Browsing Mutation Sites on Lineage BA.2.45


Overview of the global distribution of genome sequences on lineage BA.2.45.
Note: Color representation of genome sequence counts.



The temporal dynamics of genome sequence count within lineage BA.2.45.
Note: Clicking the "Count" or "Cumulative Count" button toggles the view. Count represents the number of genome sequences per month. Cumulative count represents the accumulated total count up to that month.




Mutation table of lineage BA.2.45.
Note: Click on the mutation ID in the table to retrieve the complete annotation information for that mutation.

Mutation ID Lineage name Mutation frequency Gene ID Gene name Genome position DNA mutation Mutation type Protein mutation-1 letter Protein mutation-3 letter
V2595 BA.2.45 1.00e+0 GU280_gp01_pp1ab ORF1ab_pp1ab 14408 14144C>T missense_variant P4715L Pro4715Leu
V457 BA.2.45 3.06e-2 GU280_gp01_pp1a ORF1ab_pp1a 1483 1218T>A missense_variant F406L Phe406Leu
V2645 BA.2.45 2.36e-2 GU280_gp01_pp1ab ORF1ab_pp1ab 15002 14738A>G missense_variant Y4913C Tyr4913Cys
V2918 BA.2.45 9.98e-1 GU280_gp01_pp1ab ORF1ab_pp1ab 17410 17146C>T missense_variant R5716C Arg5716Cys
V527 BA.2.45 1.77e-2 GU280_gp01_pp1a ORF1ab_pp1a 1800 1535C>T missense_variant T512I Thr512Ile
V3015 BA.2.45 9.95e-1 GU280_gp01_pp1ab ORF1ab_pp1ab 18163 17899A>G missense_variant I5967V Ile5967Val
V3051 BA.2.45 4.95e-2 GU280_gp01_pp1ab ORF1ab_pp1ab 18326 18062C>T missense_variant A6021V Ala6021Val
V1982 BA.2.45 9.95e-1 GU280_gp01_pp1a ORF1ab_pp1a 10029 9764C>T missense_variant T3255I Thr3255Ile
V3273 BA.2.45 9.89e-1 GU280_gp01_pp1ab ORF1ab_pp1ab 19955 19691C>T missense_variant T6564I Thr6564Ile
V601 BA.2.45 3.77e-2 GU280_gp01_pp1a ORF1ab_pp1a 2035 1770G>T missense_variant L590F Leu590Phe
V3423 BA.2.45 1.41e-2 GU280_gp01_pp1ab ORF1ab_pp1ab 20930 20666C>T missense_variant T6889M Thr6889Met
V3520 BA.2.45 2.83e-2 GU280_gp02 S 21575 13C>T missense_variant L5F Leu5Phe
V3534 BA.2.45 6.24e-1 GU280_gp02 S 21618 56C>T missense_variant T19I Thr19Ile
V3544 BA.2.45 3.96e-1 GU280_gp02 S 21632 71_79delTACCCCCTG disruptive_inframe_deletion L24_A27delinsS Leu24_Ala27delinsSer
V3547 BA.2.45 2.71e-2 GU280_gp02 S 21633 71T>C missense_variant L24S Leu24Ser
V3555 BA.2.45 2.94e-2 GU280_gp02 S 21641 79G>T missense_variant A27S Ala27Ser
V3635 BA.2.45 9.76e-1 GU280_gp02 S 21987 425G>A missense_variant G142D Gly142Asp
V3682 BA.2.45 2.23e-1 GU280_gp02 S 22088 526C>T missense_variant L176F Leu176Phe
