R4573L 1.00e+0 BA.2.65
V2535 13724G>T missense_variant ORF1ab_pp1ab R4575L 1.00e+0 BA.2.65
V2540 13766G>T missense_variant ORF1ab_pp1ab R4589L 1.00e+0 BA.2.65
V2543 13834G>T missense_variant ORF1ab_pp1ab G4612C 1.00e+0 BA.2.65
V255 412G>T missense_variant ORF1ab_pp1a A138S 1.00e+0 BA.2.65
V257 415G>T missense_variant ORF1ab_pp1a D139Y 1.00e+0 BA.2.65
V2584 14030G>T missense_variant ORF1ab_pp1ab R4677L 1.00e+0 BA.2.65
V2612 14320G>T missense_variant ORF1ab_pp1ab A4774S 1.00e+0 BA.2.65
V2615 14351G>T missense_variant ORF1ab_pp1ab R4784L 1.00e+0 BA.2.65
V2620 14413G>T missense_variant ORF1ab_pp1ab G4805C 1.00e+0 BA.2.65
V2631 14530G>T missense_variant ORF1ab_pp1ab D4844Y 1.00e+0 BA.2.65
V2632 14546G>T missense_variant ORF1ab_pp1ab R4849L 1.00e+0 BA.2.65
V2641 14659G>T missense_variant ORF1ab_pp1ab V4887F 1.00e+0 BA.2.65
V2652 14761G>T missense_variant ORF1ab_pp1ab A4921S 1.00e+0 BA.2.65
V2654 14774G>T missense_variant ORF1ab_pp1ab R4925L 1.00e+0 BA.2.65
V2656 14840G>T missense_variant ORF1ab_pp1ab R4947L 1.00e+0 BA.2.65
V2657 14845G>T missense_variant ORF1ab_pp1ab V4949L 1.00e+0 BA.2.65
V2660 14917G>T missense_variant ORF1ab_pp1ab A4973S 1.00e+0 BA.2.65
V2680 15095G>T missense_variant ORF1ab_pp1ab R5032L 1.00e+0 BA.2.65
V2687 15128G>T missense_variant ORF1ab_pp1ab R5043L 1.00e+0 BA.2.65
V269 439G>T missense_variant ORF1ab_pp1a D147Y 1.00e+0 BA.2.65
V2695 15187G>T missense_variant ORF1ab_pp1ab G5063C 1.00e+0 BA.2.65
V270 442G>T stop_gained ORF1ab_pp1a E148* 1.00e+0 BA.2.65
V2702 15325G>T missense_variant ORF1ab_pp1ab D5109Y 1.00e+0 BA.2.65
V2706 15338G>T missense_variant ORF1ab_pp1ab R5113L 1.00e+0 BA.2.65
V2715 15415G>T missense_variant ORF1ab_pp1ab A5139S 1.00e+0 BA.2.65
V2716 15425G>T missense_variant ORF1ab_pp1ab R5142L 1.00e+0 BA.2.65
V2719 15457G>T missense_variant ORF1ab_pp1ab D5153Y 1.00e+0 BA.2.65
V2743 15697G>T missense_variant ORF1ab_pp1ab G5233C 1.00e+0 BA.2.65
V2745 15718G>T missense_variant ORF1ab_pp1ab V5240L 1.00e+0 BA.2.65
V2746 15749G>T missense_variant ORF1ab_pp1ab R5250L 1.00e+0 BA.2.65
V2747 15754G>T missense_variant ORF1ab_pp1ab V5252L 1.00e+0 BA.2.65
V2772 16034G>T missense_variant ORF1ab_pp1ab R5345L 1.00e+0 BA.2.65
V2796 16273G>T missense_variant ORF1ab_pp1ab D5425Y 1.00e+0 BA.2.65
V2812 16436G>T missense_variant ORF1ab_pp1ab R5479L 1.00e+0 BA.2.65
V2822 16505G>T missense_variant ORF1ab_pp1ab R5502L 1.00e+0 BA.2.65
V2823 16529G>T missense_variant ORF1ab_pp1ab R5510L 1.00e+0 BA.2.65
V2834 16607G>T missense_variant ORF1ab_pp1ab R5536L 1.00e+0 BA.2.65
V285 512G>T missense_variant ORF1ab_pp1a R171L 1.00e+0 BA.2.65
V287 524G>T missense_variant ORF1ab_pp1a R175L 1.00e+0 BA.2.65
V2880 16880G>T missense_variant ORF1ab_pp1ab R5627L 1.00e+0 BA.2.65
V2884 16909G>T missense_variant ORF1ab_pp1ab A5637S 1.00e+0 BA.2.65
V289 535G>T stop_gained ORF1ab_pp1a G179* 1.00e+0 BA.2.65
V2894 16982G>T missense_variant ORF1ab_pp1ab R5661L 1.00e+0 BA.2.65
V2896 16988G>T missense_variant ORF1ab_pp1ab R5663L 1.00e+0 BA.2.65
V29 -142G>T upstream_gene_variant ORF1ab_pp1a None 9.53e-1 BA.2.65
V2919 17173G>T missense_variant ORF1ab_pp1ab D5725Y 1.00e+0 BA.2.65
V2923 17198G>T missense_variant ORF1ab_pp1ab R5733L 1.00e+0 BA.2.65
V2933 17287G>T stop_gained ORF1ab_pp1ab G5763* 1.00e+0 BA.2.65
V2935 17297G>T missense_variant ORF1ab_pp1ab R5766L 1.00e+0 BA.2.65
V2936 17300G>T missense_variant ORF1ab_pp1ab R5767L 1.00e+0 BA.2.65
V2956 17455G>T missense_variant ORF1ab_pp1ab V5819L 1.00e+0 BA.2.65
V296 551G>T missense_variant ORF1ab_pp1a R184L 1.00e+0 BA.2.65
V2960 17477G>T missense_variant ORF1ab_pp1ab R5826L 1.00e+0 BA.2.65
V297 559G>T missense_variant ORF1ab_pp1a D187Y 1.00e+0 BA.2.65
V2992 17753G>T missense_variant ORF1ab_pp1ab R5918L 9.53e-1 BA.2.65
V3016 17899A>T missense_variant ORF1ab_pp1ab I5967L 1.00e+0 BA.2.65
V3039 18002G>T missense_variant ORF1ab_pp1ab R6001L 1.00e+0 BA.2.65
V3040 18004G>T stop_gained ORF1ab_pp1ab E6002* 1.00e+0 BA.2.65
V3045 18026G>T missense_variant ORF1ab_pp1ab R6009L 1.00e+0 BA.2.65
V3048 18043G>T missense_variant ORF1ab_pp1ab D6015Y 1.00e+0 BA.2.65
V3049 18049G>T stop_gained ORF1ab_pp1ab E6017* 1.00e+0 BA.2.65
V3085 18263G>T missense_variant ORF1ab_pp1ab R6088L 1.00e+0 BA.2.65
V3092 18319G>T missense_variant ORF1ab_pp1ab V6107L 1.00e+0 BA.2.65
V3102 18389G>T missense_variant ORF1ab_pp1ab R6130L 1.00e+0 BA.2.65
V3105 18413G>T missense_variant ORF1ab_pp1ab R6138L 1.00e+0 BA.2.65
V311 620G>T missense_variant ORF1ab_pp1a R207L 1.00e+0 BA.2.65
V3115 18481G>T missense_variant ORF1ab_pp1ab V6161F 1.00e+0 BA.2.65
V3130 18625G>T stop_gained ORF1ab_pp1ab E6209* 1.00e+0 BA.2.65
V3135 18641G>T missense_variant ORF1ab_pp1ab R6214L 1.00e+0 BA.2.65
V3187 18943G>T missense_variant ORF1ab_pp1ab D6315Y 1.00e+0 BA.2.65
V321 649G>T stop_gained ORF1ab_pp1a E217* 1.00e+0 BA.2.65
V3216 19202G>T missense_variant ORF1ab_pp1ab R6401L 1.00e+0 BA.2.65
V3220 19261G>T missense_variant ORF1ab_pp1ab D6421Y 8.86e-1 BA.2.65
V3254 19538G>T missense_variant ORF1ab_pp1ab R6513L 1.00e+0 BA.2.65
V3293 19769G>T missense_variant ORF1ab_pp1ab R6590L 1.00e+0 BA.2.65
V3310 19870G>T missense_variant ORF1ab_pp1ab V6624L 1.00e+0 BA.2.65
V332 695G>T missense_variant ORF1ab_pp1a R232L 1.00e+0 BA.2.65
V3331 20027G>T missense_variant ORF1ab_pp1ab R6676L 1.00e+0 BA.2.65
V3334 20053G>T stop_gained ORF1ab_pp1ab E6685* 1.00e+0 BA.2.65
V3338 20062G>T missense_variant ORF1ab_pp1ab V6688F 1.00e+0 BA.2.65
V3345 20126G>T missense_variant ORF1ab_pp1ab R6709L 1.00e+0 BA.2.65
V336 731G>T missense_variant ORF1ab_pp1a R244L 1.00e+0 BA.2.65
V3415 20527G>T missense_variant ORF1ab_pp1ab A6843S 1.00e+0 BA.2.65
V3428 20683G>T missense_variant ORF1ab_pp1ab D6895Y 1.00e+0 BA.2.65
V3444 20791G>T missense_variant ORF1ab_pp1ab D6931Y 1.00e+0 BA.2.65
V3462 20893G>T missense_variant ORF1ab_pp1ab V6965L 1.00e+0 BA.2.65
V3475 20956G>T missense_variant ORF1ab_pp1ab A6986S 1.00e+0 BA.2.65
V3487 21041G>T missense_variant ORF1ab_pp1ab R7014L 9.53e-1 BA.2.65
V3488 21043G>T stop_gained ORF1ab_pp1ab E7015* 9.53e-1 BA.2.65
V3517 -5G>T upstream_gene_variant S None 1.00e+0 BA.2.65
V3562 101G>T missense_variant S R34L 9.53e-1 BA.2.65
V3621 367G>T missense_variant S A123S 1.00e+0 BA.2.65
V370 902G>T missense_variant ORF1ab_pp1a R301L 1.00e+0 BA.2.65
V3737 641G>T missense_variant S R214L 1.00e+0 BA.2.65
V38 -114G>T upstream_gene_variant ORF1ab_pp1a None 9.53e-1 BA.2.65
V3822 1030G>T missense_variant S A344S 9.53e-1 BA.2.65
V3857 1231G>T missense_variant S A411S 1.00e+0 BA.2.65
V3923 1478A>T missense_variant S Q493L 9.53e-1 BA.2.65
V3959 1730G>T missense_variant S R577L 9.53e-1 BA.2.65
V396 1003G>T missense_variant ORF1ab_pp1a D335Y 1.00e+0 BA.2.65
V3985 1901G>T missense_variant S R634L 1.00e+0 BA.2.65
V3991 1937G>T missense_variant S R646L 1.00e+0 BA.2.65
V4005 2014G>T missense_variant S A672S 1.00e+0 BA.2.65
V401 1024G>T stop_gained ORF1ab_pp1a E342* 1.00e+0 BA.2.65
V4025 2045G>T missense_variant S R682L 1.00e+0 BA.2.65
V4026 2048G>T missense_variant S R683L 1.00e+0 BA.2.65
V4029 2054G>T missense_variant S R685L 1.00e+0 BA.2.65
V4065 2294G>T missense_variant S R765L 1.00e+0 BA.2.65
V41 -101G>T upstream_gene_variant ORF1ab_pp1a None 9.53e-1 BA.2.65
V4109 2569G>T missense_variant S G857C 1.00e+0 BA.2.65
V4150 2948G>T missense_variant S R983L 1.00e+0 BA.2.65
V4185 3272G>T missense_variant S R1091L 1.00e+0 BA.2.65
V4235 3554G>T missense_variant S R1185L 1.00e+0 BA.2.65
V4244 3595G>T missense_variant S D1199Y 1.00e+0 BA.2.65
V4289 3778G>T missense_variant S D1260Y 1.00e+0 BA.2.65
V4302 -6G>T upstream_gene_variant ORF3a None 1.00e+0 BA.2.65
V4345 89G>T missense_variant ORF3a R30L 1.00e+0 BA.2.65
V4347 91G>T missense_variant ORF3a A31S 1.00e+0 BA.2.65
V437 1156G>T stop_gained ORF1ab_pp1a E386* 1.00e+0 BA.2.65
V4379 130G>T stop_gained ORF3a G44* 1.00e+0 BA.2.65
V4391 148G>T missense_variant ORF3a V50F 1.00e+0 BA.2.65
V4410 175G>T missense_variant ORF3a A59S 1.00e+0 BA.2.65
V4459 289G>T missense_variant ORF3a V97F 1.00e+0 BA.2.65
V446 1193G>T missense_variant ORF1ab_pp1a R398L 1.00e+0 BA.2.65
V4512 401G>T missense_variant ORF3a R134L 8.86e-1 BA.2.65
V4524 463G>T missense_variant ORF3a D155Y 9.57e-1 BA.2.65
V453 1205G>T missense_variant ORF1ab_pp1a R402L 1.00e+0 BA.2.65
V4614 751G>T missense_variant ORF3a G251C 1.00e+0 BA.2.65
V4620 760G>T stop_gained ORF3a G254* 1.00e+0 BA.2.65
V464 1277G>T missense_variant ORF1ab_pp1a R426L 1.00e+0 BA.2.65
V4652 817G>T missense_variant ORF3a V273L 9.20e-1 BA.2.65
V4672 70G>T missense_variant E V24L 1.00e+0 BA.2.65
V4678 145G>T missense_variant E V49L 1.00e+0 BA.2.65
V4685 172G>T missense_variant E V58F 1.00e+0 BA.2.65
V4686 182G>T missense_variant E R61L 9.57e-1 BA.2.65
V469 1285G>T missense_variant ORF1ab_pp1a A429S 1.00e+0 BA.2.65
V4722 16G>T missense_variant M G6C 1.00e+0 BA.2.65
V4757 232G>T missense_variant M G78C 1.00e+0 BA.2.65
V4763 247G>T missense_variant M A83S 1.00e+0 BA.2.65
V4772 320G>T missense_variant M R107L 1.00e+0 BA.2.65