V3735 BA.2.45 9.91e-1 GU280_gp02 S 22200 638T>G missense_variant V213G Val213Gly
V2163 BA.2.45 8.08e-1 GU280_gp01_pp1a ORF1ab_pp1a 11287 11023_11031delTCTGGTTTT conservative_inframe_deletion S3675_F3677del Ser3675_Phe3677del
V2165 BA.2.45 3.07e-1 GU280_gp01_pp1a ORF1ab_pp1a 11288 11023T>A missense_variant S3675T Ser3675Thr
V2167 BA.2.45 1.38e-1 GU280_gp01_pp1a ORF1ab_pp1a 11291 11026G>A missense_variant G3676S Gly3676Ser
V2169 BA.2.45 4.31e-1 GU280_gp01_pp1a ORF1ab_pp1a 11296 11031T>G missense_variant F3677L Phe3677Leu
V3820 BA.2.45 8.96e-1 GU280_gp02 S 22578 1016G>A missense_variant G339D Gly339Asp
V3840 BA.2.45 4.57e-1 GU280_gp02 S 22674 1112C>T missense_variant S371F Ser371Phe
V3841 BA.2.45 4.51e-1 GU280_gp02 S 22679 1117T>C missense_variant S373P Ser373Pro
V3843 BA.2.45 4.42e-1 GU280_gp02 S 22686 1124C>T missense_variant S375F Ser375Phe
V3844 BA.2.45 4.42e-1 GU280_gp02 S 22688 1126A>G missense_variant T376A Thr376Ala
V3851 BA.2.45 4.28e-1 GU280_gp02 S 22775 1213G>A missense_variant D405N Asp405Asn
V3854 BA.2.45 4.26e-1 GU280_gp02 S 22786 1224A>C missense_variant R408S Arg408Ser
V3861 BA.2.45 4.17e-1 GU280_gp02 S 22813 1251G>T missense_variant K417N Lys417Asn
V3868 BA.2.45 3.83e-1 GU280_gp02 S 22882 1320T>G missense_variant N440K Asn440Lys
V3881 BA.2.45 4.16e-1 GU280_gp02 S 22907 1345T>C missense_variant Y449H Tyr449His
V3896 BA.2.45 4.23e-1 GU280_gp02 S 22992 1430G>A missense_variant S477N Ser477Asn
V3900 BA.2.45 4.24e-1 GU280_gp02 S 22995 1433C>A missense_variant T478K Thr478Lys
V3911 BA.2.45 4.25e-1 GU280_gp02 S 23013 1451A>C missense_variant E484A Glu484Ala
V3922 BA.2.45 4.24e-1 GU280_gp02 S 23040 1478A>G missense_variant Q493R Gln493Arg
V3926 BA.2.45 4.24e-1 GU280_gp02 S 23055 1493A>G missense_variant Q498R Gln498Arg
V3927 BA.2.45 4.24e-1 GU280_gp02 S 23063 1501A>T missense_variant N501Y Asn501Tyr
V3930 BA.2.45 4.28e-1 GU280_gp02 S 23075 1513T>C missense_variant Y505H Tyr505His
V3969 BA.2.45 9.99e-1 GU280_gp02 S 23403 1841A>G missense_variant D614G Asp614Gly
V3997 BA.2.45 9.98e-1 GU280_gp02 S 23525 1963C>T missense_variant H655Y His655Tyr
V4019 BA.2.45 9.95e-1 GU280_gp02 S 23599 2037T>G missense_variant N679K Asn679Lys
V4022 BA.2.45 9.95e-1 GU280_gp02 S 23604 2042C>A missense_variant P681H Pro681His
V4063 BA.2.45 9.89e-1 GU280_gp02 S 23854 2292C>A missense_variant N764K Asn764Lys
V4079 BA.2.45 9.99e-1 GU280_gp02 S 23948 2386G>T missense_variant D796Y Asp796Tyr
V97 BA.2.45 9.22e-1 GU280_gp01_pp1a ORF1ab_pp1a 241 -25C>T upstream_gene_variant None None
V4144 BA.2.45 9.99e-1 GU280_gp02 S 24424 2862A>T missense_variant Q954H Gln954His
V4146 BA.2.45 9.99e-1 GU280_gp02 S 24469 2907T>A missense_variant N969K Asn969Lys
V4355 BA.2.45 2.94e-2 GU280_gp03 ORF3a 25496 104T>C missense_variant I35T Ile35Thr
V4524 BA.2.45 2.94e-2 GU280_gp03 ORF3a 25855 463G>T missense_variant D155Y Asp155Tyr
V4596 BA.2.45 9.95e-1 GU280_gp03 ORF3a 26060 668C>T missense_variant T223I Thr223Ile
V4663 BA.2.45 9.95e-1 GU280_gp04 E 26270 26C>T missense_variant T9I Thr9Ile
V4729 BA.2.45 9.23e-1 GU280_gp05 M 26577 55C>G missense_variant Q19E Gln19Glu
V4742 BA.2.45 9.92e-1 GU280_gp05 M 26709 187G>A missense_variant A63T Ala63Thr
V4839 BA.2.45 9.01e-1 GU280_gp06 ORF6 27382 181G>C missense_variant D61H Asp61His
V4841 BA.2.45 9.01e-1 GU280_gp06 ORF6 27383 182A>T missense_variant D61V Asp61Val
V4986 BA.2.45 4.24e-2 GU280_gp07 ORF7a 27707 314C>T missense_variant A105V Ala105Val
V5055 BA.2.45 1.06e-2 GU280_gp08 ORF7b 27882 127G>A missense_variant A43T Ala43Thr
V773 BA.2.45 9.93e-1 GU280_gp01_pp1a ORF1ab_pp1a 2790 2525C>T missense_variant T842I Thr842Ile
V5241 BA.2.45 9.93e-1 GU280_gp10 N 28271 -3A>T upstream_gene_variant None None
V5274 BA.2.45 9.52e-1 GU280_gp10 N 28311 38C>T missense_variant P13L Pro13Leu
V5305 BA.2.45 8.59e-1 GU280_gp10 N 28361 90_98delAGAACGCAG disruptive_inframe_deletion E31_S33del Glu31_Ser33del
V5313 BA.2.45 3.30e-2 GU280_gp10 N 28370 97A>G missense_variant S33G Ser33Gly
V5461 BA.2.45 9.89e-1 GU280_gp10 N 28881 608G>A missense_variant R203K Arg203Lys
V5465 BA.2.45 9.89e-1 GU280_gp10 N 28883 610G>C missense_variant G204R Gly204Arg
V2342 BA.2.45 3.42e-2 GU280_gp01_pp1a ORF1ab_pp1a 12534 12269C>T missense_variant T4090I Thr4090Ile
V5651 BA.2.45 9.84e-1 GU280_gp10 N 29510 1237A>C missense_variant S413R Ser413Arg
V5758 BA.2.45 1.77e-1 GU280_gp02 S 29733 *4350_*4375delGAGGCCACGCGGAGTACGATCGAGTG downstream_gene_variant None None
V5762 BA.2.45 1.53e-2 GU280_gp02 S 29734 *4350G>T downstream_gene_variant None None
V852 BA.2.45 2.59e-2 GU280_gp01_pp1a ORF1ab_pp1a 3140 2875C>T missense_variant P959S Pro959Ser
V2366 BA.2.45 1.18e-2 GU280_gp01_pp1a ORF1ab_pp1a 12741 12476C>T missense_variant T4159I Thr4159Ile
V1057 BA.2.45 3.06e-2 GU280_gp01_pp1a ORF1ab_pp1a 3902 3637C>T missense_variant P1213S Pro1213Ser