V4782 473G>T missense_variant M R158L 1.00e+0 BA.2.65
V4784 521G>T missense_variant M R174L 1.00e+0 BA.2.65
V4788 593G>T missense_variant M R198L 1.00e+0 BA.2.65
V48 -92G>T upstream_gene_variant ORF1ab_pp1a None 9.09e-1 BA.2.65
V4800 13G>T missense_variant ORF6 V5F 1.00e+0 BA.2.65
V4812 59G>T missense_variant ORF6 R20M 1.00e+0 BA.2.65
V484 1330G>T stop_gained ORF1ab_pp1a E444* 1.00e+0 BA.2.65
V4844 -4G>T upstream_gene_variant ORF7a None 1.00e+0 BA.2.65
V4864 37G>T missense_variant ORF7a A13S 1.00e+0 BA.2.65
V4895 121G>T stop_gained ORF7a E41* 1.00e+0 BA.2.65
V4930 208G>T missense_variant ORF7a G70C 1.00e+0 BA.2.65
V4932 211G>T missense_variant ORF7a V71L 1.00e+0 BA.2.65
V4937 220G>T missense_variant ORF7a V74F 1.00e+0 BA.2.65
V4943 233G>T missense_variant ORF7a R78L 1.00e+0 BA.2.65
V511 1420G>T missense_variant ORF1ab_pp1a A474S 1.00e+0 BA.2.65
V5173 223G>T missense_variant ORF8 D75Y 8.53e-1 BA.2.65
V5176 229G>T missense_variant ORF8 G77C 7.27e-1 BA.2.65
V5196 302G>T missense_variant ORF8 R101L 9.53e-1 BA.2.65
V5209 340G>T missense_variant ORF8 V114F 9.53e-1 BA.2.65
V5212 344G>T missense_variant ORF8 R115L 9.53e-1 BA.2.65
V5234 -12G>T upstream_gene_variant N None 9.53e-1 BA.2.65
V5266 29G>T missense_variant N R10L 1.00e+0 BA.2.65
V5277 41G>T missense_variant N R14L 1.00e+0 BA.2.65
V5324 107G>T missense_variant N R36L 1.00e+0 BA.2.65
V5331 119G>T missense_variant N R40L 1.00e+0 BA.2.65
V5333 122G>T missense_variant N R41L 1.00e+0 BA.2.65
V5337 163G>T missense_variant N A55S 1.00e+0 BA.2.65
V5345 203G>T missense_variant N R68L 1.00e+0 BA.2.65
V5349 214G>T missense_variant N V72F 1.00e+0 BA.2.65
V5355 263G>T missense_variant N R88L 1.00e+0 BA.2.65
V5359 278G>T missense_variant N R93L 1.00e+0 BA.2.65
V5361 284G>T missense_variant N R95L 1.00e+0 BA.2.65
V5364 295G>T missense_variant N G99C 1.00e+0 BA.2.65
V5379 385G>T missense_variant N G129C 1.00e+0 BA.2.65
V5395 446G>T missense_variant N R149L 1.00e+0 BA.2.65
V5404 472G>T missense_variant N V158L 1.00e+0 BA.2.65
V5414 517G>T missense_variant N A173S 1.00e+0 BA.2.65
V5419 535G>T missense_variant N G179C 1.00e+0 BA.2.65
V5429 554G>T missense_variant N R185L 1.00e+0 BA.2.65
V5434 566G>T missense_variant N R189L 1.00e+0 BA.2.65
V5437 572G>T missense_variant N R191L 1.00e+0 BA.2.65
V5467 611G>T missense_variant N G204V 1.00e+0 BA.2.65
V5496 643G>T missense_variant N G215C 1.00e+0 BA.2.65
V5536 776G>T missense_variant N R259L 1.00e+0 BA.2.65
V5537 785G>T missense_variant N R262L 1.00e+0 BA.2.65
V554 1625G>T missense_variant ORF1ab_pp1a R542L 1.00e+0 BA.2.65
V5546 823G>T missense_variant N G275C 1.00e+0 BA.2.65
V5547 830G>T missense_variant N R277L 1.00e+0 BA.2.65
V556 1634G>T missense_variant ORF1ab_pp1a R545L 1.00e+0 BA.2.65
V5565 931G>T missense_variant N A311S 1.00e+0 BA.2.65
V5566 946G>T stop_gained N G316* 1.00e+0 BA.2.65
V5570 956G>T missense_variant N R319L 1.00e+0 BA.2.65
V5594 1075G>T missense_variant N A359S 8.86e-1 BA.2.65
V563 1649G>T missense_variant ORF1ab_pp1a R550L 1.00e+0 BA.2.65
V5652 1238G>T missense_variant N S413I 9.57e-1 BA.2.65
V5688 16G>T missense_variant ORF10 V6F 9.09e-1 BA.2.65
V5690 22G>T missense_variant ORF10 A8S 9.53e-1 BA.2.65
V5708 71G>T missense_variant ORF10 R24L 9.53e-1 BA.2.65
V574 1679G>T missense_variant ORF1ab_pp1a R560L 1.00e+0 BA.2.65
V581 1696G>T missense_variant ORF1ab_pp1a A566S 1.00e+0 BA.2.65
V5970 726G>T synonymous_variant ORF1ab_pp1a T242T 1.00e+0 BA.2.65
V6010 999G>T synonymous_variant ORF1ab_pp1a T333T 1.00e+0 BA.2.65
V61 -68G>T upstream_gene_variant ORF1ab_pp1a None 9.53e-1 BA.2.65
V6121 1830G>T synonymous_variant ORF1ab_pp1a S610S 1.00e+0 BA.2.65
V6165 2133G>T synonymous_variant ORF1ab_pp1a T711T 1.00e+0 BA.2.65
V631 1879G>T missense_variant ORF1ab_pp1a V627F 8.86e-1 BA.2.65
V6413 3942G>T synonymous_variant ORF1ab_pp1a A1314A 8.86e-1 BA.2.65
V6420 3990G>T synonymous_variant ORF1ab_pp1a P1330P 9.57e-1 BA.2.65
V643 1933G>T missense_variant ORF1ab_pp1a G645C 1.00e+0 BA.2.65
V6481 4455G>T synonymous_variant ORF1ab_pp1a A1485A 8.56e-1 BA.2.65
V6521 4743G>T synonymous_variant ORF1ab_pp1a T1581T 1.00e+0 BA.2.65
V657 1981G>T missense_variant ORF1ab_pp1a G661C 1.00e+0 BA.2.65
V6610 5364G>T synonymous_variant ORF1ab_pp1a T1788T 1.00e+0 BA.2.65
V6634 5592G>T synonymous_variant ORF1ab_pp1a T1864T 1.00e+0 BA.2.65
V6686 6006G>T synonymous_variant ORF1ab_pp1a T2002T 1.00e+0 BA.2.65
V6695 6072G>T synonymous_variant ORF1ab_pp1a S2024S 9.53e-1 BA.2.65
V6704 6099G>T synonymous_variant ORF1ab_pp1a A2033A 1.00e+0 BA.2.65
V6765 6585G>T synonymous_variant ORF1ab_pp1a P2195P 1.00e+0 BA.2.65
V6830 7128G>T synonymous_variant ORF1ab_pp1a P2376P 1.00e+0 BA.2.65
V6859 7410G>T synonymous_variant ORF1ab_pp1a A2470A 1.00e+0 BA.2.65
V6890 7671G>T synonymous_variant ORF1ab_pp1a A2557A 9.57e-1 BA.2.65
V69 -62G>T upstream_gene_variant ORF1ab_pp1a None 8.05e-1 BA.2.65
V6900 7752G>T synonymous_variant ORF1ab_pp1a A2584A 7.81e-1 BA.2.65
V6908 7791G>T synonymous_variant ORF1ab_pp1a T2597T 1.00e+0 BA.2.65
V6950 8088G>T synonymous_variant ORF1ab_pp1a A2696A 1.00e+0 BA.2.65
V6952 8103G>T synonymous_variant ORF1ab_pp1a A2701A 1.00e+0 BA.2.65
V7125 9537G>T synonymous_variant ORF1ab_pp1a A3179A 9.20e-1 BA.2.65
V7140 9606G>T synonymous_variant ORF1ab_pp1a T3202T 1.00e+0 BA.2.65
V72 -58G>T upstream_gene_variant ORF1ab_pp1a None 9.53e-1 BA.2.65
V7246 10377G>T synonymous_variant ORF1ab_pp1a T3459T 1.00e+0 BA.2.65
V747 2359G>T missense_variant ORF1ab_pp1a G787W 1.00e+0 BA.2.65
V7480 12249G>T synonymous_variant ORF1ab_pp1a T4083T 1.00e+0 BA.2.65
V7502 12504G>T synonymous_variant ORF1ab_pp1a A4168A 1.00e+0 BA.2.65
V752 2374G>T stop_gained ORF1ab_pp1a E792* 1.00e+0 BA.2.65
V7559 12936G>T synonymous_variant ORF1ab_pp1a P4312P 1.00e+0 BA.2.65
V7567 12975G>T synonymous_variant ORF1ab_pp1a S4325S 1.00e+0 BA.2.65
V7602 13194G>T synonymous_variant ORF1ab_pp1a S4398S 8.56e-1 BA.2.65
V7604 13239G>T synonymous_variant ORF1ab_pp1ab P4413P 1.00e+0 BA.2.65
V762 2452G>T missense_variant ORF1ab_pp1a G818C 1.00e+0 BA.2.65
V7677 13854G>T synonymous_variant ORF1ab_pp1ab T4618T 1.00e+0 BA.2.65
V7699 14004G>T synonymous_variant ORF1ab_pp1ab T4668T 1.00e+0 BA.2.65
V7751 14358G>T synonymous_variant ORF1ab_pp1ab T4786T 1.00e+0 BA.2.65
V782 2593G>T missense_variant ORF1ab_pp1a G865C 1.00e+0 BA.2.65
V7846 15108G>T synonymous_variant ORF1ab_pp1ab T5036T 9.57e-1 BA.2.65
V7869 15279G>T synonymous_variant ORF1ab_pp1ab T5093T 9.57e-1 BA.2.65
V787 2614G>T missense_variant ORF1ab_pp1a A872S 1.00e+0 BA.2.65
V7951 15957G>T synonymous_variant ORF1ab_pp1ab P5319P 1.00e+0 BA.2.65
V7974 16113G>T synonymous_variant ORF1ab_pp1ab P5371P 6.26e-1 BA.2.65
V8011 16383G>T synonymous_variant ORF1ab_pp1ab T5461T 1.00e+0 BA.2.65
V81 -47G>T upstream_gene_variant ORF1ab_pp1a None 9.53e-1 BA.2.65
V8101 17070G>T synonymous_variant ORF1ab_pp1ab T5690T 1.00e+0 BA.2.65
V8145 17415G>T synonymous_variant ORF1ab_pp1ab T5805T 9.57e-1 BA.2.65
V8296 18492G>T synonymous_variant ORF1ab_pp1ab P6164P 9.57e-1 BA.2.65
V8328 18696G>T synonymous_variant ORF1ab_pp1ab A6232A 1.00e+0 BA.2.65
V8388 19191G>T synonymous_variant ORF1ab_pp1ab T6397T 1.00e+0 BA.2.65
V8502 20205G>T synonymous_variant ORF1ab_pp1ab A6735A 1.00e+0 BA.2.65
V8519 20406G>T synonymous_variant ORF1ab_pp1ab A6802A 1.00e+0 BA.2.65
V8521 20415G>T synonymous_variant ORF1ab_pp1ab P6805P 8.86e-1 BA.2.65
V8547 20667G>T synonymous_variant ORF1ab_pp1ab T6889T 1.00e+0 BA.2.65
V8549 20673G>T synonymous_variant ORF1ab_pp1ab T6891T 1.00e+0 BA.2.65
V8592 20991G>T synonymous_variant ORF1ab_pp1ab A6997A 9.09e-1 BA.2.65
V8678 336G>T synonymous_variant S S112S 1.00e+0 BA.2.65
V8698 489G>T synonymous_variant S A163A 1.00e+0 BA.2.65
V8711 624G>T synonymous_variant S T208T 1.00e+0 BA.2.65
V8721 663G>T synonymous_variant S S221S 8.86e-1 BA.2.65
V8749 906G>T synonymous_variant S T302T 9.04e-1 BA.2.65
V882 2977G>T missense_variant ORF1ab_pp1a G993C 1.00e+0 BA.2.65
V8973 2637G>T synonymous_variant S A879A 1.00e+0 BA.2.65
V9003 2883G>T synonymous_variant S T961T 1.00e+0 BA.2.65
V9151 102G>T synonymous_variant ORF3a T34T 9.57e-1 BA.2.65
V9154 108G>T synonymous_variant ORF3a P36P 1.00e+0 BA.2.65
V9253 801G>T synonymous_variant ORF3a P267P 1.00e+0 BA.2.65
V9254 804G>T synonymous_variant ORF3a T268T 1.00e+0 BA.2.65
V9256 807G>T synonymous_variant ORF3a T269T 1.00e+0 BA.2.65
V9262 18G>T synonymous_variant E S6S 1.00e+0 BA.2.65
V9274 108G>T synonymous_variant E A36A 1.00e+0 BA.2.65
V9330 312G>T synonymous_variant M A104A 9.57e-1 BA.2.65
V9332 318G>T synonymous_variant M T106T 1.00e+0 BA.2.65
V9351 396G>T synonymous_variant M P132P 1.00e+0 BA.2.65
V9376 525G>T synonymous_variant M T175T 9.57e-1 BA.2.65
V9381 552G>T synonymous_variant M S184S 1.00e+0 BA.2.65
V9480 315G>T synonymous_variant ORF7a A105A 1.00e+0 BA.2.65
V9550 309G>T synonymous_variant ORF8 S103S 9.53e-1 BA.2.65
V9568 48G>T synonymous_variant N T16T 8.86e-1 BA.2.65
V9582 105G>T synonymous_variant N A35A 1.00e+0 BA.2.65
V9596 150G>T synonymous_variant N A50A 1.00e+0 BA.2.65
V9744 906G>T synonymous_variant N P302P 9.57e-1 BA.2.65
V9753 939G>T synonymous_variant N A313A 9.20e-1 BA.2.65
V9758 954G>T synonymous_variant N S318S 1.00e+0 BA.2.65
V9764 981G>T synonymous_variant N S327S 9.57e-1 BA.2.65
V9766 987G>T synonymous_variant N T329T 7.81e-1 BA.2.65
V978 3319G>T stop_gained ORF1ab_pp1a G1107* 9.53e-1 BA.2.65
V9797 1149G>T synonymous_variant N P383P 1.00e+0 BA.2.65
V9824 30G>T synonymous_variant ORF10 P10P 9.53e-1 BA.2.65
V9825 36G>T synonymous_variant ORF10 T12T 9.09e-1 BA.2.65
V988 3355G>T missense_variant ORF1ab_pp1a G1119C 1.00e+0 BA.2.65
V6698 6084G>A synonymous_variant ORF1ab_pp1a L2028L 7.07e-1 BA.5.2.9
V5367 307G>A missense_variant N D103N 6.32e-1 BA.5
V3192 18956C>T missense_variant ORF1ab_pp1ab A6319V 1.00e+0 B.1.326
V4337 77C>T missense_variant ORF3a S26L 1.00e+0 B.1.326
V4350 95C>T missense_variant ORF3a T32I 1.00e+0 B.1.326
V1002 3424G>T stop_gained ORF1ab_pp1a E1142* 1.00e+0 BA.2.10.3
V1026 3509G>T missense_variant ORF1ab_pp1a R1170L 1.00e+0 BA.2.10.3
V103 -20G>T upstream_gene_variant ORF1ab_pp1a None 1.00e+0 BA.2.10.3
V1047 3610G>T missense_variant ORF1ab_pp1a A1204S 1.00e+0 BA.2.10.3
V11 -194G>T upstream_gene_variant ORF1ab_pp1a None 7.91e-1 BA.2.10.3
V111 -10G>T upstream_gene_variant ORF1ab_pp1a None 1.00e+0 BA.2.10.3
V1133 4127G>T missense_variant ORF1ab_pp1a R1376L 9.51e-1 BA.2.10.3
V1139 4157G>T missense_variant ORF1ab_pp1a R1386L 9.51e-1 BA.2.10.3
V1146 4211G>T missense_variant ORF1ab_pp1a R1404L 1.00e+0 BA.2.10.3
V1159 4318G>T missense_variant ORF1ab_pp1a D1440Y 9.51e-1 BA.2.10.3
V1164 4391G>T missense_variant ORF1ab_pp1a R1464L 1.00e+0 BA.2.10.3
V118 28G>T stop_gained ORF1ab_pp1a E10* 1.00e+0 BA.2.10.3
V120 40G>T missense_variant ORF1ab_pp1a V14F 1.00e+0 BA.2.10.3
V124 71G>T missense_variant ORF1ab_pp1a R24L 1.00e+0 BA.2.10.3
V125 73G>T missense_variant ORF1ab_pp1a D25Y 1.00e+0 BA.2.10.3
V1252 4883G>T missense_variant ORF1ab_pp1a R1628L 1.00e+0 BA.2.10.3
V126 76G>T missense_variant ORF1ab_pp1a V26L 1.00e+0 BA.2.10.3
V1298 5248G>T missense_variant ORF1ab_pp1a V1750L 1.00e+0 BA.2.10.3
V130 82G>T missense_variant ORF1ab_pp1a V28L 1.00e+0 BA.2.10.3
V132 86G>T missense_variant ORF1ab_pp1a R29L 1.00e+0 BA.2.10.3
V1345 5548G>T missense_variant ORF1ab_pp1a G1850C 1.00e+0 BA.2.10.3
V1374 5767G>T missense_variant ORF1ab_pp1a A1923S 1.00e+0 BA.2.10.3
V139 103G>T missense_variant ORF1ab_pp1a V35L 1.00e+0 BA.2.10.3
V1409 6032G>T missense_variant ORF1ab_pp1a R2011L 1.00e+0 BA.2.10.3
V1432 6097G>T missense_variant ORF1ab_pp1a A2033S 1.00e+0 BA.2.10.3
V1439 6124G>T stop_gained ORF1ab_pp1a E2042* 1.00e+0 BA.2.10.3
V1458 6181G>T missense_variant ORF1ab_pp1a V2061F 1.00e+0 BA.2.10.3
V146 128G>T missense_variant ORF1ab_pp1a R43L 1.00e+0 BA.2.10.3
V1464 6208G>T stop_gained ORF1ab_pp1a E2070* 1.00e+0 BA.2.10.3
V1544 6476G>T missense_variant ORF1ab_pp1a R2159L 1.00e+0 BA.2.10.3
V1546 6488G>T missense_variant ORF1ab_pp1a R2163L 1.00e+0 BA.2.10.3
V1565 6619G>T missense_variant ORF1ab_pp1a G2207C 1.00e+0 BA.2.10.3
V1578 6742G>T missense_variant ORF1ab_pp1a A2248S 1.00e+0 BA.2.10.3
V162 178G>T missense_variant ORF1ab_pp1a V60F 1.00e+0 BA.2.10.3
V1644 7207G>T missense_variant ORF1ab_pp1a G2403C 1.00e+0 BA.2.10.3
V1649 7244G>T missense_variant ORF1ab_pp1a R2415L 1.00e+0 BA.2.10.3
V1651 7264G>T stop_gained ORF1ab_pp1a E2422* 1.00e+0 BA.2.10.3
V1662 7471G>T missense_variant ORF1ab_pp1a V2491F 1.00e+0 BA.2.10.3
V168 218G>T missense_variant ORF1ab_pp1a R73L 1.00e+0 BA.2.10.3
V1712 7783G>T missense_variant ORF1ab_pp1a V2595F 1.00e+0 BA.2.10.3
V1716 7810G>T missense_variant ORF1ab_pp1a V2604L 1.00e+0 BA.2.10.3
V1743 7913G>T missense_variant ORF1ab_pp1a R2638L 1.00e+0 BA.2.10.3
V175 230G>T missense_variant ORF1ab_pp1a R77L 1.00e+0 BA.2.10.3
V1753 8002G>T missense_variant ORF1ab_pp1a D2668Y 1.00e+0 BA.2.10.3
V1760 8057G>T missense_variant ORF1ab_pp1a R2686L 1.00e+0 BA.2.10.3
V1766 8090G>T missense_variant ORF1ab_pp1a R2697L 1.00e+0 BA.2.10.3
V1774 8143G>T missense_variant ORF1ab_pp1a V2715F 1.00e+0 BA.2.10.3
V1777 8177G>T missense_variant ORF1ab_pp1a R2726L 1.00e+0 BA.2.10.3
V1778 8189G>T missense_variant ORF1ab_pp1a R2730L 1.00e+0 BA.2.10.3
V1819 8453G>T missense_variant ORF1ab_pp1a R2818L 1.00e+0 BA.2.10.3
V1829 8522G>T missense_variant ORF1ab_pp1a R2841L 1.00e+0 BA.2.10.3
V1846 8596G>T missense_variant ORF1ab_pp1a V2866L 1.00e+0 BA.2.10.3
V1857 8624G>T missense_variant ORF1ab_pp1a R2875L 1.00e+0 BA.2.10.3
V1883 8846G>T missense_variant ORF1ab_pp1a R2949L 9.51e-1 BA.2.10.3
V1886 8858G>T missense_variant ORF1ab_pp1a R2953L 9.51e-1 BA.2.10.3
V1900 8959G>T missense_variant ORF1ab_pp1a G2987C 9.51e-1 BA.2.10.3
V1907 9079C>T missense_variant ORF1ab_pp1a L3027F -6.91e-1 BA.2.10.3
V1961 9491G>T missense_variant ORF1ab_pp1a R3164L 1.00e+0 BA.2.10.3
V1964 9581G>T missense_variant ORF1ab_pp1a R3194L 1.00e+0 BA.2.10.3
V1979 9703G>T missense_variant ORF1ab_pp1a A3235S 1.00e+0 BA.2.10.3
V1993 9874G>T missense_variant ORF1ab_pp1a G3292C 1.00e+0 BA.2.10.3
V1997 9892G>T missense_variant ORF1ab_pp1a V3298L 1.00e+0 BA.2.10.3
V2005 9968G>T missense_variant ORF1ab_pp1a R3323L 7.91e-1 BA.2.10.3
V2055 10417G>T missense_variant ORF1ab_pp1a A3473S 1.00e+0 BA.2.10.3
V2060 10454G>T missense_variant ORF1ab_pp1a R3485L 1.00e+0 BA.2.10.3
V207 277G>T stop_gained ORF1ab_pp1a E93* 1.00e+0 BA.2.10.3
V2079 10570G>T missense_variant ORF1ab_pp1a V3524F 1.00e+0 BA.2.10.3
V2087 10625G>T missense_variant ORF1ab_pp1a R3542L 1.00e+0 BA.2.10.3
V21 -165G>T upstream_gene_variant ORF1ab_pp1a None 8.48e-1 BA.2.10.3
V212 292G>T missense_variant ORF1ab_pp1a G98C 1.00e+0 BA.2.10.3
V215 296G>T missense_variant ORF1ab_pp1a R99L 1.00e+0 BA.2.10.3
V2151 10985G>T missense_variant ORF1ab_pp1a R3662L 1.00e+0 BA.2.10.3
V2188 11152G>T missense_variant ORF1ab_pp1a V3718F 1.00e+0 BA.2.10.3
V2238 11405G>T missense_variant ORF1ab_pp1a R3802L 1.00e+0 BA.2.10.3
V228 337G>T stop_gained ORF1ab_pp1a E113* 1.00e+0 BA.2.10.3
V2310 11978G>T missense_variant ORF1ab_pp1a R3993L 1.00e+0 BA.2.10.3
V2313 11996G>T missense_variant ORF1ab_pp1a R3999L 1.00e+0 BA.2.10.3
V2358 12449G>T missense_variant ORF1ab_pp1a R4150L 1.00e+0 BA.2.10.3
V2362 12469G>T missense_variant ORF1ab_pp1a G4157C 1.00e+0 BA.2.10.3
V2386 12559G>T missense_variant ORF1ab_pp1a D4187Y 9.01e-1 BA.2.10.3
V239 356G>T missense_variant ORF1ab_pp1a R119L 1.00e+0 BA.2.10.3
V2406 12752G>T missense_variant ORF1ab_pp1a R4251L 1.00e+0 BA.2.10.3
V2424 12992G>T missense_variant ORF1ab_pp1a R4331L 1.00e+0 BA.2.10.3
V243 371G>T missense_variant ORF1ab_pp1a R124L 1.00e+0 BA.2.10.3
V2438 13114G>T missense_variant ORF1ab_pp1a V4372F 7.91e-1 BA.2.10.3
V2439 13120G>T missense_variant ORF1ab_pp1a G4374C 7.91e-1 BA.2.10.3
V2445 13160G>T missense_variant ORF1ab_pp1a R4387L 7.91e-1 BA.2.10.3
V2446 13162G>T stop_gained ORF1ab_pp1a E4388* 7.91e-1 BA.2.10.3
V245 379G>T missense_variant ORF1ab_pp1a G127C 1.00e+0 BA.2.10.3
V2452 13204G>T missense_variant ORF1ab_pp1a G4402W 8.48e-1 BA.2.10.3
V2453 13213G>T missense_variant ORF1ab_pp1ab G4405C 8.48e-1 BA.2.10.3
V2456 13229G>T missense_variant ORF1ab_pp1ab R4410L 8.48e-1 BA.2.10.3
V2459 13243G>T missense_variant ORF1ab_pp1ab G4415C 8.48e-1 BA.2.10.3
V2463 13267G>T missense_variant ORF1ab_pp1ab V4423L 9.51e-1 BA.2.10.3
V2470 13340G>T missense_variant ORF1ab_pp1ab R4447L 1.00e+0 BA.2.10.3
V2474 13357G>T stop_gained ORF1ab_pp1ab E4453* 1.00e+0 BA.2.10.3
V2496 13498G>T missense_variant ORF1ab_pp1ab G4500C 1.00e+0 BA.2.10.3
V2500 13523G>T missense_variant ORF1ab_pp1ab R4508L 1.00e+0 BA.2.10.3
V2503 13529G>T missense_variant ORF1ab_pp1ab R4510L 1.00e+0 BA.2.10.3
V2507 13558G>T missense_variant ORF1ab_pp1ab V4520F 9.51e-1 BA.2.10.3
V251 409G>T missense_variant ORF1ab_pp1a G137C 1.00e+0 BA.2.10.3
V2528 13694G>T missense_variant ORF1ab_pp1ab R4565L 9.51e-1 BA.2.10.3
V2529 13696G>T missense_variant ORF1ab_pp1ab V4566L 9.51e-1 BA.2.10.3
V2532 13702G>T missense_variant ORF1ab_pp1ab A4568S 9.51e-1 BA.2.10.3
V2534 13718G>T missense_variant ORF1ab_pp1ab R4573L 1.00e+0 BA.2.10.3
V2535 13724G>T missense_variant ORF1ab_pp1ab R4575L 1.00e+0 BA.2.10.3
V2540 13766G>T missense_variant ORF1ab_pp1ab R4589L 1.00e+0 BA.2.10.3
V2543 13834G>T missense_variant ORF1ab_pp1ab G4612C 1.00e+0 BA.2.10.3
V255 412G>T missense_variant ORF1ab_pp1a A138S 1.00e+0 BA.2.10.3
V257 415G>T missense_variant ORF1ab_pp1a D139Y 1.00e+0 BA.2.10.3
V2584 14030G>T missense_variant ORF1ab_pp1ab R4677L 1.00e+0 BA.2.10.3
V2612 14320G>T missense_variant ORF1ab_pp1ab A4774S 1.00e+0 BA.2.10.3
V2615 14351G>T missense_variant ORF1ab_pp1ab R4784L 1.00e+0 BA.2.10.3
V2620 14413G>T missense_variant ORF1ab_pp1ab G4805C 1.00e+0 BA.2.10.3
V2631 14530G>T missense_variant ORF1ab_pp1ab D4844Y 1.00e+0 BA.2.10.3
V2632 14546G>T missense_variant ORF1ab_pp1ab R4849L 1.00e+0 BA.2.10.3
V2641 14659G>T missense_variant ORF1ab_pp1ab V4887F 1.00e+0 BA.2.10.3
V2652 14761G>T missense_variant ORF1ab_pp1ab A4921S 1.00e+0 BA.2.10.3
V2654 14774G>T missense_variant ORF1ab_pp1ab R4925L 1.00e+0 BA.2.10.3