V1114 BA.2.45 9.94e-1 GU280_gp01_pp1a ORF1ab_pp1a 4184 3919G>A missense_variant G1307S Gly1307Ser
V6 BA.2.45 4.04e-1 GU280_gp01_pp1a ORF1ab_pp1a 44 -222C>T upstream_gene_variant None None
V184 BA.2.45 1.06e-2 GU280_gp01_pp1a ORF1ab_pp1a 509 245_253delGTCATGTTA disruptive_inframe_deletion G82_M85delinsV Gly82_Met85delinsVal
V249 BA.2.45 9.95e-1 GU280_gp01_pp1a ORF1ab_pp1a 670 405T>G missense_variant S135R Ser135Arg
V260 BA.2.45 1.06e-2 GU280_gp01_pp1a ORF1ab_pp1a 685 421_429delAAGTCATTT conservative_inframe_deletion K141_F143del Lys141_Phe143del
V1907 BA.2.45 9.63e-1 GU280_gp01_pp1a ORF1ab_pp1a 9344 9079C>T missense_variant L3027F Leu3027Phe
V1937 BA.2.45 9.86e-1 GU280_gp01_pp1a ORF1ab_pp1a 9534 9269C>T missense_variant T3090I Thr3090Ile
V1969 BA.2.45 9.96e-1 GU280_gp01_pp1a ORF1ab_pp1a 9866 9601C>T missense_variant L3201F Leu3201Phe
V2037 BA.2.45 9.72e-1 GU280_gp01_pp1a ORF1ab_pp1a 10449 10184C>A missense_variant P3395H Pro3395His
V6265 BA.2.45 9.98e-1 GU280_gp01_pp1a ORF1ab_pp1a 3037 2772C>T synonymous_variant F924F Phe924Phe
V6426 BA.2.45 9.68e-1 GU280_gp01_pp1a ORF1ab_pp1a 4321 4056C>T synonymous_variant A1352A Ala1352Ala
V7082 BA.2.45 9.60e-1 GU280_gp01_pp1a ORF1ab_pp1a 9424 9159A>G synonymous_variant V3053V Val3053Val
V7084 BA.2.45 9.54e-1 GU280_gp01_pp1a ORF1ab_pp1a 9430 9165C>T synonymous_variant I3055I Ile3055Ile
V7193 BA.2.45 9.67e-1 GU280_gp01_pp1a ORF1ab_pp1a 10198 9933C>T synonymous_variant D3311D Asp3311Asp
V7219 BA.2.45 9.71e-1 GU280_gp01_pp1a ORF1ab_pp1a 10447 10182G>A synonymous_variant R3394R Arg3394Arg
V7520 BA.2.45 9.99e-1 GU280_gp01_pp1a ORF1ab_pp1a 12880 12615C>T synonymous_variant I4205I Ile4205Ile
V7888 BA.2.45 1.00e+0 GU280_gp01_pp1ab ORF1ab_pp1ab 15714 15450C>T synonymous_variant L5150L Leu5150Leu
V8457 BA.2.45 9.85e-1 GU280_gp01_pp1ab ORF1ab_pp1ab 20055 19791A>G synonymous_variant E6597E Glu6597Glu
V8786 BA.2.45 4.23e-1 GU280_gp02 S 22792 1230C>T synonymous_variant I410I Ile410Ile
V9076 BA.2.45 9.79e-1 GU280_gp02 S 25000 3438C>T synonymous_variant D1146D Asp1146Asp
V9171 BA.2.45 9.91e-1 GU280_gp03 ORF3a 25584 192C>T synonymous_variant T64T Thr64Thr
V9334 BA.2.45 9.92e-1 GU280_gp05 M 26858 336C>T synonymous_variant F112F Phe112Phe
V9401 BA.2.45 9.80e-1 GU280_gp06 ORF6 27259 58A>C synonymous_variant R20R Arg20Arg
V9418 BA.2.45 9.01e-1 GU280_gp06 ORF6 27384 183T>C synonymous_variant D61D Asp61Asp
V9496 BA.2.45 9.53e-1 GU280_gp08 ORF7b 27807 52C>T synonymous_variant L18L Leu18Leu