V2656 14840G>T missense_variant ORF1ab_pp1ab R4947L 1.00e+0 BA.2.10.3
V2657 14845G>T missense_variant ORF1ab_pp1ab V4949L 1.00e+0 BA.2.10.3
V2660 14917G>T missense_variant ORF1ab_pp1ab A4973S 1.00e+0 BA.2.10.3
V2680 15095G>T missense_variant ORF1ab_pp1ab R5032L 1.00e+0 BA.2.10.3
V2687 15128G>T missense_variant ORF1ab_pp1ab R5043L 1.00e+0 BA.2.10.3
V269 439G>T missense_variant ORF1ab_pp1a D147Y 1.00e+0 BA.2.10.3
V2695 15187G>T missense_variant ORF1ab_pp1ab G5063C 1.00e+0 BA.2.10.3
V270 442G>T stop_gained ORF1ab_pp1a E148* 1.00e+0 BA.2.10.3
V2702 15325G>T missense_variant ORF1ab_pp1ab D5109Y 9.51e-1 BA.2.10.3
V2706 15338G>T missense_variant ORF1ab_pp1ab R5113L 1.00e+0 BA.2.10.3
V2715 15415G>T missense_variant ORF1ab_pp1ab A5139S 1.00e+0 BA.2.10.3
V2716 15425G>T missense_variant ORF1ab_pp1ab R5142L 1.00e+0 BA.2.10.3
V2719 15457G>T missense_variant ORF1ab_pp1ab D5153Y 1.00e+0 BA.2.10.3
V2743 15697G>T missense_variant ORF1ab_pp1ab G5233C 1.00e+0 BA.2.10.3
V2745 15718G>T missense_variant ORF1ab_pp1ab V5240L 1.00e+0 BA.2.10.3
V2746 15749G>T missense_variant ORF1ab_pp1ab R5250L 1.00e+0 BA.2.10.3
V2747 15754G>T missense_variant ORF1ab_pp1ab V5252L 1.00e+0 BA.2.10.3
V2772 16034G>T missense_variant ORF1ab_pp1ab R5345L 9.01e-1 BA.2.10.3
V2773 16078T>C missense_variant ORF1ab_pp1ab S5360P -8.28e-1 BA.2.10.3
V2796 16273G>T missense_variant ORF1ab_pp1ab D5425Y 9.51e-1 BA.2.10.3
V2812 16436G>T missense_variant ORF1ab_pp1ab R5479L 9.51e-1 BA.2.10.3
V2822 16505G>T missense_variant ORF1ab_pp1ab R5502L 9.51e-1 BA.2.10.3
V2823 16529G>T missense_variant ORF1ab_pp1ab R5510L 9.01e-1 BA.2.10.3
V285 512G>T missense_variant ORF1ab_pp1a R171L 1.00e+0 BA.2.10.3
V287 524G>T missense_variant ORF1ab_pp1a R175L 1.00e+0 BA.2.10.3
V2880 16880G>T missense_variant ORF1ab_pp1ab R5627L 9.51e-1 BA.2.10.3
V2884 16909G>T missense_variant ORF1ab_pp1ab A5637S 9.51e-1 BA.2.10.3
V289 535G>T stop_gained ORF1ab_pp1a G179* 1.00e+0 BA.2.10.3
V2894 16982G>T missense_variant ORF1ab_pp1ab R5661L 9.51e-1 BA.2.10.3
V2896 16988G>T missense_variant ORF1ab_pp1ab R5663L 9.51e-1 BA.2.10.3
V29 -142G>T upstream_gene_variant ORF1ab_pp1a None 8.48e-1 BA.2.10.3
V2918 17146C>T missense_variant ORF1ab_pp1ab R5716C -9.05e-1 BA.2.10.3
V2923 17198G>T missense_variant ORF1ab_pp1ab R5733L 6.66e-1 BA.2.10.3
V2933 17287G>T stop_gained ORF1ab_pp1ab G5763* 8.48e-1 BA.2.10.3
V2935 17297G>T missense_variant ORF1ab_pp1ab R5766L 9.01e-1 BA.2.10.3
V2936 17300G>T missense_variant ORF1ab_pp1ab R5767L 9.01e-1 BA.2.10.3
V2956 17455G>T missense_variant ORF1ab_pp1ab V5819L 1.00e+0 BA.2.10.3
V296 551G>T missense_variant ORF1ab_pp1a R184L 1.00e+0 BA.2.10.3
V2960 17477G>T missense_variant ORF1ab_pp1ab R5826L 1.00e+0 BA.2.10.3
V297 559G>T missense_variant ORF1ab_pp1a D187Y 1.00e+0 BA.2.10.3
V2992 17753G>T missense_variant ORF1ab_pp1ab R5918L 9.01e-1 BA.2.10.3
V3015 17899A>G missense_variant ORF1ab_pp1ab I5967V -8.20e-1 BA.2.10.3
V3039 18002G>T missense_variant ORF1ab_pp1ab R6001L 7.91e-1 BA.2.10.3
V3040 18004G>T stop_gained ORF1ab_pp1ab E6002* 7.91e-1 BA.2.10.3
V3045 18026G>T missense_variant ORF1ab_pp1ab R6009L 8.48e-1 BA.2.10.3
V3048 18043G>T missense_variant ORF1ab_pp1ab D6015Y 8.48e-1 BA.2.10.3
V3049 18049G>T stop_gained ORF1ab_pp1ab E6017* 8.48e-1 BA.2.10.3
V3085 18263G>T missense_variant ORF1ab_pp1ab R6088L 1.00e+0 BA.2.10.3
V3092 18319G>T missense_variant ORF1ab_pp1ab V6107L 1.00e+0 BA.2.10.3
V3102 18389G>T missense_variant ORF1ab_pp1ab R6130L 1.00e+0 BA.2.10.3
V3105 18413G>T missense_variant ORF1ab_pp1ab R6138L 1.00e+0 BA.2.10.3
V311 620G>T missense_variant ORF1ab_pp1a R207L 1.00e+0 BA.2.10.3
V3115 18481G>T missense_variant ORF1ab_pp1ab V6161F 1.00e+0 BA.2.10.3
V3130 18625G>T stop_gained ORF1ab_pp1ab E6209* 1.00e+0 BA.2.10.3
V3135 18641G>T missense_variant ORF1ab_pp1ab R6214L 1.00e+0 BA.2.10.3
V3187 18943G>T missense_variant ORF1ab_pp1ab D6315Y 9.51e-1 BA.2.10.3
V321 649G>T stop_gained ORF1ab_pp1a E217* 1.00e+0 BA.2.10.3
V3216 19202G>T missense_variant ORF1ab_pp1ab R6401L 1.00e+0 BA.2.10.3
V3220 19261G>T missense_variant ORF1ab_pp1ab D6421Y 1.00e+0 BA.2.10.3
V3254 19538G>T missense_variant ORF1ab_pp1ab R6513L 1.00e+0 BA.2.10.3
V3293 19769G>T missense_variant ORF1ab_pp1ab R6590L 1.00e+0 BA.2.10.3
V3310 19870G>T missense_variant ORF1ab_pp1ab V6624L 1.00e+0 BA.2.10.3
V332 695G>T missense_variant ORF1ab_pp1a R232L 1.00e+0 BA.2.10.3
V3331 20027G>T missense_variant ORF1ab_pp1ab R6676L 1.00e+0 BA.2.10.3
V3334 20053G>T stop_gained ORF1ab_pp1ab E6685* 1.00e+0 BA.2.10.3
V3338 20062G>T missense_variant ORF1ab_pp1ab V6688F 1.00e+0 BA.2.10.3
V3345 20126G>T missense_variant ORF1ab_pp1ab R6709L 1.00e+0 BA.2.10.3
V336 731G>T missense_variant ORF1ab_pp1a R244L 1.00e+0 BA.2.10.3
V3415 20527G>T missense_variant ORF1ab_pp1ab A6843S 9.51e-1 BA.2.10.3
V3428 20683G>T missense_variant ORF1ab_pp1ab D6895Y 9.01e-1 BA.2.10.3
V3444 20791G>T missense_variant ORF1ab_pp1ab D6931Y 9.51e-1 BA.2.10.3
V3462 20893G>T missense_variant ORF1ab_pp1ab V6965L 9.51e-1 BA.2.10.3
V3475 20956G>T missense_variant ORF1ab_pp1ab A6986S 9.51e-1 BA.2.10.3
V3487 21041G>T missense_variant ORF1ab_pp1ab R7014L 9.51e-1 BA.2.10.3
V3488 21043G>T stop_gained ORF1ab_pp1ab E7015* 9.51e-1 BA.2.10.3
V3517 -5G>T upstream_gene_variant S None 9.51e-1 BA.2.10.3
V3562 101G>T missense_variant S R34L 6.66e-1 BA.2.10.3
V3621 367G>T missense_variant S A123S 1.00e+0 BA.2.10.3
V370 902G>T missense_variant ORF1ab_pp1a R301L 1.00e+0 BA.2.10.3
V3735 638T>G missense_variant S V213G -8.64e-1 BA.2.10.3
V3737 641G>T missense_variant S R214L 1.00e+0 BA.2.10.3
V38 -114G>T upstream_gene_variant ORF1ab_pp1a None 9.01e-1 BA.2.10.3
V3820 1016G>A missense_variant S G339D -6.38e-1 BA.2.10.3
V3840 1112C>T missense_variant S S371F -6.07e-1 BA.2.10.3
V3841 1117T>C missense_variant S S373P -6.74e-1 BA.2.10.3
V3843 1124C>T missense_variant S S375F -6.56e-1 BA.2.10.3
V3844 1126A>G missense_variant S T376A -7.28e-1 BA.2.10.3
V3930 1513T>C missense_variant S Y505H -6.17e-1 BA.2.10.3
V3959 1730G>T missense_variant S R577L 9.01e-1 BA.2.10.3
V396 1003G>T missense_variant ORF1ab_pp1a D335Y 1.00e+0 BA.2.10.3
V3985 1901G>T missense_variant S R634L 9.51e-1 BA.2.10.3
V3991 1937G>T missense_variant S R646L 9.51e-1 BA.2.10.3
V4005 2014G>T missense_variant S A672S 9.51e-1 BA.2.10.3
V401 1024G>T stop_gained ORF1ab_pp1a E342* 1.00e+0 BA.2.10.3
V4025 2045G>T missense_variant S R682L 9.51e-1 BA.2.10.3
V4026 2048G>T missense_variant S R683L 9.51e-1 BA.2.10.3
V4029 2054G>T missense_variant S R685L 9.51e-1 BA.2.10.3
V4065 2294G>T missense_variant S R765L 9.51e-1 BA.2.10.3
V41 -101G>T upstream_gene_variant ORF1ab_pp1a None 9.51e-1 BA.2.10.3
V4109 2569G>T missense_variant S G857C 1.00e+0 BA.2.10.3
V4146 2907T>A missense_variant S N969K -6.04e-1 BA.2.10.3
V4185 3272G>T missense_variant S R1091L 9.51e-1 BA.2.10.3
V4244 3595G>T missense_variant S D1199Y 8.48e-1 BA.2.10.3
V4289 3778G>T missense_variant S D1260Y 9.51e-1 BA.2.10.3
V4302 -6G>T upstream_gene_variant ORF3a None 9.51e-1 BA.2.10.3
V4345 89G>T missense_variant ORF3a R30L 9.51e-1 BA.2.10.3
V4347 91G>T missense_variant ORF3a A31S 9.51e-1 BA.2.10.3
V437 1156G>T stop_gained ORF1ab_pp1a E386* 1.00e+0 BA.2.10.3
V4379 130G>T stop_gained ORF3a G44* 9.51e-1 BA.2.10.3
V4391 148G>T missense_variant ORF3a V50F 9.51e-1 BA.2.10.3
V4410 175G>T missense_variant ORF3a A59S 9.51e-1 BA.2.10.3
V4459 289G>T missense_variant ORF3a V97F 9.51e-1 BA.2.10.3
V446 1193G>T missense_variant ORF1ab_pp1a R398L 1.00e+0 BA.2.10.3
V4512 401G>T missense_variant ORF3a R134L 9.51e-1 BA.2.10.3
V4524 463G>T missense_variant ORF3a D155Y 9.51e-1 BA.2.10.3
V453 1205G>T missense_variant ORF1ab_pp1a R402L 1.00e+0 BA.2.10.3
V464 1277G>T missense_variant ORF1ab_pp1a R426L 1.00e+0 BA.2.10.3
V4663 26C>T missense_variant E T9I -7.67e-1 BA.2.10.3
V469 1285G>T missense_variant ORF1ab_pp1a A429S 1.00e+0 BA.2.10.3
V4729 55C>G missense_variant M Q19E -6.22e-1 BA.2.10.3
V4742 187G>A missense_variant M A63T -7.67e-1 BA.2.10.3
V4784 521G>T missense_variant M R174L 7.31e-1 BA.2.10.3
V4788 593G>T missense_variant M R198L 8.48e-1 BA.2.10.3
V48 -92G>T upstream_gene_variant ORF1ab_pp1a None 9.51e-1 BA.2.10.3
V4800 13G>T missense_variant ORF6 V5F 8.48e-1 BA.2.10.3
V4812 59G>T missense_variant ORF6 R20M 9.01e-1 BA.2.10.3
V484 1330G>T stop_gained ORF1ab_pp1a E444* 9.51e-1 BA.2.10.3
V4844 -4G>T upstream_gene_variant ORF7a None 9.51e-1 BA.2.10.3
V4864 37G>T missense_variant ORF7a A13S 9.01e-1 BA.2.10.3
V4895 121G>T stop_gained ORF7a E41* 9.51e-1 BA.2.10.3
V4930 208G>T missense_variant ORF7a G70C 9.51e-1 BA.2.10.3
V4932 211G>T missense_variant ORF7a V71L 9.51e-1 BA.2.10.3
V4937 220G>T missense_variant ORF7a V74F 9.51e-1 BA.2.10.3
V4943 233G>T missense_variant ORF7a R78L 9.51e-1 BA.2.10.3
V511 1420G>T missense_variant ORF1ab_pp1a A474S 9.51e-1 BA.2.10.3
V5144 184G>T missense_variant ORF8 V62L 9.01e-1 BA.2.10.3
V5173 223G>T missense_variant ORF8 D75Y 9.01e-1 BA.2.10.3
V5176 229G>T missense_variant ORF8 G77C 9.01e-1 BA.2.10.3
V5196 302G>T missense_variant ORF8 R101L 9.51e-1 BA.2.10.3
V5209 340G>T missense_variant ORF8 V114F 9.51e-1 BA.2.10.3
V5212 344G>T missense_variant ORF8 R115L 9.51e-1 BA.2.10.3
V5234 -12G>T upstream_gene_variant N None 9.51e-1 BA.2.10.3
V5266 29G>T missense_variant N R10L 9.51e-1 BA.2.10.3
V5277 41G>T missense_variant N R14L 9.51e-1 BA.2.10.3
V5324 107G>T missense_variant N R36L 9.51e-1 BA.2.10.3
V5331 119G>T missense_variant N R40L 9.51e-1 BA.2.10.3
V5333 122G>T missense_variant N R41L 9.51e-1 BA.2.10.3
V5337 163G>T missense_variant N A55S 9.51e-1 BA.2.10.3
V5345 203G>T missense_variant N R68L 1.00e+0 BA.2.10.3
V5349 214G>T missense_variant N V72F 1.00e+0 BA.2.10.3
V5355 263G>T missense_variant N R88L 1.00e+0 BA.2.10.3
V5359 278G>T missense_variant N R93L 1.00e+0 BA.2.10.3
V5361 284G>T missense_variant N R95L 1.00e+0 BA.2.10.3
V5364 295G>T missense_variant N G99C 1.00e+0 BA.2.10.3
V5379 385G>T missense_variant N G129C 1.00e+0 BA.2.10.3
V5395 446G>T missense_variant N R149L 1.00e+0 BA.2.10.3
V5404 472G>T missense_variant N V158L 1.00e+0 BA.2.10.3
V5414 517G>T missense_variant N A173S 1.00e+0 BA.2.10.3
V5419 535G>T missense_variant N G179C 1.00e+0 BA.2.10.3
V5429 554G>T missense_variant N R185L 9.16e-1 BA.2.10.3
V5434 566G>T missense_variant N R189L 1.00e+0 BA.2.10.3
V5437 572G>T missense_variant N R191L 1.00e+0 BA.2.10.3
V5467 611G>T missense_variant N G204V 9.51e-1 BA.2.10.3
V5496 643G>T missense_variant N G215C 1.00e+0 BA.2.10.3
V5536 776G>T missense_variant N R259L 1.00e+0 BA.2.10.3
V5537 785G>T missense_variant N R262L 1.00e+0 BA.2.10.3
V554 1625G>T missense_variant ORF1ab_pp1a R542L 1.00e+0 BA.2.10.3
V5546 823G>T missense_variant N G275C 1.00e+0 BA.2.10.3
V5547 830G>T missense_variant N R277L 1.00e+0 BA.2.10.3
V556 1634G>T missense_variant ORF1ab_pp1a R545L 1.00e+0 BA.2.10.3
V5565 931G>T missense_variant N A311S 1.00e+0 BA.2.10.3
V5566 946G>T stop_gained N G316* 1.00e+0 BA.2.10.3
V5570 956G>T missense_variant N R319L 1.00e+0 BA.2.10.3
V5594 1075G>T missense_variant N A359S 1.00e+0 BA.2.10.3
V563 1649G>T missense_variant ORF1ab_pp1a R550L 1.00e+0 BA.2.10.3
V5652 1238G>T missense_variant N S413I 1.00e+0 BA.2.10.3
V5688 16G>T missense_variant ORF10 V6F 1.00e+0 BA.2.10.3
V5690 22G>T missense_variant ORF10 A8S 1.00e+0 BA.2.10.3
V5708 71G>T missense_variant ORF10 R24L 1.00e+0 BA.2.10.3
V574 1679G>T missense_variant ORF1ab_pp1a R560L 1.00e+0 BA.2.10.3
V5762 *4350G>T downstream_gene_variant S None 6.01e-1 BA.2.10.3
V5777 *4358G>T downstream_gene_variant S None 7.91e-1 BA.2.10.3
V5781 *4360G>T downstream_gene_variant S None 7.91e-1 BA.2.10.3
V5790 *4367G>T downstream_gene_variant S None 7.91e-1 BA.2.10.3
V5794 *4371G>T downstream_gene_variant S None 7.91e-1 BA.2.10.3
V581 1696G>T missense_variant ORF1ab_pp1a A566S 1.00e+0 BA.2.10.3
V5875 222G>T synonymous_variant ORF1ab_pp1a S74S 1.00e+0 BA.2.10.3
V5970 726G>T synonymous_variant ORF1ab_pp1a T242T 1.00e+0 BA.2.10.3
V5998 921G>T synonymous_variant ORF1ab_pp1a A307A 1.00e+0 BA.2.10.3
V6010 999G>T synonymous_variant ORF1ab_pp1a T333T 1.00e+0 BA.2.10.3
V61 -68G>T upstream_gene_variant ORF1ab_pp1a None 1.00e+0 BA.2.10.3
V6121 1830G>T synonymous_variant ORF1ab_pp1a S610S 1.00e+0 BA.2.10.3
V6165 2133G>T synonymous_variant ORF1ab_pp1a T711T 1.00e+0 BA.2.10.3
V631 1879G>T missense_variant ORF1ab_pp1a V627F 1.00e+0 BA.2.10.3
V6413 3942G>T synonymous_variant ORF1ab_pp1a A1314A 9.51e-1 BA.2.10.3
V6420 3990G>T synonymous_variant ORF1ab_pp1a P1330P 9.01e-1 BA.2.10.3
V643 1933G>T missense_variant ORF1ab_pp1a G645C 1.00e+0 BA.2.10.3
V6481 4455G>T synonymous_variant ORF1ab_pp1a A1485A 1.00e+0 BA.2.10.3
V6521 4743G>T synonymous_variant ORF1ab_pp1a T1581T 1.00e+0 BA.2.10.3
V657 1981G>T missense_variant ORF1ab_pp1a G661C 1.00e+0 BA.2.10.3
V6610 5364G>T synonymous_variant ORF1ab_pp1a T1788T 8.49e-1 BA.2.10.3
V6634 5592G>T synonymous_variant ORF1ab_pp1a T1864T 1.00e+0 BA.2.10.3
V6686 6006G>T synonymous_variant ORF1ab_pp1a T2002T 1.00e+0 BA.2.10.3
V6695 6072G>T synonymous_variant ORF1ab_pp1a S2024S 9.55e-1 BA.2.10.3
V6704 6099G>T synonymous_variant ORF1ab_pp1a A2033A 1.00e+0 BA.2.10.3
V6765 6585G>T synonymous_variant ORF1ab_pp1a P2195P 1.00e+0 BA.2.10.3
V6830 7128G>T synonymous_variant ORF1ab_pp1a P2376P 1.00e+0 BA.2.10.3
V6859 7410G>T synonymous_variant ORF1ab_pp1a A2470A 1.00e+0 BA.2.10.3
V6890 7671G>T synonymous_variant ORF1ab_pp1a A2557A 1.00e+0 BA.2.10.3
V69 -62G>T upstream_gene_variant ORF1ab_pp1a None 1.00e+0 BA.2.10.3
V6900 7752G>T synonymous_variant ORF1ab_pp1a A2584A 1.00e+0 BA.2.10.3
V6908 7791G>T synonymous_variant ORF1ab_pp1a T2597T 1.00e+0 BA.2.10.3
V6950 8088G>T synonymous_variant ORF1ab_pp1a A2696A 1.00e+0 BA.2.10.3
V6952 8103G>T synonymous_variant ORF1ab_pp1a A2701A 1.00e+0 BA.2.10.3
V7082 9159A>G synonymous_variant ORF1ab_pp1a V3053V -7.96e-1 BA.2.10.3
V7125 9537G>T synonymous_variant ORF1ab_pp1a A3179A 1.00e+0 BA.2.10.3
V7140 9606G>T synonymous_variant ORF1ab_pp1a T3202T 1.00e+0 BA.2.10.3
V72 -58G>T upstream_gene_variant ORF1ab_pp1a None 1.00e+0 BA.2.10.3
V7246 10377G>T synonymous_variant ORF1ab_pp1a T3459T 1.00e+0 BA.2.10.3
V747 2359G>T missense_variant ORF1ab_pp1a G787W 1.00e+0 BA.2.10.3
V7480 12249G>T synonymous_variant ORF1ab_pp1a T4083T 1.00e+0 BA.2.10.3
V7502 12504G>T synonymous_variant ORF1ab_pp1a A4168A 8.20e-1 BA.2.10.3
V752 2374G>T stop_gained ORF1ab_pp1a E792* 1.00e+0 BA.2.10.3
V7559 12936G>T synonymous_variant ORF1ab_pp1a P4312P 1.00e+0 BA.2.10.3
V7567 12975G>T synonymous_variant ORF1ab_pp1a S4325S 1.00e+0 BA.2.10.3
V7602 13194G>T synonymous_variant ORF1ab_pp1a S4398S 8.48e-1 BA.2.10.3
V7604 13239G>T synonymous_variant ORF1ab_pp1ab P4413P 8.48e-1 BA.2.10.3
V762 2452G>T missense_variant ORF1ab_pp1a G818C 1.00e+0 BA.2.10.3
V7677 13854G>T synonymous_variant ORF1ab_pp1ab T4618T 1.00e+0 BA.2.10.3
V7699 14004G>T synonymous_variant ORF1ab_pp1ab T4668T 9.51e-1 BA.2.10.3
V7751 14358G>T synonymous_variant ORF1ab_pp1ab T4786T 1.00e+0 BA.2.10.3
V782 2593G>T missense_variant ORF1ab_pp1a G865C 6.66e-1 BA.2.10.3
V7846 15108G>T synonymous_variant ORF1ab_pp1ab T5036T 1.00e+0 BA.2.10.3
V7869 15279G>T synonymous_variant ORF1ab_pp1ab T5093T 9.51e-1 BA.2.10.3
V7951 15957G>T synonymous_variant ORF1ab_pp1ab P5319P 1.00e+0 BA.2.10.3
V7974 16113G>T synonymous_variant ORF1ab_pp1ab P5371P 7.31e-1 BA.2.10.3
V8011 16383G>T synonymous_variant ORF1ab_pp1ab T5461T 9.51e-1 BA.2.10.3
V81 -47G>T upstream_gene_variant ORF1ab_pp1a None 9.55e-1 BA.2.10.3
V8101 17070G>T synonymous_variant ORF1ab_pp1ab T5690T 9.51e-1 BA.2.10.3
V8145 17415G>T synonymous_variant ORF1ab_pp1ab T5805T 1.00e+0 BA.2.10.3
V8252 18198G>T synonymous_variant ORF1ab_pp1ab P6066P 1.00e+0 BA.2.10.3
V8296 18492G>T synonymous_variant ORF1ab_pp1ab P6164P 1.00e+0 BA.2.10.3
V8328 18696G>T synonymous_variant ORF1ab_pp1ab A6232A 1.00e+0 BA.2.10.3
V8388 19191G>T synonymous_variant ORF1ab_pp1ab T6397T 1.00e+0 BA.2.10.3
V8446 19698G>T synonymous_variant ORF1ab_pp1ab T6566T 1.00e+0 BA.2.10.3
V8502 20205G>T synonymous_variant ORF1ab_pp1ab A6735A 1.00e+0 BA.2.10.3
V8519 20406G>T synonymous_variant ORF1ab_pp1ab A6802A 1.00e+0 BA.2.10.3
V8521 20415G>T synonymous_variant ORF1ab_pp1ab P6805P 1.00e+0 BA.2.10.3
V8547 20667G>T synonymous_variant ORF1ab_pp1ab T6889T 9.01e-1 BA.2.10.3
V8549 20673G>T synonymous_variant ORF1ab_pp1ab T6891T 9.01e-1 BA.2.10.3
V8592 20991G>T synonymous_variant ORF1ab_pp1ab A6997A 9.51e-1 BA.2.10.3
V8678 336G>T synonymous_variant S S112S 1.00e+0 BA.2.10.3
V8698 489G>T synonymous_variant S A163A 1.00e+0 BA.2.10.3
V8711 624G>T synonymous_variant S T208T 1.00e+0 BA.2.10.3
V8721 663G>T synonymous_variant S S221S 1.00e+0 BA.2.10.3
V8749 906G>T synonymous_variant S T302T 9.51e-1 BA.2.10.3
V882 2977G>T missense_variant ORF1ab_pp1a G993C 1.00e+0 BA.2.10.3
V9003 2883G>T synonymous_variant S T961T 7.31e-1 BA.2.10.3
V9151 102G>T synonymous_variant ORF3a T34T 9.05e-1 BA.2.10.3
V9154 108G>T synonymous_variant ORF3a P36P 9.51e-1 BA.2.10.3
V9334 336C>T synonymous_variant M F112F -6.19e-1 BA.2.10.3
V9376 525G>T synonymous_variant M T175T 7.31e-1 BA.2.10.3
V9381 552G>T synonymous_variant M S184S 7.91e-1 BA.2.10.3
V9480 315G>T synonymous_variant ORF7a A105A 9.51e-1 BA.2.10.3
V9523 108G>T synonymous_variant ORF8 P36P 7.37e-1 BA.2.10.3
V9550 309G>T synonymous_variant ORF8 S103S 9.51e-1 BA.2.10.3
V9568 48G>T synonymous_variant N T16T 9.51e-1 BA.2.10.3
V9596 150G>T synonymous_variant N A50A 9.51e-1 BA.2.10.3
V9744 906G>T synonymous_variant N P302P 1.00e+0 BA.2.10.3
V9753 939G>T synonymous_variant N A313A 1.00e+0 BA.2.10.3
V9758 954G>T synonymous_variant N S318S 1.00e+0 BA.2.10.3
V9764 981G>T synonymous_variant N S327S 1.00e+0 BA.2.10.3
V9766 987G>T synonymous_variant N T329T 1.00e+0 BA.2.10.3
V978 3319G>T stop_gained ORF1ab_pp1a G1107* 1.00e+0 BA.2.10.3
V9797 1149G>T synonymous_variant N P383P 1.00e+0 BA.2.10.3
V9824 30G>T synonymous_variant ORF10 P10P 1.00e+0 BA.2.10.3
V9825 36G>T synonymous_variant ORF10 T12T 1.00e+0 BA.2.10.3