V9576 BA.2.45 3.30e-2 GU280_gp10 N 28363 90A>T synonymous_variant G30G Gly30Gly
V9682 BA.2.45 9.89e-1 GU280_gp10 N 28882 609G>A synonymous_variant R203R Arg203Arg
V7241 BA.2.45 1.30e-2 GU280_gp01_pp1a ORF1ab_pp1a 10615 10350C>T synonymous_variant D3450D Asp3450Asp
V9046 BA.2.45 1.41e-1 GU280_gp02 S 24796 3234T>C synonymous_variant A1078A Ala1078Ala
V9494 BA.2.45 1.39e-1 GU280_gp08 ORF7b 27804 49C>T synonymous_variant L17L Leu17Leu
V9657 BA.2.45 1.87e-1 GU280_gp10 N 28748 475C>T synonymous_variant L159L Leu159Leu
V5937 BA.2.45 1.18e-2 GU280_gp01_pp1a ORF1ab_pp1a 823 558C>T synonymous_variant V186V Val186Val
V6212 BA.2.45 4.83e-2 GU280_gp01_pp1a ORF1ab_pp1a 2668 2403C>T synonymous_variant A801A Ala801Ala
V8946 BA.2.45 7.18e-2 GU280_gp02 S 24034 2472C>T synonymous_variant N824N Asn824Asn
V8144 BA.2.45 9.42e-2 GU280_gp01_pp1ab ORF1ab_pp1ab 17676 17412C>T synonymous_variant I5804I Ile5804Ile
V9304 BA.2.45 1.88e-2 GU280_gp05 M 26681 159C>T synonymous_variant F53F Phe53Phe
V7052 BA.2.45 2.00e-2 GU280_gp01_pp1a ORF1ab_pp1a 9166 8901C>T synonymous_variant T2967T Thr2967Thr
V7744 BA.2.45 1.65e-2 GU280_gp01_pp1ab ORF1ab_pp1ab 14599 14335C>T synonymous_variant L4779L Leu4779Leu
V8567 BA.2.45 1.41e-2 GU280_gp01_pp1ab ORF1ab_pp1ab 21108 20844C>T synonymous_variant F6948F Phe6948Phe
V8834 BA.2.45 1.88e-2 GU280_gp02 S 23185 1623C>T synonymous_variant F541F Phe541Phe
V9176 BA.2.45 3.53e-2 GU280_gp03 ORF3a 25614 222C>T synonymous_variant S74S Ser74Ser
V6064 BA.2.45 1.77e-2 GU280_gp01_pp1a ORF1ab_pp1a 1684 1419C>T synonymous_variant I473I Ile473Ile
V8294 BA.2.45 3.53e-2 GU280_gp01_pp1ab ORF1ab_pp1ab 18750 18486T>C synonymous_variant Y6162Y Tyr6162Tyr
V7382 BA.2.45 1.41e-2 GU280_gp01_pp1a ORF1ab_pp1a 11824 11559C>T synonymous_variant I3853I Ile3853Ile
V9433 BA.2.45 1.65e-2 GU280_gp07 ORF7a 27501 108T>C synonymous_variant S36S Ser36Ser
V7496 BA.2.45 1.18e-2 GU280_gp01_pp1a ORF1ab_pp1a 12733 12468C>T synonymous_variant A4156A Ala4156Ala
V9463 BA.2.45 1.65e-2 GU280_gp07 ORF7a 27630 237C>T synonymous_variant A79A Ala79Ala
V8127 BA.2.45 1.53e-2 GU280_gp01_pp1ab ORF1ab_pp1ab 17502 17238C>T synonymous_variant F5746F Phe5746Phe
V8927 BA.2.45 1.30e-2 GU280_gp02 S 23896 2334C>T synonymous_variant T778T Thr778Thr
V6892 BA.2.45 1.06e-2 GU280_gp01_pp1a ORF1ab_pp1a 7948 7683C>T synonymous_variant Y2561Y Tyr2561Tyr
V8441 BA.2.45 1.06e-2 GU280_gp01_pp1ab ORF1ab_pp1ab 19935 19671T>C synonymous_variant T6557T Thr6557Thr