V988 3355G>T missense_variant ORF1ab_pp1a G1119C 1.00e+0 BA.2.10.3
V1002 3424G>T stop_gained ORF1ab_pp1a E1142* 1.00e+0 BA.2.78
V1026 3509G>T missense_variant ORF1ab_pp1a R1170L 1.00e+0 BA.2.78
V103 -20G>T upstream_gene_variant ORF1ab_pp1a None 9.88e-1 BA.2.78
V1047 3610G>T missense_variant ORF1ab_pp1a A1204S 1.00e+0 BA.2.78
V11 -194G>T upstream_gene_variant ORF1ab_pp1a None 7.88e-1 BA.2.78
V111 -10G>T upstream_gene_variant ORF1ab_pp1a None 9.88e-1 BA.2.78
V1133 4127G>T missense_variant ORF1ab_pp1a R1376L 9.88e-1 BA.2.78
V1139 4157G>T missense_variant ORF1ab_pp1a R1386L 9.88e-1 BA.2.78
V1146 4211G>T missense_variant ORF1ab_pp1a R1404L 9.62e-1 BA.2.78
V1159 4318G>T missense_variant ORF1ab_pp1a D1440Y 9.11e-1 BA.2.78
V1164 4391G>T missense_variant ORF1ab_pp1a R1464L 9.37e-1 BA.2.78
V118 28G>T stop_gained ORF1ab_pp1a E10* 9.88e-1 BA.2.78
V120 40G>T missense_variant ORF1ab_pp1a V14F 9.88e-1 BA.2.78
V124 71G>T missense_variant ORF1ab_pp1a R24L 1.00e+0 BA.2.78
V125 73G>T missense_variant ORF1ab_pp1a D25Y 1.00e+0 BA.2.78
V1252 4883G>T missense_variant ORF1ab_pp1a R1628L 9.88e-1 BA.2.78
V126 76G>T missense_variant ORF1ab_pp1a V26L 1.00e+0 BA.2.78
V1298 5248G>T missense_variant ORF1ab_pp1a V1750L 1.00e+0 BA.2.78
V130 82G>T missense_variant ORF1ab_pp1a V28L 1.00e+0 BA.2.78
V132 86G>T missense_variant ORF1ab_pp1a R29L 1.00e+0 BA.2.78
V1345 5548G>T missense_variant ORF1ab_pp1a G1850C 1.00e+0 BA.2.78
V1374 5767G>T missense_variant ORF1ab_pp1a A1923S 1.00e+0 BA.2.78
V139 103G>T missense_variant ORF1ab_pp1a V35L 1.00e+0 BA.2.78
V1409 6032G>T missense_variant ORF1ab_pp1a R2011L 1.00e+0 BA.2.78
V1432 6097G>T missense_variant ORF1ab_pp1a A2033S 1.00e+0 BA.2.78
V1439 6124G>T stop_gained ORF1ab_pp1a E2042* 1.00e+0 BA.2.78
V1458 6181G>T missense_variant ORF1ab_pp1a V2061F 1.00e+0 BA.2.78
V146 128G>T missense_variant ORF1ab_pp1a R43L 1.00e+0 BA.2.78
V1464 6208G>T stop_gained ORF1ab_pp1a E2070* 1.00e+0 BA.2.78
V1544 6476G>T missense_variant ORF1ab_pp1a R2159L 1.00e+0 BA.2.78
V1546 6488G>T missense_variant ORF1ab_pp1a R2163L 1.00e+0 BA.2.78
V1565 6619G>T missense_variant ORF1ab_pp1a G2207C 1.00e+0 BA.2.78
V1578 6742G>T missense_variant ORF1ab_pp1a A2248S 1.00e+0 BA.2.78
V162 178G>T missense_variant ORF1ab_pp1a V60F 1.00e+0 BA.2.78
V1644 7207G>T missense_variant ORF1ab_pp1a G2403C 1.00e+0 BA.2.78
V1649 7244G>T missense_variant ORF1ab_pp1a R2415L 1.00e+0 BA.2.78
V1651 7264G>T stop_gained ORF1ab_pp1a E2422* 1.00e+0 BA.2.78
V1662 7471G>T missense_variant ORF1ab_pp1a V2491F 1.00e+0 BA.2.78
V168 218G>T missense_variant ORF1ab_pp1a R73L 1.00e+0 BA.2.78
V1712 7783G>T missense_variant ORF1ab_pp1a V2595F 1.00e+0 BA.2.78
V1716 7810G>T missense_variant ORF1ab_pp1a V2604L 1.00e+0 BA.2.78
V1743 7913G>T missense_variant ORF1ab_pp1a R2638L 1.00e+0 BA.2.78
V175 230G>T missense_variant ORF1ab_pp1a R77L 1.00e+0 BA.2.78
V1753 8002G>T missense_variant ORF1ab_pp1a D2668Y 1.00e+0 BA.2.78
V1760 8057G>T missense_variant ORF1ab_pp1a R2686L 9.88e-1 BA.2.78
V1766 8090G>T missense_variant ORF1ab_pp1a R2697L 9.88e-1 BA.2.78
V1774 8143G>T missense_variant ORF1ab_pp1a V2715F 9.88e-1 BA.2.78
V1777 8177G>T missense_variant ORF1ab_pp1a R2726L 1.00e+0 BA.2.78
V1778 8189G>T missense_variant ORF1ab_pp1a R2730L 1.00e+0 BA.2.78
V1819 8453G>T missense_variant ORF1ab_pp1a R2818L 1.00e+0 BA.2.78
V1829 8522G>T missense_variant ORF1ab_pp1a R2841L 1.00e+0 BA.2.78
V1846 8596G>T missense_variant ORF1ab_pp1a V2866L 1.00e+0 BA.2.78
V1857 8624G>T missense_variant ORF1ab_pp1a R2875L 1.00e+0 BA.2.78
V1883 8846G>T missense_variant ORF1ab_pp1a R2949L 1.00e+0 BA.2.78
V1886 8858G>T missense_variant ORF1ab_pp1a R2953L 1.00e+0 BA.2.78
V1900 8959G>T missense_variant ORF1ab_pp1a G2987C 1.00e+0 BA.2.78
V1961 9491G>T missense_variant ORF1ab_pp1a R3164L 1.00e+0 BA.2.78
V1964 9581G>T missense_variant ORF1ab_pp1a R3194L 1.00e+0 BA.2.78
V1979 9703G>T missense_variant ORF1ab_pp1a A3235S 1.00e+0 BA.2.78
V1993 9874G>T missense_variant ORF1ab_pp1a G3292C 9.50e-1 BA.2.78
V1997 9892G>T missense_variant ORF1ab_pp1a V3298L 9.24e-1 BA.2.78
V2005 9968G>T missense_variant ORF1ab_pp1a R3323L 8.44e-1 BA.2.78
V2021 10058A>G missense_variant ORF1ab_pp1a K3353R -6.07e-1 BA.2.78
V2030 10103G>T missense_variant ORF1ab_pp1a R3368L 8.85e-1 BA.2.78
V2055 10417G>T missense_variant ORF1ab_pp1a A3473S 1.00e+0 BA.2.78
V2060 10454G>T missense_variant ORF1ab_pp1a R3485L 1.00e+0 BA.2.78
V207 277G>T stop_gained ORF1ab_pp1a E93* 1.00e+0 BA.2.78
V2079 10570G>T missense_variant ORF1ab_pp1a V3524F 1.00e+0 BA.2.78
V2087 10625G>T missense_variant ORF1ab_pp1a R3542L 1.00e+0 BA.2.78
V21 -165G>T upstream_gene_variant ORF1ab_pp1a None 8.71e-1 BA.2.78
V212 292G>T missense_variant ORF1ab_pp1a G98C 1.00e+0 BA.2.78
V215 296G>T missense_variant ORF1ab_pp1a R99L 1.00e+0 BA.2.78
V2151 10985G>T missense_variant ORF1ab_pp1a R3662L 9.88e-1 BA.2.78
V2188 11152G>T missense_variant ORF1ab_pp1a V3718F 1.00e+0 BA.2.78
V2238 11405G>T missense_variant ORF1ab_pp1a R3802L 1.00e+0 BA.2.78
V228 337G>T stop_gained ORF1ab_pp1a E113* 1.00e+0 BA.2.78
V2310 11978G>T missense_variant ORF1ab_pp1a R3993L 1.00e+0 BA.2.78
V2313 11996G>T missense_variant ORF1ab_pp1a R3999L 1.00e+0 BA.2.78
V2358 12449G>T missense_variant ORF1ab_pp1a R4150L 1.00e+0 BA.2.78
V2362 12469G>T missense_variant ORF1ab_pp1a G4157C 1.00e+0 BA.2.78
V2386 12559G>T missense_variant ORF1ab_pp1a D4187Y 9.88e-1 BA.2.78
V239 356G>T missense_variant ORF1ab_pp1a R119L 1.00e+0 BA.2.78
V2406 12752G>T missense_variant ORF1ab_pp1a R4251L 9.88e-1 BA.2.78
V2424 12992G>T missense_variant ORF1ab_pp1a R4331L 9.88e-1 BA.2.78
V243 371G>T missense_variant ORF1ab_pp1a R124L 1.00e+0 BA.2.78
V2438 13114G>T missense_variant ORF1ab_pp1a V4372F 9.88e-1 BA.2.78
V2439 13120G>T missense_variant ORF1ab_pp1a G4374C 9.88e-1 BA.2.78
V2445 13160G>T missense_variant ORF1ab_pp1a R4387L 9.88e-1 BA.2.78
V2446 13162G>T stop_gained ORF1ab_pp1a E4388* 9.88e-1 BA.2.78
V245 379G>T missense_variant ORF1ab_pp1a G127C 1.00e+0 BA.2.78
V2452 13204G>T missense_variant ORF1ab_pp1a G4402W 9.88e-1 BA.2.78
V2453 13213G>T missense_variant ORF1ab_pp1ab G4405C 9.88e-1 BA.2.78
V2456 13229G>T missense_variant ORF1ab_pp1ab R4410L 9.88e-1 BA.2.78
V2459 13243G>T missense_variant ORF1ab_pp1ab G4415C 9.88e-1 BA.2.78
V2463 13267G>T missense_variant ORF1ab_pp1ab V4423L 9.88e-1 BA.2.78
V2470 13340G>T missense_variant ORF1ab_pp1ab R4447L 1.00e+0 BA.2.78
V2474 13357G>T stop_gained ORF1ab_pp1ab E4453* 1.00e+0 BA.2.78
V2496 13498G>T missense_variant ORF1ab_pp1ab G4500C 1.00e+0 BA.2.78
V2500 13523G>T missense_variant ORF1ab_pp1ab R4508L 1.00e+0 BA.2.78
V2503 13529G>T missense_variant ORF1ab_pp1ab R4510L 1.00e+0 BA.2.78
V2507 13558G>T missense_variant ORF1ab_pp1ab V4520F 1.00e+0 BA.2.78
V251 409G>T missense_variant ORF1ab_pp1a G137C 1.00e+0 BA.2.78
V2528 13694G>T missense_variant ORF1ab_pp1ab R4565L 1.00e+0 BA.2.78
V2529 13696G>T missense_variant ORF1ab_pp1ab V4566L 1.00e+0 BA.2.78
V2532 13702G>T missense_variant ORF1ab_pp1ab A4568S 1.00e+0 BA.2.78
V2534 13718G>T missense_variant ORF1ab_pp1ab R4573L 1.00e+0 BA.2.78
V2535 13724G>T missense_variant ORF1ab_pp1ab R4575L 1.00e+0 BA.2.78
V2540 13766G>T missense_variant ORF1ab_pp1ab R4589L 1.00e+0 BA.2.78
V2543 13834G>T missense_variant ORF1ab_pp1ab G4612C 1.00e+0 BA.2.78
V255 412G>T missense_variant ORF1ab_pp1a A138S 1.00e+0 BA.2.78
V257 415G>T missense_variant ORF1ab_pp1a D139Y 1.00e+0 BA.2.78
V2584 14030G>T missense_variant ORF1ab_pp1ab R4677L 9.88e-1 BA.2.78
V2612 14320G>T missense_variant ORF1ab_pp1ab A4774S 1.00e+0 BA.2.78
V2615 14351G>T missense_variant ORF1ab_pp1ab R4784L 1.00e+0 BA.2.78
V2620 14413G>T missense_variant ORF1ab_pp1ab G4805C 1.00e+0 BA.2.78
V2631 14530G>T missense_variant ORF1ab_pp1ab D4844Y 1.00e+0 BA.2.78
V2632 14546G>T missense_variant ORF1ab_pp1ab R4849L 1.00e+0 BA.2.78
V2641 14659G>T missense_variant ORF1ab_pp1ab V4887F 1.00e+0 BA.2.78
V2652 14761G>T missense_variant ORF1ab_pp1ab A4921S 1.00e+0 BA.2.78
V2654 14774G>T missense_variant ORF1ab_pp1ab R4925L 1.00e+0 BA.2.78
V2656 14840G>T missense_variant ORF1ab_pp1ab R4947L 1.00e+0 BA.2.78
V2657 14845G>T missense_variant ORF1ab_pp1ab V4949L 1.00e+0 BA.2.78
V2660 14917G>T missense_variant ORF1ab_pp1ab A4973S 1.00e+0 BA.2.78
V2680 15095G>T missense_variant ORF1ab_pp1ab R5032L 1.00e+0 BA.2.78
V2687 15128G>T missense_variant ORF1ab_pp1ab R5043L 1.00e+0 BA.2.78
V269 439G>T missense_variant ORF1ab_pp1a D147Y 1.00e+0 BA.2.78
V2695 15187G>T missense_variant ORF1ab_pp1ab G5063C 1.00e+0 BA.2.78
V270 442G>T stop_gained ORF1ab_pp1a E148* 1.00e+0 BA.2.78
V2702 15325G>T missense_variant ORF1ab_pp1ab D5109Y 1.00e+0 BA.2.78
V2706 15338G>T missense_variant ORF1ab_pp1ab R5113L 1.00e+0 BA.2.78
V2715 15415G>T missense_variant ORF1ab_pp1ab A5139S 1.00e+0 BA.2.78
V2716 15425G>T missense_variant ORF1ab_pp1ab R5142L 1.00e+0 BA.2.78
V2719 15457G>T missense_variant ORF1ab_pp1ab D5153Y 1.00e+0 BA.2.78
V2743 15697G>T missense_variant ORF1ab_pp1ab G5233C 1.00e+0 BA.2.78
V2745 15718G>T missense_variant ORF1ab_pp1ab V5240L 1.00e+0 BA.2.78
V2746 15749G>T missense_variant ORF1ab_pp1ab R5250L 1.00e+0 BA.2.78
V2747 15754G>T missense_variant ORF1ab_pp1ab V5252L 1.00e+0 BA.2.78
V2772 16034G>T missense_variant ORF1ab_pp1ab R5345L 1.00e+0 BA.2.78
V2796 16273G>T missense_variant ORF1ab_pp1ab D5425Y 9.88e-1 BA.2.78
V2812 16436G>T missense_variant ORF1ab_pp1ab R5479L 9.88e-1 BA.2.78
V2822 16505G>T missense_variant ORF1ab_pp1ab R5502L 9.88e-1 BA.2.78
V2823 16529G>T missense_variant ORF1ab_pp1ab R5510L 9.88e-1 BA.2.78
V2834 16607G>T missense_variant ORF1ab_pp1ab R5536L 9.75e-1 BA.2.78
V285 512G>T missense_variant ORF1ab_pp1a R171L 1.00e+0 BA.2.78
V287 524G>T missense_variant ORF1ab_pp1a R175L 1.00e+0 BA.2.78
V2880 16880G>T missense_variant ORF1ab_pp1ab R5627L 9.88e-1 BA.2.78
V2884 16909G>T missense_variant ORF1ab_pp1ab A5637S 9.88e-1 BA.2.78
V289 535G>T stop_gained ORF1ab_pp1a G179* 1.00e+0 BA.2.78
V2894 16982G>T missense_variant ORF1ab_pp1ab R5661L 9.75e-1 BA.2.78
V2896 16988G>T missense_variant ORF1ab_pp1ab R5663L 9.75e-1 BA.2.78
V29 -142G>T upstream_gene_variant ORF1ab_pp1a None 8.85e-1 BA.2.78
V2919 17173G>T missense_variant ORF1ab_pp1ab D5725Y 9.50e-1 BA.2.78
V2923 17198G>T missense_variant ORF1ab_pp1ab R5733L 9.62e-1 BA.2.78
V2933 17287G>T stop_gained ORF1ab_pp1ab G5763* 1.00e+0 BA.2.78
V2935 17297G>T missense_variant ORF1ab_pp1ab R5766L 1.00e+0 BA.2.78
V2936 17300G>T missense_variant ORF1ab_pp1ab R5767L 1.00e+0 BA.2.78
V2956 17455G>T missense_variant ORF1ab_pp1ab V5819L 1.00e+0 BA.2.78
V296 551G>T missense_variant ORF1ab_pp1a R184L 1.00e+0 BA.2.78
V2960 17477G>T missense_variant ORF1ab_pp1ab R5826L 1.00e+0 BA.2.78
V297 559G>T missense_variant ORF1ab_pp1a D187Y 1.00e+0 BA.2.78
V2992 17753G>T missense_variant ORF1ab_pp1ab R5918L 9.88e-1 BA.2.78
V3015 17899A>G missense_variant ORF1ab_pp1ab I5967V -9.64e-1 BA.2.78
V3016 17899A>T missense_variant ORF1ab_pp1ab I5967L 9.24e-1 BA.2.78
V3039 18002G>T missense_variant ORF1ab_pp1ab R6001L 9.62e-1 BA.2.78
V3040 18004G>T stop_gained ORF1ab_pp1ab E6002* 9.75e-1 BA.2.78
V3045 18026G>T missense_variant ORF1ab_pp1ab R6009L 1.00e+0 BA.2.78
V3048 18043G>T missense_variant ORF1ab_pp1ab D6015Y 1.00e+0 BA.2.78
V3049 18049G>T stop_gained ORF1ab_pp1ab E6017* 1.00e+0 BA.2.78
V3085 18263G>T missense_variant ORF1ab_pp1ab R6088L 1.00e+0 BA.2.78
V3092 18319G>T missense_variant ORF1ab_pp1ab V6107L 1.00e+0 BA.2.78
V3102 18389G>T missense_variant ORF1ab_pp1ab R6130L 1.00e+0 BA.2.78
V3105 18413G>T missense_variant ORF1ab_pp1ab R6138L 1.00e+0 BA.2.78
V311 620G>T missense_variant ORF1ab_pp1a R207L 1.00e+0 BA.2.78
V3115 18481G>T missense_variant ORF1ab_pp1ab V6161F 1.00e+0 BA.2.78
V3130 18625G>T stop_gained ORF1ab_pp1ab E6209* 1.00e+0 BA.2.78
V3135 18641G>T missense_variant ORF1ab_pp1ab R6214L 1.00e+0 BA.2.78
V3187 18943G>T missense_variant ORF1ab_pp1ab D6315Y 9.88e-1 BA.2.78
V321 649G>T stop_gained ORF1ab_pp1a E217* 1.00e+0 BA.2.78
V3216 19202G>T missense_variant ORF1ab_pp1ab R6401L 9.88e-1 BA.2.78
V3220 19261G>T missense_variant ORF1ab_pp1ab D6421Y 9.88e-1 BA.2.78
V3254 19538G>T missense_variant ORF1ab_pp1ab R6513L 1.00e+0 BA.2.78
V3293 19769G>T missense_variant ORF1ab_pp1ab R6590L 1.00e+0 BA.2.78
V3310 19870G>T missense_variant ORF1ab_pp1ab V6624L 1.00e+0 BA.2.78
V332 695G>T missense_variant ORF1ab_pp1a R232L 1.00e+0 BA.2.78
V3331 20027G>T missense_variant ORF1ab_pp1ab R6676L 1.00e+0 BA.2.78
V3334 20053G>T stop_gained ORF1ab_pp1ab E6685* 1.00e+0 BA.2.78
V3338 20062G>T missense_variant ORF1ab_pp1ab V6688F 1.00e+0 BA.2.78
V3345 20126G>T missense_variant ORF1ab_pp1ab R6709L 1.00e+0 BA.2.78
V336 731G>T missense_variant ORF1ab_pp1a R244L 1.00e+0 BA.2.78
V3415 20527G>T missense_variant ORF1ab_pp1ab A6843S 1.00e+0 BA.2.78
V3428 20683G>T missense_variant ORF1ab_pp1ab D6895Y 1.00e+0 BA.2.78
V3444 20791G>T missense_variant ORF1ab_pp1ab D6931Y 1.00e+0 BA.2.78
V3462 20893G>T missense_variant ORF1ab_pp1ab V6965L 1.00e+0 BA.2.78
V3475 20956G>T missense_variant ORF1ab_pp1ab A6986S 1.00e+0 BA.2.78
V3487 21041G>T missense_variant ORF1ab_pp1ab R7014L 1.00e+0 BA.2.78
V3488 21043G>T stop_gained ORF1ab_pp1ab E7015* 1.00e+0 BA.2.78
V3517 -5G>T upstream_gene_variant S None 1.00e+0 BA.2.78
V3562 101G>T missense_variant S R34L 9.62e-1 BA.2.78
V3621 367G>T missense_variant S A123S 9.75e-1 BA.2.78
V3635 425G>A missense_variant S G142D -7.58e-1 BA.2.78
V370 902G>T missense_variant ORF1ab_pp1a R301L 1.00e+0 BA.2.78
V3737 641G>T missense_variant S R214L 1.00e+0 BA.2.78
V38 -114G>T upstream_gene_variant ORF1ab_pp1a None 8.98e-1 BA.2.78
V3822 1030G>T missense_variant S A344S 9.37e-1 BA.2.78
V3844 1126A>G missense_variant S T376A -7.47e-1 BA.2.78
V3857 1231G>T missense_variant S A411S 9.24e-1 BA.2.78
V3922 1478A>G missense_variant S Q493R -6.37e-1 BA.2.78
V3923 1478A>T missense_variant S Q493L 7.88e-1 BA.2.78
V3926 1493A>G missense_variant S Q498R -6.37e-1 BA.2.78
V3959 1730G>T missense_variant S R577L 9.88e-1 BA.2.78
V396 1003G>T missense_variant ORF1ab_pp1a D335Y 1.00e+0 BA.2.78
V3985 1901G>T missense_variant S R634L 9.88e-1 BA.2.78
V3991 1937G>T missense_variant S R646L 9.88e-1 BA.2.78
V4005 2014G>T missense_variant S A672S 9.88e-1 BA.2.78
V401 1024G>T stop_gained ORF1ab_pp1a E342* 1.00e+0 BA.2.78
V4025 2045G>T missense_variant S R682L 9.88e-1 BA.2.78
V4026 2048G>T missense_variant S R683L 9.88e-1 BA.2.78
V4029 2054G>T missense_variant S R685L 9.88e-1 BA.2.78
V4065 2294G>T missense_variant S R765L 9.62e-1 BA.2.78
V41 -101G>T upstream_gene_variant ORF1ab_pp1a None 9.37e-1 BA.2.78
V4109 2569G>T missense_variant S G857C 1.00e+0 BA.2.78
V4150 2948G>T missense_variant S R983L 9.50e-1 BA.2.78
V4185 3272G>T missense_variant S R1091L 1.00e+0 BA.2.78
V4235 3554G>T missense_variant S R1185L 9.50e-1 BA.2.78
V4244 3595G>T missense_variant S D1199Y 9.88e-1 BA.2.78
V4289 3778G>T missense_variant S D1260Y 1.00e+0 BA.2.78
V4302 -6G>T upstream_gene_variant ORF3a None 1.00e+0 BA.2.78
V4345 89G>T missense_variant ORF3a R30L 1.00e+0 BA.2.78
V4347 91G>T missense_variant ORF3a A31S 1.00e+0 BA.2.78
V437 1156G>T stop_gained ORF1ab_pp1a E386* 1.00e+0 BA.2.78
V4379 130G>T stop_gained ORF3a G44* 1.00e+0 BA.2.78
V4391 148G>T missense_variant ORF3a V50F 1.00e+0 BA.2.78
V4410 175G>T missense_variant ORF3a A59S 1.00e+0 BA.2.78
V4459 289G>T missense_variant ORF3a V97F 1.00e+0 BA.2.78
V446 1193G>T missense_variant ORF1ab_pp1a R398L 1.00e+0 BA.2.78
V4512 401G>T missense_variant ORF3a R134L 1.00e+0 BA.2.78
V4524 463G>T missense_variant ORF3a D155Y 9.88e-1 BA.2.78
V453 1205G>T missense_variant ORF1ab_pp1a R402L 1.00e+0 BA.2.78
V4614 751G>T missense_variant ORF3a G251C 9.75e-1 BA.2.78
V4620 760G>T stop_gained ORF3a G254* 9.75e-1 BA.2.78
V464 1277G>T missense_variant ORF1ab_pp1a R426L 1.00e+0 BA.2.78
V4652 817G>T missense_variant ORF3a V273L 9.75e-1 BA.2.78
V4672 70G>T missense_variant E V24L 9.75e-1 BA.2.78
V4678 145G>T missense_variant E V49L 9.75e-1 BA.2.78
V4685 172G>T missense_variant E V58F 9.75e-1 BA.2.78
V4686 182G>T missense_variant E R61L 9.75e-1 BA.2.78
V469 1285G>T missense_variant ORF1ab_pp1a A429S 1.00e+0 BA.2.78
V4722 16G>T missense_variant M G6C 9.75e-1 BA.2.78
V4729 55C>G missense_variant M Q19E -7.23e-1 BA.2.78
V4757 232G>T missense_variant M G78C 9.24e-1 BA.2.78
V4763 247G>T missense_variant M A83S 9.24e-1 BA.2.78
V4772 320G>T missense_variant M R107L 9.24e-1 BA.2.78
V4782 473G>T missense_variant M R158L 8.98e-1 BA.2.78
V4784 521G>T missense_variant M R174L 9.24e-1 BA.2.78
V4788 593G>T missense_variant M R198L 9.37e-1 BA.2.78
V48 -92G>T upstream_gene_variant ORF1ab_pp1a None 9.50e-1 BA.2.78
V4800 13G>T missense_variant ORF6 V5F 9.62e-1 BA.2.78
V4812 59G>T missense_variant ORF6 R20M 9.75e-1 BA.2.78
V484 1330G>T stop_gained ORF1ab_pp1a E444* 1.00e+0 BA.2.78
V4844 -4G>T upstream_gene_variant ORF7a None 1.00e+0 BA.2.78
V4864 37G>T missense_variant ORF7a A13S 9.88e-1 BA.2.78
V4895 121G>T stop_gained ORF7a E41* 1.00e+0 BA.2.78
V4930 208G>T missense_variant ORF7a G70C 1.00e+0 BA.2.78
V4932 211G>T missense_variant ORF7a V71L 1.00e+0 BA.2.78
V4937 220G>T missense_variant ORF7a V74F 1.00e+0 BA.2.78
V4943 233G>T missense_variant ORF7a R78L 1.00e+0 BA.2.78
V5056 127G>T missense_variant ORF7b A43S 6.67e-1 BA.2.78
V5061 -4G>T upstream_gene_variant ORF8 None 6.67e-1 BA.2.78
V511 1420G>T missense_variant ORF1ab_pp1a A474S 1.00e+0 BA.2.78
V5144 184G>T missense_variant ORF8 V62L 8.17e-1 BA.2.78
V5173 223G>T missense_variant ORF8 D75Y 9.62e-1 BA.2.78
V5176 229G>T missense_variant ORF8 G77C 9.62e-1 BA.2.78
V5196 302G>T missense_variant ORF8 R101L 9.88e-1 BA.2.78
V5209 340G>T missense_variant ORF8 V114F 1.00e+0 BA.2.78
V5212 344G>T missense_variant ORF8 R115L 1.00e+0 BA.2.78
V5234 -12G>T upstream_gene_variant N None 1.00e+0 BA.2.78
V5266 29G>T missense_variant N R10L 1.00e+0 BA.2.78
V5277 41G>T missense_variant N R14L 1.00e+0 BA.2.78
V5324 107G>T missense_variant N R36L 1.00e+0 BA.2.78
V5331 119G>T missense_variant N R40L 1.00e+0 BA.2.78
V5333 122G>T missense_variant N R41L 1.00e+0 BA.2.78
V5337 163G>T missense_variant N A55S 9.88e-1 BA.2.78
V5345 203G>T missense_variant N R68L 1.00e+0 BA.2.78
V5349 214G>T missense_variant N V72F 1.00e+0 BA.2.78
V5355 263G>T missense_variant N R88L 1.00e+0 BA.2.78
V5359 278G>T missense_variant N R93L 1.00e+0 BA.2.78
V5361 284G>T missense_variant N R95L 1.00e+0 BA.2.78
V5364 295G>T missense_variant N G99C 1.00e+0 BA.2.78
V5379 385G>T missense_variant N G129C 1.00e+0 BA.2.78
V5395 446G>T missense_variant N R149L 1.00e+0 BA.2.78
V5404 472G>T missense_variant N V158L 1.00e+0 BA.2.78
V5414 517G>T missense_variant N A173S 1.00e+0 BA.2.78
V5419 535G>T missense_variant N G179C 1.00e+0 BA.2.78
V5429 554G>T missense_variant N R185L 1.00e+0 BA.2.78
V5434 566G>T missense_variant N R189L 1.00e+0 BA.2.78
V5437 572G>T missense_variant N R191L 1.00e+0 BA.2.78
V5467 611G>T missense_variant N G204V 9.88e-1 BA.2.78
V5496 643G>T missense_variant N G215C 1.00e+0 BA.2.78
V5536 776G>T missense_variant N R259L 1.00e+0 BA.2.78
V5537 785G>T missense_variant N R262L 1.00e+0 BA.2.78
V554 1625G>T missense_variant ORF1ab_pp1a R542L 1.00e+0 BA.2.78
V5546 823G>T missense_variant N G275C 1.00e+0 BA.2.78
V5547 830G>T missense_variant N R277L 1.00e+0 BA.2.78
V556 1634G>T missense_variant ORF1ab_pp1a R545L 1.00e+0 BA.2.78
V5565 931G>T missense_variant N A311S 1.00e+0 BA.2.78
V5566 946G>T stop_gained N G316* 1.00e+0 BA.2.78
V5570 956G>T missense_variant N R319L 1.00e+0 BA.2.78
V5594 1075G>T missense_variant N A359S 1.00e+0 BA.2.78
V563 1649G>T missense_variant ORF1ab_pp1a R550L 1.00e+0 BA.2.78
V5652 1238G>T missense_variant N S413I 9.88e-1 BA.2.78
V5688 16G>T missense_variant ORF10 V6F 9.75e-1 BA.2.78
V5690 22G>T missense_variant ORF10 A8S 9.75e-1 BA.2.78
V574 1679G>T missense_variant ORF1ab_pp1a R560L 1.00e+0 BA.2.78
V581 1696G>T missense_variant ORF1ab_pp1a A566S 1.00e+0 BA.2.78
V5875 222G>T synonymous_variant ORF1ab_pp1a S74S 1.00e+0 BA.2.78
V5970 726G>T synonymous_variant ORF1ab_pp1a T242T 1.00e+0 BA.2.78
V5998 921G>T synonymous_variant ORF1ab_pp1a A307A 1.00e+0 BA.2.78
V6010 999G>T synonymous_variant ORF1ab_pp1a T333T 1.00e+0 BA.2.78
V61 -68G>T upstream_gene_variant ORF1ab_pp1a None 9.75e-1 BA.2.78
V6121 1830G>T synonymous_variant ORF1ab_pp1a S610S 1.00e+0 BA.2.78
V6165 2133G>T synonymous_variant ORF1ab_pp1a T711T 1.00e+0 BA.2.78
V631 1879G>T missense_variant ORF1ab_pp1a V627F 1.00e+0 BA.2.78
V6413 3942G>T synonymous_variant ORF1ab_pp1a A1314A 1.00e+0 BA.2.78
V6420 3990G>T synonymous_variant ORF1ab_pp1a P1330P 9.88e-1 BA.2.78
V643 1933G>T missense_variant ORF1ab_pp1a G645C 1.00e+0 BA.2.78
V6481 4455G>T synonymous_variant ORF1ab_pp1a A1485A 9.75e-1 BA.2.78
V6521 4743G>T synonymous_variant ORF1ab_pp1a T1581T 1.00e+0 BA.2.78
V657 1981G>T missense_variant ORF1ab_pp1a G661C 1.00e+0 BA.2.78
V6610 5364G>T synonymous_variant ORF1ab_pp1a T1788T 1.00e+0 BA.2.78
V6634 5592G>T synonymous_variant ORF1ab_pp1a T1864T 1.00e+0 BA.2.78
V6686 6006G>T synonymous_variant ORF1ab_pp1a T2002T 1.00e+0 BA.2.78
V6695 6072G>T synonymous_variant ORF1ab_pp1a S2024S 1.00e+0 BA.2.78
V6704 6099G>T synonymous_variant ORF1ab_pp1a A2033A 1.00e+0 BA.2.78
V6765 6585G>T synonymous_variant ORF1ab_pp1a P2195P 1.00e+0 BA.2.78
V6830 7128G>T synonymous_variant ORF1ab_pp1a P2376P 1.00e+0 BA.2.78
V6859 7410G>T synonymous_variant ORF1ab_pp1a A2470A 1.00e+0 BA.2.78
V6890 7671G>T synonymous_variant ORF1ab_pp1a A2557A 1.00e+0 BA.2.78
V69 -62G>T upstream_gene_variant ORF1ab_pp1a None 9.62e-1 BA.2.78
V6900 7752G>T synonymous_variant ORF1ab_pp1a A2584A 1.00e+0 BA.2.78
V6908 7791G>T synonymous_variant ORF1ab_pp1a T2597T 1.00e+0 BA.2.78
V6950 8088G>T synonymous_variant ORF1ab_pp1a A2696A 9.88e-1 BA.2.78
V6952 8103G>T synonymous_variant ORF1ab_pp1a A2701A 9.88e-1 BA.2.78
V7125 9537G>T synonymous_variant ORF1ab_pp1a A3179A 1.00e+0 BA.2.78
V7140 9606G>T synonymous_variant ORF1ab_pp1a T3202T 1.00e+0 BA.2.78
V72 -58G>T upstream_gene_variant ORF1ab_pp1a None 9.75e-1 BA.2.78
V7246 10377G>T synonymous_variant ORF1ab_pp1a T3459T 1.00e+0 BA.2.78
V747 2359G>T missense_variant ORF1ab_pp1a G787W 1.00e+0 BA.2.78
V7480 12249G>T synonymous_variant ORF1ab_pp1a T4083T 1.00e+0 BA.2.78
V7502 12504G>T synonymous_variant ORF1ab_pp1a A4168A 9.88e-1 BA.2.78
V752 2374G>T stop_gained ORF1ab_pp1a E792* 1.00e+0 BA.2.78
V7559 12936G>T synonymous_variant ORF1ab_pp1a P4312P 9.88e-1 BA.2.78
V7567 12975G>T synonymous_variant ORF1ab_pp1a S4325S 9.88e-1 BA.2.78
V7602 13194G>T synonymous_variant ORF1ab_pp1a S4398S 9.88e-1 BA.2.78
V7604 13239G>T synonymous_variant ORF1ab_pp1ab P4413P 9.88e-1 BA.2.78
V762 2452G>T missense_variant ORF1ab_pp1a G818C 1.00e+0 BA.2.78
V7677 13854G>T synonymous_variant ORF1ab_pp1ab T4618T 1.00e+0 BA.2.78
V7699 14004G>T synonymous_variant ORF1ab_pp1ab T4668T 9.88e-1 BA.2.78
V7751 14358G>T synonymous_variant ORF1ab_pp1ab T4786T 1.00e+0 BA.2.78
V782 2593G>T missense_variant ORF1ab_pp1a G865C 9.75e-1 BA.2.78
V7846 15108G>T synonymous_variant ORF1ab_pp1ab T5036T 1.00e+0 BA.2.78
V7869 15279G>T synonymous_variant ORF1ab_pp1ab T5093T 1.00e+0 BA.2.78
V787 2614G>T missense_variant ORF1ab_pp1a A872S 9.62e-1 BA.2.78
V7951 15957G>T synonymous_variant ORF1ab_pp1ab P5319P 1.00e+0 BA.2.78
V7974 16113G>T synonymous_variant ORF1ab_pp1ab P5371P 1.00e+0 BA.2.78
V8011 16383G>T synonymous_variant ORF1ab_pp1ab T5461T 9.88e-1 BA.2.78
V81 -47G>T upstream_gene_variant ORF1ab_pp1a None 9.75e-1 BA.2.78
V8101 17070G>T synonymous_variant ORF1ab_pp1ab T5690T 9.75e-1 BA.2.78
V8145 17415G>T synonymous_variant ORF1ab_pp1ab T5805T 1.00e+0 BA.2.78
V8252 18198G>T synonymous_variant ORF1ab_pp1ab P6066P 1.00e+0 BA.2.78
V8296 18492G>T synonymous_variant ORF1ab_pp1ab P6164P 1.00e+0 BA.2.78
V8328 18696G>T synonymous_variant ORF1ab_pp1ab A6232A 9.88e-1 BA.2.78
V8388 19191G>T synonymous_variant ORF1ab_pp1ab T6397T 9.88e-1 BA.2.78
V8446 19698G>T synonymous_variant ORF1ab_pp1ab T6566T 1.00e+0 BA.2.78
V8502 20205G>T synonymous_variant ORF1ab_pp1ab A6735A 1.00e+0 BA.2.78
V8519 20406G>T synonymous_variant ORF1ab_pp1ab A6802A 1.00e+0 BA.2.78
V8521 20415G>T synonymous_variant ORF1ab_pp1ab P6805P 1.00e+0 BA.2.78
V8547 20667G>T synonymous_variant ORF1ab_pp1ab T6889T 1.00e+0 BA.2.78
V8549 20673G>T synonymous_variant ORF1ab_pp1ab T6891T 1.00e+0 BA.2.78
V8592 20991G>T synonymous_variant ORF1ab_pp1ab A6997A 1.00e+0 BA.2.78
V8678 336G>T synonymous_variant S S112S 9.75e-1 BA.2.78
V8698 489G>T synonymous_variant S A163A 1.00e+0 BA.2.78
V8711 624G>T synonymous_variant S T208T 1.00e+0 BA.2.78
V8721 663G>T synonymous_variant S S221S 1.00e+0 BA.2.78
V8749 906G>T synonymous_variant S T302T 9.62e-1 BA.2.78
V882 2977G>T missense_variant ORF1ab_pp1a G993C 1.00e+0 BA.2.78
V8973 2637G>T synonymous_variant S A879A 9.50e-1 BA.2.78
V9003 2883G>T synonymous_variant S T961T 1.00e+0 BA.2.78
V9076 3438C>T synonymous_variant S D1146D -8.35e-1 BA.2.78
V9151 102G>T synonymous_variant ORF3a T34T 1.00e+0 BA.2.78
V9154 108G>T synonymous_variant ORF3a P36P 1.00e+0 BA.2.78
V9253 801G>T synonymous_variant ORF3a P267P 9.75e-1 BA.2.78
V9254 804G>T synonymous_variant ORF3a T268T 9.75e-1 BA.2.78
V9256 807G>T synonymous_variant ORF3a T269T 9.75e-1 BA.2.78
V9262 18G>T synonymous_variant E S6S 9.75e-1 BA.2.78
V9274 108G>T synonymous_variant E A36A 9.75e-1 BA.2.78
V9330 312G>T synonymous_variant M A104A 9.24e-1 BA.2.78
V9332 318G>T synonymous_variant M T106T 9.24e-1 BA.2.78
V9351 396G>T synonymous_variant M P132P 8.62e-1 BA.2.78
V9376 525G>T synonymous_variant M T175T 9.24e-1 BA.2.78
V9381 552G>T synonymous_variant M S184S 9.37e-1 BA.2.78
V9480 315G>T synonymous_variant ORF7a A105A 1.00e+0 BA.2.78
V9523 108G>T synonymous_variant ORF8 P36P 7.28e-1 BA.2.78
V9550 309G>T synonymous_variant ORF8 S103S 1.00e+0 BA.2.78
V9568 48G>T synonymous_variant N T16T 1.00e+0 BA.2.78
V9582 105G>T synonymous_variant N A35A 1.00e+0 BA.2.78
V9596 150G>T synonymous_variant N A50A 1.00e+0 BA.2.78
V9744 906G>T synonymous_variant N P302P 9.88e-1 BA.2.78
V9753 939G>T synonymous_variant N A313A 1.00e+0 BA.2.78
V9758 954G>T synonymous_variant N S318S 1.00e+0 BA.2.78
V9764 981G>T synonymous_variant N S327S 1.00e+0 BA.2.78
V9766 987G>T synonymous_variant N T329T 1.00e+0 BA.2.78
V978 3319G>T stop_gained ORF1ab_pp1a G1107* 1.00e+0 BA.2.78
V9797 1149G>T synonymous_variant N P383P 1.00e+0 BA.2.78
V9824 30G>T synonymous_variant ORF10 P10P 9.75e-1 BA.2.78
V9825 36G>T synonymous_variant ORF10 T12T 9.75e-1 BA.2.78
V988 3355G>T missense_variant ORF1ab_pp1a G1119C 1.00e+0 BA.2.78





Manual curation of mutation (5776G>T)-related literature from PubMed

The pubmed.mineR and pubmed-mapper were utilized for extracting literature from PubMed, followed by manual filtering.
Note: PubMed: (COVID-19 [Title/Abstract] OR SARS-COV-2 [Title/Abstract]) AND (DNA mutation [Title/Abstract] OR Protein mutation-1 letter [Title/Abstract] OR Protein mutation-3 letter [Title/Abstract]).

DNA level Protein level Paper title Journal name Publication year Pubmed ID